Gene Query: CAPNS1

Dataset Description Geneva Score
A role for ZNF598 in post-transcriptional gene regulation 49.87
A novel lncRNA GAS1 promotes gastric carcinogenesis and acts as a modular scaffold of WDR5 and KAT2A complexes to specify the histone modification pattern [RNA-seq] 38.22
ChIP-seq and RNA-seq in BGC823 cells after downregulation of GAS1 expression 38.22
Gene target specificity of the Super Elongation Complex (SEC) family: How HIV-1 Tat employs selected SEC members to activate viral transcription 35.74
NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements 31.28
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 30.27
Gene expression profile of human iPSC-derived nephron progenitor cells 28.73
Limiting cholesterol biosynthetic flux engages type I IFN signaling in a STING-dependent manner 25.71
Gene expression changes after LOC550643 silencing 25.08
RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected EVT cells 24.18
Differential expression of genes in HCMV-infected fibroblasts regulated by the purinergic receptor P2Y2. 24.17
Genome-wide expression profiling of an in vitro model for studying esophageal epithelial differentiation 22.71
Single-cell RNA-Seq Investigation of Foveal and Peripheral Expression in the Human Retina 22.59
DHX36 is the missing link to understand RNA G-quadruplex structures, mRNA stability, and translation [RNA-seq] 22.37
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex 21.92
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing [RNA-Seq] 21.9
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing 21.9
Detection of internal N7-methylguanosine (m7G) RNA modifications by mutational profiling sequencing 21.66
O-glcnAc reprograms cellular energetics 21.59
XPO1 inhibition antagonizes MCL via nuclear retention of IkB: Selinexor demonstrates antitumor activities in both ibr-sensitive and ibr-resistant tumor cells 21.55
Differential expression of genes in AD169-infected MRC5. 21.51
RNA-dependent RNA polymerase sequence specificities of capsnatching viruses are tailored to aid viral replication 21.45
Genome-wide CRISPR-Cas9 screen identifies druggable synthetic lethality between LSD1 and MTORC1 in MLL-translocated AML 20.93
Integrative classification of human coding and non-coding genes based on RNA metabolism profiles 20.44
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 19.66
MPTAC determines APP fragmentation via sensing sulfur amino acid catabolism 19.1
Genome-wide analysis of herpes simplex virus type 1 (HSV-1) infected cells 18.44
DART-seq: an antibody-free method for global m6A detection 17.8
RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells. 17.64
SLAM-seq for K562 endogenous mRNA decay 17.28
Transcriptome Analysis of PBMCs in peripheral blood of patients with hepatocellular carcinoma 17.13
Regulators of cellular heterogeneity in basal-like breast cancer influence symmetric versus asymmetric division rates (shRNA targeting) 17.06
RNA-sequencing of human mammary epithelial cells (HMLEs) transduced in vitro with a shRNA against SOX4 or a scrambled shRNA in untreated and TGF-β-treated (16 hours) conditions 16.72
Biochemical fractionation of HEK293 nuclei and RNA-seq of chromatin-associated and soluble-nuclear RNA 16.7
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq] 16.34
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification 16.34
RNA-sequencing of formalin fixed human primary melanoma tissue 15.99
RNA-seq of overgrown interscapular adipose tissue with biallelic MFN2 mutations 15.76
An RNA-centric dissection of host complexes controlling flavivirus infection [RNA-Seq] 15.73
An RNA-centric dissection of host complexes controlling flavivirus infection 15.73
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 15.68
Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 15.54
Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 [RNA-seq] 15.54
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT and labelled with 4SU 15.4
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT, U0126, CYHX, ActD, EGF, FGF, or IGF and labelled with 4SU 15.4
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [ZNF787] 15.21
Human co-transcriptional splicing kinetics and coordination revealed by direct nascent RNA sequencing 15.09
Impact of dieldrin on transcription in Jurkat T cells 14.97
Transcriptome-wide study of the response of human trabecular meshwork cells to the substrate stiffness increase 14.84
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium 14.82
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium [RNA-Seq] 14.82
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 14.76
High-throughput sequencing of pluripotent cells 14.69
RNAseq to determine gene expression changes following depletion of SETDB1 in THP-1 AML Cells 14.57
A rare subpopulation of melanoma cells with low expression of metastasis suppressor NME1 has a neural crest-like phenotype and is highly metastatic in vivo 14.42
The human blood-nerve barrier transcriptome 14.29
Transcriptome analysis of reticulated platelets reveals a prothrombotic profile [mRNA-Seq] 14.23
Transcriptome analysis of reticulated platelets reveals a prothrombotic profile 14.23
mRNA expression profile of Lymphocytes 14.12
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 14.04
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition [RNA-Seq] 13.97
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition 13.97
Generation of induced neural stem cells from urine derived cells by synthetic mRNA 13.86
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes 13.76
Uridilation by TUT4/7 restricts retrotransposition of human Line-1s 13.57
HITS-CLIP analysis uncovers a link between the Kaposi's sarcoma associated herpesvirus ORF57 protein and host pre-mRNA metabolism 13.51
RNA m5C Methylation in breast cancer using MeRIP-Seq 13.18
Mitochondrial hypoxic stress induces RNA editing by APOBEC3G in lymphocytes 13.15
3’ Uridylation Expands miRNA Target Repertoire 13.08
mRNA sequencing of the mouse and human Hep-Orgs, Chol-Orgs and primary hepatocytes 13.08
Differential roles of human PUS10 in miRNA processing and tRNA pseudouridylation 13.07
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α 13.03
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq) 12.91
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages 12.91
NRDE2 negatively regulates nuclear exosome functions 12.84
Browning of human adipocytes requires KLF11 and reprogramming of PPARγ super-enhancers 12.77
Self-organized amniogenesis by human pluripotent stem cells in a biomimetic implantation-like niche 12.5
RNAseq analysis of the human neutrophil transcriptome, with and without in vitro cytokine stimulation 12.47
Mitochondrial dsRNA triggers antiviral signalling in humans 12.43
Direct identification of endogenous SMG6 targets and a preferred motif spanning SMG6 cleavage sites by parallel analysis of RNA ends in human cells 12.38
TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. 12.34
Uridylation-mediated RNA quality control pathway in mammalian cytoplasm [RNA-Seq] 12.34
Human lymph nodes maintain a unique subset of resident memory T cells with high functional potential important for protective immunity and immunotherapies 11.91
Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes 11.91
Integrating single-cell transcriptomic data across different conditions, technologies, and species 11.88
Human cells contain natural double-stranded RNAs with potential regulatory capacity 11.85
K562 polyA RNA-Seq 11.8
Global Bidirectional Transcription of the Epstein-Barr Virus Genome During Reactivation 11.72
Expression data for KDM1B knockdown in Glioma-Initiating Cells (GICs) 11.6
Loss of the Chr16p11.2 candidate gene QPRT leads to aberrant neuronal differentiation 11.6
Large-scale profiling of intracellular signalling pathway activation reveals major distinctions between airway smooth muscle cells of asthmatics and non-asthmatics. 11.49
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes 11.32
Hypoxic regulation of transcription in HUVEC is mediated by EPAS1 11.02
Heterozygous p53-R280T mutation promotes proliferation of NPC cells through activating PI3K/Akt signaling pathway 10.88
Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs 10.85
Base-resolution mapping reveals distinct classes of N1-methyladenosine methylome in nuclear- and mitochondrial-encoded transcripts 10.58
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 10.53
CD95/Fas ligand mRNA is toxic to cells 10.51
Unique features and clinical importance of acute alloreactive immune responses 10.4
Treatment Paradigms for Retinal and Macular Diseases Using 3-D Retina Cultures Derived From Human Reporter Pluripotent Stem Cell Lines 10.32
Analysis of transcriptome changes following SOX2 knockdown in three different Ewing sarcoma cell lines 10.3
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [d7+d14] 10.13
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 10.05
RNA-seq of YB5 cells treated with Proscillaridin A 9.85
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice 9.79
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] 9.79
Measuring the effect of MYC on transcription during the DNA double-strand break response by RNA-seq of newly synthesized transcripts 9.77
Comparative total RNA and mRNA sequencing and systems analysis reveals nascent transcriptional response to early HIV-1 infection in a CD4+ T cell line 9.77
Effect of BMP inhibition or stimulation of primary human keratinocytes 9.77
Single-cell ID-seq identifies BMP signaling as a driver of a late stage epidermal differentiation program. 9.77
A novel Menin-MLL inhibitor induces specific chromatin changes and eradicates disease in models of MLL-rearranged leukemia [RNA-Seq II] 9.74
Differential analysis of HOXA1 in adult cells at isoform resolution by RNA-Seq [Illumina] 9.74
Differential analysis of gene regulation at transcript resolution by RNA-Seq 9.74
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 9.73
T47D RNA-seq and ChrRNA-seq data 9.73
Effects of Freeze-Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression 9.69
Role of XRN2 ribonucleolytic activity in RNA metabolism 9.66
Human iPSC-derived cells and microengineered Organ-Chip enhance neural development. 9.63
Transcriptomic analysis of human tonsillar TFH subsets 9.62
RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons 9.62
A critical but divergent role of PRDM14 in human primordial germ cell fate revealed by inducible degrons 9.57
A critical but divergent role of PRDM14 in human primordial germ cell fate revealed by inducible degrons [RNA-seq] 9.57
Ascorbate Suppresses VEGF Expression in Retinal Pigment Epithelial Cells 9.53
Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed 9.52
Transcriptomic characterization of a human in vitro model of arrhythmogenic cardiomyopathy under topological and mechanical stimuli 9.46
Knockout human reveal an essential role for Paternally Expressed 10 (PEG10) in JEG3 cell line development 9.44
Exploring the RNA landscape of endothelial exosomes 9.41
TGF-β regulation of miRNA expression in pancreatic cancer 9.36
Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle 9.33
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer 9.21
Modeling Familial Cancer with iPSC Approaches 9.1
Comparing oestrogen-responsive genes in endometrial and breast cancer cell lines 9.08
Systematic analysis of gene expression profiles controlled by hnRNP Q and hnRNP R, two closely related human heterogeneous nuclear ribonucleoproteins. 9.05
In vitro differentiation of human embryonic stem cells into ovarian follicle-like cells 9.05
Ribosomal footprinting of CN34-Parental and CN34-LM1a 9.02
Global transcriptome analysis of HAP1 cells 9.0
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution 8.99
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] 8.99
Transcriptome wide analysis of classically and alternatively activated macrophages 8.95
RIG-I and MDA5 fRIP during KSHV lytic reactivation 8.91
Ribosomal footprinting of MDA-Parental and MDA-LM2 8.89
Expansion of adult human pancreatic tissue yields organoids harbouring progenitor cells with endocrine differentiation potential 8.86
Analyses of a panel of transcripts and construction of RNA networks in hepatocellular carcinoma 8.83
Transcriptional profiling of MDA-MB-231 and its ρ0 cells (lacking mtDNA) after 48h arginine depletion by arginine deiminase (ADI). 8.77
A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [SHSY5Y cells] 8.71
MOV10 Is a 5' to 3' RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3'UTRs (expression) 8.69
MOV10 Is a 5' to 3' RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3'UTRs 8.69
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma 8.61
RNA-Seq of over-expression and knockdown of the lncRNA SLNCR1 in melanoma cells 8.59
Differential Gene Expression between MCF10A and MCF7 cells 8.58
Reassessment of Exosome Composition 8.55
UBL5 is essential for pre-mRNA splicing and sister chromatid cohesion in human cells 8.54
PNET animal model: new insights (II) 8.51
Unraveling cis-regulatory elements by mapping structural changes in mRNAs 8.51
Epigenetic siRNA and chemical screens identify SETD8 inhibition as a new therapeutic strategy of p53 reactivation in high-risk Neuroblastoma. 8.46
Transcriptome profiling of microRNA-mediated neuronal reprogramming with REST repression at day 7 8.45
U1 snRNP telescripting regulates size-function stratified human genome 8.44
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 8.39
Identification of an NKX3.1-G9a-UTY regulatory network that controls prostate differentiation (Human_RWPE1_RNA-Seq) 8.37
Identification of an NKX3.1-G9a-UTY regulatory network that controls prostate differentiation 8.37
DGCR8 acts as a novel adaptor for the exosome complex to degrade double-stranded structured RNAs 8.35
Poly(A)-ClickSeq resolves CF25-mediated alternative poly-adenylation, HeLa 8.33
BCL11B 8.3
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 8.26
Long non-coding RNA profiling of human lymphoid progenitors reveals transcriptional divergence of B cell and T cell lineages 8.26
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] 8.25
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation 8.25
Accurate annotation of human protein-coding small open reading frames 8.22
Changes in chromatin accessibility and gene expression induced by overexpression of ONECUT transcription factors 8.21
Profiling of gene expression using RNA-Seq in fibroblasts, iPSCs, iPSC-derived neurons and cells overexpressing Onecut transcription factors 8.21
Profiling of circular RNAs in gastric cancer tissues and adjacent normal tissues 8.2
Interactions of aCPs with Cytosine-rich Polypyrimidine Tracts Enhance Splicing of Cassette Exons 8.19
NHLRC1 re-expression in cancer cells 8.18
A compendium of promoter-centered long-range chromatin interactions in diverse human tissues and cell types 8.15
Genetic Tagging During Human Mesoderm Differentiation Reveals Tripotent Lateral Plate Mesodermal Progenitors 8.13
The age and genomic integrity of neurons after cortical stroke in humans 8.09
The Jumonji-domain histone demethylase inhibitor JIB-04 deregulates oncogenic programs and increases DNA damage in Ewing Sarcoma, resulting in impaired cell proliferation and survival, and reduced tumor growth 8.06
Cooperation of GRSF1 and the mitochondrial degradosome (hSuv3-PNPase complex) in degradation of mitochondrial RNA 8.05
RNA-seq in acute myeloid leukemia (AML) cells with and without knockdown of METTL14 7.99
Mechanistic Model-Guided Study of Embryonic Morphogenesis 7.98
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (human 3' mRNA-seq) 7.96
DJ-1 is dispensable for human stem cell homeostasis 7.94
GRHL2 is a key lineage determining factor which collaborates with FOXA1 to establish a targetable collateral pathway in the setting of endocrine therapy-resistant breast cancer (RNA-Seq data set 2) 7.94
Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer 7.9
Gene expression and 4sUDRB-seq for NF90/NF110 of human scramble and KD HeLa cells. 7.9
Induction of human SST and PV neurons by expressing a single transcription factor LHX6 7.9
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer 7.88
miR-93 Targets in Human Endothelial Cells 7.87
MicroRNA targetome analysis during HCMV infection 7.86
RNA-sequencing with micro-dissected boundary organoid into anterior, posterior, and boundary regions 7.8
Enriched EWSR1 and EWS-FLI1 RNA-seq of HNRNPH1-silenced TC32 Ewing sarcoma and 293T human embryonic kidney cells. 7.73
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 7.73
Transcriptome wide analysis of translation efficiency in MCF7 cells using polysome profiling with and without eIF4A inhibition by hippuristanol treatment 7.73
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 7.73
RNA-seq in transgenic cells 7.71
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells 7.69
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells (longRNA-seq) 7.69
Identification of PAX7-induced transcriptional changes and PAX7 genomic binding during skeletal myogenic differentiation of H9 embryonic stem cells 7.66
Response of triple negative breast cancer to BAZ2A/B inhibition and BET bromodomain inhibition alone and in combination 7.63
Response of triple negative breast cancer to BAZ2A/B inhibition and BET bromodomain inhibition alone and in combination (RNAseq) 7.63
CHCHD2 gene KO effect in iPSC drived motor neurons 7.63
Transcriptome profiling of hnRNP A2/B1 and A1 depleted cells 7.62
Next Generation Sequencing Facilitates Quantitative Analysis of ALDH+ E-BCSC, CD24-CD44+ M-BCSC and Bulk tumor cell Transcriptomes from MC1 and Vari068 PDX models of TNBC 7.61
Self-organization of polarized cerebellar plate neuroepithelium in three-dimensional culture of human pluripotent stem cells 7.59
Identification of monocyte-like precursors of granulocytes as a mechanism for accumulation of PMN-MDSC in cancer 7.58
RNA-sequencing (RNA-seq) in BxPC-3 and S2-007 cell lines 7.57
Subcellular RNA fractions of HSV-1 infected primary human fibroblasts 7.57
CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles (RNA-seq) 7.55
CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles 7.55
Diverse AR-V7 cistromes in castration-resistant prostate cancer are governed by HoxB13 7.48
Tyrosine-1 of RNAPII CTD controls global termination of gene transcription in mammals 7.46
The comparison of high-throughput single-cell RNA-seq methods 7.46
Intrahepatic MAIT cell gene expression revealed by RNA-seq 7.44
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [RNA-Seq2] 7.4
The Genetic Landscape of Diamond-Blackfan Anemia 7.35
Determining mRNA half-lives on a transcriptome-wide scale 7.33
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation 7.32
Lipid degradation promotes prostate cancer cell survival 7.28
Transcriptomic Analysis of Endothelial Cells from Fibrovascular Membranes in Proliferative Diabetic Retinopathy 7.24
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 7.22
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 7.21
Human Adult Sorted Live Cell Erythroblasts RNA-Seq. 7.2
Cellular gene expression during Hepatitis C Virus replication revealed by Ribosome profiling 7.2
Hepatocyte maturation 7.19
Intron retention induced by microsatellite expansions as a disease biomarker. 7.13
Inhibition of TAZ contributes radiation-induced senescence and growth arrest in glioma cells 7.07
Transcriptomic analysis of primary human T cells and murine RAW 264.7 macrophages 3D cultured in different collagen densities 7.03
Identification of metabolically distinct adipocyte progenitor cells in human adipose tissues 6.95
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells 6.92
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [RNA-seq] 6.92
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes 6.92
Microprocessor mediates transcription termination in long noncoding microRNA genes 6.92
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers (RNA-Seq) 6.91
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers 6.91
Poly(A)-specific ribonuclease (PARN) mediates 3' end maturation of the telomerase RNA component 6.88
Mapping interactions for the TNIP2 hub protein 6.85
Next Generation Sequencing upon siRNA-mediated knockdown of DRAIC in MCF-7 cells. 6.83
Toxicogenomics of the flame retardant tris (2-butoxyethyl) phosphate in HepG2 cells using RNA-seq. 6.81
Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid  during virologically suppressed HIV 6.76
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA 6.67
CircRNAome diversity in human mature B-cells, T-cells and monocytes 6.67
Gene expression in skeletal muscle in older individuals subject to ten days of complete bed rest. 6.64
Global expression profiles in cardiac progenitor cells generated by ISX-9 6.63
Global mRNA expression profile in cardiac progenitor cells generated by ISX-9 6.63
Activity-dependent transcriptional changes in human neurons 6.6
CD161+ Tconv and Treg share transcriptome and display a migratory phenotype which is modified at the inflamed site 6.58
Translocation of dense granule effectors across the parasitophorous vacuole membrane in Toxoplasma-infected cells requires the activity of ROP17, a rhoptry protein kinase 6.58
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling (mRNA) 6.57
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling 6.57
A transcriptional regulatory network connects mitochondrial biogenesis and metabolic shift with stem cell commitment to hepatic differentiation 6.55
The pause-initiation limit restricts transcription activation in human cells 6.54
METTL3 and WTAP 6.51
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 6.5
Enhancement of Arterial Specification in Human Pluripotent Stem Cell Cultures Promotes Definitive Hematoendothelial Program with Broad Myelolymphoid Potential 6.46
Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells 6.43
EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq] 6.43
The interplay between SOX4 and SMAD3 in the context of breast cancer 6.42
Dissecting the dynamics of signaling events in the BMP,WNT and NODAL cascade during self-organized fate patterning in human gastruloids 6.34
Identifying the molecular mode of action of itraconazole in colorectal cancer 6.32
Global hypomethylation mediated changes regulate constitutive PD-L1 expression in melanoma 6.29
Global hypomethylation mediated changes regulate constitutive PD-L1 expression in melanoma [RNA-Seq] 6.29
The transcriptomic differences between Th1, Tr1, and Tneg cells in controlled human malaria infection 6.1
Genome-wide DNA accessibility maps and differential gene expression using ChIP-seq, ATAC-seq and RNA-seq for the human secondary fibroblast cell line hiF-T and whole worms with and without knockdown of FACT complex 6.04
The transcriptome and chromatin accessbility landscape of mammalian germline 6.03
Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-thioguanisine 6.02
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 5.99
Zoledronic acid inhibits NFAT and IL-2 signaling pathways in regulatory T cells and diminishes their suppressive function in patients with metastatic cancer 5.94
Viral determinants in H5N1 influenza A virus enable productive infection of HeLa cells 5.91
Genome-wide view of the impact of Spt5-Pol II inhibitors (SPIs) on mRNA levels [RNA-Seq 24h] 5.87
Expansion, in vivo-ex vivo cycling and genetic manipulation of primary human hepatocytes 5.79
PGE2 mediated gene expression changes in human cervical stromal cells 5.78
ChIPseq and RNAseq analysis of T47D cells with/without silencing TRPS1/CHD4 5.71
Transcription elongation regulates genome 3D structure 5.68
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma 5.66
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (RNA-Seq) 5.66
Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes—GMUCT 2.0 5.66
Nuclear Actin Regulates Inducible Transcription by Enhancing RNA Polymerase II Clustering 5.64
Early transcriptome profiling of microRNA-mediated neuronal reprogramming [RNA-seq timecourse] 5.64
Global unleashing of transcription elongation waves in response to genotoxic stress restricts somatic mutation rate 5.58
LncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression 5.5
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues (sequencing) 5.49
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues 5.49
ILF2 Regulates RNA Splicing of DNA Damage Response Genes to Confer Poor Prognosis in 1q21-Amplified Multiple Myeloma 5.46
CD13 and ROR2 permit isolation of highly enriched cardiac mesoderm from differentiating human embryonic stem cells 5.46
Isolation of highly enriched cardiac mesoderm from differentiating human embryonic stem cells 5.46
RNA sequencing of lesional and nonlesional skin from patients with atopic dermatitis 5.46
Generation and persistence of human tissue-resident memory T cells in lung transplantation 5.42
Next generation sequencing of small RNAs isolated from exosomes in human semen 5.38
Biosynthesis of histone messenger RNA employs a specific 3' end endonuclease 5.36
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons 5.31
Hyper-excitability of Neurons generated from Patients with Bipolar Disorder 5.3
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 5.3
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 5.3
Rate of elongation by RNA polymerase II is influenced by specific gene features and histone modifications 5.28
RNA editing in nascent RNA affects pre-mRNA splicing 5.27
CHD7 is Suppressed in the Perinecrotic/Ischemic Microenvironment and is a Novel Regulator of Angiogenesis 5.18
Arrayed molecular barcoding identifies TNFSF13 as a positive regulator of acute myeloid leukemia-initiating cells 5.18
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq] 5.13
RNA deep sequencing to compare genome-wide differences between PRMT5/knockdown and control AML cells 5.09
Next Generation Sequencing Facilitates Quantitative Analysis of UVB(20mJ/cm2 and 40mJ/cm2) exposed and untreated HaCaT keratinocytes Transcriptomes 5.06
Landscape and variation of RNA secondary structure across the human transcriptome 5.01
Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis 4.98
Regulation of cellular heterogeneity and rates of symmetric and asymmetric divisions in triple-negative breast cancer 4.94
Next Generation Sequencing for Quantitative Analysis of transcriptome of follicular compared to non-follicular CD8 T cells from HIV+ Lymph nodes 4.92
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines 4.92
Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production 4.9
Nm-seq finds thousands of modified 2’-O-methylation sites in mRNA with base precision 4.85
RNA sequencing of CACO-2 cells incubated with bifidobacteria grown on human milk oligosaccharides. 4.78
SRSF1 role in cellular gene expression and splicing 4.75
Stage-specific regulation of the WNT/β-catenin pathway enhances differentiation of hESCs into hepatocytes 4.73
LIN28A Over-expression RNAseq 4.66
Determining effects of microbial metabolite, Urolithin A on colon epithelial cells 4.63
Comparison of small cell lung cancer PDX model FHSC04 for response to LSD1 inhibitor RG6016/ORY1001 4.61
TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding 4.59
RNA-seq analysis of umbilical cord blood cells upon knockdown of NAP1L3 4.58
Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient 4.46
The bromodomain protein BRD4 regulates splicing during heat shock 4.44
CNOT1 and Transcriptomic Landscape of a HeLa Cell Line 4.41
Regulatory network controlling tumor-promoting inflammation in human cancers [RNA-seq] 4.37
Regulatory network controlling tumor-promoting inflammation in human cancers 4.37
naive T cell heterogeneity after neonatal thymectomy 4.32
Gene expression profiling of human MSC-educated macrophages vs. classical macrophages from bone marrow and blood 4.31
A single-cell transcriptome atlas of the human pancreas 4.29
Potent antitumor activity of Cabozantinib, a c-MET and VEGFR2 Inhibitor, in a Colorectal Cancer Patient-derived Tumor Explant Model 4.28
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 4.28
Chemical Modulation of Glycolysis Regulates the KEAP1-NRF2 Pathway Through a Metabolite-Induced Posttranslational Modification 4.2
mRNA-sequencing of U87 glioblastoma and DAOY medulloblastoma spheroidal aggregates undergoing electrotaxis 4.16
Transcriptome analysis of peripheral blood monocytes 4.14
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 4.11
Non-inflammatory tumor microenvironment of Diffuse Intrinsic Pontine Glioma (DIPG) 4.1
Probing the Global Cellular Responses to Lipotoxicity Caused by Saturated Fatty Acids 4.06
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 4.02
Regulation of the glucocorticoid receptor via a BET-dependent enhancer drives antiandrogen resistance in prostate cancer 3.94
Transcriptome analysis of CNS leukemia 3.94
RNA-seq analysis of primary patient samples to characterize the CNS leukemia 3.94
Transcriptome analysis revealed impaired cAMP responsiveness in PHF21A-deficient human cells 3.85
Aging-associated patterns in the expression of human endogenous retroviruses 3.83
RNA-seq analysis of SLIRP knockdown with 1nM DHT in LNCaP cells 3.79
Platelet Transcriptome Profiling in HIV and ABCC4 as a Biomarker of Platelet Activity 3.74
DDX54 regulates transcriptome dynamics during DNA damage response [4SU-seq] 3.73
Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma 3.69
RNA-seq analysis in Cornea epithelial cells (CECs), skin epithelial cells (SECs), LSCs after knocking down PAX6 (3-D shPAX6 LSCs) and SESCs transduced with PAX6(3-D PAX6+ SESCs) upon 3-D differentiation 3.68
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] 3.67
Subclonal cooperation drives metastasis through modulating local and systemic immune microenvironments 3.67
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP 3.67
FMR1 reactivating treatments in Fragile X iPSC-derived neural progenitors in-vitro and in-vivo 3.63
The mRNA expression analysis of psoriasis skin lesion mesenchymal stem cell 3.59
siRNA-mediated knockdown 3.59
RING-finger protein 6 amplification activates JAK/STAT3 pathway by modifying SHP-1 ubiquitylation and associates with poor outcome in colorectal cancer 3.58
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 3.53
ADAR1-editing in HeLa, p150-KO and ADAR1-KO transcriptomes 3.51
ADAR1-editing of cellular and measles virus-derived duplex RNA 3.51
Proximity-CLIP provides a snapshot of occupied cis-acting elements on RNA in different subcellular compartments on a transcriptome-wide scale 3.51
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer 3.48
Loss of Function Mutations in ETS2 Repressor Factor (ERF) Reveal a Balance Between Positive and Negative ETS Factors Controlling Prostate Oncogenesis [22PC RNA-seq] 3.43
Antiviral and anti-inflammatory properties of novel anti-HIV candidate ABX464 promotes specifics RNA splicing while preserving cellular RNA integrity. 3.41
TLR2 dimerization blockade allows generation of homeostatic intestinal macrophages under acute colitis challenge 3.39
Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants 3.38
APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa 3.36
Ribo_seq (aka ribosome profiling) analysis of control and Myc-induced U2OS cells 3.36
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 is essential for p53-null cancer cells 3.35
Functional characterization of human T cell hyporesponsiveness induced by CTLA4-Ig 3.34
Differential gene expression by suppression of either SOX2 or TP63 in KYSE70 human esophageal squamous carcinoma cell line. 3.28
Impact of Escherichia coli K12 and O18 on human platelets: effects on platelet activation, spliced platelet RNAs and proteins 3.23
A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism. 3.22
A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism: Liver RNA profiles of lean non-diabetic, obese non-diabetic as well as obese diabetic humans. 3.22
Wide-spread disruption of transcription termination in HSV-1 infection: Next-generation sequencing of translational activityd by ribosome profiling 3.22
The metabolome regulates the epigenetic landscape during naïve to primed human embryonic stem cell transition 3.21
The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set) 3.16
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 3.15
Modeling Human Cancer-induced Cachexia (Human) 3.13
CDK4/6 inhibitors target SMARCA4-determined cyclin D1 deficiency in hypercalcemic small cell carcinoma of the ovary (I) 3.07
RNA-seq of RKO cells with cTAZ KO or putback 3.06
Quantitative Proteomics Reveals a Unique Wiring of Signaling Pathways that Protects Human Regulatory T Cell Identity 2.98
Gene expression analysis upon mtDNA depletion 2.95
Gene expression analysis upon mtDNA depletion [RNA-seq] 2.95
Effects of plasticizers (bisphenol A, bisphenol AF) and an herbicide in MCF7 human breast cancer cells 2.89
The p30 isoform of CEBPA uncovers a silent enhancer to drive the expression of the tumor promotive factor CD73 in CEBPA mutant AML 2.89
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes 2.83
Human Treg IL-12 stimulation 2.82
Transcriptome response to 4h IL-1b stimulation of primary chondrocytes 2.8
Dilated cardiomyopathy vs Myocarditis 2.8
Human ovarian granulosa cell transcriptome 2.74
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 2.72
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm 2.71
Transcriptomic analysis of inter- and intra-patient variation in human iPSC cardiomyocytes: Platform for precision medicine to predict drug toxicity 2.65
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 2.63
Transcriptome-wide response to synthetic chromatin protein PcTF 2.63
An siRNA screen identifies CHD4 as a target for epigenetic therapy 2.63
Toxoplasma gondii infection of human retinal pigment epithelial cells 2.62
Epigenetic reprogramming of melanoma cells by vitamin C treatment 2.57
Differential Protein Occupancy Profiling of the mRNA Transcriptome 2.54
Expression of the mannose receptor (CD206) defines distinct populations of human colonic macrophages in health and inflammatory bowel disease 2.54
mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs 2.46
Positively selected enhancer elements endow tumor cells with metastatic competence 2.44
Recapitulating and Deciphering Tumor-stroma Microenvironment by Using a “LEGO” like 3D printed microfluidic device 2.38
Effects of transcription factor CEBPA knockdown on vitamin D target gene regulation in THP-1 cells 2.36
The pioneer factor CEBPA modulates vitamin D signaling 2.36
Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [TMCC2] 2.36
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction [III] 2.36
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet 2.34
PT2385 HIF2A inhibitor treatment of patient derived orthotopic xenograft neuroblastoma cells in the presence or absence of hypoxia 2.31
Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells 2.28
Cooperation of dominant oncogenes with regulatory variants shapes clinical outcomes in pediatric cancer 2.26
RNA-seq of three Ewing sarcoma cell lines (A673, SK-N-MC, RDES), transfected with either siControl or siMYBL2. 2.26
Pain-driven transcriptome changes in synovium of knee osteoarthritis patients 2.25
RNA-sequencing of Wnt-dependent and Wnt-independent of Glioblastoma stem cell cultures 2.25
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells 2.21
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells [RNA-seq] 2.21
Transcriptomic profiling of cleavage-resistant RIPK1 induced autoinflammation syndrome patients 2.16
RNA Seq of Alagille liver biopsies 2.15
Alagille_Nodder 2.15
The transcriptomic landscape of MAIT cell development in the thymus (C006 RNAseq data set) 2.14
Exogenous rescue of KLHL9 in SF210 cell line 2.13
Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses 2.11
Transcriptomes of human monocytes and monocyte-derived macrophages with or without glucocorticoid treatment 2.07
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 1.99
Single-cell analysis of human kidney organoids 1.88
Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis 1.86
Transcriptome profiling of self-renewing hESCs and multipotent mesoderm progenitor cells as a function of substrate stiffness 1.83
Structure and degradation of circular RNAs regulate PKR activation in innate immunity 1.81
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG 1.78
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG functional reactivation [human cells RNA-seq] 1.78
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 1.7
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 1.62
Solid phase chemistry to covalently and reversibly capture thiolated RNA 1.58
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 1.55
Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma 1.51
Tri-mannose grafting of chitosan nanocarriers remodels the macrophage response to bacterial infection 1.44
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 1.38
Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity 1.37
Gene expression profiling in metabolically heterogeneous human lung tumors 1.35
T-bet recruits P-TEFb to super-enhancers to regulate T helper cell differentiation (RNA-Seq) 1.35
T-bet recruits P-TEFb to super-enhancers to regulate T helper cell differentiation 1.35
Transcriptome sequencing identify a recurrent CRYL1-IFT88 chimeric transcript in hepatocellular carcinoma 1.34
Analysis of active enhancers and direct androgen receptor target genes in VCaP prostate cancer cells 1.34
Perlman syndrome nuclease DIS3L2 controls cytoplasmic non-coding RNAs and provides surveillance pathway for maturing snRNAs 1.34
Gene expression analysis of human adenomas. 1.32
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 1.32
Induced DNA demethylation, genome instability and transcription 1.26
Impact of DNA demethylation agents (5-azacytidine or vitamin C) on gene expression in glioblastoma HSR-GBM1 cells 1.26
Genetic and Epigenetic Landscapes of Laterally Spreading Tumors of the Colorectum 1.24
Molecular characterization of gene regulatory networks in primary human tracheal and bronchial epithelial cells. 1.21
Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq 1.2
RNA-sequencing analysis of 5' capped RNAs identifies novel differentially expressed genes in sessile serrated colon polyps (SSPs) 1.15
Next Generation Sequencing Facilitates Comparisons of Control and Schizophrenia-Patient derived hiPSC-derived neurons 1.06
Highly-motile versus unsorted MDA-MB-231 breast cancer cells 1.02
Integrated high-throughput screen to identify novel treatment leads for pediatric acute myeloid leukemia (AML) 1.0
System-wide profiling of RNA-binding proteins uncovers key regulators of virus infection 1.0
Pro-angiogenic Ginsenoside F1 and Rh1 Inhibit Vascular Leakage by Modulating NR4A1 1.0
Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors [Modifications - screen] 0.99
Estrogen Receptor Beta Impacts Hormone-Induced Alternative mRNA Splicing in Breast Cancer Cells 0.99
Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia 0.97
Gene expression changes due to PARP knockdown in human cells 0.92
The lung-enriched p53 mutants V157F and R158L/P regulate a novel transcriptome in lung cancer 0.91
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas 0.9
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq] 0.9
Enhancer activation during EGF response 0.9
An evolutionary recent IFN-IL-6-CEBP axis is linked to monocyte expansion and tuberculosis severity in humans. 0.89
Programmable RNA N6-methyladenosine editing by CRISPR-Cas9 conjugates 0.81
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 0.81
The DPYSL2 gene connects mTOR and schizophrenia 0.79
Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients 0.74
RNA sequencing of isogenic BRCA2 haploinsufficient vs. wild-type T-ALL cells 0.7
Total RNA-Seq data from leukemic patients with complex structural variants 0.7
Transcriptomic profile of intestinal epithelial cells obtained from ileal endoscopic biopsies from newly-diagnosed, pediatric Crohn's disease patients and healthy controls. 0.65
ELAVL2-regulated transcriptional networks in human neurons link atlernative splicing, autism and human neocortical evolution 0.63
Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell RNA-seq 0.63
Transcriptomic Analysis Of circRNAs/miRNAs/mRNAs upon Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection 0.6
Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains 0.57
Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course 0.57
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 0.57
Unbiased identification of trans regulators of ADAR and A-to-I RNA editing 0.5
Aortic Valve Tissue: Stenosis vs. Sclerosis 0.48
Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes 0.42
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 0.38
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 0.38
Frailty in middle age is associated with race-specific changes to the transcriptome. 0.36
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 0.33
Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer 0.3
Human pulmonary artery endothelial cells (hPAECs) with downregulated BMPR2 signaling demonstrate a unique gene expression signature after exposure to overexpression of AdAlox5 0.28
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.21
Tracking distinct RNA populations using efficient and reversible covalent chemistry 0.21
Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes 0.2
Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors 0.19
RelA mutants 'reconstituted' and cell cycle synchronized HCT116 Colorectal Cancer Cells 0.17
RNA sequencing from FOXM1 knockout HEK293T cells reconstituted with FOXM1 isoforms a, b and c. 0.17
RNA sequencing, chromatin accesibility and ChIP seq analysis of BAP1 -/- human liver organoids 0.13
In search for materials able to be colonized by a normal endothelium: сharacterization and NGS gene expression profiling of human primary endotheliocytes cultivated on electrospun 3D matrices 0.12
The Small Molecule ISRIB Reverses the Effects of eIF2α Phosphorylation on Translation and Stress Granule Assembly 0.11
A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module 0.08
Targeting Spt5-Pol II small-molecule inhibitors uncouple distinct activities and reveal additional regulatory roles 0.08
The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. [RNA-Seq] 0.07
The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. 0.07
6mer seed toxicity in viral microRNAs 0.07
Global transcriptome analysis of WT versus HEB-/- hESCs 0.06
Longitudinal transcriptome profiling of post-treatment Lyme disease syndrome 0.04
MHC Transcriptomic landscape at haplotype-specific resolution 0.02
Expression profile of MM.1S tumors folloiwing treatment with bortezomib 0.01
Transcriptomic analysis of healthy donor and Sickle Cell Disease (SCD) hematopoietic stem/progenitor cells 0.01


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