Gene Query: CCDC110

Dataset Description Geneva Score
The Human Testis Cell Atlas via Single-cell RNA-seq 22.98
The conserved transcriptional landscapes in human spermatogenesis 13.44
In vitro modeling of human germ cell development using pluripotent stem cells 6.93
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq) 4.73
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients 4.25
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples 4.0
Transcription differences in DLBCL cell lines U2932, DOHH2 on treatment with TK compound compared to DMSO 3.98
Transient stabilization, rather than inhibition of MYC amplifies extrinsic apoptosis and therapeutic responses in refractory B-cell lymphoma 3.29
CD86 regulates a pro-survival signal in myeloma cells 3.29
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium 2.88
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium [RNA-Seq] 2.88
Genomic profiling of human spermatogonial stem cells [BulkRNA-Seq] 2.75
NSD2 overexpression links drives clustered chromatin and transcriptional changes in a subset of insulated domains of insulated domains 2.74
Transcriptional Modulation of Human Endogenous Retroviruses in Primary CD4+ T Cells Following Vorinostat Treatment 2.49
Effect of PRDM11 depletion in U2932 cells 2.16
Targets of CDK12 on ZR-75-30 breast cancer cells (RNA-seq) 1.86
Characterizing smoking-induced transcriptional heterogeneity in the human bronchial epithelium at single-cell resolution 1.74
Genome-wide maps of H3K36me3 in ccRCC and RNA-seq of matched nephrectomy samples 1.69
RNA sequencing of matched nephrectomy samples [RNA-seq] 1.69
Novel mutations segregating with Complete Androgen Insensitivity Syndrome and their molecular characteristics. 1.3
Identifying ASCL1 target genes in primary GBM stem cell cultures [RNA-seq] 0.94
Plasma cell mitochondrial pyruvate import controls the duration of humoral immunity. 0.91
Gene expression profile of multiple myeloma cell lines treated with CB-5083 0.9
MicroRNA-28 replacement for non-Hodgkin lymphoma therapy 0.88
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer 0.81
A non-canonical role of YAP/TEAD is required for activation of estrogen-regulated enhancers in breast cancer [RNA-seq] 0.8
A non-canonical role of YAP/TEAD is required for activation of estrogen-regulated enhancers in breast cancer 0.8
CXCR4 regulates extra-medullary myeloma through epithelial-mesenchymal transition-like transcriptional activation 0.78
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [HCC1599_RNA-seq] 0.78
Multiple waves of transcriptome changes during extended hypoxic induction in human pulmonary microvascular endothelial cells 0.77
Discovery of naturally occurring ESR1 mutations during acquisition of resistance to endocrine therapy in widely used estrogen receptor positive breast cancer cell lines [RNA-Seq] 0.77
Discovery of naturally occurring ESR1 mutations during acquisition of resistance to endocrine therapy in widely used estrogen receptor positive breast cancer cell lines 0.77
Neonatal and adult human testis defined at the single-cell level 0.75
The multiple myeloma risk allele at 5q15 lowers ELL2 expression and increases ribosomal gene expression [ELL2 KO] 0.73
Appropriately Differentiated ARPE-19 Cells Regain a Native Phenotype and Similar Gene Expression Profile 0.71
Genome-wide analysis of STAT3 in diffuse large B-cell lymphoma 0.68
An optimization system for isolating and sequencing of single human colon cancer cells 0.65
The role of FAM46C in myeloma cells 0.64
The role of FAM46C in myeloma cells [sequencing] 0.64
Global transcript structure resolution of high gene density genomes through multi-platform data integration: Illumina RNA-Seq 0.63
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 0.61
Temporal activation of NR5A2 and RARγ induce functional human naïve pluripotent state via modulating TGFβ pathway 0.55
EZH2 and BCL6 cooperate to assemble CBX8-BCOR Polycomb complex to repress bivalent promoters, mediate germinal center formation and promote lymphomagenesis 0.55
EZH2 and BCL6 cooperate to assemble CBX8-BCOR Polycomb complex to repress bivalent promoters, mediate germinal center formation and promote lymphomagenesis [RNA-seq] 0.55
Transcriptome profiling (RNA-seq) of CREBBP+/+ and CREBBP+/- clones of U2932 DLBCL cell line 0.53
Therapeutic targeting of GCB- and ABC-DLBCLs by rationally designed BCL6 inhibitors 0.51
Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors 0.46
Global Regulation of Alternative Internal Exon Usage by mRNA 3' End Formation Factors [RNA-Seq] 0.46
Expression by CD133+ cells isolated from the adult human exocrine pancreas 0.46
RNA-Seq study of Cell lines rendered resistant to idelalisib and ibrutinib 0.45
Non-IG Aberrations of FOXP1 in B-Cell Malignancies Lead to an Aberrant Expression of N-Truncated Isoforms of FOXP1 0.45
STX4 Over-Expression in Human islets 0.45
Effect of ROQUIN2(Y691F) expression on mRNA levels upon BCR stimulation 0.44
Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples 0.44
Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells 0.44
EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq] 0.44
PRMT5 Interacts with the BCL6 Oncoprotein and is Required for Germinal Center Formation and Lymphoma Cell Survival 0.43
Overexpression of UGT2B17 in MEC1 and JVM2 leukemia cell lines 0.42
The Human Testis Cell Atlas via Single-cell RNA-seq (Healthy men scRNA-seq data set) 0.42
Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing 0.38
Human islets of varying quality: the good, the (not so) bad and the ugly 0.38
Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways 0.38
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [RNA-seq] 0.36
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours 0.36
ARID1A regulates condensin II distribution and chromosomal partition 0.34
ARID1A regulates condensin II distribution and chromosomal partition [RNA-seq] 0.34
m6A-seq data analysis of control and PCIF1 knockdown transcriptome 0.34
BRG1 governs Glucocorticoid Receptor interactions with chromatin and pioneer factors across the genome 0.34
The multiple myeloma risk allele at 5q15 lowers ELL2 expression and increases ribosomal gene expression [ELL2 rescue] 0.34
EP400 is required for Max and MCPyV mediated gene activation 0.33
Universal alternative splicing of noncoding exons 0.33
Expression profile of HNF1A knockdown and overexpression in 22RV1 and LNCaP cells respectively 0.32
POLR3G Dependent PolyA+ and smallRNA Transcriptomes in Human Pluripotent Stem Cells 0.32
24hr CA treatment vs. DMSO in HCT116 cells (from 'Identification of CDK8 and CDK19 substrates in human cells using cortistatin A and quantitative phosphoproteomics') 0.3
Genomic basis for clinical response to histone deacetylase inhibition in advanced urothelial carcinoma 0.3
Single cell transcriptome of peritoneal cells 0.29
Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing 0.28
Transcriptomes change differerntly in differernt cancer cells upon EPZ-6438 treatment 0.28
Analysis of active enhancers and direct androgen receptor target genes in VCaP prostate cancer cells 0.28
Identification of Differentially Expressed Splice Variants by the Proteogenomic Pipeline Splicify 0.28
Genome-wide Gene Expression Profiling in DLBCL Cell Lines Treated with CUDC-907 0.27
Evaluation of RNA amplification and RNA-Seq library preparation protocols for spermatozoa RNA profiling 0.27
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures [RNA-Seq] 0.27
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures 0.27
Global Bidirectional Transcription of the Epstein-Barr Virus Genome During Reactivation 0.27
MYCL and EP400 are required for Max and MCPyV mediated gene activation 0.27
Discovering human diabetes-risk gene function with genetics and physiological assays 0.26
Differential expression in LNCaP cells expressing the wild-type androgen receptor (AR-WT) or the ligand-independent AR-V7 splice variant 0.25
mRNA differential expression in LNCaP cells expressing the wild-type androgen receptor (AR-WT) or the ligand-independent AR-V7 splice variant 0.25
Inhibiting the oncogenic translation program is an effective therapeutic strategy in multiple myeloma 0.25
Effects of Polybrominated Diphenyl Ether (PBDE) Mixture on estrogen receptor positive (ER+) patient-derived tumor xenograft (PDX) model 0.24
Cystathionine-β-Synthase Promotes Colon Carcinogenesis 0.24
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 0.24
Molecular analysis of renal cell carcinoma with unclassfied histology 0.24
Molecular analysis of renal cell carcinoma with unclassfied histology [gene expression] 0.24
The comparison of high-throughput single-cell RNA-seq methods 0.23
LIN28A modulates splicing and gene expression programs in breast cancer cells [RNA-Seq] 0.23
LIN28A modulates splicing and gene expression programs in breast cancer cells 0.23
Transcriptomic responses to Ivacaftor and prediction of Ivacaftor clinical responsiveness 0.23
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes 0.22
The effects of U1 snRNA mutation in chronic lymphocytic leukemia cell lines 0.22
In vivo generation of post-infarct human cardiac muscle by laminin-promoted cardiovascular progenitors [LN-521 or LN-521+LN-221] 0.22
S-adenosyl-methionine treatment selectively block liver cancer cell lines transformation and invasiveness by alterations of cancer- and invasion specific transcriptome and methylome 0.22
S-adenosyl-methionine treatment selectively block liver cancer cell lines transformation and invasiveness by alterations of cancer- and invasion specific transcriptome and methylome (RNA-Seq) 0.22
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells 0.21
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells (RNA-seq) 0.21
Suppression of NAF-1 in Breast Cancer Cells Reduces their Tumorigenicity by Interfering with Cellular Iron Distribution and Metabolism and Ensuing ROS Formation and Apoptosis 0.21
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition 0.21
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [RNA-Seq] 0.21
Identification of a LIF-responsive replication-competent human β cell 0.2
Histone deacetylase inhibition enhances antimicrobial peptide but not inflammatory cytokine expression upon bacterial challenge 0.2
Class I histone deacetylases HDAC1, 2 and 3 are histone decrotonylases 0.2
Human Pancreatic Islets Expressing HNF1A Variant Have Defective β cell Transcriptional Regulatory Networks 0.19
AR-independent prostate cancer is sustained through FGF signaling 0.19
Gene expression profile of human multiple myeloma cell line MM.1S after knockdown of KDM6B 0.19
Gene expression in mature and immature human ES-derived beta cells, and sorted beta-cells from adult islets 0.18
Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer 0.18
3D genome of multiple myeloma reveals spatial genome disorganization associated with copy number variations 0.18
WRN knockout effects upon gene expression in SW48 and OVK18 0.17
Hypoxic transcriptome of SQ20B human head and neck cancer cells 0.17
A combinatorial screen of the CLOUD uncovers a synergy targeting the androgen receptor 0.16
Self-organized amniogenesis by human pluripotent stem cells in a biomimetic implantation-like niche 0.16
Dtx3L and Androgen Signaling in Prostate Cancer 0.16
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 0.16
Transcriptome response to 4h IL-1b stimulation of primary chondrocytes 0.16
Novel kinase fusion oncogenes in post-Chernobyl radiation-induced pediatric thyroid cancers 0.16
Supraphysiological Androgens Repress Prostate Cancer Growth and Induce DNA Damage Augmented by PARP Inhibition 0.15
LNCaP treated with iBET 0.14
Interaction with WDR5 recruits MYC to a small cohort of genes required for tumor onset and maintenance 0.14
RNAseq analysis of ESRP regulated splicing events in prostate cancer 0.14
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 0.14
Resistance to BET inhibitor leads to new therapeutic vulnerabilities in castration resistant prostate cancer 0.14
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing 0.14
Epigenetic silencing of the tumor suppressor RASSF4 favors multiple myeloma progression 0.14
RNA-Seq analysis and comparison of corneal epithelium in keratoconus and myopia patients 0.14
Integrative analysis of RNA, translation and protein levels reveals distinct regulatory variation across humans 0.13
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability 0.13
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq] 0.13
Next Generation Sequencing of human SMA and healthy control Motor Neurons 0.13
Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq 0.13
HDAC inhibition enhances the in vivo efficacy of MEK inhibitor therapy in uveal melanoma 0.13
ChIPseq and RNAseq analysis of T47D cells with/without silencing TRPS1/CHD4 0.13
CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair 0.13
DHX36 resolves G-rich structures in mRNA untranslated region to allow their translation [ChrRNA-seq] 0.12
Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during Epithelial-to-Mesenchymal Transition [RBM47 KD] 0.12
RNA-seq analysis of PRMT5-regulated genes in irradiated/non-irradiated LNCaP cells 0.12
Endometrial epithelial cell transcriptome response to co-culture with adipose stromal cells 0.12
The lipodystrophic hotspot lamin A p.R482W mutation deregulates the mesodermal inducer T/Brachyury and early vascular differentiation gene networks 0.12
Genome-wide functional assessment of enhancer activities in the human genome 0.12
RNA-Seq with and without RNase treatment in PCa cell lines 0.12
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells with PolyIC treatment 0.11
AKT Inhibition Promotes Non-autonomous Cancer Cell Survival [RNA-Seq] 0.11
AKT Inhibition Promotes Non-autonomous Cancer Cell Survival 0.11
Impact of DNA MMR activity on antiviral gene expression in H441 cells infected with influenza A virus 0.11
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line [RNA-Seq] 0.11
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line 0.11
MYT1 attenuates neuroblastoma cell differentiation by inhibiting retinoic acid signaling pathway 0.11
Heterozygous and homozygous knock-in of PIK3CA-H1047R into human iPSCs 0.11
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs [GRO-seq II] 0.11
NOTCH1 activation in breast cancer confers sensitivity to inhibition of SUMOylation 0.11
Amiloride, an old diuretic drug, is a potential therapeutic agent for multiple myeloma 0.11
Divergent effects of eRF3 and Upf1 on the expression of uORF carrying mRNAs and ribosome protein genes 0.11
Human TFIIH kinase CDK7 regulates transcription-associated epigenetic modification 0.11
Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation [RNA-Seq] 0.11
Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation 0.11
Apatinib preferentially inhibits Gefitinib-resistant lung cancer cells by inducing cell cycle arrest and inhibiting VEGFR signaling pathway 0.11
Modulation of SF3B1 causes global intron retention and downregulation of the B-cell receptor pathway in chronic lymphocytic leukemia 0.11
Transcriptome data from human endocrine cells recovered from mouse grafts with pre-engraftment controls 0.1
Gene expression analysis of a panel of human fibroblasts that generate an aligned (anisotropic) vs non-aligned extracellular matrix 0.1
A rare subpopulation of melanoma cells with low expression of metastasis suppressor NME1 has a neural crest-like phenotype and is highly metastatic in vivo 0.1
RNA-seq analysis of breast cancer 0.1
RNA-seq analysis and shRNA screen of breast cancer 0.1
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 0.1
mRNA-sequencing of 293T-no dice transfected with miR-16, miR-214, or KSHV-miR-K6-5p 0.1
Splicing towards noncoding isoforms in colorectal carcinoma is associated with tumor hypoxia and the DNA damage response 0.1
Lipid degradation promotes prostate cancer cell survival 0.1
Risk SNPs mediated promoter-enhancer switching promotes prostate cancer progression through lncRNA PCAT19 (RNA-seq data sets) 0.1
Risk SNPs mediated promoter-enhancer switching promotes prostate cancer progression through lncRNA PCAT19 0.1
RNA-seq of stable and unstable section of human atherosclerotic plaques 0.1
Single-cell analysis of human kidney organoids 0.1
Quantitative Analysis of PPARD Transcriptomes in Colon Cancer Cells by Next Generation Sequencing (NGS) 0.1
The RNA-binding profile of Acinus, a peripheral component of the Exon junction complex, reveals its role in splicing regulation 0.1
Integrative analysis identifies targetable CREB1/FoxA1 transcriptional co-regulation as a predictor of prostate cancer recurrence 0.1
Acetylation of spliceosome protein PHF5A modulates stress responses and colorectal carcinogenesis through alternative splicing mediated upregulation of KDM3A 0.1
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [BAA] 0.09
SIRT7 Antagonizes TGF-β Signaling and Inhibits Breast Cancer Metastasis 0.09
HDAC and NFκB antagonists synergistically inhibit growth and metastatic dissemination of MYC-driven medulloblastoma 0.09
DNA damage signaling mediates the functional antagonism between replicative senescence and terminal muscle differentiation 0.09
Gene expression for surgically treated pancreatic cancer after one neoadjuvant vaccine dose 0.09
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells 0.09
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells [GRO-seq] 0.09
Total RNA sequencing of prospective axial stem cell cultures derived from human pluripotant stem cells 0.09
Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals 0.09
microRNA suppresses prostate cancer stem cells and metastasis by inhibiting a cohort of pro-metastasis targets including CD44, Rho GTPases and EZH2 0.09
MPTAC determines APP fragmentation via sensing sulfur amino acid catabolism 0.09
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle 0.09
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle [RNA-seq] 0.09
H3K27Ac in MCF7 Y537S ER mutant cells and RNAseq with and without treatment with THZ1 0.09
Expression profiling and occupancy after knockdown or over-expression of HFN1A or HNF4G in prostate cancer cells 0.09
mRNA profiling reveals determinants of trastuzumab efficiency in HER2-positive breast cancer 0.08
RNA-seq in untreated and flagellin-treated Human Intestinal Myofibroblast cells (HIMF) 0.08
Targeting the androgen receptor N-terminus via the cochaperone Bag-1L [RNA-seq C-terminal mutant] 0.08
ONECUT2 Drives Neuroendocrine Prostate Cancer Through Hypoxia Signaling 0.08
HITS-CLIP analysis uncovers a link between the Kaposi's sarcoma associated herpesvirus ORF57 protein and host pre-mRNA metabolism 0.08
Next Generation Sequencing Study of Circadian Changes in Transcriptome of Human Pineal Gland 0.08
Gene expression in skeletal muscle in older individuals subject to ten days of complete bed rest. 0.08
Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline 0.08
High-depth RNA sequencing of isogenic wild-type, PIK3CA-WT/H1047R and PIK3CA-H1047R/H1047R human iPSCs 0.08
Nuclear import of the DSCAM-cytoplasmic domain drives signaling capable of inhibiting synapse formation 0.08
Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma [RNA-Seq; normal samples] 0.08
A radiolabeling-free, qPCR-based method for locus-specific pseudouridine detection 0.08
Inhibition of ERG Activity in Patient Derived Prostate Cancer Xenografts using the Small Molecule Inhibitor YK-4-279 0.08
Expression profile of MM.1S tumors folloiwing treatment with bortezomib 0.08
transcriptomic profiling of HEK293 cells upon individual knockdown of the splicing factors RBM17, U2SURP or CHERP 0.08
ChIP-seq of ER and RUNX2 in MCF7 breast cancer cell lines 0.08
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 0.08
Global gene expression differences between blood- and lymphatic-specific human dermal microvascular endothelial cells 0.08
Transriptional profiling upon heat shock and recovery in cells deficient for FBXW7 and their wild type counterpart. 0.08
FBXW7 modulates stress response by post-translational modification of HSF1 0.08
Long non-coding RNA expression profile associated with malignant progression of oral submucous fibrosis 0.07
RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms, and GTPase binding in bipolar disorder 0.07
Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity 0.07
Super-enhancer-driven CCAT1 is co-activated by SOX2 and TP63 and promotes squamous cancer from esophagus, head and neck and lung [RNA-seq] 0.07
Super-enhancer-driven CCAT1 is co-activated by SOX2 and TP63 and promotes squamous cancer from esophagus, head and neck and lung 0.07
PTBP1 excludes UPF1 to protect long 3'UTRs from nonsense-mediated mRNA decay 0.07
Perlman syndrome nuclease DIS3L2 controls cytoplasmic non-coding RNAs and provides surveillance pathway for maturing snRNAs 0.07
GREB1 amplifies androgen receptor output in prostate cancer and contributes to antiandrogen resistance 0.07
Epigenetic alterations affecting transcription factors and signaling pathways in stromal cells of endometriosis 0.07
Epigenetic alterations affecting transcription factors and signaling pathways in stromal cells of endometriosis: Expression data (RNA-seq) 0.07
Isogenic patient-derived human iPSCs, wild-type or heterozygous for PIK3CA-E418K 0.07
Determination of tRNA aminoacylation levels by high throughput sequencing 0.07
Genome-wide transcriptome analysis of NIPBL iPSC and commited cardiomyoctes 0.07
BRD9 defines a novel SWI/SNF sub-complex and constitutes a specific vulnerability in malignant rhabdoid tumors 0.07
Identification of differential expressed genes of JQ1 or JQ1+Bortezomib in colorectal cancer cells 0.07
Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes 0.07
HNRNPL and its RNA Targets in Prostate Cancer 0.07
Regulartory effect of HNRNPL and LARP on RNA expression in LNCaP prostate cancer cells 0.07
STRIPAK directs PP2A activity to promote oncogenic transformation 0.07
Genome-wide RNA-sequencing (RNA-seq) of benign and malignant prostate cell lines without and with androgen (R1881) stimulation. 0.07
RNA-seq analysis of the role of HBO1 (KAT7/MYST2) in the ovarian cancer cell line UWB1.289. 0.07
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling 0.07
Disruption of the exocyst induces podocyte loss and dysfunction 0.07
Joint-specific DNA transcriptome signatures in rheumatoid arthritis [RNA-seq] 0.07
The contribution of Alu exons to the human proteome 0.07
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 0.07
TCF21 and Aryl-hydrocarbon receptor gene cooperate to activate a pro-atherosclerotic gene expression program 0.07
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq Human] 0.06
Mapping of DHT-responsive or -independent AR-binding sites induced by activated Src in prostate cancer cell lines [RNA-seq] 0.06
Mapping of DHT-responsive or -independent AR-binding sites induced by activated Src in prostate cancer cell lines 0.06
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 0.06
Tumor hypoxia causes DNA hypermethylation by reducing TET activity (RNA-Seq) 0.06
Tumor hypoxia causes DNA hypermethylation by reducing TET activity 0.06
Gene expression changes after LOC550643 silencing 0.06
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 0.06
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 0.06
ARID1A is a critical regulator of luminal identity and therapeutic response in oestrogen receptor-positive breast cancer (RNA-Seq) 0.06
Global analysis of ZNF217 chromatin occupancy in the breast cancer cell genome reveals an association with Eralpha 0.06
Paclitaxel plus Cirmtuzumab Achieves Greater Clearance of Patient-derived Xenografts By Targeting ROR1+ Breast Cancer Stem Cells 0.06
RNA-seq identifies novel lncRNAs involved in vascular smooth muscle cell proliferation 0.06
Meta-organization of Translation Centers Revealed by Proximity Mapping of Endoplasmic Reticulum Ribosome Interactors 0.06
Transcriptional profiling of LS1034 cells treated with tepoxalin 0.06
Uridylation-mediated RNA quality control pathway in mammalian cytoplasm [RNA-Seq] 0.06
TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. 0.06
Targeting the androgen receptor N-terminus via the cochaperone Bag-1L 0.06
RNA-Guided Human Gene Activation by Cas9/CRISPR-Based Engineered Transcription Factors 0.06
A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors 0.06
Tumor exosome integrins determine organotropic metastasis 0.06
RNA sequencing Facilitates Quantitative Analysis of luminal breast cancer cells and basal breast cancer cells Transcriptomes 0.06
Transcript abundance in A-T-derived iPSC: Comparing isogenic cells to unrelated individual 0.06
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 0.06
Lentiviral CRISPR Epigenome Editing of Inflammatory Receptors as a Gene Therapy Strategy for Disc Degeneration 0.06
RNA-seq analysis of control and Myc-induced U2OS cells 0.06
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 0.06
hnRNP L protects mRNAs from nonsense-mediated mRNA decay 0.06
Metabolic reprogramming of Kaposi’s sarcoma associated herpes virus infected B-cells in hypoxia 0.06
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 0.06
Poly(A)-ClickSeq resolves CF25-mediated alternative poly-adenylation, HeLa 0.06
Functional Importance of eRNAs for Estrogen-dependent Gene Transcriptional Activation 0.05
Analysis of gene expression in SKOV3 ovarian cancer cells after knockdown of the long non-coding RNA DNM3OS 0.05
NKX2.2 0.05
RNA-Seq analysis of NKX2.2 knockdown in human pancreatic islets 0.05
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 0.05
Targeted reactivation of FMR1 transcription in FXS embryonic stem cells 0.05
Age-Related Gene Expression Changes in Prostate Cancer Patients 0.05
Age-Related Gene Expression Changes in Prostate Cancer Patients [RNA-Seq] 0.05
Sensing self and nonself circular RNAs 0.05
CRISPR activation of long non-coding RNAs transiently expressed during cortical neuron differentiation associated with Field, et al, Stem Cell Reports 2018 0.05
Identification of the O-GlcNAc-regulated alternative splicing events by performing RNA sequencing on HeLa cells with altered O-GlcNAc level. 0.05
Human serum and heparin-free platelet lysate as appropriate xeno-free alternatives for production of human MuStem cell batches 0.05
Cell Type-Specific Chromatin Signatures Underline Regulatory DNA Elements in Human Induced Pluripotent Stem Cells and Somatic Cells 0.05
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq] 0.05
Next Generation Sequencing upon siRNA-mediated knockdown of EIF5A in MCF-7 cells. 0.05
Hydrogel scaffolds promote neural gene expression and structural reorganization in human astrocyte cultures 0.05
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes 0.05
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] 0.05
Evaluation of the immunogenicity of live-attenuated influenza vaccines in nasal epithelial cells in primary differentiated human nasal epithelial cells [RNA-Seq] 0.05
Evaluation of the immunogenicity of live-attenuated influenza vaccines in nasal epithelial cells in primary differentiated human nasal epithelial cells 0.05
Bone marrow-derived and dental pulp-derived human mesenchymal stem cell RNA-Seq 0.05
RNA-seq and ChIP-seq analysis of BMI1 or RING1B-silenced prostate cancer cells C4-2 0.05
Genome-wide Dose-dependent Inhibition of Histone Deacetylases Reveals Their Roles in Enhancer Remodeling and Suppression of Oncogenic Super-enhancers 0.05
Differential YAP expression in glioma cells induces cell competition and promotes tumorigenesis 0.05
TRIM28-Regulated Transposon Repression Is Required for Human Germline Competency and Not Primed or Naive Human Pluripotency 0.05
Perivascular signals alter global genomic profile of glioblastoma and response to temozolomide in a gelatin hydrogel 0.05
RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons 0.05
Transcriptome profiling of Caki2 cells re-expressing Polybromo-1 (PBRM1) 0.05
Identification of transcripts altered upon LIN-41 knockdown in human embryonic stem cells 0.05
Nudt3 is a mRNA Decapping Enzyme That Modulates Cell Migration 0.05
Global response to chemotherapy-induced apoptosis 0.05
Role for citron kinase in prostate cancer growth 0.05
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential 0.05
Enriched EWSR1 and EWS-FLI1 RNA-seq of HNRNPH1-silenced TC32 Ewing sarcoma and 293T human embryonic kidney cells. 0.05
Effect of estrogen (E2) treatment on the C4-12 relative to the MCF7 cells 0.05
mRNA sequencing analysis of cultured human primary airway epithelial cells upon exposure to PMN exosomes 0.05
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] 0.05
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice 0.05
Studying the selectivity of a targeted small molecule degrading a hypoxia-associated non-coding RNA 0.05
Androgen Receptor-regulated genes in prostate cancer cells 0.05
RNA-seq profiling identifies Androgen Receptor-regulated genes in prostate cancer cells 0.05
Lipid catabolism inhibition sensitizes prostate cancer cells to antiandrogen blockade 0.05
Bromodomain inhibition of the transcriptional coactivators CBP/EP300 as a therapeutic strategy to target the IRF4 network in multiple myeloma 0.05
Bromodomain inhibition of the transcriptional coactivators CBP/EP300 as a therapeutic strategy to target the IRF4 network in multiple myeloma (RNA-Seq) 0.05
Global Mapping of Human RNA-RNA Interactions 0.05
lncRNA-PCAT1 knockdown effect on the gene expression of androgen independent LNCaP (LNCaP-AI) cell line 0.05
Identification of an IL-1-induced gene expression pattern in AR+ PCa cells that mimics the molecular phenotype of AR- PCa cells 0.04
Expression data for hiPSC-derived RPE treated with 10mM Nicotinamide or vehicle 0.04
Complete deconvolution of cellular mixtures based on linearity of transcriptional signatures 0.04
Osmostress induced changes of chromatin architecture and transcription in mammalian cells 0.04
Osmostress induced changes of chromatin architecture and transcription in mammalian cells [RNA-Seq, HiC] 0.04
Genome-wide maps of chromatin state and Gene Expression Profiling in HCT116 cells 0.04
Gene Expression Profiling of WT and KDM3A Knocked out Cell 0.04
m6A-RNA mapping, SND1-RNA binding profile mapping and SND1-depletion in KSHV-infected B-lymphocytes 0.04
Clinical and genomic crosstalk between glucocorticoid receptor and estrogen receptor α in endometrial cancer 0.04
Clinical and genomic crosstalk between glucocorticoid receptor and estrogen receptor α in endometrial cancer [RNA-seq] 0.04
RING-finger protein 6 amplification activates JAK/STAT3 pathway by modifying SHP-1 ubiquitylation and associates with poor outcome in colorectal cancer 0.04
Effect of selective glucocorticoid receptor modulation (SGRM) on gene expression in human prostate cancer cell lines 0.04
Lysine benzoylation is a novel histone mark 0.04
Lysine benzoylation is a novel histone mark [RNA-seq] 0.04
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons 0.04
Gene expression profiles of isogenic single-cell derived clones of BRAF-mutated SK-MEL-5 melanoma cell lines 0.04
CDK4/6 inhibitor resistance in prostate cancer 0.04
Expression profiling by high throughput sequencing of tumors derived from human prostate epithelial cells transformed with the oncogenes N-Myc and myrAKT1. 0.04
TOP2B disturbed the quality of human oocytes with advanced maternal age 0.04
Single Cell Sequencing Reveals Gene Expression Signatures Associated with Bone Marrow Stromal Cell Subpopulations and Time in Culture [NGS_bulk cell RNA-seq] 0.04
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons 0.04
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons [RNA-Seq] 0.04
RNA-seq analysis identifies different transcriptomic types and developmental trajectories of primary melanomas 0.04
Functional role of CPPED1 in trophoblasts. 0.04
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes 0.04
Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk 0.04
Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk [RNA-seq] 0.04
Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 0.04
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase 0.04
RNA sequencing (RNA-SEQ) of Human endothelial cells (HUVEC) in LFS, sFRP2OE, and WT conditioned media 0.03
TGF-b-activated LncRNA LINC00115 is a critical regulator for glioma stem-like cell tumorigenicity 0.03
Mesothelioma xenografts in nude mice: PBS treated versus pirfenidone treated 0.03
4sU-seq of HFF exposed to salt and heat stress 0.03
Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma 0.03
mRNA-seq from Nutlin-3a, doxorubicin, and DMSO treated HCT116 p21-/- cells 0.03
Next generation sequencing identifies discrete classes of box C/D snoRNAs featuring different ends and RNA binding protein dependency 0.03
Elongation Factor TFIIS Prevents Transcription Stress and R-Loop Accumulation to Maintain Genome Stability 0.03
Elongation Factor TFIIS Prevents Transcription Stress and R-Loop Accumulation to Maintain Genome Stability [ RNA-seq] 0.03
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer [RNA-seq] 0.03
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer 0.03
Genes regulated by soluble guanylyl cyclase in VCaP prostate cancer cells 0.03
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 0.03
Oncogenic MYC induces a dependency on the spliceosome in human cancer 0.03
Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma using high throughput RNA sequencing 0.03
Next Generation Sequencing Facilitates Quantitative Analysis of SW480 cells and HPSE-knockdown SW480 cells Transcriptomes 0.03
A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters 0.03
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] 0.03
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells 0.03
siRNA-mediated silencing of ORAI3 in MDA-MB-468 breast cancer cells exposed to hypoxia 0.03
Integrated Multi-omic Analysis of Esthesioneuroblastomas Identifies Two Subgroups Linked to Cell Ontogeny 0.03
Silencing SPIB in attached and floating state of H1703 lung cancer cells 0.03
RNA sequencing of prostate cancer and normal tissue from African Americans and European Americans 0.03
DNMT1-associated long non-coding RNA regulate global gene expression and DNA methylation in colon cancer 0.03
RNA sequencing with KSHV infection and enrichment for circular RNAs 0.03
SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer 0.03
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells 0.03
Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease 0.03
High-throughput sequencing of the human hepatic progenitor cell niche in PSC and HCV. 0.03
IMP3 regulated gene expression in breast cancer cells 0.03
Effects of a nutritional supplement in older individuals subject to ten days of complete bed rest. 0.03
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 0.03
DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats 0.03
ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin 0.03
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 0.03
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 0.03
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells 0.03
DGCR8 acts as a novel adaptor for the exosome complex to degrade double-stranded structured RNAs 0.03
Direct identification of endogenous SMG6 targets and a preferred motif spanning SMG6 cleavage sites by parallel analysis of RNA ends in human cells 0.03
LncRNA NMR knockdown and overexpression in esophageal squamous cell carcinoma cell lines 0.03
Histone demethylase LSD1 is required for germinal center formation and BCL6 driven lymphomagenesis 0.03
Transcriptional changes in lymphoma cells induced by LSD1 depletion 0.03
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling 0.03
Gene expression changes in HSV-1 infected HeLa cells with knockdown of B2M 0.03
Oncogenic Antisense LncRNA P14AS Regulates Expression of ANRIL through AUF1 Binding 0.03
Hyperactive mTOR and MNK1 phosphorylation of eIF4E confer tamoxifen resistance and estrogen independence through selective mRNA translation reprogramming 0.02
Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer 0.02
Tracing Enhancer Networks using Epigenetic Traits (TENET) 0.02
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique 0.02
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 0.02
SMUG1 promotes telomere maintenance through telomerase RNA end-processing 0.02
Maternal-biased H3K27me3 correlates with paternal-specific gene expression in the human morula 0.02
Transcriptome analysis of human airway epithelium infected by Human Bocavirus 1 0.02
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 0.02
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 0.02
Modeling Human Cancer-induced Cachexia (Human) 0.02
EWSR1 influences alternative splicing through direct and indirect mechanisms 0.02
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] 0.02
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 0.02
An Argonaute phosphorylation cycle promotes microRNA-mediated silencing [whole transcriptome RNA-seq] 0.02
Knockdown of FOXP1 promotes the development of lung adenocarcinoma 0.02
Exploring the role of macroH2A1 in transcription regulation in IMR90 primary human lung fibroblasts with RNA-seq and ChIP-seq 0.02
RNA-seq from control and macroH2A1-depleted IMR90 primary human lung fibroblasts 0.02
Effect of Polybrominated diphenyl ethers (PBDEs) on gene expression of MCF7 cells 0.02
CRISPR/Cas9 Screens Reveal Epstein-Barr virus Synthetic Lethal Targets 0.02
RNA-sequencing of tamoxifen-resistant and -sensitive breast cancer cell lines. 0.02
RNA-Seq analysis of prostate cancer cell line LNCaP treated with vehicle, androgen, androgen and IMTPPE, androgen and JJ-(+)-450, androgen and JJ-(-)450, androgen and enzalutamide 0.02
Next generation sequencing of advanced non-castrate prostate cancer treated with docetaxel chemotherapy 0.02
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing (Total RNA sequencing) 0.02
RNA-seq of cancer cell lines treated with T-025 0.02
Transcriptome profiling of omental adipose tissues in human obesity by RNA-Seq 0.02
RNA profiling Analysis of the Serum Exosomes Derived from Active and Latent M.tuberculosis infectious Patients 0.02
Dissection of estrogen receptor alpha signaling pathways in osteoblasts using RNA-sequencing 0.02
A Phase II Study of Pomalidomide, Daily Low Dose Oral Cyclophosphamide, and Dexamethasone in Relapsed/Refractory Multiple Myeloma 0.02
Cajal bodies are linked to genome conformation 0.02
Cajal bodies are linked to genome conformation [RNA-Seq] 0.02
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HCT116 cells treated with or without TNF-alpha 0.02
LncRNA-GAS5 negative regulation of YAP-target genes expression 0.02
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq] 0.02
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells 0.02
Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 0.02
Gene expression analysis of C4-2 cells treated with ACLY inhibitor and Enzalutamide 0.02
Preclinical model of obesity and ER-positive breast cancer 0.02
Immunophenotyping and Transcriptomic Outcomes in PDX-Derived TNBC Tissue 0.01
Genome-wide RNA-sequencing of human islets 48 hour after transduction with adenoviruses expressing either GFP (control), or histone chaperone ASF1B. 0.01
Canonical and non-canonical regulatory roles of androgen receptor variant 7 in prostate cancer 0.01
RNA-Sequencing of HUVEC treated with Tie2 activating antibody 0.01
Viral shRNA Knockdown of INS Promotor Activity in EndoC-βH1 Cells  0.01
4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells 0.01
T47D xenografts treated with various combinations of ER- and PR-targeting therapies 0.01
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 0.01
Gene expression profiling of LNCaP cells following shRNA-mediated knockdown of TMEFF2 and growth in presence and absence of dihydrotestosterone 0.01
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 0.01
RNA sequencing analysis of selumetinib-resistant CRC cells lines 0.01
Mutation independent activation of the Notch pathway is associated with Lapatinib resistance in Her2+ breast cancer cell lines 0.01
Comparative Analysis of Cas9 Activators Across Multiple Species 0.01
Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis 0.01
A cell-permeable stapled peptide inhibitor of the estrogen receptor/coactivator interaction 0.01
The IMiDs, through loss of Ikaros and Aiolos, primes myeloma cells for daratumumab mediated killing by upregulation of CD38 0.01
Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics 0.01
In vivo genome editing restores dystrophin expression in Duchenne muscular dystrophy patient muscle fibers 0.01
HLA peptides derived from tumor antigens induced by inhibition of DNA methylation for development of drug-facilitated immunotherapy 0.01
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration [RNA-seq2] 0.01
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs 0.01
Combined inhibition of STAT3 and DNA repair in palbociclib-resistant ER-positive breast cancer 0.01
Comparison of 7 small cell lung cancer PDX models, cultured ex vivo, for response to LSD1 inhibitor RG6016/ORY1001 0.01
RelA mutants 'reconstituted' and cell cycle synchronized HCT116 Colorectal Cancer Cells 0.01
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 0.01
RNA sequencing from FOXM1 knockout HEK293T cells reconstituted with FOXM1 isoforms a, b and c. 0.01
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.01
HNRNPM-regulated splicing dependencies in prostate cancer [RNA-Seq] 0.01
HNRNPM-regulated splicing dependencies in prostate cancer 0.01
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 0.01
Transcriptome analyses of human pancreatic islets and pseudoislets 0.01
Expression profiling of MCF-7 cells with treatment of TCDD 0.01
Expression profiling of MCF-7 cells with 10nM treatment of TCDD 0.01
Distinct structural classes of activating FOXA1 alterations in prostate cancer progression 0.01
Distinct structural classes of activating FOXA1 alterations in prostate cancer progression [RNA-Seq] 0.01
Identification of global XBP1s target gene expression in human prostate cancer cells 0.01
Transcriptome analysis of BAP1 knockout and restoration 0.01
Expression profiles of restoration of BAP1 in a BAP1 deficient cell line 0.01
Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients 0.01
Landscapes of gene translation in hepatocellular carcinoma tumors revealed by ribosome profiling 0.01
Finding missing proteins from epigenetically manipulated human cells 0.01
Gene expression of thyroid cancer cell lines 0.01
Genetic regulation of human adipose microRNA expression and its consequences for metabolic traits 0.01
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells (Poly(I:C) and LPS) 0.0
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 0.0
CNOT1 and Transcriptomic Landscape of a HeLa Cell Line 0.0
SREBP1 drives Keratin 80-dependent cytoskeletal changes and invasive behavior in endocrine resistant ERα breast cancer 0.0
Modeling genome-wide transcriptional cis-regulation in n LNCaP-abl cell line after siRNA knock down of a series of gene factors [RNA-seq] 0.0
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development 0.0
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq] 0.0
Genome-wide search for differentially expressed RNAs responsible for the effects induced by Ebola virus replication and transcription 0.0
Modulation of ESRP2 and MBNL2 in normal kidney and clear cell renal cell carcinoma cell lines for analysis of stability programs 0.0
RNA-seq data of small cell carcinoma of the bladder (SCCB) /urothelial carcinoma (Non-SCCB) clinical samples, and bladder-PARCB cell lines 0.0
RNA-sequencing of formalin fixed human primary melanoma tissue 0.0
BRD9 defines a novel SWI/SNF sub-complex and constitutes a specific vulnerability in malignant rhabdoid tumors [RNA-seq 2] 0.0
RNA-seq analysis of SLIRP knockdown with 1nM DHT in LNCaP cells 0.0
The role of CFTR in islet function 0.0
RNA-seq of exosomes identifies lncRNA profiles that distinguish early-stage esophageal squamous cell carcinoma (ESCC) from non-malignant esophagitis 0.0
Diffuse Large B Cell Lymphoma cell line with Acquired Resistance to PI3Kδ Inhibitor Idelalisib 0.0
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins 0.0
hnRNP C is a key regulator of protein synthesis in mitosis 0.0
Genome-wide Circadian Control of Transcription at Active Enhancers Regulates Insulin Secretion and Diabetes Risk 0.0
Pancreatic Beta Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes 0.0
Mutational landscape of splicing genes and functional consequences across 33 cancer types 0.0
Cell responses to dysregulated VZV-induced cell-cell fusion 0.0


Contact Us

For scientific and technical queries contact Butte Lab @UCSF


Cite GENEVA Tool

Manuscript in Preparation