Gene Query: CCDC28A

Dataset Description Geneva Score
Interaction with WDR5 recruits MYC to a small cohort of genes required for tumor onset and maintenance 23.67
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 16.34
JAK2 is dispensable for maintenance of JAK2 mutant B-cell acute lymphoblastic leukemias 14.07
Comparative gene expression profiling of MHH-CALL4 cells subject to pharmacological JAK2 inhibitor treatment (ruxolitinib or CHZ868) or shRNA-mediated JAK2 depletion in vitro 14.07
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 13.76
Lineage tracing of acute myeloid leukemia reveals the impact of hypomethylating agents on chemoresistance selection 12.27
Transcriptional Modulation of Human Endogenous Retroviruses in Primary CD4+ T Cells Following Vorinostat Treatment 10.26
Genome-wide profiling of siRNA targeting EWS-FLI1 in TC32 Ewing sarcoma cell line 9.72
A comprehensive single cell transcriptional landscape of human hematopoietic progenitors 9.45
Appropriately Differentiated ARPE-19 Cells Regain a Native Phenotype and Similar Gene Expression Profile 9.41
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing 8.92
DART-seq: an antibody-free method for global m6A detection 7.91
Transcriptome analysis of SKI knock-out in HL60 cells 7.88
Combined cistrome and transcriptome analysis of SKI in AML cells identifies SKI as a co-repressor for RUNX1 7.88
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential 7.81
DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats 6.98
Identification of alternatively spliced transcripts in brain metastatic derivatives of MDA-MB-231 breast cancer cells in response to RBM47 expression 6.57
The identification of RBM47 binding sites and RBM47-dependent alternative splicing events in brain metastatic breast cancer cells 6.57
Single-cell RNA-seq reveals novel cell differentiation dynamics during human airway epithelium regeneration 6.53
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 6.33
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 6.33
Radiomic and gEnomic approaches for the enhanced DIagnosis of REnal Cancer (REDIRECt): A translational pilot study 6.09
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia [RNA-seq] 5.91
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia 5.91
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients 5.9
Hypoxic transcriptome of SQ20B human head and neck cancer cells 5.89
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [RNA-seq] 5.86
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo 5.86
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 5.76
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 5.75
Single cell RNA-seq resolves lineage-specific activation dynamics of human blood and tissue T cells 5.68
Transcriptome of diurnal human blood neutrophils 5.38
Hijacking of stress response machinery by oncogenes in acute leukaemia [RNA-seq] 5.36
Hijacking of stress response machinery by oncogenes in acute leukaemia 5.36
Isolation and Transcriptome Analyses of Human Erythroid Progenitors: BFU-E and CFU-E 5.31
RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs 5.3
RNAseq of PRMT4KD in human cord blood derived CD34+ cells 5.15
A single cell reference map for human blood and tissue T cell activation 5.0
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures 4.94
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures [RNA-Seq] 4.94
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation 4.88
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] 4.88
Unique features and clinical importance of acute alloreactive immune responses 4.87
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements 4.82
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements [RNA-seq] 4.82
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates 4.57
Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease 4.45
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes 4.39
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] 4.39
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 4.38
Global epigenomic reconfiguration during mammalian brain development 4.03
Mapping interactions for the TNIP2 hub protein 4.02
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 3.98
RNA-seq of tumor cells following angiopellosis extravasation 3.94
Response of HEK293 Freestyle cells to 36 h of culture in Zn(II)-depleted Freestyle medium 3.93
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells 3.92
RNAseq analysis of the human neutrophil transcriptome, with and without in vitro cytokine stimulation 3.88
CROP-Seq in Primary Human T Cells 3.79
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 3.66
TOP2B disturbed the quality of human oocytes with advanced maternal age 3.65
Heterogeneous maintenance of human tissue resident memory T cells based on efflux capacities 3.62
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 3.57
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits [mRNA-Seq] 3.54
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits 3.54
TGFβ-induced fibroblast activation requires persistent and targeted HDAC-mediated gene repression 3.52
Integrating single-cell transcriptomic data across different conditions, technologies, and species 3.5
Highly-motile versus unsorted MDA-MB-231 breast cancer cells 3.47
PolyA-sequencing in Kelly and Kelly E9R neuroblastoma cells treated with THZ531 or DMSO 3.41
Gene expression analysis of human CD8+ T cells treated with a DOT1L inhibitor 3.36
Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during Epithelial-to-Mesenchymal Transition [RBM47 KD] 3.33
Maintaining iron homeostasis is the key role of lysosomal acidity for cell proliferation 3.3
Retinoic Acid Induced Transcriptional Repressor HIC1 is Required for Suppressive Function of Human Induced Regulatory T cells [RNA-Seq 1] 3.21
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 3.18
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [HCC1599_RNA-seq] 3.15
RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons 3.14
RNA-seq of HBV-infected Primary Human Hepatocytes treatment by Tazarotene 3.12
CXCR4 regulates extra-medullary myeloma through epithelial-mesenchymal transition-like transcriptional activation 3.09
PANC-1 and AsPC-1 human pancreatic carcinoma cells under hypoxia, nutrient starvation and low pH culture condition 3.05
Gene expression in PANC-1 and AsPC-1 human pancreatic carcinoma cells under hypoxia, nutrient starvation and low pH culture condition. 3.05
Comprehensive comparative analysis of 5’ end RNA sequencing methods 3.01
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition. 2.99
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition [RNA-Seq] 2.99
The impact of stanniocalcin 1 on the transcriptome of human cord blood stem/progenitors 2.98
Charaterization of genetic alterations and gene expression signatures found in BCR-ABL inhibitor-resistant KCL-22 subpopulations and single clones 2.91
The comparison of high-throughput single-cell RNA-seq methods 2.89
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 2.84
PolyA-sequencing in IMR-32 cells treated with THZ531 or DMSO 2.84
Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation 2.78
Amiloride, an old diuretic drug, is a potential therapeutic agent for multiple myeloma 2.77
RNA-Sequencing of human dermal lymphatic endothelial cells (HDLEC) treated with siRNA targeting YAP/TAZ and YAP5SA 2.75
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition [RNA-Seq] 2.75
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition 2.75
RNA-Seq in neutrophils from Antiphospholipid Syndrome 2.74
RNA-seq analysis of differentiating human erythroblasts 2.74
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 2.72
RNA-seq of ASXL2 shRNA KD in SKNO-1 cells 2.71
Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods 2.68
Hsa-miR-371a-5p and hsa-miR-518a-3p regulated genes in choriocarcinoma cells 2.65
Polysome-associated mRNA profiling of cancer cells in response to CXCL12 and IGF1 2.65
Transcriptome-wide analysis of the role of HTLV-1 Tax PBM in T-Cells from infected humanized-mice (hu-Mice) 2.65
A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (RNA-seq) 2.63
A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia 2.63
Generation and persistence of human tissue-resident memory T cells in lung transplantation 2.63
T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment 2.6
Gene expression in TAL1-driven T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment 2.6
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells (RNA-seq) 2.57
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells 2.57
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos 2.57
Gene expression signatures of innate lymphoid cells from human blood 2.45
m6A-seq data analysis of control and PCIF1 knockdown transcriptome 2.42
RNA-Guided Human Gene Activation by Cas9/CRISPR-Based Engineered Transcription Factors 2.41
AUF-1 affected genes in human skin cells 2.35
Heterozygous p53-R280T mutation promotes proliferation of NPC cells through activating PI3K/Akt signaling pathway 2.33
RNA sequencing of erythroid and granulomonocytic colonies differentiated from transduced bone marrow CD34+ cells expressing U2AF1 S34F mutation, U2AF1 wild-type or empty vector control 2.3
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [RNA-Seq] 2.29
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition 2.29
Human Long Intergenic Noncoding RNA Linc-ADAL Knockdown in Mature Adipocytes using Lentiviral ShRNA 2.28
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma shRNA Clone TRCN0000005418 targeting RIOK3 with puromycin selection RNAseq 2.28
Control of human hemoglobin switching by LIN28B-mediated regulation of BCL11A translation (Ribo-seq, RNA-seq) 2.22
Identification of renal resident macrophages across species 2.21
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 2.19
Identification of the networks that regulate human monocytic myeloid-derived suppressor cell differentiation into inflammatory macrophages 2.19
Transcriptomics of human macrophages upon infection with Legionella pneumophila and two isogenic mutants, LamA and AnkH using RNA-seq 2.18
Human primary macrophages derived in vitro from circulating monocytes comprise adherent and non-adherent subsets with differential expression of Siglec-1 and CD4 and permissiveness to HIV-1 infection 2.13
Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing 2.12
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 2.09
Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia 2.08
Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (RNA-seq) 2.08
Profiling of lung tumor-infiltrating CD8 T cells according to their expression status of CD39 2.07
Identification of transcription start sites for human A549 cell line using ReCappable-seq 2.06
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 2.05
Global gene expression analysis of human monocyte-derived dendritic cells (DCs) treated with HMGN1 (N1) and R848 alone or in combination. 2.05
Designer epigenome modifiers enable robust and sustained gene silencing in clinically relevant human cells 2.03
Designer epigenome modifiers enable robust and sustained gene silencing in clinically relevant human cells [RNA-seq] 2.03
Propargite, an environmental chemical, interacts with GWAS identified diabetes genes to impact human pancreatic β-cell death 2.03
Effect of TUNAR silencing and GSK3 inhibition on human b-cell transcriptome 2.02
SETDB2 links E2A-PBX1 to cell cycle dysregulation in acute leukemia through CDKN2C repression [sequencing] 2.01
Novel Form of JARID2 is Required to Regulate Differentiation in Keratinocytes. 1.97
siRNA-mediated silencing of ORAI3 in MDA-MB-468 breast cancer cells exposed to hypoxia 1.97
Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration 1.97
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 1.96
RNA isoform screens reveal the essentiality and tumor suppressor activity of ultraconserved poison exons 1.96
PolyA+ RNA-seq in ALL-SIL upon TLX1 knockdown 1.95
LIN28A Over-expression RNAseq 1.95
A novel lncRNA lncRNA-AF339830 promotes colorectal carcinogenesis and glucose metabolism by stabilizing and specifying the transcription modification pattern of c-Myc 1.95
A novel lncRNA lncRNA-AF339830 promotes colorectal carcinogenesis and glucose metabolism by stabilizing and specifying the transcription modification pattern of c-Myc [RNA-Seq] 1.95
RNA-seq analysis in Cornea epithelial cells (CECs), skin epithelial cells (SECs), LSCs after knocking down PAX6 (3-D shPAX6 LSCs) and SESCs transduced with PAX6(3-D PAX6+ SESCs) upon 3-D differentiation 1.93
Enhancer Domains in Gastrointestinal Stromal Tumor Regulate KIT Expression and are Targetable by BET Bromodomain Inhibition [RNA-seq] 1.92
Enhancer Domains in Gastrointestinal Stromal Tumor Regulate KIT Expression and are Targetable by BET Bromodomain Inhibition 1.92
Sequential regulatory loops as key gatekeepers for neuronal reprogramming in human cells 1.91
Sequential regulatory loops as key gatekeepers for neuronal reprogramming in human cells [RNA-seq] 1.91
Single-cell analysis of adult human ovary using 10X genomics 1.88
Targeted inhibition of STAT/TET1 axis as a potent therapeutic strategy for acute myeloid leukemia 1.86
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HET] 1.85
Profiling of protrusion-enriched RNAs from human breast cancer cell line MDA-MB-231 1.85
Genome-wide Gene Expression Profiling in DLBCL Cell Lines Treated with CUDC-907 1.85
Rational targeting of cooperating layers of the epigenome yields enhanced therapeutic efficacy against AML 1.84
The Developmental Heterogeneity of Human Natural Killer Cells Defined by Single-cell Transcriptome 1.83
RNA-seq in neutrophils from Juvenile Idiopathic Arthritis 1.82
Transcriptome analysis of kidney organoids 1.81
NR4A1 Inhibition Synergizes with Ibrutinib in Killing Mantle Cell Lymphoma Cells 1.79
Transcriptome of human ILC2s; primary vs IL-1b-primed 1.76
Gene expression changes after LOC550643 silencing 1.76
Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity 1.74
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique 1.74
miCLIP, RNA-Seq, and Ribo-Seq in MOLM13 cells 1.73
A common cell state in Triple Negative Breast Cancers represents a druggable vulnerability 1.72
Next Generation Sequencing of control (Untreated), PAN injured and Adriamycin injured human podocytes 1.71
Global Gene Expression analysis of CUTLL1 cell lines after treatment with Perhexiline 1.71
Gene-Centric Functional Dissection of Human Genetic Variation Uncovers Regulators of Hematopoiesis 1.7
Apoptosis enhancing drugs overcome innate platinum resistance in CA125 negative tumor initiating populations of high grade serous ovarian cancer 1.7
Zone dependent distinctive gene expression profile of the normal human liver tissue 1.69
Control of human hemoglobin switching by LIN28B-mediated regulation of BCL11A translation 1.65
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia 1.64
Rational targeting of RNA structure in SMN2 transcripts reverses Spinal Muscular Atrophy molecular phenotypes 1.64
Identification of monocyte-like precursors of granulocytes as a mechanism for accumulation of PMN-MDSC in cancer 1.64
The Human Testis Cell Atlas via Single-cell RNA-seq 1.63
Generation of Patient-Matched Malignant and Normal Primary Cell Cultures from Clear Cell Renal Cell Carcinoma Patients 1.62
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 1.62
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells 1.62
Co-transcriptional loading of RNA export factors shapes the human transcriptome 1.61
RNAseq of HEK293 cells after Chtop knockdown 1.61
U2AF1 mutations alter splice site recognition in hematological malignancies 1.59
Human MAIT cells exit peripheral tissues and re-circulate via lymph in steady state conditions 1.57
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 1.56
Efficient derivation of microglia-like cells from human pluripotent stem cells 1.56
Quantitative Analysis of PPARD Transcriptomes in Colon Cancer Cells by Next Generation Sequencing (NGS) 1.56
Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases 1.54
RNA-Seq and expression data from human adipose tissue 1.54
B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis 1.54
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics] 1.53
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 1.53
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 1.52
The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation 1.52
Effects of Belinostat and Dexamethasone treatment of A549 gene expression 1.51
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (mRNA-Seq) 1.51
Alarmin S100A11 initiates a chemokine response to the human pathogen Toxoplasma gondii 1.49
BACH2 in human plasma cell fate decision 1.47
Transcriptomic profiling of cleavage-resistant RIPK1 induced autoinflammation syndrome patients 1.44
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 1.43
Regulating Interleukin-2 activity with engineered receptor signaling clamps 1.42
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [BAA] 1.42
GREB1 amplifies androgen receptor output in prostate cancer and contributes to antiandrogen resistance 1.42
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] 1.41
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition 1.41
RNA expression profiling of human mPB or CB-derived CD34+ cells treated with UM171 at different doses 1.41
Multiple sclerosis and EAE 1.4
Human optic chiasm from healthy controls and multiple sclerosis patients 1.4
SETBP1-WT and SETBP1-G870S transcriptional profiles [RNA-Seq] 1.4
SETBP1-WT and SETBP1-G870S epigenetic landscapes 1.4
Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens 1.37
KRASG12C inhibition produces a driver-limited state revealing collateral dependencies 1.37
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 1.36
Gene expression analysis of CD4+ and CD4- ILC1 subsets by RNAseq 1.36
Next Generation RNA Sequencing Analysis of AMPK Wild Type, AMPKα-KO and AMPKα1-2A U2OS cell Transcriptomes 1.36
mRNA expression profiling in MDA-MB-231 (LM1) cells with a tet-incible MBD2 or p66α knock down, or treated with MBD2-targeting small molecule ABA or APC 1.36
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 1.35
The Notch driven long non-coding RNA repertoire in T-cell acute lymphoblastic leukemia 1.34
RNA sequencing of 13 T-cell acute lymphoblastic leukemia patients (5 TCRAD-MYC translocated T-ALL_8TAL1-LMO2 T-ALL) 1.34
Identifying the molecular mode of action of itraconazole in colorectal cancer 1.33
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing [RNA-Seq] 1.33
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing 1.33
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 1.32
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 1.29
Identification of IL-27 as potent regulator of inflammatory osteolysis associated with vitamin E-blended ultra-high molecular weight polyethylene debris of orthopedic implants 1.29
Transcriptomes of iPSC-derived and post-mortum Hypothalamus Neurons from obese and control donors 1.27
Changes in CD34 and Erythroid Progenitor Transcriptome After RUNX3 Kock-down 1.27
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo 1.26
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo [RNA-Seq] 1.26
N6-methyladenosine Recruits HNRNPG for Alternative Splicing Regulation 1.25
Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways 1.23
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) 1.23
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation 1.23
Targeting MTHFD2 in Acute Myeloid Leukemia 1.23
Whole transcriptome profile of citrulline-specific B cells from patients with rheumatoid arthritis 1.22
RNA-seq analysis of control and CDK12-depleted ovarian cancer cells 1.22
Molecular analysis of renal cell carcinoma with unclassfied histology 1.21
Molecular analysis of renal cell carcinoma with unclassfied histology [gene expression] 1.21
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (ALK) 1.21
Stem cell and neurogenic gene-expression profiles link prostate basal cells to aggressive prostate cancer 1.21
Biological effect of chronic mistranslation in mammalian cells 1.19
Transcriptional profiling of microglia; current state of the art and future perspectives 1.19
MOV10 Is a 5' to 3' RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3'UTRs 1.18
MOV10 Is a 5' to 3' RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3'UTRs (expression) 1.18
Developmental stage specific chromosome architecture in human erythroid cells 1.17
Developmental stage specific chromosome architecture in human erythroid cells (RNA-seq) 1.17
Sequencing of messenger RNAs with N6-methyladenosine modifications in acute myeloid leukemia (AML) with and without forced expression of FTO 1.17
Ebola virus (EBOV) infection of ARPE-19 cells 1.17
Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma 1.17
RNA sequencing of heart samples of myotonic dystrophic (DM1) patients 1.16
Generating Patterned Kidney Organoids for Studying Development and Diseases 1.16
Gene expression profiles of 4-1BB+PD-1-high, 4-1BB-PD-1-high, and PD-1-int tumor-infiltrating CD8 T cells in hepatocellular carcinoma 1.16
Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates 1.15
MALT1 Inhibition Is Efficacious in Both Naïve and Ibrutinib-Resistant Chronic Lymphocytic Leukemia. 1.15
Next Generation Sequencing Facilitates Quantitative Analysis of SW480 cells and HPSE-knockdown SW480 cells Transcriptomes 1.14
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium [RNA-Seq] 1.14
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium 1.14
Different Temporal Effects of Ebola Virus VP35 and VP24 Proteins on Global Gene Expression in Human Dendritic Cells 1.13
Characterisation of the myeloid differentiation process of human hematopoietic stem cells 1.13
Human Treg NaCl stimulation 1.12
A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters 1.12
Sirt6 Oncogene Mediates PI3K/Akt Signaling Activation in Diffuse Large B-Cell Lymphoma 1.12
eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants 1.12
Expression levels of genes of NKG2C+ NK cells after in vitro treatment 1.11
CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia 1.11
Transcriptome changes due to nuclear penetration of cancer extracellular vesicles 1.11
RNA deep sequencing to compare genome-wide differences between PRMT5/knockdown and control AML cells 1.1
Enhancement of Human B Cell Differentiation and Function in Lymph Nodes by the TLR9 Agonist MGN1703 1.1
Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants 1.08
Nuclear import of the DSCAM-cytoplasmic domain drives signaling capable of inhibiting synapse formation 1.08
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 1.06
RNAseq to determine whether bidirectional transcription occurs over transposable elements following depletion of SETDB1 in THP-1 AML Cells 1.05
Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer 1.05
Transcriptional changes in pancreatic cancer cells associated with gemcitabine resistance 1.04
IL-21/type I interferon interplay regulates neutrophil-dependent innate immune responses to Staphylococcus aureus 1.04
Transcriptional effect of ETV1 knockdown in melanoma cells 1.04
Analysis of transcriptomes of healthy donor and CD46 deficient CD8 T cells 1.04
Transcriptome analysis of CD8+ T cells from healthy controls and patients wth CD46 deficiency 1.04
RNA-Seq data of NCI-H82 cells expressing a Dox-On pRB (pTripZ RB1) grown in the presence or absence of DOX and then treated with vehicle or AZD2811. 1.03
Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 1.03
Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 1.03
Stem and effector CD8 T-cells from human cancers 1.01
Targets of CDK12 on ZR-75-30 breast cancer cells (RNA-seq) 1.01
A Stable Transcription Factor Complex Nucleated by Dimeric AML1-ETO Controls Leukaemogenesis 1.0
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 1.0
RNA sequencing, chromatin accesibility and ChIP seq analysis of BAP1 -/- human liver organoids 0.99
A Basal Stem Cell Signature Identifies Aggressive Prostate Cancer Phenotypes 0.99
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [mutant MEF2C] 0.99
RNA deep sequencing analysis of human brain microvascular endothelial cells (ECs) treated with glioma-conditioned medium (glioma-CM) 0.99
Cystathionine-β-Synthase Promotes Colon Carcinogenesis 0.98
Isolation and sequencing of AGO-bound RNAs reveals characteristics of stem-loop processing in vivo 0.98
Study functions of ADAR proteins using next generation sequencing of genome and transcriptome 0.98
Tpl-2 small molecule project 0.97
Tpl-2 and MEK small molecule inhibitors 0.97
EZH2 and BCL6 cooperate to assemble CBX8-BCOR Polycomb complex to repress bivalent promoters, mediate germinal center formation and promote lymphomagenesis 0.96
EZH2 and BCL6 cooperate to assemble CBX8-BCOR Polycomb complex to repress bivalent promoters, mediate germinal center formation and promote lymphomagenesis [RNA-seq] 0.96
Gene expression profile of differentially recognized Mtb-epitopes as a function of disease history 0.96
mRNA expression levels in splenic human mononuclear cells of mock- and HIV-1-infected humanized mice 0.96
Evaluating pre-clinical models for studying NASH driven HCC. 0.96
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis [RNA-seq] 0.96
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis 0.96
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 0.96
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 0.95
Defective transcription elongation in a subset of cancers confers immunotherapy resistance 0.95
Integrin signaling regulates YAP/TAZ to control skin homeostasis 0.95
Therapeutic targeting of GCB- and ABC-DLBCLs by rationally designed BCL6 inhibitors 0.94
High capacity of the endoplasmic reticulum to prevent secretion and aggregation of amyloidgenic proteins 0.94
Characterizing smoking-induced transcriptional heterogeneity in the human bronchial epithelium at single-cell resolution 0.94
Histone deacetylase inhibition enhances antimicrobial peptide but not inflammatory cytokine expression upon bacterial challenge 0.93
HEK293 TFAM Knockout Expression Study 0.91
Whole Transcriptome RNASeq Data for Cell-Sorted Antibody Secreting Cells (ASC) 0.91
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets 0.9
Transciptome profiling of NoDice and RNaseIII null cells prior to and after polyIC treatment 0.9
Human Treg IL-12 stimulation 0.9
Microenvironmental-derived Regulation of HIF-Signaling Drives Transcriptional Heterogeneity in Glioblastoma Multiforme 0.9
Polarized B -cell functions 0.9
Zika virus antagonizes interferon response in patients and disrupts RIG-I-MAVS interaction through its CARD-TM domains 0.89
Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma [RNA-Seq; normal samples] 0.88
Transcriptome analysis of human reninomas as an approach to understanding juxtaglomerular cell biology 0.87
Transcriptomic but not genomic variability confers phenotype of breast cancer stem cells 0.87
JAK/STAT inhibition in macrophages promotes therapeutic resistance by inducing expression of protumorigenic factors 0.85
Specific modulation of HIV RNA splicing and upregulation of anti-inflammatory miR-124 by the new drug candidate ABX464 0.85
Mitochondrial hypoxic stress induces RNA editing by APOBEC3G in lymphocytes 0.84
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 0.84
Effect of Hypoxia in Severe Preeclampsia through Epigenetic Regulation 0.84
RNA expression analysis upon JMJD1C depletion 0.83
JMJD1C is required for the survival of acute myeloid leukemia by functioning as a co-activator for key transcription factors 0.83
Transcriptional profile in human S. haematobium infection 0.83
Poly(ADP-ribose) polymerase 1 is necessary for coactivating hypoxia-inducible factor-1-dependent gene expression by Epstein-Barr virus latent membrane protein 1 0.82
RNA-Seq Samples of siTFE3 in 8988T PDA Cell Line to Investigate Transcriptional Control of the Autophagy-Lysosome System 0.81
RNA sequencing of primary human platelets and in vitro cell lines 0.8
Translating transcriptome of cancer cells in situ in mesenchymal-rich tumor microenvironment 0.8
CD1c+ dendritic cell activation by Plasmodium falciparum-infected red blood cells 0.79
mRNA gene expression profiling in a human AML cell line treated with small molecule inhibitors that impact different RNA polymerase transcription complexes, or their combination, in comparison to a global DNA-damaging anthracycline compound 0.79
RNA-seq analysis reveals endogenous aryl hydrocarbon receptor regulation is highly associated with eicosanoid synthesis and tumor necrosis factor activity in MCF-7 cancer cells 0.78
MeRIP-seq for heat shock in B-cell lymphoma cells 0.78
Parvovirus B19 NS1 protein induces cell cycle arrest at G2 phase 0.78
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration [RNA-seq2] 0.77
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α 0.77
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 0.76
Maternal-biased H3K27me3 correlates with paternal-specific gene expression in the human morula 0.76
Paclitaxel plus Cirmtuzumab Achieves Greater Clearance of Patient-derived Xenografts By Targeting ROR1+ Breast Cancer Stem Cells 0.75
EPCR Expression Defines the Most Primitive Subset of Human HSPC and Is Required for Their In Vivo Activity 0.75
Single Cell RNA-sequencing of cell types isolated by FACS from normal human prostates 0.73
TCR and inflammatory signals tune human MAIT cells to exert specific tissue repair and effector functions 0.73
5hmC and gene expression data in breast cancer cell lines treated with an antioxidant 0.72
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 0.72
Human Cord Blood Sorted Live Cell Erythroblasts RNA-Seq 0.71
Reprogramming of Tumor-infiltrating Immune Cells in Early Stage of NSCLC 0.71
Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq 0.71
Mesenchymal stem/stromal cell engulfment reveals metastatic advantage in breast cancer 0.7
RNAseq of human monocyte cell line (U937-Cas9) WT or IRF2KO 0.69
CAR T cell trogocytosis and cooperative killing regulate tumour antigen escape 0.69
Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses 0.69
FOXO1 is an oncogenic mediator in AML1-ETO leukemia 0.68
Single cell transcriptome of peritoneal cells 0.67
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.67
CRISPR adenine and cytosine base editors with reduced RNA off-target activities 0.65
CRISPR adenine and cytosine base editors with reduced RNA off-target activities [CBE] 0.65
Total RNA was extracted from three samples of CD33 CAR or control T cells from three different donors 0.64
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit 0.63
PolyA-sequencing in IMR-32 neuroblastoma cells with shRNA mediated depletion of CDK12, CDK13 or GFP. 0.63
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 0.62
Plasma cell mitochondrial pyruvate import controls the duration of humoral immunity. 0.62
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 0.58
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 0.58
Transcriptome analysis of human lung epithelial cells 0.58
A novel Menin-MLL inhibitor induces specific chromatin changes and eradicates disease in models of MLL-rearranged leukemia [RNA-Seq II] 0.58
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (RNA-Seq) 0.56
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma 0.56
Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins 0.56
Tissue-resident memory T cells mediate immune homeostasis in the human pancreas through the PD-1/PD-L1 pathway 0.55
MicroRNA-125a-5p overexpression in human macrophages 0.55
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 0.54
RNA-sequencing of the GSI treatment of the CUTLL1 cell line 0.53
Transcriptional landscape changes during human embryonic stem cell derivation 0.52
Effects of darunavir upon gene expression in kidney tubular cells after transduction with HIV or EGFP-control lentivirus 0.51
A stably self-renewing adult blood-derived induced neural stem cell exhibiting patternability and epigenetic rejuvenation 0.51
Expression of MERTK based on Multiple Sclerosis (MS) risk haplotype 0.5
Primary Human B-cell Temporal Response to CD40L Stimulation 0.5
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene 0.5
RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood 0.48
Transcriptome-wide analysis of IL2RA enhancer activation by CRISPRa 0.48
Combinatorial Reprogramming of Estrogen Signaling by the Nuclear Receptor Family 3C 0.46
Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell type specificity 0.45
Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [TMCC2] 0.45
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 0.45
Whole transcriptome splicing analysis in isogenic lung epithelial and adenocarcinoma cell lines with or without a recurrent splicing factor mutation, U2AF1 (S34F) 0.44
Gene expression alterations of pancreatic intraepithlial neoplasia 0.44
Human CD4+CD103+ cutaneous resident memory T cells are found in the circulation of healthy subjects 0.44
MAIT cell RNA sequencing 0.43
Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs 0.42
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 0.42
SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES 0.41
SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES [RNA-seq] 0.41
RNA-seq data 0.41
Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. 0.41
Discovering human diabetes-risk gene function with genetics and physiological assays 0.41
Domain-focused CRISPR-screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells 0.4
Kidney compartment specific eQTL studies highlight causal genes and pathways for renal disease development 0.4
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.39
Functional Comparison of the HGF/Met and MSP/Ron Systems in a Pancreatic Cancer Model 0.39
Novel kinase fusion oncogenes in post-Chernobyl radiation-induced pediatric thyroid cancers 0.38
Transcriptome profile of ATP7B KO cells and WT cells treated with Copper (Cu) to study Autophagy as a pro-survival mechanism in Wilson disease 0.38
Image based identification and targeting of cancer stem cells in pancreatic adenocarcinoma (PDAC) 0.37
Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles 0.36
Absence of NKG2D ligands defines human leukaemia stem cells and mediates their immune evasion 0.35
Human Adult Sorted Live Cell Erythroblasts RNA-Seq. 0.34
Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [RNA-Seq] 0.33
Defective transcription elongation in a subset of cancers confers immunotherapy resistance (BGI12 RNA-Seq) 0.33
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] 0.33
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation 0.32
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture 0.32
Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production 0.32
Bone marrow derived human B cells [normal proB] 0.32
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 0.32
Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease 0.31
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [TAV] 0.31
Gene expression profile of calcified and normal tricuspid aortic valves by RNA sequencing. 0.31
Dynamic 3D chromosomal landscapes in acute leukemia [RNA-Seq] 0.31
Dynamic 3D chromosomal landscapes in acute leukemia 0.31
Functional Inflammatory Profiles Distinguish Myelin-Reactive T Cells from Patients with Multiple Sclerosis 0.31
Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients 0.3
Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes 0.29
Probing the Global Cellular Responses to Lipotoxicity Caused by Saturated Fatty Acids 0.28
Assessing placental maturity through histological and transcriptomic analyses in idiopathic spontaneous preterm birth 0.28
eRNA: A graphic user interface-based tool for RNA sequencing data analysis [mRNA-Seq] 0.27
eRNA: A graphic user interface-based tool for RNA sequencing data analysis 0.27
Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline 0.27
High-throughput sequencing of the human hepatic progenitor cell niche in PSC and HCV. 0.27
Expression profiling of ILC transitional populations and Aiolos accessability and H3K27ac histone modifications in transfected MNK3 cells 0.26
RNA-Seq from human ILC transitional populations 0.26
Sequencing of matched pair samples (diagnosis and relapse) in human B-cell acute lymphoblastic leukemia cells (ALL) 0.26
Dermal endothelial cells of type 2 diabetic patients 0.25
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV] 0.25
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) 0.25
Recapitulating and Deciphering Tumor-stroma Microenvironment by Using a “LEGO” like 3D printed microfluidic device 0.25
LSD1 pharmacological inhibition in SET-2 containing wild type and mutant LSD1 [RNA-Seq] 0.24
LSD1 pharmacological inhibition in SET-2 containing wild type and mutant LSD1 0.24
RNA-Seq analysis of prostate cancer cell line LNCaP treated with vehicle, androgen, androgen and IMTPPE, androgen and JJ-(+)-450, androgen and JJ-(-)450, androgen and enzalutamide 0.24
Neutrophils RNAseq from Generalised Pustular Psoriasis patients and healthy individuals 0.24
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 0.24
Transcriptional analysis of ZIKV-infected Ifnar-/- and Ifnar+/- placentas and IFN-beta (IFN-b) or IFN-lambda (IFN-l) treated human mid-gestation chorionic villus explants 0.23
Analysis of transcriptional differences after IFN-beta (IFN-b) or IFN-lambda (IFN-l) treated human mid-gestation chorionic villus explants 0.23
Whole blood RNAseq from Generalised Pustular Psoriasis patients and healthy individuals 0.23
Expansion, in vivo-ex vivo cycling and genetic manipulation of primary human hepatocytes 0.23
Parallel T-cell cloning and deep sequencing of the transcripts of human MAIT cells reveal stable oligoclonal TCRβ repertoire 0.21
RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms, and GTPase binding in bipolar disorder 0.21
Evaluation of RNA amplification and RNA-Seq library preparation protocols for spermatozoa RNA profiling 0.21
The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set) 0.2
CD74 role in transcription regulation 0.2
CD74 role in transcription regulation [RNA-seq] 0.2
Single-cell analysis of human kidney organoids 0.2
Immunophenotyping and Transcriptomic Outcomes in PDX-Derived TNBC Tissue 0.2
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis 0.18
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq] 0.18
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing 0.17
An intramolecular salt bridge linking TDP43’s RNA recognition motifs dictates RNA binding, protein stability and TDP43-dependent neurodegeneration 0.17
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells 0.17
Single-Cell reconstruction of differentiation trajectory reveals essential dynamics in human cardiac lineage commitment 0.17
The splicing factor RBM25 controls MYC activity in Acute Myeloid Leukemia 0.16
Temporal comparison of transcriptomic alterations in human, mouse and rat primary B lymphocytes exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) 0.16
Transcriptomics profiles of patient-matched normal kidney and ccRCC pairs 0.16
Antiviral and anti-inflammatory properties of novel anti-HIV candidate ABX464 promotes specifics RNA splicing while preserving cellular RNA integrity. 0.15
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 0.15
ML29755 RNA-seq data 0.15
Measure transcript integrity using RNA-seq data 0.15
RNA-sequencing of mRNAs from control and CAP-D3 deficient Salmonella infected HT-29 cells 0.15
Functional genomic analysis of the haploinsufficient tumor suppressor, CUX1 0.15
Landscape and variation of RNA secondary structure across the human transcriptome 0.14
Transcriptomic profile of intestinal epithelial cells obtained from ileal endoscopic biopsies from newly-diagnosed, pediatric Crohn's disease patients and healthy controls. 0.14
RNASeq of Arg2 gRNA or scrambled gRNA CRISPR'd Tregs 0.14
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 0.14
MicroRNA-28 replacement for non-Hodgkin lymphoma therapy 0.14
Peptidomimetic blockade of MYB in acute myeloid leukemia [RNA-seq] 0.13
Peptidomimetic blockade of MYB in acute myeloid leukemia 0.13
Transcriptomics analysis of gene expression in normal and YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 or SRSF10 deficient human HeLa cells 0.13
Human Treg IFNg/IL-10 subpopulations 0.13
Characterizing the contrasting roles of JMJD3 and UTX histone demethylases in T cell acute lymphoblastic leukemia [GSKJ4_RNA-seq] 0.12
RNA sequencing of human macrophages treated with iron chelator deferiprone (DEF), with and without lipopolysaccharide (LPS) 0.11
Low carbohydrate diet study for non-alcoholic fatty liver disease patients 0.1
Transcriptomic analysis of ERR alpha orphan nuclear receptor 0.09
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 0.09
Gene expression changes due to PARP knockdown in human cells 0.08
Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans. 0.07
The role of the Calcium-Sensing receptor in colorectal cancer 0.07
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 0.07
Gene expression profiling of papillary thyroid cancer from central and invasive regions 0.06
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 0.04
YY1 haploinsufficiency causes an intellectual disability syndrome featuring transcriptional and chromatin dysfunction. 0.04
YY1 haploinsufficiency causes an intellectual disability syndrome featuring transcriptional and chromatin dysfunction [RNA-seq] 0.04
HMGA2 Promotes Long-Term Engraftment and Myelo-Erythroid Differentiation of Human Hematopoietic Stem and Progenitor Cells 0.03
Expression analysis of the TAF1 syndrome 0.03
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 0.03
Low-dose decitabine priming endows CAR T cells with enhanced and persistent anti-tumor potential by epigenetic reprogramming 0.03
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.02
Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology 0.02
A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development (HPC-5F RNAseq) 0.02
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 0.0
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 0.0


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