Gene Query: CEP76

Dataset Description Geneva Score
p53 activity results in DNA replication fork processivity 10.98
EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells 10.15
EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells (RNA-Seq) 10.15
mRNA-seq from Nutlin-3a, doxorubicin, and DMSO treated HCT116 p21-/- cells 8.79
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery (RNA-seq data set) 8.33
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery 8.33
DRB/GRO-Seq -/+ UV 7.75
Next Generation Sequencing Facilitates Quantitative Analysis of SW480 cells and HPSE-knockdown SW480 cells Transcriptomes 6.84
Interaction with WDR5 recruits MYC to a small cohort of genes required for tumor onset and maintenance 5.96
ILF2 Regulates RNA Splicing of DNA Damage Response Genes to Confer Poor Prognosis in 1q21-Amplified Multiple Myeloma 5.23
The conserved transcriptional landscapes in human spermatogenesis 5.08
T47D RNA-seq and ChrRNA-seq data 4.92
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 4.92
Nucleoporin-mediated regulation of cell identity genes 4.78
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 4.34
Genome-wide analysis of STAT3 in diffuse large B-cell lymphoma 4.2
RNAseq of T-ALL upon long non coding rna purturbation 4.14
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients 4.11
Genomic expression analysis of K562 cells expressing shRNA targeting lncRNA-IIRX and control cells 4.09
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes 3.62
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (RNA-seq dataset) 3.55
Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production 3.5
Domain-focused CRISPR-screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells 3.28
Metabolic reprogramming of Kaposi’s sarcoma associated herpes virus infected B-cells in hypoxia 3.26
Transcriptional Modulation of Human Endogenous Retroviruses in Primary CD4+ T Cells Following Vorinostat Treatment 3.21
Effect of BB608 on Gene Expression in HNSCC Cell Line 3.13
HEXIM1 is induced by DHODH inhibition to suppress melanoma 3.12
HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq] 3.12
The BCL6 RD2 domain governs commitment of activated B-cells to form germinal centers 2.99
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] 2.98
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes 2.98
Differential RNA-seq analysis comparing APC-defective and APC-restored SW480 colorectal cancer cells 2.94
The Human Testis Cell Atlas via Single-cell RNA-seq 2.86
PRRX2 and HEY2 double knock-down facilitates ASCL1-induced neuron conversion in human dermal fibroblasts. 2.74
NR4A1 Inhibition Synergizes with Ibrutinib in Killing Mantle Cell Lymphoma Cells 2.65
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 2.6
Non-synchronized cell cycle transcriptomics in U2OS and HeLa cancer cells 2.56
Diverse Compounds from Pleuromutilin Lead to a Thioredoxin Inhibitor and Inducer of Ferroptosis 2.54
Evaluation of RNA amplification and RNA-Seq library preparation protocols for spermatozoa RNA profiling 2.52
RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation [RNA-Seq] 2.51
Aging Human Hematopoietic Stem Cells Manifest Profound Epigenetic Reprogramming of Enhancers That May Predispose to Leukemia (RNA-seq of KLF6 KO) 2.48
Oncogenic Serine-Threonine Kinase Receptor Associated Protein Supports Hepatocellular Carcinoma Cell Growth by Enhancing Wnt/β-catenin Signaling 2.45
Transcriptome sequencing after MAGOHB knockdown in MAGOH-deleted or non-deleted cancer cells 2.43
Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation 2.39
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 2.39
Control of prostate tumour growth by the long non-coding RNA GHSROS 2.38
Transcriptomic profiling of O-GlcNAcylated mRNA-protein complexes by using OG-CLAP in HeLa cells. 2.32
RNA seq data of Hep3B-control, Hep3B-sertraline, Hep3B-XL413, Hep3B-XL413-sertraline, Huh7-control, Huh7-sertraline, Huh7-XL413, Huh7-XL413-sertraline cells 2.31
RNA-seq analysis of differentiating human erythroblasts 2.31
Hijacking of stress response machinery by oncogenes in acute leukaemia 2.3
Hijacking of stress response machinery by oncogenes in acute leukaemia [RNA-seq] 2.3
Characterization of human CDK12 and CDK13 in the regulation of RNA processing 2.29
Transcriptional dependencies in diffuse intrinsic pontine glioma 2.29
Brain organoids reproducibly generate the cellular diversity of the human cerebral cortex 2.28
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells 2.27
HNF1A deficiency impairs β-cell fate, granule maturation and function 2.24
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer 2.17
Characterizing the contrasting roles of JMJD3 and UTX histone demethylases in T cell acute lymphoblastic leukemia [short_hairpins_RNA-seq] 2.17
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and PVT1 Knockdown by CRISPRi in MDA-MB-231 human breast cancer cell line 2.16
Promoter of lncRNA gene *PVT1* is a tumor suppressor DNA element 2.16
Triplet nucleotide repeat-based siRNAs are highly toxic to cancer cells 2.13
Total RNA-seq in ALL-SIL upon JQ1 inhibition 2.09
Loss of histone macroH2A1 in hepatocellular carcinoma cells promotes paracrine-mediated chemoresistance and CD4+CD25+ T regulatory cells activation 2.01
RNA-seq of YB5 and MCF7 treated with different doses of decitabine 2.0
Global Regulation of Alternative Internal Exon Usage by mRNA 3' End Formation Factors [RNA-Seq] 1.99
Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors 1.99
Genome-wide transcriptome analysis of NIPBL iPSC and commited cardiomyoctes 1.99
ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2 1.99
ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2 [RNA-Seq] 1.99
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma shRNA Clone TRCN0000005418 targeting RIOK3 with puromycin selection RNAseq 1.99
RNA m5C Methylation in breast cancer using MeRIP-Seq 1.96
Real-time observation of light-controlled transcription in living cells 1.94
The Jumonji-domain histone demethylase inhibitor JIB-04 deregulates oncogenic programs and increases DNA damage in Ewing Sarcoma, resulting in impaired cell proliferation and survival, and reduced tumor growth 1.94
Human SETMAR is a DNA sequence-specific histone-methylase with a broad effect on the transcriptome 1.91
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 1.88
The Notch driven long non-coding RNA repertoire in T-cell acute lymphoblastic leukemia 1.88
Isolation and Transcriptome Analyses of Human Erythroid Progenitors: BFU-E and CFU-E 1.83
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 1.83
Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes—GMUCT 2.0 1.81
The long non-coding RNA MALAT1 contributes to the pathogenesis of multiple sclerosis through alternative splicing and backsplicing regulation 1.8
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 1.76
Tristetraprolin disables prostate cancer maintenance by impairing proliferation and metabolic function 1.76
RNA sequencing of MDA-MB231 and U2OS cancer cell lines exposed to the alkylating agent methyl methanesufonate (MMS) and classical chemotherapeutics  1.75
Transcriptome analysis of total RNA in human osteosarcoma cell line U2OS before and after inhibition of zinc finger protein ZNF768 1.75
Next Generation Sequencing Facilitates Quantitative Analysis of HIV-1 Latency in Central Memory T Cells 1.75
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 1.73
LIN28A Over-expression RNAseq 1.73
CD95L derived si- and shRNAs and the CD95L mRNA kill cancer cells through an RNAi mechanism by targeting survival genes [siL3.RNAseq.lg] 1.73
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma non-targeting shRNA negative control (SHC002V) with puromycin selection RNAseq 1.73
Human neutrophil genome during PMA- and E. coli encounter-induced activation 1.7
RNA-seq profiling of the human neutrophil genome during PMA- and E. coli encounter-induced activation 1.7
24hr CA treatment vs. DMSO in HCT116 cells (from 'Identification of CDK8 and CDK19 substrates in human cells using cortistatin A and quantitative phosphoproteomics') 1.69
Human Cactin interacts with DHX8 and SRRM2 to assure efficient pre-mRNA splicing and sister chromatid cohesion. 1.69
shRNA-mediated knockdown of ETV4 and MED25 in the prostate cell line PC3 reveals set of genes potentially coregulated by MED25 and ETV4 1.68
Genome-wide occupancy of FLAG-MED25 and ETV4 and expression profiling of shRNA-mediated knockdown of ETV4 and MED25 in the prostate cell line PC3 1.68
Sequence dependency and regulatory function of dimeric NOTCH1/RBPJ complexes on coding and non-coding transcription in T-lymphoblastic leukemia 1.68
IGF2BP3 controls cancer cell invasiveness by modulation RISC function 1.67
Modulation of SF3B1 causes global intron retention and downregulation of the B-cell receptor pathway in chronic lymphocytic leukemia 1.67
A MYC/GCN2/eIF2alpha negative feedback loop limits protein synthesis to prevent MYC-dependent apoptosis in colorectal cancer 1.66
A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters 1.63
JMJD1C is required for the survival of acute myeloid leukemia by functioning as a co-activator for key transcription factors 1.62
RNA expression analysis upon JMJD1C depletion 1.62
MYC interacts with the G9a histone methyltransferase to drive transcriptional repression and tumorigenesis 1.6
miRNA-1343 attenuates pathways of fibrosis by targeting the TGF-beta receptors [RNA-seq] 1.6
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells (RNA-Seq) 1.57
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells 1.57
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq] 1.57
Developmental stage specific chromosome architecture in human erythroid cells 1.56
Developmental stage specific chromosome architecture in human erythroid cells (RNA-seq) 1.56
The effect of doxycycline-induced expression of host-cell-factor 2 (HCF-2) proteins on the global gene expression in HEK-293 cells 1.56
Identification of diverse target RNAs that are functionally regulated by human Pumilio proteins 1.55
RNA-seq analysis of CRISPR/Cas9 generated human BMPR2 deficient endothelial cell lines harboring mutations characteristic for hereditary pulmonary hypertension (HPAH) 1.55
C9orf72 Intermediate Repeats are Associated with Corticobasal Degeneration, Increased C9orf72 Expression and Disruption of Autophagy 1.54
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits [mRNA-Seq] 1.53
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits 1.53
Transcription control by the ENL YEATS domain in acute leukemia [RNA-seq] 1.5
Transcription control by the ENL YEATS domain in acute leukemia 1.5
Whole transcriptome RNA sequencing of human cells after HCV infection (ML-1 thyroid cell line, primary thyrocytes and Huh7.5 hepatocyte cell line) 1.5
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming 1.49
Distinct gene expression profile of Huh7 cell lines stably overexpressing CRABP1 or 2 1.48
MLL-AF4 Spreading Identifies Binding Sites that Are Distinct from Super-Enhancers and that Govern Sensitivity to DOT1L Inhibition in Leukemia. 1.48
Dual inhibition of HDMX and HDM2 as a Therapeutic Strategy in Leukemia 1.47
Activation of a SOX2-dependent transcriptional regulatory circuit drives glioblastoma. 1.44
hTERT promotes cell adhesion and migration independent of telomerase activity 1.43
The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin Remodeling Complexes 1.43
Analysis and expansion of the eosinophilic esophagitis transcriptome by RNA sequencing 1.43
RNA-Seq analysis of cSCC cells followed by siRNA-induced gene knockdown of AIM2. 1.42
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 1.41
A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks 1.41
Identification of a dynamic core transcriptional network in t(8;21) AML regulating differentiation block and self-renewal 1.41
Identification of a dynamic core transcriptional network in t(8;21) AML regulating differentiation block and self-renewal [RNA-Seq] 1.41
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues 1.4
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues (sequencing) 1.4
Tracking of dCas9-methyltransferase footprints 1.39
HDAC and NFκB antagonists synergistically inhibit growth and metastatic dissemination of MYC-driven medulloblastoma 1.38
Differentially expressed genes post knock down of lincDUSP26 1.38
Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer 1.37
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition 1.34
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [RNA-Seq] 1.34
Genome-wide CRISPR-Cas9 screen identifies druggable synthetic lethality between LSD1 and MTORC1 in MLL-translocated AML 1.34
The pause-initiation limit restricts transcription activation in human cells 1.33
ZMYND8 reads the dual histone mark H3K4me1-H3K14ac to antagonize the expression of metastasis-linked genes 1.31
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells 1.3
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] 1.3
Cellular gene expression during Hepatitis C Virus replication revealed by Ribosome profiling 1.29
Disruption of the exocyst induces podocyte loss and dysfunction 1.28
The cohesin complex prevents Myc-induced replication stress 1.27
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice 1.25
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] 1.25
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 1.25
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo 1.25
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] 1.25
Transcriptome-wide analysis of IL2RA enhancer activation by CRISPRa 1.24
A Novel PI3K Regulator, ARID4B, Presents Synthetic Essentiality in PTEN-deficient Prostate Cancer 1.23
A Novel PI3K Regulator, ARID4B, Presents Synthetic Essentiality in PTEN-deficient Prostate Cancer [RNA-seq] 1.23
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HET] 1.21
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 1.19
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] 1.19
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation 1.19
MPTAC determines APP fragmentation via sensing sulfur amino acid catabolism 1.18
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 1.15
RIG-I and MDA5 fRIP during KSHV lytic reactivation 1.15
Accurate annotation of human protein-coding small open reading frames 1.14
Transcriptional responses of human insulinoma cells to acute cytokine exposure 1.14
Nuclear import of the DSCAM-cytoplasmic domain drives signaling capable of inhibiting synapse formation 1.14
Oncogenic MYC induces a dependency on the spliceosome in human cancer 1.13
A SRp55-regulated alternative splicing network controls pancreatic beta cell survival and function 1.12
Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient 1.12
SLAM-seq for K562 endogenous mRNA decay 1.11
Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference 1.1
Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference [RNA-Seq] 1.1
R430: A potent inbibitor of DNA and RNA viruses 1.09
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma 1.08
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma (RNA-Seq) 1.08
Novel mutations segregating with Complete Androgen Insensitivity Syndrome and their molecular characteristics. 1.07
Total RNA-seq in ALL-SIL upon TLX1 knockdown 1.07
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 1.06
RNA-sequencing of the GSI treatment of the CUTLL1 cell line 1.06
Neonatal and adult human testis defined at the single-cell level 1.05
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 1.05
Proteotranscriptomic profiling of potential E6AP targets in prostate cancer cells 1.05
Probing the Global Cellular Responses to Lipotoxicity Caused by Saturated Fatty Acids 1.04
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer 1.04
Characterizing smoking-induced transcriptional heterogeneity in the human bronchial epithelium at single-cell resolution 1.03
Global transcriptional changes in the JJN3 myeloma cell line that occur as a result of treatment with 2 pyrrolobenzodiazepine (PBD) monomers 1.02
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 1.02
Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration 1.02
Genome-wide Gene Expression Profiling in DLBCL Cell Lines Treated with CUDC-907 1.02
IMP3 regulated gene expression in breast cancer cells 1.01
Long Non-coding RNA PICSAR Promotes Growth of Cutaneous Squamous Cell Carcinoma by Regulating ERK1/2 Activity 1.01
PRDM1 inhibits proliferation of human colon cancer organoids 0.99
Global transcriptome analysis of HAP1 cells 0.99
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 0.98
The LINC01138 Drives Malignancies via Activating Arginine Methyltransferase 5 in Hepatocellular Carcinoma 0.97
Transcriptomic analysis of cultured corneal endothelial cells as a validation for their use in cell-replacement therapy 0.96
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [RNA-Seq] 0.96
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites 0.96
Nickel exposure induces persistent mesenchymal phenotype in human lung epithelial cells through epigenetic activation of ZEB1 0.96
ARID1A regulates condensin II distribution and chromosomal partition [RNA-seq] 0.94
ARID1A regulates condensin II distribution and chromosomal partition 0.94
Divergent effects of eRF3 and Upf1 on the expression of uORF carrying mRNAs and ribosome protein genes 0.94
Vitamin d receptor-mediated stromal reprogramming suppresses pancreatitis and enhances pancreatic cancer therapy 0.94
Transcriptome-analysis of patient-derived normal and ulcerative colitis intestinal epithelial organoids 0.94
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression 0.94
Comprehensive comparative analysis of 5’ end RNA sequencing methods 0.93
The RNA-binding profile of Acinus, a peripheral component of the Exon junction complex, reveals its role in splicing regulation 0.93
Transcription-dependent control of stem cell self-renewal and differentiation by the splicing factor U2AF1 0.93
Epigenome-wide Effects of Vitamin-D on Bronchial Epithelial Cells using ATAC-Seq and RNA-seq 0.93
Bromodomain inhibition of the transcriptional coactivators CBP/EP300 as a therapeutic strategy to target the IRF4 network in multiple myeloma 0.92
Bromodomain inhibition of the transcriptional coactivators CBP/EP300 as a therapeutic strategy to target the IRF4 network in multiple myeloma (RNA-Seq) 0.92
RNA-seq analysis to identify the genes regulated by p53-SET interplay 0.92
RNAseq of PRMT4KD in human cord blood derived CD34+ cells 0.92
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 0.92
Subcellular RNA fractions of HSV-1 infected primary human fibroblasts 0.92
RNA-seq data corresponding to: AZD4573 is a highly selective CDK9 inhibitor that suppresses Mcl-1 and induces apoptosis in hematological cancer cells 0.91
Uridylation by TUT4 and TUT7 marks mRNA for degradation 0.9
In vitro modeling of human germ cell development using pluripotent stem cells 0.9
Valproic acid attenuates hyperglycemia induced complement and coagulation cascade gene expression 0.9
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins 0.89
The impact of pro-inflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes 0.89
Genomic profiling of human spermatogonial stem cells [BulkRNA-Seq] 0.89
Transcriptomics analysis of gene expression in multiple human and mouse cells and tissues 0.88
m6A-seq data analysis of control and PCIF1 knockdown transcriptome 0.88
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling 0.88
Effect of selective glucocorticoid receptor modulation (SGRM) on gene expression in human prostate cancer cell lines 0.87
UV-Irradiation Induces a Noncoding RNA that Functionally Opposes the Protein Encoded by the Same Gene 0.86
Insulin receptor associates with promoters genome-wide and regulates gene expression [RNA-seq] 0.86
Capturing the Interactome of Newly Transcribed RNA 0.86
Capturing the Interactome of Newly Transcribed RNA (RICK) 0.86
JunB control of keratinocyte-mediated inflammation [RNA-seq] 0.86
RNA-Seq and ChIP-Seq reveals SQSTM1/p62 as a key mediator of JunB suppression of NF-kB-dependent inflammation 0.86
Genome-wide expression from the esophageal biopsies of subjects with and without eosinophilic esophagitis 0.86
STVI-120 Induction of differentiation in human epidermal stem cells followed by differential splicing analysis 0.85
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes 0.85
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq) 0.85
Knockdown of ADNP in HCT116 colon cancer cells 0.85
RNA polymerase in pre-B-ALL cell lines 0.85
Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells 0.84
LncRNA-GAS5 negative regulation of YAP-target genes expression 0.84
Gene expression profile in breast cancer cells 0.83
Genome-wide profile of cJun and p27 and gene expression profile in breast cancer cells 0.83
RNA-seq analysis of control and ZC3H18-depleted ovarian cancer cells 0.83
IL-21/type I interferon interplay regulates neutrophil-dependent innate immune responses to Staphylococcus aureus 0.83
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 0.82
THZ1 targeting CDK7 suppresses STAT transcriptional activity and sensitizes T-cell lymphomas to BCL2 inhibitors 0.82
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells 0.82
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells [GRO-seq] 0.82
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development 0.81
Biochemical fractionation of HEK293 nuclei and RNA-seq of chromatin-associated and soluble-nuclear RNA 0.81
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq] 0.81
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) 0.81
Potent and targeted activation of HIV-1 using the CRISPR/Cas9 activator Complex 0.81
Spliceosomal disruption of the non-canonical BAF complex in cancer 0.8
C/EBPα overexpression overrides epigenetic reprogramming by RUNX1-ETO and RUNX1-EVI1 [RNA-seq] 0.8
C/EBPα overexpression overrides epigenetic reprogramming by RUNX1-ETO and RUNX1-EVI1 0.8
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase 0.79
Transcriptomic hallmarks of tumor plasticity and stromal interactions in brain metastasis 0.79
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.78
Homolog-selective degradation as a strategy to probe the function of CDK6 in AML 0.78
Long non-coding RNA RP11-19E11.1 is an E2F1 target required for tumor cell proliferation and survival in basal breast cancer 0.77
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes 0.76
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells 0.75
Transcriptomic analysis to functionally map the intrinsically disordered domain of EWS/FLI [Experiment 1] 0.75
Studying the selectivity of a targeted small molecule degrading a hypoxia-associated non-coding RNA 0.74
CD95/Fas ligand mRNA is toxic to cells 0.74
Cell responses to dysregulated VZV-induced cell-cell fusion 0.74
Gene expression profiling by RNA-seq of SW480 TGM2 knockdown cells 0.73
Profiles of ribosome-associated mRNAs regulated by expression of wild-type (WT) or R534H variant of DDX3 with or without Sodium Arsenite treatment 0.72
Total RNA profiles associated with DDX3 wild-type (WT) or R534H variant expression with or without sodium arsenite treatment [RNA-seq] 0.72
Melanoma therapeutic strategies that select against resistance by exploiting MYC-driven evolutionary convergence 0.72
The role of the Calcium-Sensing receptor in colorectal cancer 0.72
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 0.71
Differential mRNA expression upon 9p21 deletion in HEK TE single-cell derived clones 0.71
Loss of 9p21 regulatory hub promotes kidney cancer progression by upregulating HOXB13 0.71
Effect of drugs on transcriptomic profiles 0.7
Dissection of estrogen receptor alpha signaling pathways in osteoblasts using RNA-sequencing 0.69
Functional significance of the HIV-1 Tat signature amino acid residues 0.69
A non-catalytic function of carbonic anhydrase IX contributes to the glycolytic phenotype and pH regulation in human breast cancer cells 0.68
Smad5 acts as an intracellular pH messenger and maintains bioenergetic homoeostasis 0.68
RNA-Seq Samples of siTFE3 in 8988T PDA Cell Line to Investigate Transcriptional Control of the Autophagy-Lysosome System 0.67
Triple vectors expand AAV transfer capacity in the retina 0.66
Transcriptional profiling of microglia; current state of the art and future perspectives 0.66
Mapping interactions for the TNIP2 hub protein 0.65
Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on HepG2) 0.65
The hepatitis C viral protein NS5A stabilizes growth-regulatory human transcripts 0.65
TT-Seq captures the human transient transcriptome 0.64
RNA-seq of resting and activated CD4+ T cells +-JQ1 0.64
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing 0.64
RNA-Sequencing experiment for effects of PKF115-584 treatment on four T-ALL cell lines (RPMI8402, HPB-ALL, Jurkat, CCRF-CEM). 0.64
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 0.63
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator [RNA-seq] 0.63
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator 0.63
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 0.62
Generating Patterned Kidney Organoids for Studying Development and Diseases 0.62
Transcriptomic profiling of cleavage-resistant RIPK1 induced autoinflammation syndrome patients 0.62
A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance 0.61
Extracellular matrix hydrogel derived from decellularized tissues enables endoderm organoids culture 0.61
A Stable Transcription Factor Complex Nucleated by Dimeric AML1-ETO Controls Leukaemogenesis 0.61
GREB1 amplifies androgen receptor output in prostate cancer and contributes to antiandrogen resistance 0.61
SAM68 is required for regulation of Pumilio by the NORAD long noncoding RNA 0.6
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) 0.6
4sUDRB-seq: measuring transcription elongation and initiation genomewide 0.6
Identification of Differentially Expressed Splice Variants by the Proteogenomic Pipeline Splicify 0.59
Transcriptional changes in lymphoma cells induced by LSD1 depletion 0.59
Histone demethylase LSD1 is required for germinal center formation and BCL6 driven lymphomagenesis 0.59
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.59
Chromatin remodeling mediated by ARID1A is indispensable for normal hematopoiesis in mice (human RNA-Seq) 0.59
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates 0.58
RNA sequencing of isogenic BRCA2 haploinsufficient vs. wild-type T-ALL cells 0.58
Gene expression changes due to PARP knockdown in human cells 0.58
Epigenetic reprogramming of melanoma cells by vitamin C treatment 0.57
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer 0.57
Identification of long noncoding RNAs regulated by p53 0.57
Epigenetic changes induced by Bacteroides fragilis toxin (BFT) 0.56
Epigenetic changes induced by Bacteroides fragilis toxin (BFT) [RNA-seq] 0.56
m6A-RNA mapping, SND1-RNA binding profile mapping and SND1-depletion in KSHV-infected B-lymphocytes 0.56
JMJD3 facilitates C/EBPβ-centered transcriptional program to exert oncorepressor activity in AML 0.56
Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq 0.56
Cellular recruitment by podocyte-derived pro-migratory factors in assembly of the human renal filter 0.55
Early transcriptome profiling of microRNA-mediated neuronal reprogramming [RNA-seq timecourse] 0.54
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 0.54
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 0.54
Diffuse Large B Cell Lymphoma cell line with Acquired Resistance to PI3Kδ Inhibitor Idelalisib 0.54
CRISPR/Cas9-mediated ASXL1 mutation in U937 cells perturbs myeloid differentiation 0.53
Transcriptome-wide modulation of splicing by the exon junction complex 0.53
Effect of PRDM11 depletion in U2932 cells 0.53
Identification of miRNA signatures during the differentiation of hESCs into retinal pigment epithelial cells 0.53
Transcriptome-wide analysis links the short-term expression of the b isoforms of T-cell intracellular antigens to protective proteostasis-mediated survival and quiescence 0.53
A comprehensive single cell transcriptional landscape of human hematopoietic progenitors 0.52
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq SS] 0.52
Human Adult Sorted Live Cell Erythroblasts RNA-Seq. 0.52
Transcriptional regulation in pluripotent stem cells by Methyl CpG binding protein 2 (MeCP2) 0.52
Global unleashing of transcription elongation waves in response to genotoxic stress restricts somatic mutation rate 0.51
RNA-seq expression data from FL-HSPCs after HOXA7 knockdown 0.51
RNA-sequencing analysis examining how the Vibrio cholerae MARTX toxin and its inidividual effector domains modulate the transcriptome of human intestinal epithelial cells. 0.51
Image based identification and targeting of cancer stem cells in pancreatic adenocarcinoma (PDAC) 0.51
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.5
Genome-wide mapping of TEL-AML1 targets in acute leukemia 0.49
Dynamic gene expression in T-ALL following treatment and release of gamma-secretase inhibition [GRO-Seq] 0.48
Proteolytic cleavage by taspase1 and the regulation of the stability of MLL1 0.48
Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline 0.48
Genome-Wide Transcriptional Effects of the Anti-Cancer Agent Camptothecin 0.48
MYCL and EP400 are required for Max and MCPyV mediated gene activation 0.48
Integrin αvβ3 acting as membrane receptor for thyroid hormones mediates angiogenesis in malignant T cells 0.47
Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [TMCC2] 0.46
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 0.45
Regulators of cellular heterogeneity in basal-like breast cancer influence symmetric versus asymmetric division rates (shRNA targeting) 0.45
Poly(ADP-ribose) polymerase 1 is necessary for coactivating hypoxia-inducible factor-1-dependent gene expression by Epstein-Barr virus latent membrane protein 1 0.44
ZRANB2 and SYF2 mediated splicing programs converging on ECT2 are involved in breast cancer cell resistance to doxorubicin 0.44
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner [Huh-7] 0.43
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner 0.43
GRHL2 is a key lineage determining factor which collaborates with FOXA1 to establish a targetable collateral pathway in the setting of endocrine therapy-resistant breast cancer (RNA-Seq data set 1) 0.43
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 0.43
SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer 0.43
KSDM1b Role in Ewing Sarcoma 0.42
The immediate impact of exoribonucleolysis on nuclear RNA processing, turnover and transcriptional control revealed by rapid depletion of DIS3, EXOSC10 or XRN2 from human cells 0.42
High Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML 0.42
Effect on small molecule RBPJ inhibitor (RIN1) on gene expression in Jurkat cells compared to gamma secretase inhibition and siRNA knockdown of RBPJ 0.42
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [RNA-Seq_Hs] 0.42
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis 0.42
Transcriptome analysis of AGS cells infected with Helicobacter pylori P12 0.41
The identification of RBM47 binding sites and RBM47-dependent alternative splicing events in brain metastatic breast cancer cells 0.41
Identification of alternatively spliced transcripts in brain metastatic derivatives of MDA-MB-231 breast cancer cells in response to RBM47 expression 0.41
ICE1 promotes the link between splicing and nonsense-mediated mRNA decay 0.4
Hypoxic transcriptome of SQ20B human head and neck cancer cells 0.4
Transcriptome of EBV-infected gastric cancer cell lines 0.39
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression 0.39
RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining 0.39
Noncoding regions are the main source of targetable tumor-specific antigens 0.38
Amiloride, an old diuretic drug, is a potential therapeutic agent for multiple myeloma 0.38
Gene expression profiles of tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.37
Splicing towards noncoding isoforms in colorectal carcinoma is associated with tumor hypoxia and the DNA damage response 0.36
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 0.36
TOP2B disturbed the quality of human oocytes with advanced maternal age 0.36
Genome-wide analysis of the Integrator complex 0.35
Genome-wide analysis of the Integrator complex (HTS) 0.35
RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood 0.35
RNA-sequencing of bulk CD19+ Thymic B cells from young (3 month - 4 year) and old (42 - 61 years) humans 0.35
RNA-sequencing of bulk CD19+ Thymic B cells from mice and humans 0.35
Transcriptome profile of HepG2-expressing ATP7B-H1069Q (liver hepatocellular cells) exposed to JNK or p38 Inhibitor 0.34
Transcriptome splicing analysis in K562 cells expressing rare and private spliceosomal mutations 0.34
Oncogenic Antisense LncRNA P14AS Regulates Expression of ANRIL through AUF1 Binding 0.34
Effect of PDZ domain binding Kinase inhibition using TOPK-32 (called PBKi) on C4-2 cell transcriptome 0.34
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 0.32
RNA-seq analysis of control and Myc-induced U2OS cells 0.32
PolyA+ RNA-seq in ALL-SIL upon TLX1 knockdown 0.31
RNA sequencing quantitative analysis of RNA editing levels in ADAR1, ADAR2, AIMP2 overexpression and wild type HEK293 cells 0.3
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 0.3
Whole transcriptome profile of citrulline-specific B cells from patients with rheumatoid arthritis 0.3
Gene expression profiles of PD1-high, PD1-intermediate, and PD1-negative tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.3
Widespread backtracking by RNA pol II is a major effector of gene activation, 5’ pause release, termination and transcription elongation rate 0.29
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] 0.29
RNA-seq data of small cell carcinoma of the bladder (SCCB) /urothelial carcinoma (Non-SCCB) clinical samples, and bladder-PARCB cell lines 0.28
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells 0.28
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures 0.27
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures [RNA-Seq] 0.27
Gene expression in TAL1-driven T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment 0.27
T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment 0.27
Treatment of prostate cancer cells with S-adenosylmethionine leads to genomewide alterations of transcription profiles 0.26
Activation of the p53 transcriptional program sensitizes cancer cells to Cdk7 inhibitors 0.26
Myc activation coordinates gene transcription and protein translation responses 0.26
Characterizing the contrasting roles of JMJD3 and UTX histone demethylases in T cell acute lymphoblastic leukemia [GSKJ4_RNA-seq] 0.26
6mer seed toxicity in tumour suppressive microRNAs 0.26
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 0.26
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 0.26
Expression data for HT29 cells treated with 5-aza-deoxy-cytidine [RNA-Seq] 0.26
Expression data for HT29 cells treated with 5-aza-deoxy-cytidine 0.26
Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes 0.25
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid 0.25
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors 0.25
Landscape and variation of RNA secondary structure across the human transcriptome 0.24
mRNA profiles of JMJD3 overexpression- and JMJD3 knockout- HL-60 cells 0.24
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 0.24
Pseudouridylation of tRNA-derived fragments steers translation control in stem cells [Polysome-Seq] 0.24
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer 0.24
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer [RNA-seq] 0.24
Inactivation of CFTR by CRISPR/Cas9 alters transcriptional regulation of inflammatory pathways and other networks 0.23
TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation 0.23
RNA-seq of HEK293T cells overexpressing TET1-FL or TET1-ALT 0.23
RelA mutants 'reconstituted' and cell cycle synchronized HCT116 Colorectal Cancer Cells 0.23
A runaway PRH/HHEX-Notch3 feedback loop drives cholangiocarcinoma (RNA-Seq) 0.22
Single-Cell reconstruction of differentiation trajectory reveals essential dynamics in human cardiac lineage commitment 0.21
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HEK293 cells treated with or without TNF-alpha 0.21
A Non-Canonical Nuclear Activity Triggered by Small RNAs and Argonaute Proteins in Human Cells 0.21
RNA G-quadruplexes mark repressive upstream open reading frames in human mRNAs 0.21
Isogenic patient-derived human iPSCs, wild-type or heterozygous for PIK3CA-E418K 0.2
RNA-seq analysis in knockdown Jurkat samples for each factor of TAL1 complex 0.2
Oncogenic roles of ARID5B in T-ALL 0.2
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 0.2
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation II 0.2
The LIN28B/let-7 axis is a novel therapeutic pathway in Multiple Myeloma 0.2
Increased Serine and One Carbon Pathway Metabolism by PKCl/i Deficiency Promotes Neuroendocrine Prostate Cancer 0.19
Increased Serine and One Carbon Pathway Metabolism by PKCl/i Deficiency Promotes Neuroendocrine Prostate Cancer [RNA-seq] 0.19
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 2] 0.19
Regulation of stem cell property and drug resistance of cancer cells by targeting transcriptional machinery via inhibition of neddylation 0.19
Cooperation of Nutlin-3a and a Wip1 inhibitor to induce p53 activity 0.19
Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells 0.19
Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells [RNA-Seq] 0.19
Identification of a core p53 transcriptional program with highly fractionated tumor suppressive activity 0.19
GRO-seq from HCT116, MCF7 and SJSA cell lines treated with DMSO and Nutlin 0.19
Transcriptome-wide response to synthetic chromatin protein PcTF 0.19
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 0.19
Disease-associated mutation in SRSF2 misregulates splicing by altering RNA binding affinities 0.18
Rate of elongation by RNA polymerase II is influenced by specific gene features and histone modifications 0.18
Integrative classification of human coding and non-coding genes based on RNA metabolism profiles 0.18
O-glcnAc reprograms cellular energetics 0.18
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome 0.18
Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells 0.18
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 0.18
The transcriptome and chromatin accessbility landscape of mammalian germline 0.17
Hepatitis C virus functionally sequesters miR-122 0.17
Hepatitis C virus functionally sequesters miR-122 [RNA-Seq] 0.17
Recapitulating and Deciphering Tumor-stroma Microenvironment by Using a “LEGO” like 3D printed microfluidic device 0.16
Human Cord Blood Sorted Live Cell Erythroblasts RNA-Seq 0.16
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies [RNA-seq data set 2] 0.16
Maternal-biased H3K27me3 correlates with paternal-specific gene expression in the human morula 0.16
RNA seq analysis of human Fetal and adult derived Enterospheres 0.16
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo 0.14
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [RNA-seq] 0.14
Identification of a LIF-responsive replication-competent human β cell 0.13
GIST cell cycle dysregulation is required for progression to high-risk disease but not for resistance to kinase inhibitors 0.12
Primate-specific gene TMEM14B promotes cortical expansion and folding 0.12
Single-Cell RNA Sequencing Reveals Metallothionein Heterogeneity during hESC Differentiation to Definitive Endoderm [RNA-Seq] 0.11
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 0.11
Transcriptomics analysis of gene expression in normal and YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 or SRSF10 deficient human HeLa cells 0.11
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 0.1
Identification of a unique gene expression signature in mercury and 2,3,7,8-tetrachlorodibenzo-p-dioxin co-exposed cells 0.09
An intramolecular salt bridge linking TDP43’s RNA recognition motifs dictates RNA binding, protein stability and TDP43-dependent neurodegeneration 0.09
Radiomic and gEnomic approaches for the enhanced DIagnosis of REnal Cancer (REDIRECt): A translational pilot study 0.08
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 0.07
RUVBL1/RUVBL2 ATPase Activity Drives PAQosome Maturation, DNA Replication and Radioresistance in Lung Cancer 0.07
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 0.07
Regulation of the glucocorticoid receptor via a BET-dependent enhancer drives antiandrogen resistance in prostate cancer 0.06
Next generation sequencing of the transcriptome in MCF-7 cells with/without SRA knockdown 0.06
Combined MEKi (GDC-0973) and WNT (G007-LK) treatment in APC and KRAS mutant HCT-15 cell line 0.06
RNA sequencing of prostate cancer and normal tissue from African Americans and European Americans 0.06
RNA-seq of cancer cell lines treated with T-025 0.06
Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs 0.05
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 0.05
Aging Human Hematopoietic Stem Cells Manifest Profound Epigenetic Reprogramming of Enhancers That May Predispose to Leukemia (RNA-Seq of HSCe) 0.05
CD133hi, Notchhi, DP (double positive) and DN (double negative) in GBML8 and GBML20, both patient-derived glioblastoma tumorsphere cultures 0.05
An Argonaute phosphorylation cycle promotes microRNA-mediated silencing [whole transcriptome RNA-seq] 0.05
A single-cell transcriptome atlas of the human pancreas 0.04
Recurrent alterations of TNFAIP3 (A20) in T-cell large granular lymphocytic leukemia 0.04
Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA] 0.03
Human Tfh cell RNA bulk sequencing 0.03
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture 0.03
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation 0.03
Influenza Vaccination Primes Human Myeloid Cell Cytokine Secretion and Natural Killer Cell Function 0.02
Transcriptome analysis of SKI knock-out in HL60 cells 0.02
Combined cistrome and transcriptome analysis of SKI in AML cells identifies SKI as a co-repressor for RUNX1 0.02
Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles 0.01
HSB-2 cells stably expressing LDB1 or mutant LDB1 proteins 0.01
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle [RNA-seq] 0.01
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle 0.01
Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer 0.01
Transcriptomic analysis of LSD1 0.0
Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing 0.0
Transcriptional landscape changes during human embryonic stem cell derivation 0.0
Sequencing of matched pair samples (diagnosis and relapse) in human B-cell acute lymphoblastic leukemia cells (ALL) 0.0


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