Gene Query: CHN2

Dataset Description Geneva Score
Comprehensive analysis of microRNA expression in regionalized human neural progenitor cells reveals microRNA-10 as a caudalizing factor 59.94
mRNA differential expression in LNCaP cells expressing the wild-type androgen receptor (AR-WT) or the ligand-independent AR-V7 splice variant 43.49
Differential expression in LNCaP cells expressing the wild-type androgen receptor (AR-WT) or the ligand-independent AR-V7 splice variant 43.49
Treatment Paradigms for Retinal and Macular Diseases Using 3-D Retina Cultures Derived From Human Reporter Pluripotent Stem Cell Lines 43.12
XPO1 inhibition antagonizes MCL via nuclear retention of IkB: Selinexor demonstrates antitumor activities in both ibr-sensitive and ibr-resistant tumor cells 35.71
HDAC and NFκB antagonists synergistically inhibit growth and metastatic dissemination of MYC-driven medulloblastoma 35.1
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 30.75
Generation, transcriptome profiling, and functional validation of cone-enriched human retinal organoids 27.02
Next Generation Sequencing Facilitates Quantitative Analysis of Retinoblastoma Transcriptomes 25.53
Exploiting drug addiction mechanisms to select against MAPKi resistant melanoma 22.16
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [ZNF787] 21.48
RNA-Seq study of Cell lines rendered resistant to idelalisib and ibrutinib 20.58
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data 17.76
RNA-sequencing of human liver tissue 15.39
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury [human iPS] 14.13
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury 14.13
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 13.78
Anaylsis of the effect of down-regulation of the EWS-FLI1 fusion protein in Ewing Sarcoma cells by RNA-seq. 13.19
Genome-wide analysis of STAT3 in diffuse large B-cell lymphoma 13.01
Insulin receptor associates with promoters genome-wide and regulates gene expression [RNA-seq] 12.7
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq] 12.4
Transcriptomic analysis to functionally map the intrinsically disordered domain of EWS/FLI [Experiment 1] 11.76
Expression changes in melanoma cell lines under BRAFi treatment timepoints [RNA-Seq.CellLine.batch3] 11.14
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [RNA-seq] 10.95
Treatment of multiple myeloma cells with EZH2 small molecule inhibitor 10.77
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (wtRNA-Seq) 10.68
Depicting early human development and germ cell origin with porcine embryos 10.27
The Human Testis Cell Atlas via Single-cell RNA-seq (Healthy men scRNA-seq data set) 10.12
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain 10.05
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain [RNA-Seq] 10.05
Ectoderm specification of H1 human embryonic stem cells 9.75
RNAseq of PRMT4KD in human cord blood derived CD34+ cells 9.63
Transcriptome analysis of genetically matched human induced pluripotent stem cells disomic or trisomic for chromosome 21 9.54
JAK dependent survival of ALK- ALCL 9.11
RNA-Seq Analysis in purified iPS cell-derived neuronal samples 8.8
Expression levels of genes of NKG2C+ NK cells after in vitro treatment 8.68
Stranded RNA-seq were performed on total RNA following ribosomal RNAs depletion (Ribo-zero removal kit, illumina) for 3 brain , 8 IDHwt and 5 IDHmut glioma samples. 8.62
The landscape of alternative splicing in aggressive prostate cancers 8.47
Transcriptome wide analysis of classically and alternatively activated macrophages 8.4
Transcriptional Targeting Of Oncogene Addiction In Medullary Thyroid Cancer 8.28
Transcriptional Targeting Of Oncogene Addiction In Medullary Thyroid Cancer [RNA-Seq] 8.28
Transcription differences in DLBCL cell lines U2932, DOHH2 on treatment with TK compound compared to DMSO 8.15
Expression profile of GIST48 cells with siETV1 or siFOXF1 knockdown 7.83
FOXF1 defines the core-regulatory circuitry in gastrointestinal stromal tumor (GIST) 7.83
Gene expression analysis of human CD8+ T cells treated with a DOT1L inhibitor 7.77
Mutational landscape of aggressive natural killer-cell leukemia and drug profiling highlight JAK-STAT signaling as a therapeutic target in NK-cell malignancies 7.73
Expression profiling by high throughput sequencing of tumors derived from human prostate epithelial cells transformed with the oncogenes N-Myc and myrAKT1. 7.62
Non-IG Aberrations of FOXP1 in B-Cell Malignancies Lead to an Aberrant Expression of N-Truncated Isoforms of FOXP1 7.4
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer 7.36
NEUROD1 dependent gene regulation in murine pancreatic endocrine cells and human stem cell derived insulin producing cells 7.19
Rna-seq transcriptome data for insulin-GFP+ cells differentiated from NEUROD1 knock out and NEUROD1+/+ control human embryonic stem cells. 7.19
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [RNA-Seq] 6.95
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) [RNA-seq] 6.88
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) 6.88
Antibodies That Convert Bone Marrow Into Trafficking Microglia-Like Cells Reduce Brain Amyloid 6.87
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 6.8
RNA-Seq in two Ewing sarcoma cell lines: A673 and SKNMC 6.76
CD1c+ dendritic cell activation by Plasmodium falciparum-infected red blood cells 6.74
Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre-B ALL [RNA-seq] 6.7
Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre-B ALL 6.7
Global epigenomic reconfiguration during mammalian brain development 6.57
Lymphocyte-specific chromatin accessibility pre-determines glucocorticoid resistance in acute lymphoblastic leukemia 6.57
Lymphocyte-specific chromatin accessibility pre-determines glucocorticoid resistance in acute lymphoblastic leukemia [RNA-seq] 6.57
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 6.49
Crizotinib v. DMSO in SW480 cells 6.29
Transcriptomic profiling of human CD34+ derived mast cells [RNA-Seq] 6.24
Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases 6.24
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes 6.16
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes [RNA-Seq] 6.16
RNA splicing alteration on glioblastoma and normal neural stem cells 6.13
mRNA and RNC-mRNA deep sequencing of three hepatocellular carcinoma cell lines 6.11
RNA sequencing of BT142 and TS603 cell lines 5.96
Metabolic Reprogramming Associated with Aggressiveness Occurs in the G-CIMP-High Molecular Subtypes of IDH1mut Lower Grade Gliomas 5.96
Analysis of the polyA+ RNA of LPS-treated human CD14+ monocytes 5.95
Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR+ Populations with Stem Cell Properties 5.87
Genes encoding cognate receptors for IRI-related recipient cytokines are expressed in donor livers 5.85
Human iPSC-based Modeling of Late-Onset Disease using Progerin-induced Aging 5.81
Restoration of Progranulin Expression Rescues Cortical Neuron Generation in Induced Pluripotent Stem Cell Model of Frontotemporal Dementia 5.79
Differential effects of estrogen receptor beta isoforms on glioblastoma progression 5.76
CircRNAome diversity in human mature B-cells, T-cells and monocytes 5.67
The inhibitory effect of TIAM1 on TAZ transcriptional activity and TIAM1 differentially expressed genes 5.64
List of TIAM1 differentially expressed genes in SW620 cells [RNA-seq] 5.64
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation I 5.52
The Unfolded Protein Response Regulator, ATF6, Promotes Mesodermal Differentiation 5.49
Human optic chiasm from healthy controls and multiple sclerosis patients 5.41
Multiple sclerosis and EAE 5.41
Transcriptomic profiling of human peripheral blood-derived mast cells 5.38
Genome-wide analyses of chromatin state in human mast cells reveal molecular drivers and mediators of allergic and inflammatory diseases 5.38
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 5.33
Patient iPSC-Derived Neurons for Disease Modeling of Frontotemporal Dementia with Mutation in CHMP2B 5.33
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [d7+d14] 5.29
Quantitative profiling of the UGT transcriptome in human drug metabolizing tissues [Total RNA] 5.25
The β-catenin/CBP-antagonist ICG-001 inhibits pediatric glioma tumorigenicity in a Wnt-independent manner 5.24
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing 5.13
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing [RNA-Seq] 5.13
Single Cell Analysis Reveals Unexpected Transcriptional Heterogeneity of Neural Progenitors in the Developing Human Cortex 5.04
PANC-1 and AsPC-1 human pancreatic carcinoma cells under hypoxia, nutrient starvation and low pH culture condition 5.03
Gene expression in PANC-1 and AsPC-1 human pancreatic carcinoma cells under hypoxia, nutrient starvation and low pH culture condition. 5.03
Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors 4.98
Differentially expressed genes during pancreatic bud differentiation in cellular aggregates 4.97
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets 4.95
Capturing the biology of mild versus severe disease in a pluripotent stem cell-based model of Familial Dysautonomia 4.92
EWS-Fli and LNC regulated genes in comparison to GFP samples 4.91
RNAseq of T-ALL upon long non coding rna purturbation 4.91
Examining serotonergic neuron differentiation from human iPSCs 4.9
Enhancer Domains in Gastrointestinal Stromal Tumor Regulate KIT Expression and are Targetable by BET Bromodomain Inhibition 4.89
Enhancer Domains in Gastrointestinal Stromal Tumor Regulate KIT Expression and are Targetable by BET Bromodomain Inhibition [RNA-seq] 4.89
Transcriptome analyses of iPSC-derived neural stem/progenitor cells and cerebral organoids from monozygotic twins discordant for schizoaffective bipolar disorder 4.81
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation II 4.74
Epigenetic silencing of the tumor suppressor RASSF4 favors multiple myeloma progression 4.73
Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer 4.73
The ribosomal prolyl-hydroxylase OGFOD1 decreases during cardiac differentiation, modulates translation and spliceosomal processes 4.71
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 4.64
Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 4.61
Transcriptional profiles of human blood dendritic cell (DC) subsets at steady state 4.57
HuR controls apoptosis and activation response without effects on cytokine 3′ UTRs 4.57
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (mRNA-Seq) 4.45
HSB-2 cells stably expressing LDB1 or mutant LDB1 proteins 4.44
Respecifying human iPSC-derived blood cells into highly engraftable hematopoietic stem and progenitor cells with a single factor 4.41
T47D RNA-seq and ChrRNA-seq data 4.36
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 4.36
Disruption of GRIN2B impairs differentiation in human neurons 4.34
Expansion, in vivo-ex vivo cycling and genetic manipulation of primary human hepatocytes 4.29
IFN-γ Represses M2 Gene Expression in Human Macrophages by Suppressing and Disassembling MAF-binding Enhancers [RNA-seq] 4.27
Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF 4.27
Gene expression profile of melanoma cell lines after overexpression or knockdown of KPC1 4.26
Expression analysis of genes modulated after knock-down of lncRNA CHROME. 4.2
Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing 4.19
Transcriptome analysis of human airway epithelium infected by Human Bocavirus 1 4.19
Effect of Hypoxia in Severe Preeclampsia through Epigenetic Regulation 4.15
The role of FAM46C in myeloma cells [sequencing] 4.15
The role of FAM46C in myeloma cells 4.15
Functional studies of missense TREM2 mutations in human stem cell-derived microglia 4.11
Transcriptomics profiling of CD141+ dendritic cells isolated from peripheral blood or synovial fluid of arthritis patients 4.04
RNA sequencing of lncRNAs knockdown in human pancreatic cancer cell lines 4.02
Insulin receptor associates with promoters genome-wide and regulates gene expression [RNA-seq 2] 3.95
Expression data from fresh human embryonic lung epithelial tip and stalk cells and cultured organoids derived from tip and stalk. 3.92
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas 3.83
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq] 3.83
Next Generation Sequencing Facilitates Quantitative Analysis of transcriptomes of human cord blood CD34+ cells treated with HDAC5 inhibitor 3.82
microRNA suppresses prostate cancer stem cells and metastasis by inhibiting a cohort of pro-metastasis targets including CD44, Rho GTPases and EZH2 3.8
Sequence dependency and regulatory function of dimeric NOTCH1/RBPJ complexes on coding and non-coding transcription in T-lymphoblastic leukemia 3.78
Effect of 48h treatment with 100nM GSK2879552 on T-ALL cell lines LOUCY and PEER 3.78
RNA-seq in HepG2 and IMR90 cells 3.75
Evolution of a transcriptional regulator from a transmembrane nucleoporin 3.75
Analysis of transcrptomes of Danon patient derived hiPSC-cardiomyocytes by RNA-deep Sequencing 3.72
Gene expression and genome-wide location analysis of breast cancer cell-lines 3.71
Gene expression analysis of breast cancer cell-lines 3.71
Comparison of 7 small cell lung cancer PDX models, cultured ex vivo, for response to LSD1 inhibitor RG6016/ORY1001 3.69
CHCHD2 gene KO effect in iPSC drived motor neurons 3.66
A novel target of EZH1/2 for treatment of mantle cell lymphoma 3.61
Single-nucleotide-resolution mapping of HBV promoters using CAGE 3.58
Transcriptional profile of CAOV2 ovarian cancer cells with TAZ silencing 3.57
Amiloride, an old diuretic drug, is a potential therapeutic agent for multiple myeloma 3.56
The histone H3.3K27M mutation in pediatric glioma reprograms H3K27 methylation and gene expression 3.54
Transcriptomic characterization of a human in vitro model of arrhythmogenic cardiomyopathy under topological and mechanical stimuli 3.5
Mitochondrial hypoxic stress induces RNA editing by APOBEC3G in lymphocytes 3.5
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells 3.45
Different Temporal Effects of Ebola Virus VP35 and VP24 Proteins on Global Gene Expression in Human Dendritic Cells 3.4
Transcriptomic profile of intestinal epithelial cells obtained from ileal endoscopic biopsies from newly-diagnosed, pediatric Crohn's disease patients and healthy controls. 3.37
RNA-seq analysis of YFV-17D specific and total naive CD8 T cells in humans 3.37
Brain organoids reproducibly generate the cellular diversity of the human cerebral cortex 3.35
Identification of gene signature in ascitic fluid-isolated mesothelial cells from high grade serous ovarian cancer patients 3.33
FGF2 regulation of gene expression in stable inducible Neurons 3.31
Gene expression changes associated with resistance to tagraxofusp (SL-401) 3.27
The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin Remodeling Complexes 3.27
RNA-Seq of LRRK2 G2019S Parkinson’s iPSC-derived astrocytes 3.23
Patient-derived organoids (PDOs) model treatment response of metastatic gastrointestinal cancers. 3.23
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq] 3.19
Discovery and verification of liver cancer marker genes and variable scission based on second-generation sequencing data analysis 3.18
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 3.18
Gene expression profiles of ibrutinib-responsive and ibrutinib non-responsive cells in ERBB4 expressing cancer cell lines 3.14
Parkinson’s Disease Genetic Risk in a Midbrain Neuronal Cell Line 3.13
Identification of mesothelial-to-mesenchymal gene signature in ascitic fluid-isolated mesothelial cells through RNA-sequencing 3.13
Transcriptome analysis of H9 hESC derived cerebral organoids 3.12
Gene expression profile of human multiple myeloma cell line MM.1S after knockdown of KDM6B 3.12
CHCHD10 gene KO effect in iPSC drived motor neurons 3.11
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours 3.09
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [RNA-seq] 3.09
LINE-2 transposable elements are a source of functional human microRNAs and target sites 3.09
Single cell transcriptome of peritoneal cells 3.08
RNA Seq analysis of NKX2-5 Null and Het human embryonic stem cells in cardiomyogenesis 3.08
Small molecule targets TMED9, promotes lysosomal degradation to reverse proteinopathy 3.08
Transcriptional analysis of ZIKV-infected Ifnar-/- and Ifnar+/- placentas and IFN-beta (IFN-b) or IFN-lambda (IFN-l) treated human mid-gestation chorionic villus explants 3.06
Analysis of transcriptional differences after IFN-beta (IFN-b) or IFN-lambda (IFN-l) treated human mid-gestation chorionic villus explants 3.06
Gene expression profiles of isogenic single-cell derived clones of BRAF-mutated SK-MEL-5 melanoma cell lines 3.03
Allelic expression mapping across cell lineages reveal repressor disruption among disease SNPs 2.99
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells 2.98
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells [RNA-seq] 2.98
Epigenome regulation during epidermal lineage commitment [RNA-seq] 2.94
Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples 2.94
The p30 isoform of CEBPA uncovers a silent enhancer to drive the expression of the tumor promotive factor CD73 in CEBPA mutant AML 2.92
Gene expression changes upon drug withdrawal (Mel888 cell line) 2.91
Massive parallel sequencing uncovers actionable FGFR2-PPHLN1 fusion and ARAF mutations in intrahepatic cholangiocarcinoma 2.88
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis 2.87
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis [RNA-seq] 2.87
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 2.82
Divergent expression and metabolic functions of human glucuronosyltransferases through alternative splicing 2.81
Transcriptomes of human monocytes from patients with familial hypercholesterolemia before and after statin treatment 2.78
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 2.76
Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence [RNA-seq] 2.75
Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence 2.75
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq] 2.74
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver 2.74
Antibiotics induce polarization of pleural macrophages to M2-like phenotype in patients with tuberculous pleuritis 2.72
Synaptic dysfunction in human neurons with Autism associated deletions in PTCHD1-AS 2.67
RNA seq data of Hep3B-control, Hep3B-sertraline, Hep3B-XL413, Hep3B-XL413-sertraline, Huh7-control, Huh7-sertraline, Huh7-XL413, Huh7-XL413-sertraline cells 2.66
An in vitro human liver model by iPSC-derived parenchymal and non-parenchymal cells 2.64
Generation and functional characterization of MDSC-like cells 2.61
Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma using high throughput RNA sequencing 2.61
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 2.6
N6-methyladenosine mRNA marking promotes selective translation of regulons required for human erythropoiesis [RNA-Seq] 2.55
Distinct gene expression profile of Huh7 cell lines stably overexpressing CRABP1 or 2 2.54
Rescue of Fragile X syndrome neurons by DNA methylation editing of the FMR1 gene [RNA-seq] 2.51
Rescue of Fragile X syndrome by DNA methylation editing of the FMR1 2.51
Altered mRNA splicing by mutant p53 activates oncogenic RAS in pancreatic cancer 2.5
ILF2 Regulates RNA Splicing of DNA Damage Response Genes to Confer Poor Prognosis in 1q21-Amplified Multiple Myeloma 2.49
Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state. 2.48
Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state. 2.48
Gene expression profile of regenerated CD8αα T cells and CD8αβ T cells from LMP2 T-iPSCs 2.45
RNA-seq analysis identifies different transcriptomic types and developmental trajectories of primary melanomas 2.42
Integrative Genomic and Transcriptomic Analysis Identified Candidate Genes Implicated in the Pathogenesis of Hepatosplenic T-cell Lymphoma 2.42
Hepatosplenic T cell lymphoma 2.42
Transcriptomic of MKD (MUC1 kidney disease) patient compares to normal derived kidney epithelial cells 2.42
Expression analysis of Mebendazole treated THP-1 cells in three paired samples 2.41
Low carbohydrate diet study for non-alcoholic fatty liver disease patients 2.4
UPA-Seq: Prediction of functional lncRNAs using the sensitivities to UV-crosslinking 2.4
Transcriptional profile in human S. haematobium infection 2.39
DNMT1-associated long non-coding RNA regulate global gene expression and DNA methylation in colon cancer 2.39
Clinker: visualizing fusion genes detected in RNA-seq data 2.38
Deletions in the ATAD3 gene cluster cause cerebellar developmental defects with mitochondrial DNA abnormalities owing to local cholesterol insufficiency 2.37
Ultracentifugation and nanoscale deterministic lateral displacement (nanoDLD) of samples for exRNA analysis 2.36
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements 2.34
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements [RNA-seq] 2.34
The impact of pro-inflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes 2.33
2.3
Hijacking of stress response machinery by oncogenes in acute leukaemia 2.27
Hijacking of stress response machinery by oncogenes in acute leukaemia [RNA-seq] 2.27
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 2.26
mRNA Profiling of miR-17 family inhibition using TuD lentiviral vector in HepG2 and SK-Hep1 hepatocellular carcinoma cell lines [RNA-Seq] 2.24
Lipid Nanoparticle-Mediated Delivery of Anti-miR-17 Family Oligonucleotide Suppresses Hepatocellular Carcinoma Growth 2.24
Identification of monocyte-like precursors of granulocytes as a mechanism for accumulation of PMN-MDSC in cancer 2.24
Activity-dependent transcriptional changes in human neurons 2.23
Effect of ROQUIN2(Y691F) expression on mRNA levels upon BCR stimulation 2.23
SOX10 Single Transcription Factor Based Fast and Efficient Generation of Oligodendrocytes from Human Pluripotent Stem Cells 2.23
a-synuclein accumulation in an iPSC derived model of early onset sporadic Parkinson’s Disease reveals novel drug targets 2.22
Induction of human SST and PV neurons by expressing a single transcription factor LHX6 2.22
Diffuse Large B Cell Lymphoma cell line with Acquired Resistance to PI3Kδ Inhibitor Idelalisib 2.22
Therapeutic targeting of KDM1A/LSD1 in Ewing sarcoma engages the ER-stress response II 2.2
RNA-Sequencing approach for the identification of novel long non-coding RNA biomarkers in colorectal cancer 2.19
Absence of NKG2D ligands defines human leukaemia stem cells and mediates their immune evasion 2.19
Rapid neurogenesis through transcriptional activation in human stem cell (RNA-Seq) 2.18
Transcriptomic profiling of O-GlcNAcylated mRNA-protein complexes by using OG-CLAP in HeLa cells. 2.13
A critical but divergent role of PRDM14 in human primordial germ cell fate revealed by inducible degrons 2.12
A critical but divergent role of PRDM14 in human primordial germ cell fate revealed by inducible degrons [RNA-seq] 2.12
SMN deficiency in spinal muscular atrophy causes widespread intron retention and DNA damage 2.12
Recapitulation of Human Neural Microenvironment Signatures in iPSC-Derived NPC 3D Differentiation 2.09
Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription 2.08
Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription [RNA-Seq] 2.08
High-throughput RNAi cell viability screen to identify selective targets for EWS-FLI1 positive Ewing sarcoma 2.06
Pharmacological Induction of a Progenitor State for the Efficient Expansion of Primary Human Hepatocytes 2.03
Human Pancreatic Islets Expressing HNF1A Variant Have Defective β cell Transcriptional Regulatory Networks 2.02
In Vivo Chemical Screen Nominates Valproic Acid as Pharmacologic Modulator of Hematopoietic Stem and Progenitor Cell Activity 2.01
RNA-Seq data of NCI-H82 cells expressing a Dox-On pRB (pTripZ RB1) grown in the presence or absence of DOX and then treated with vehicle or AZD2811. 2.0
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 1.99
Transcriptomic analysis of the effect of trastuzumab in human iPSC-CMs 1.99
Whole-Transcriptome Profiling of Canine and Human in Vitro Models Exposed to a G-Quadruplex Binding Small Molecule 1.99
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq] 1.99
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas 1.99
RNA-Sequencing of HepG2 cells treated with TGFBeta 1.98
KSDM1b Role in Ewing Sarcoma 1.98
The role of miR-17-92 in the miRegulatory landscape of Ewing Sarcoma (RNA-Seq) 1.97
The role of miR-17-92 in the miRegulatory landscape of Ewing Sarcoma 1.97
Serotonin-induced hyperactivity in SSRI-resistant major depressive disorder patient-derived neurons 1.96
RNA sequencing for PDX1, NGN3 and MAFA transduced iPSCs cell 1.95
Dynamic 3D chromosomal landscapes in acute leukemia [RNA-Seq] 1.94
Dynamic 3D chromosomal landscapes in acute leukemia 1.94
Characterization of human ILC2 subsets 1.94
Stem and effector CD8 T-cells from human cancers 1.94
Transcriptional profiling of microglia; current state of the art and future perspectives 1.93
CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles 1.92
CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles (RNA-seq) 1.92
Verification and rectification of cell type-specific splicing of a Seckel syndrome-associated ATR mutation using iPS cell model 1.92
RNA-Seq analysis of neurons derived from induced pluripotent stem cells reprogrammed from dental pulp 1.92
A genomic study of the contribution of DNA methylation to regulatory evolution in primates 1.88
Prostate Cancer Cell RNA-Seq (PC3E and GS689.Li) 1.87
A RUNX2-mediated Epigenetic Regulation of the Survival of p53 Defective Cancer Cells 1.85
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium 1.84
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium [RNA-Seq] 1.84
Transcriptome of EBV-infected gastric cancer cell lines 1.82
Induction of Cardiomyocyte Proliferation [pz-822_human] 1.81
Regulation of Cell Cycle to Stimulate Adult Cardiomyocyte Proliferation and Cardiac Regeneration 1.81
Transcriptional Profiling Identifies Novel Regulators of Macrophage Polarization [RNA-Seq] 1.8
Transcriptional Profiling Identifies Novel Regulators of Macrophage Polarization 1.8
Inherent DNA binding specificities of the HIF-1α and HIF-2α transcription factors in chromatin 1.78
Inherent DNA binding specificities of the HIF-1α and HIF-2α transcription factors in chromatin (RNA-seq) 1.78
Major hnRNP proteins act as general TDP-43 functional modifiers both in Drosophila and human neuronal cells. 1.74
Global gene expression analysis of human monocyte-derived dendritic cells (DCs) treated with HMGN1 (N1) and R848 alone or in combination. 1.73
Repurposing of promoters and enhancers during mammalian evolution 1.73
Critical role for Lymphocytes in Producing FLT3LG in Tumors and Driving Checkpoint Therapy-Receptive Immune Microenvironments 1.73
Transcriptome analysis of eosinophilic and noneosinophilic chronic rhinosinusitis with nasal polyps reveals distinct lncRNA expression profiles 1.72
Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease 1.7
CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation 1.69
Single-cell RNA-Seq Investigation of Foveal and Peripheral Expression in the Human Retina 1.66
RNA sequencing of HepG2 cells treated with estradiol or estrogen receptor agonist 1.65
Valproic acid attenuates hyperglycemia induced complement and coagulation cascade gene expression 1.63
RNA-seq analysis of uveal melanoma cells treated with FR900359 1.63
RNA-seq of SCLC PDX models treated with EP 1.61
Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid  during virologically suppressed HIV 1.6
Gene expression profile of human placenta from T. Cruzi infected mothers 1.6
Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma 1.59
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 1.58
Gastrointestinal Stromal Tumor Enhancers Support a Transcription Factor Network Predictive of Clinical Outcome 1.58
Gastrointestinal Stromal Tumor Enhancers Support a Transcription Factor Network Predictive of Clinical Outcome 1.58
Genome-wide maps of chromatin state and mRNA expression patterns in leukemic cell lines 1.54
Derivation of ventrical and atrial cardiomyocytes and maturation using biowires 1.53
Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain 1.52
Effect of OVO-like 1 knockdown on global transcript expression in differentiated BeWo trophoblast cells 1.52
Transcriptome analysis of Riociguat and Vehicle control treatment in human hematopoietic stem and progenitor cells 1.49
Evaluation of RNA amplification and RNA-Seq library preparation protocols for spermatozoa RNA profiling 1.48
Codon usage optimization in pluripotent embryonic stem cells [RNA-seq] 1.47
Gene expression alterations of pancreatic intraepithlial neoplasia 1.45
Expression of MERTK based on Multiple Sclerosis (MS) risk haplotype 1.44
CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells 1.43
CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells [RNA-Seq] 1.43
Sauchinone controls hepatic cholesterol homeostasis by the negative regulation of PCSK9 transcriptional network 1.4
Analyses of T-ALL (COG study) 1.39
RNA sequencing of T-ALL (COG study) 1.39
RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms, and GTPase binding in bipolar disorder 1.38
Nucleotide excision repair capacity increases during differentiation of human embryonic carcinoma cells into neurons and muscle cells 1.38
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 1.37
Role of miR-146a in neural stem cell differentiation and neural lineage determination: relevance for neurodevelopmental disorders 1.36
Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways 1.36
Leucegene: ALL sequencing 1.34
Epigenome regulation during epidermal lineage commitment 1.34
Non-coding and coding transcriptional profiles are significantly altered in pediatric Retinoblastoma tumors 1.32
Gene profiling of human adult and pediatric liver cancer cells 1.3
A Low-cost Multiplex Biomarker Assay Stratifies Colorectal Cancer Patient Samples into Clinically-relevant Subtypes 1.28
A Low-cost Multiplex Biomarker Assay Stratifies Colorectal Cancer Patient Samples into Clinically-relevant Subtypes: Singapore Cohort RNA-seq 1.28
Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes 1.27
Consequences of Ribosomal Protein Haploinsufficiency in Human Hematopoiesis 1.27
Macrophage Ad5f35 M2 Challenge 1.26
Gene activation precedes DNA demethylation in response to infection in human dendritic cells 1.24
Gene activation precedes DNA demethylation in response to infection in human dendritic cells 1.24
RNA-seq in neurons derived from iPSCs in controls and patients with schizophrenia and 22q11 del 1.23
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 1.22
Treatment of SW480 colon cancer cell induced xenografts with AZD and DBZ 1.22
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 1.22
Mutated H3 Histones Drive Human Pre-Leukemic Hematopoietic Stem Cell Expansion And Promote Leukemic Aggressiveness 1.22
Human blood CD1c⁺ dendritic cells encompass CD5-high and CD5-low subsets that differ significantly in phenotype, gene expression and functions 1.22
Transcriptome sequencing identify a recurrent CRYL1-IFT88 chimeric transcript in hepatocellular carcinoma 1.2
Self-organized amniogenesis by human pluripotent stem cells in a biomimetic implantation-like niche 1.19
A peninsular structure coordinates asynchronous differentiation with morphogenesis to generate pancreatic islets [bulk vs buds] 1.19
Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis 1.16
Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis [RNA-Seq] 1.16
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] 1.14
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma 1.12
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma (RNA-Seq) 1.12
Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4 1.1
Zika virus directly infects human peripheral neurons and induces cell death 1.08
RNA Seq of Alagille liver biopsies 1.08
Alagille_Nodder 1.08
Effect of circPTPRM on the biological behaviors of hepatocellular carcinoma cells in vitro and its clinical significance. 1.06
Aberrant splicing in B-cell acute lymphoblastic leukemia [B-ALL] 1.05
Pharmacological Induction of a Progenitor State for the Efficient Expansion of Primary Human Hepatocytes 1.05
Potent antitumor activity of Cabozantinib, a c-MET and VEGFR2 Inhibitor, in a Colorectal Cancer Patient-derived Tumor Explant Model 1.04
The age and genomic integrity of neurons after cortical stroke in humans 0.99
Time series total RNA sequencing of a differentiation of human embryonic stem cells towards trophoblast lineage 0.99
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons [RNA-Seq] 0.99
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons 0.99
Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity 0.98
Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy 0.97
Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy [RNA-Seq] 0.97
A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations 0.96
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing 0.96
RNA-Seq expression profiling of hepatocellular carcinoma and adjacent non-tumor liver tissues 0.95
Cystathionine-β-Synthase Promotes Colon Carcinogenesis 0.95
Integrating the Epigenome to Identify Novel Drivers of Hepatocellular Carcinoma 0.93
Microenvironmental-derived Regulation of HIF-Signaling Drives Transcriptional Heterogeneity in Glioblastoma Multiforme 0.92
Aging-associated patterns in the expression of human endogenous retroviruses 0.91
Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 0.89
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human] 0.89
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug 0.89
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 0.88
RNA-Seq characterization of human H1-derived NPC differentiation timecourse 0.88
The Human Testis Cell Atlas via Single-cell RNA-seq 0.87
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes] 0.87
mRNAseq of Huntington's disease and control patient iPSC-derived brain microvascular endothelial cells 0.86
S-adenosyl-methionine treatment selectively block liver cancer cell lines transformation and invasiveness by alterations of cancer- and invasion specific transcriptome and methylome 0.86
S-adenosyl-methionine treatment selectively block liver cancer cell lines transformation and invasiveness by alterations of cancer- and invasion specific transcriptome and methylome (RNA-Seq) 0.86
Age-Related Gene Expression Changes in Prostate Cancer Patients [RNA-Seq] 0.85
Age-Related Gene Expression Changes in Prostate Cancer Patients 0.85
Circular RNA profiling reveals the different distribution/characteristic and possible transport mechanism among the subcellular fractions 0.85
Non-inflammatory tumor microenvironment of Diffuse Intrinsic Pontine Glioma (DIPG) 0.82
RNA Sequencing of default, melanocyte biased and enteric human neural crest populations (NC) and neuroectoderm (CNS) 0.82
quanTIseq: quantifying immune contexture of human tumors 0.82
Genome wide impact of loss of mechanoluminal stimulation on neonatal intestine 0.78
Sex-specific gene expression differences are evident in human embryonic stem cells and during in vitro differentiation of human placental progenitor cells 0.75
Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals 0.75
Novel kinase fusion oncogenes in post-Chernobyl radiation-induced pediatric thyroid cancers 0.75
Next Generation Sequencing Facilitates Quantitative Analysis of mesoderm posterior bHLH transcription factor 1(MESP1)+ and MESP1- cells' Transcriptomes 0.74
Deep sequencing of transcript levels in pluripotent stem cells and their differentiated derivatives in all three germ layers 0.73
Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer 0.71
Tissue-resident memory T cells mediate immune homeostasis in the human pancreas through the PD-1/PD-L1 pathway 0.66
Toxicogenomics of the flame retardant tris (2-butoxyethyl) phosphate in HepG2 cells using RNA-seq. 0.66
Long noncoding RNA signatures induced by TLR7 and type I IFN signaling in activated human plasmacytoid dendritic cells 0.65
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [RNA-Seq_Hs] 0.65
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis 0.65
Functional significance of the HIV-1 Tat signature amino acid residues 0.63
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling 0.62
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling (mRNA) 0.62
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq] 0.62
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability 0.62
Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors 0.61
RNA sequencing analysis of selumetinib-resistant CRC cells lines 0.6
Expression of the mannose receptor (CD206) defines distinct populations of human colonic macrophages in health and inflammatory bowel disease 0.59
Role of COP1 on MAP kinase transcriptional output in gastrointestinal stromal tumor 0.59
Human islets of varying quality: the good, the (not so) bad and the ugly 0.58
Transcriptomic profile of T cell acute lymphoblastic leukemia (T-ALL) cell from patients in CHCQMU 0.57
Gene Expression Profile of human hepatocellular carcinoma by RNA sequencing 0.57
Zone dependent distinctive gene expression profile of the normal human liver tissue 0.56
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP 0.56
Comparative analysis of WT and ZEB1 KO cells in different stages during differentiation 0.56
TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation 0.54
Transcriptional profiling of JEG3 cells with HLA-G ablation via deletion of Enhancer L 0.52
Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma 0.52
PolyA+ RNA-seq in ALL-SIL upon TLX1 knockdown 0.52
Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24 0.52
Distinct Pathological Signatures in Human Cellular Models of Myotonic Dystrophy Subtypes 0.51
Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors 0.5
RNAseq in Alzheimer's Disease patients 0.49
Transcriptome analysis of small molecule-mediated astrocyte-to-neuron reprogramming 0.49
Common inflammatory pathways between NEC and Crohn's disease 0.46
Investigation about Monocytes in metastatic breast cancer patients under chemotherapy +/- Avastin 0.46
Epigenetic changes induced by Bacteroides fragilis toxin (BFT) 0.45
Epigenetic changes induced by Bacteroides fragilis toxin (BFT) [RNA-seq] 0.45
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 0.44
Sequencing of matched pair samples (diagnosis and relapse) in human B-cell acute lymphoblastic leukemia cells (ALL) 0.44
Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis 0.43
Gene expression analysis of human hepatocellular cancers 0.41
Development of an In Vitro Human Liver System for Interrogating Non-Alcoholic Steatohepatitis 0.41
iPSC-Derived Cholangiocytes 0.4
Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency 0.39
Functional separation of IL7Rα/KLRG1-defined CD8+ T cell populations in humans 0.38
Alternative classification of glioblastoma based on BUB1B-inhibition sensitivity 0.37
Priming mobilization of hair follicle stem cells triggers permanent loss of regeneration after alkylating chemotherapy 0.37
A monocyte gene expression signature in the early clinical course of Parkinson’s disease 0.35
Total RNA was extracted from three samples of CD33 CAR or control T cells from three different donors 0.34
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 0.33
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 0.33
Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell type specificity 0.31
PSEN1ΔE9, APPswe and APOE4 confer disparate phenotypes in human iPSC-derived microglia 0.3
Inhibition of the integrin alpha-V beta-3 reverts the paradoxical effect of levothyroxine replacement during bexarotene therapy in cutaneous T-cell lymphoma 0.29
Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence 0.29
Transcriptome profiling (RNA-seq) of CREBBP+/+ and CREBBP+/- clones of U2932 DLBCL cell line 0.29
mRNA expression profile of Lymphocytes by high-throuput sequencing 0.28
High-resolution comparative analysis of great ape genomes 0.26
The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC derived cardiomyocytes. 0.25
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions 0.24
Gene expression changes in human melanoma cell lines compared to primary melanocytes 0.24
Cooperative and Antagonistic Transcriptional Regulation by BRG/BRM [RNA-seq] 0.24
Co-regulation of transcription by BRG1 and Brm, two mutually exclusive SWI/SNF ATPase subunits 0.24
Genetic and Epigenetic Landscapes of Laterally Spreading Tumors of the Colorectum 0.24
The transcriptome and chromatin accessbility landscape of mammalian germline 0.24
Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma 0.24
RNA-Seq of the corpus callosum from 12 individuals 0.23
Increased Neanderthal ancestry in genomic regions associated with lipid catabolism in contemporary Europeans 0.23
A SRp55-regulated alternative splicing network controls pancreatic beta cell survival and function 0.22
Transcriptome landscape of human primary monocytes response upon different ligand glucocorticoids 0.21
Expression profiles of the four human major ectodermal lineages 0.19
Inhibition of ERG Activity in Patient Derived Prostate Cancer Xenografts using the Small Molecule Inhibitor YK-4-279 0.19
Gene expression from AsPC-1 cells treated with PTC596 and DMSO 0.19
Transcriptome data of temporal and cingulate cortex in the Rett syndrome brain 0.18
A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism: Liver RNA profiles of lean non-diabetic, obese non-diabetic as well as obese diabetic humans. 0.17
A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism. 0.17
Transcriptome analysis of VCaP xenografts resistant to dual therapy with abiraterone and enzalutamide 0.16
Long noncoding RNA LNMAT1 promotes lymphatic metastasis in bladder cancer 0.15
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 0.13
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples 0.13
Transcriptome profile of HepG2-expressing ATP7B-H1069Q (liver hepatocellular cells) exposed to JNK or p38 Inhibitor 0.11
Transcriptomic analysis of human iPS cells derived from fragile X syndrome patients during neural differentiation 0.1
α Cell Function and Gene Expression Are Compromised in Type 1 Diabetes 0.09
MAIT cell RNA sequencing 0.09
A toxicogenomics approach to screen chlorinated flame retardants tris(2-chloroethyl) phosphate and tris(2-chloroisopropyl) phosphate for potential health effects 0.09
mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs 0.08
Oncogenic roles of ARID5B in T-ALL 0.08
RNA-seq analysis in knockdown Jurkat samples for each factor of TAL1 complex 0.08
Next Generation Sequencing of Transcriptomes of Cutaneous Melanocytes and Metastatic Melanoma Cell Lines 0.08
Next Generation Sequencing of Transcriptomes of Cutaneous Melanocytes and Metastatic Melanoma Cell Lines (mRNA-Seq) 0.08
Transcriptomic analysis of human macrophages in 3D 0.07
Blocking expression of inhibitory receptor NKG2A overcomes tumor resistance to NK cells 0.05
Heterogeneous maintenance of human tissue resident memory T cells based on efflux capacities 0.05
RNA sequencing data of whole blood cells of normal glucose tolerant (NGT) and gestational diabetes (GDM) pregnant women 0.04
Single cell RNA-seq resolves lineage-specific activation dynamics of human blood and tissue T cells 0.04
Characterization of Human Pegivirus Infection in Liver Transplantation Recipients 0.04
Transcriptome analysis of peripheral blood monocytes 0.03
RNA-sequencing of pediatric idiopathic dilated cardiomyopathy patients and healthy controls 0.03
Pluripotent stem cell models of Blau syndrome reveal an IFN-<gamma>-dependent inflammatory response in macrophages 0.02
CD133hi, Notchhi, DP (double positive) and DN (double negative) in GBML8 and GBML20, both patient-derived glioblastoma tumorsphere cultures 0.01
A single cell reference map for human blood and tissue T cell activation 0.0


Contact Us

For scientific and technical queries contact Butte Lab @UCSF


Cite GENEVA Tool

Manuscript in Preparation