Gene Query: CTCFL

Dataset Description Geneva Score
RNA-seq and small RNA-seq analysis of BORIS/CTCFL knockdown in K562 cell line 288.65
RNA-seq analysis of BORIS/CTCFL knockdown in K562 cell line 288.65
Epigenetic mechanisms underlie the crosstalk between growth factors and a steroid hormone [HCT RNA-Seq] 115.03
XPO1 inhibition antagonizes MCL via nuclear retention of IkB: Selinexor demonstrates antitumor activities in both ibr-sensitive and ibr-resistant tumor cells 112.47
SRSF2 mutations impair hematopoiesis and alter exon recognition 50.39
Endogenous retroviruses are a source of oncogenic enhancers in acute myeloid leukemia [RNA-Seq] 48.88
Endogenous retroviruses are a source of oncogenic enhancers in acute myeloid leukemia 48.88
Quantitative analysis of bi-modal binding of BET proteins at promoters predicts I-BET sensitivity 47.02
Spliceosomal disruption of the non-canonical BAF complex in cancer 38.69
RNA-Seq in two Ewing sarcoma cell lines: A673 and SKNMC 37.87
RNAseq data from SCCOHT1 and OVCAR8 ovarian cancer cells treated with BET inhibitors 30.44
Adaptation of the Kinome Promotes Resistance to BET Bromodomain Inhibitors in Ovarian Cancer 26.25
ZRANB2 and SYF2 mediated splicing programs converging on ECT2 are involved in breast cancer cell resistance to doxorubicin 19.66
Glutaminolysis is a metabolic dependency in FLT3 ITD Acute Myeloid Leukemia unmasked by FLT3 Tyrosine Kinase Inhibition 19.61
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 18.6
Accurate annotation of human protein-coding small open reading frames 18.03
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo 17.37
Innate-like activation of mucosal-associated invariant T cells in mycobacterial infection 16.9
Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples 15.6
The Human Testis Cell Atlas via Single-cell RNA-seq (Healthy men scRNA-seq data set) 14.42
Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 12.14
Genomic expression analysis of K562 cells expressing shRNA targeting lncRNA-IIRX and control cells 11.88
RNA sequencing for human induced pluripotent stem cell cardiomyocyte differentiation 10.93
Parvovirus B19 NS1 protein induces cell cycle arrest at G2 phase 10.75
Tumor- and cytokine-primed human natural killer cells exhibit distinct phenotypic and transcriptional signatures [RNA-seq] 10.55
Tumor- and cytokine-primed human natural killer cells exhibit distinct phenotypic and transcriptional signatures 10.55
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 9.86
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 9.86
The pause-initiation limit restricts transcription activation in human cells 9.74
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 8.17
Genome-wide discovery of human splicing branchpoints [RNAse] 8.01
Neonatal and adult human testis defined at the single-cell level 7.81
MEIS2 is a novel oncogenic partner in AML1-ETO positive AML [RNA-Seq human] 7.33
MEIS2 is a novel oncogenic partner in AML1-ETO positive AML 7.33
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 7.23
Genome-wide discovery of human splicing branchpoints 6.99
Disease-associated mutation in SRSF2 misregulates splicing by altering RNA binding affinities 6.61
Reassessment of Exosome Composition 6.6
TOP2B disturbed the quality of human oocytes with advanced maternal age 6.36
Global analysis of enhancer targets: Mosaic-seq 6.15
Generation of low passage high grade serous ovarian cancer cell lines from primary tumors 5.95
Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations 5.92
Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations [RNA-seq] 5.92
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq] 5.47
circRNA-sequencing 5.46
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma 4.77
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma (RNA-Seq) 4.77
ETV7 and interferon response 4.67
Impact of ETV7 activity on interferon-stimulated gene expression in 293T cells treated with interferon alpha 4.67
SMUG1 promotes telomere maintenance through telomerase RNA end-processing 4.63
Profiling gene expression changes in ovarian cancer cells seeded on 3D organotypic culture of omentum 4.56
Selective silencing of euchromatic L1s revealed by genome-wide screens for L1 regulators 4.4
A novel target of EZH1/2 for treatment of mantle cell lymphoma 3.92
Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-thioguanisine 3.89
Enhancer Domains in Gastrointestinal Stromal Tumor Regulate KIT Expression and are Targetable by BET Bromodomain Inhibition [RNA-seq] 3.87
Enhancer Domains in Gastrointestinal Stromal Tumor Regulate KIT Expression and are Targetable by BET Bromodomain Inhibition 3.87
Comprehensive comparative analysis of 5’ end RNA sequencing methods 3.86
Gene expression profiling in metabolically heterogeneous human lung tumors 3.77
T47D RNA-seq and ChrRNA-seq data 3.61
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 3.61
RNA-seq analysis of control and CDK12-depleted ovarian cancer cells 3.57
Genome-wide CRISPR-Cas9 screen identifies druggable synthetic lethality between LSD1 and MTORC1 in MLL-translocated AML 3.49
HEK293 Heat-shock experiment 3.41
Human iPSC-based Modeling of Late-Onset Disease using Progerin-induced Aging 3.36
Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs 3.35
RNA-seq data of small cell carcinoma of the bladder (SCCB) /urothelial carcinoma (Non-SCCB) clinical samples, and bladder-PARCB cell lines 3.34
A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module 3.29
A rare subpopulation of melanoma cells with low expression of metastasis suppressor NME1 has a neural crest-like phenotype and is highly metastatic in vivo 3.22
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing [RNA-Seq] 3.22
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing 3.22
Transcriptional responses of melanoma cells to BRAF inhibition 3.2
Transcriptome of EBV-infected gastric cancer cell lines 3.14
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation 3.13
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture 3.13
Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes—GMUCT 2.0 3.1
ZEB1 insufficiency causes corneal endothelial cell state transition and altered cellular processing 3.02
Transcriptome-wide response to synthetic chromatin protein PcTF 2.91
Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq 2.87
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 2.82
RNA-Seq of cKIT+ sorted cells from 16-16.5 week old fetal testes and ovaries and RNA-Seq of TRA-1-60+ H1 hESCs 2.78
Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer 2.76
The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation 2.61
Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24 2.6
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 2.53
LncRNA expression profiling of ischemic stroke patients 2.44
Virus Mimicry in the Tumor Microenvironment Activates RIG-I Through Unshielding of Endogenous RNA in Exosomes [RNA-Seq] 2.44
To identify transcripts that are differentially expressed in the MYCN amplified vs MYCN non-amplified cell lines using Next Generation Sequencing 2.37
Genomic profiling of human spermatogonial stem cells [BulkRNA-Seq] 2.22
Human co-transcriptional splicing kinetics and coordination revealed by direct nascent RNA sequencing 2.2
Transcriptomics analysis of enteroendocrine cells following vertical sleeve gastrectomy 2.15
Transcriptomics analysis of human jejunal enteroendocrine cells after vertical sleeve gastrectomy 2.15
An siRNA screen identifies CHD4 as a target for epigenetic therapy 2.1
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 2.08
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 1.98
Rate of elongation by RNA polymerase II is influenced by specific gene features and histone modifications 1.97
Patient-derived xenograft models of non-small cell lung cancer for evaluating targeted drug sensitivity and resistance 1.97
RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining 1.94
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation 1.91
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] 1.91
The Human Testis Cell Atlas via Single-cell RNA-seq 1.89
B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis 1.86
RNA-seq of exosomes identifies lncRNA profiles that distinguish early-stage esophageal squamous cell carcinoma (ESCC) from non-malignant esophagitis 1.77
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes 1.76
RNA-seq analysis of Retinoic Acid and Non-treated Control hiPSCs 1.76
Landscape of H3K4me3 in human CD19 cells 1.74
Cellular recruitment by podocyte-derived pro-migratory factors in assembly of the human renal filter 1.65
Transcriptome sequencing of K-562 cells 1.65
Global transcriptional analysis of human extended pluripotent stem cells, human primed pluripotent stem cells, mouse extended pluripotent stem cells, and mouse embryonic stem cells by RNA-seq 1.62
Global transcriptional analysis and genome-wide analysis of chromatin state in extended pluripotent stem cells, primed pluripotent stem cells, and naïve pluripotent stem cells 1.62
Genome-wide chromatin analysis of Ewing sarcoma 1.59
Genome-wide chromatin analysis of Ewing sarcoma (RNA-seq) 1.59
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 1.57
TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation 1.57
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data 1.53
The conserved transcriptional landscapes in human spermatogenesis 1.51
TALENs-mediated gene disruption of FLT3 in leukemia cells: Using genome-editing approach for exploring the molecular basis of gene abnormality 1.5
Non-coding and coding transcriptional profiles are significantly altered in pediatric Retinoblastoma tumors 1.47
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer 1.38
RNA-seq of YB5 and MCF7 treated with different doses of decitabine 1.35
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex 1.34
Whole-Transcriptome Profiling of Canine and Human in Vitro Models Exposed to a G-Quadruplex Binding Small Molecule 1.34
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 1.33
Circular RNA profiling reveals the different distribution/characteristic and possible transport mechanism among the subcellular fractions 1.32
Evaluation of RNA amplification and RNA-Seq library preparation protocols for spermatozoa RNA profiling 1.31
High-throughput RNA sequencing on circular RNA profiles of human triple-negative breast cancer and adjacent normal tissues 1.3
Treatment of SW480 colon cancer cell induced xenografts with AZD and DBZ 1.22
Integrative classification of human coding and non-coding genes based on RNA metabolism profiles 1.19
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq] 1.16
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis 1.16
Human lymph nodes maintain a unique subset of resident memory T cells with high functional potential important for protective immunity and immunotherapies 1.14
Transcriptomic Analysis of Endothelial Cells from Fibrovascular Membranes in Proliferative Diabetic Retinopathy 1.14
Widespread Transcription beyond mRNA 3’ Ends Yields Abundant Regulatory RNAs 1.12
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 1.08
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 1.08
Gene expression profiles of 4-1BB+PD-1-high, 4-1BB-PD-1-high, and PD-1-int tumor-infiltrating CD8 T cells in hepatocellular carcinoma 1.01
CRISPR-Cas9 combinatorial KO of epigenetic regulators in human ovarian cancer cells 0.98
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells 0.97
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq] 0.97
FMR1 reactivating treatments in Fragile X iPSC-derived neural progenitors in-vitro and in-vivo 0.97
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells 0.94
Expression profiles of the four human major ectodermal lineages 0.93
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion 0.92
RNA expression profiles comparing primary and omental ovarian carcinoma samples 0.92
K562 polyA RNA-Seq 0.92
Analysis of gene expression, motif and pattern of m6A modified region and m6A enrichment level in Ocular melanoma and Melanocyte cell lines. Gene expressin analysis of METTL3 knock down in PIG1, ALKBH5 knock down and HINT2 over expression in OCM1. 0.89
Transcriptome Analysis of PBMCs in peripheral blood of patients with hepatocellular carcinoma 0.89
SnapShot-Seq: a method for extracting genome-wide, in vivo mRNA dynamics from a single total RNA sample 0.88
Intrahepatic MAIT cell gene expression revealed by RNA-seq 0.87
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq] 0.87
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver 0.86
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq] 0.86
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 0.84
The effect of insulin on mRNA transcription of human pluripotent stem cells 0.84
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) 0.83
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq] 0.83
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 0.82
Specific inhibition of DPY30 activity by peptides suppresses blood cancer cell growth 0.82
The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-Resistant, sensitive and healthy control 0.8
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons [RNA-Seq] 0.8
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons 0.8
m6A level and isoform characterization sequencing (m6A-LAIC-seq) reveal the census and complexity of the m6A epitranscriptome 0.79
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 0.78
POLR3G Dependent PolyA+ and smallRNA Transcriptomes in Human Pluripotent Stem Cells 0.78
RNA polymerase in pre-B-ALL cell lines 0.77
Quantitative comparison between cellular mRNAs and exosomal mRNAs in human iPSC-derived motor neurons 0.76
Interactions of aCPs with Cytosine-rich Polypyrimidine Tracts Enhance Splicing of Cassette Exons 0.76
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) 0.75
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) [RNA-seq] 0.75
Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production 0.75
TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding 0.74
Differential roles of human PUS10 in miRNA processing and tRNA pseudouridylation 0.72
RNA-sequencing of highly pure synovial tissue macrophages reveals two distinct osteoarthritis subgroups that indicate different disease mechanisms. 0.72
Transcript abundance in A-T-derived iPSC: Comparing isogenic cells to unrelated individual 0.71
NRDE2 negatively regulates nuclear exosome functions 0.71
RNA-Seq study of Cell lines rendered resistant to idelalisib and ibrutinib 0.7
Identification of a core p53 transcriptional program with highly fractionated tumor suppressive activity 0.7
GRO-seq from HCT116, MCF7 and SJSA cell lines treated with DMSO and Nutlin 0.7
Total RNA sequencing of prospective axial stem cell cultures derived from human pluripotant stem cells 0.69
RNA sequencing analysis of human embryonic stem cells and axial progenitors 0.69
Extracellular matrix hydrogel derived from decellularized tissues enables endoderm organoids culture 0.68
DRB/GRO-Seq -/+ UV 0.68
Ultracentifugation and nanoscale deterministic lateral displacement (nanoDLD) of samples for exRNA analysis 0.68
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.67
TT-Seq captures the human transient transcriptome 0.63
A compendium of promoter-centered long-range chromatin interactions in diverse human tissues and cell types 0.63
UV-Irradiation Induces a Noncoding RNA that Functionally Opposes the Protein Encoded by the Same Gene 0.62
U1 snRNP telescripting regulates size-function stratified human genome 0.62
RNA-Seq of the corpus callosum from 12 individuals 0.61
A runaway PRH/HHEX-Notch3 feedback loop drives cholangiocarcinoma (RNA-Seq) 0.61
mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs 0.6
Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs 0.59
Gene expression activation in CLL mediated by MSCs contact 0.59
Solid phase chemistry to covalently and reversibly capture thiolated RNA 0.56
Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells 0.56
AQP5-Expressing Cells Serve as Stem Cells and Cancer Origins in the Distal Stomach 0.56
Post-transcriptional manipulation of TERC reverses molecular hallmarks of telomere disease 0.55
Genomic basis for clinical response to histone deacetylase inhibition in advanced urothelial carcinoma 0.54
Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts 0.54
MBNL1-dependent modulation of gene expression in MDA-MB-231 breast cancer cells 0.54
Molecular Hallmarks of Experimentally Acquired Immunity to Malaria [Pilot Study] 0.53
siRNA-mediated knockdown 0.53
RNA editing in nascent RNA affects pre-mRNA splicing 0.53
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] 0.53
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 0.53
Differential expression of long non‑coding RNA and mRNA in children with Henoch‑Schönlein purpura nephritis 0.52
DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats 0.52
Targeting Taxane-Platin Resistant Lung Cancers with JumonjiC Lysine Demethylase Inhibitors 0.52
Targeting Taxane-Platin Resistant Lung Cancers with JumonjiC Lysine Demethylase Inhibitors (RNA-Seq) 0.52
Human neutrophil genome during PMA- and E. coli encounter-induced activation 0.51
RNA-seq profiling of the human neutrophil genome during PMA- and E. coli encounter-induced activation 0.51
RNA m5C Methylation in breast cancer using MeRIP-Seq 0.51
Comparative whole-transcriptomic analysis between normal and AKAP-Lbc-depleted human embryonic stem cells 0.5
Targeted enhancer activation by a subunit of the integrator complex 0.5
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 0.5
Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration 0.49
Transcriptomic insights into human decidual and peripheral blood CD4 T cells 0.49
Studying the selectivity of a targeted small molecule degrading a hypoxia-associated non-coding RNA 0.49
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes 0.49
cKIT+ sorted cells from 57-137 day old fetal testes and ovaries 0.48
RNA-Seq of cKIT+ sorted cells from 53-137 day old fetal testes and ovaries and RNA-Seq of TRA-1-81+ H1 and UCLA1 hESCs. 0.48
RNA-Sequencing of human dermal lymphatic endothelial cells (HDLEC) treated with siRNA targeting YAP/TAZ and YAP5SA 0.48
Transcription-dependent control of stem cell self-renewal and differentiation by the splicing factor U2AF1 0.48
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 0.47
Intron retention induced by microsatellite expansions as a disease biomarker. 0.47
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 0.47
Genetic Tagging During Human Mesoderm Differentiation Reveals Tripotent Lateral Plate Mesodermal Progenitors 0.47
RNA-seq transcriptonal profiling in human K562 cells with or without dCas9 and sgRNAs 0.46
In situ CAPTURE of chromatin interactions by biotinylated dCas9 0.46
4sU-seq of HFF exposed to salt and heat stress 0.46
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes 0.45
GIST cell cycle dysregulation is required for progression to high-risk disease but not for resistance to kinase inhibitors 0.44
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma 0.43
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (RNA-Seq) 0.43
Genome-wide transcriptome analysis of NIPBL iPSC and commited cardiomyoctes 0.42
Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed 0.42
LMO1 Synergizes with MYCN to Promotes Neuroblastoma Initiation and Metastasis 0.42
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 0.42
Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing 0.42
HNF1A deficiency impairs β-cell fate, granule maturation and function 0.42
CROP-Seq in Primary Human T Cells 0.41
Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing 0.41
Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing [RNA-Seq] 0.41
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells (longRNA-seq) 0.4
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells 0.4
RNA-seq in endometrial stromal tumors 0.4
Global unleashing of transcription elongation waves in response to genotoxic stress restricts somatic mutation rate 0.4
Proteomics identifies a marker signature of MAPKi resistance in melanoma 0.4
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 0.39
Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes 0.39
Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient 0.39
Probing the Global Cellular Responses to Lipotoxicity Caused by Saturated Fatty Acids 0.39
Identification and characterization of circular RNAs as a new class of putative biomarkers in human blood 0.39
TrapSeq: An RNA Sequencing-based pipeline for the identification of genetrap insertions in mammalian cells 0.38
Novel mutations segregating with Complete Androgen Insensitivity Syndrome and their molecular characteristics. 0.38
The mRNA expression analysis of psoriasis skin lesion mesenchymal stem cell 0.38
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics] 0.38
Genome-Wide Transcriptional Effects of the Anti-Cancer Agent Camptothecin 0.38
NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements 0.38
Apoptosis enhancing drugs overcome innate platinum resistance in CA125 negative tumor initiating populations of high grade serous ovarian cancer 0.37
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 0.37
C9/ALS Human Embryonic Stem Cells and C9/ALS Induced Pluripotent Stem Cells 0.37
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation 0.37
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation (RNA-Seq) 0.37
Generating Patterned Kidney Organoids for Studying Development and Diseases 0.37
Tristetraprolin disables prostate cancer maintenance by impairing proliferation and metabolic function 0.36
Next Generation Sequencing Facilitates Quantitative Analysis of Retinoblastoma Transcriptomes 0.35
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq) 0.35
HLA peptides derived from tumor antigens induced by inhibition of DNA methylation for development of drug-facilitated immunotherapy 0.35
Mapping of DHT-responsive or -independent AR-binding sites induced by activated Src in prostate cancer cell lines 0.35
Mapping of DHT-responsive or -independent AR-binding sites induced by activated Src in prostate cancer cell lines [RNA-seq] 0.35
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [ZNF787] 0.34
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients 0.34
Characterizing the Chemoresistant Ovarian Cancer Population using the Heterogeneous PDX 0.34
HEXIM1 is induced by DHODH inhibition to suppress melanoma 0.34
HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq] 0.34
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 0.33
Unique features and clinical importance of acute alloreactive immune responses 0.33
nELAVL HITS-CLIP in Alzheimer's Disease patients 0.33
Functional Significance of U2AF1 S34F Mutation in Lung Adenocarcinomas 0.33
Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue 0.32
Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline 0.31
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 0.31
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 0.31
Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B-cell Responses to Influenza Hemagglutinin 0.31
Transcriptome of human keratinocytes with or without HPV16 oncogene expression 0.31
Comparing effects of perfusion and hydrostatic pressure on human chondrocytes using gene profiles 0.3
Transcriptome of iPSC-derived Cerebral Organoids with Heterozygous Knockout in CHD8 0.3
Biochemical fractionation of HEK293 nuclei and RNA-seq of chromatin-associated and soluble-nuclear RNA 0.3
Patient-derived xenograft platform for metastatic melanoma 0.3
UV_24h_GRO-Seq 0.29
Transcriptomic profiling of O-GlcNAcylated mRNA-protein complexes by using OG-CLAP in HeLa cells. 0.29
Gene expression of collecting duct carcinoma of the kidney 0.28
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation 0.28
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress (Total RNA) 0.28
Transcriptional profiles of normal human mature B cells 0.28
Aging Human Hematopoietic Stem Cells Manifest Profound Epigenetic Reprogramming of Enhancers That May Predispose to Leukemia (RNA-Seq of LMNA KD) 0.28
Recurrent alterations of TNFAIP3 (A20) in T-cell large granular lymphocytic leukemia 0.28
Tumor suppressor SMARCB1 suppresses super-enhancers to govern hESC lineage determination 0.27
Differential expression of human parthenogenic stem cells, neural stem cells and DA progenitors. 0.27
Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors 0.27
Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways 0.27
circRNA-sequencing 0.26
Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 0.26
Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 [RNA-seq] 0.26
Widespread backtracking by RNA pol II is a major effector of gene activation, 5’ pause release, termination and transcription elongation rate 0.26
α Cell Function and Gene Expression Are Compromised in Type 1 Diabetes 0.25
Profiling and bioinformatics analyses reveal differential expression of circular RNA in tongue cancer revealed by high-throughput sequencing 0.25
Identification of PRMT5-dependent genes in ESA+CD24lowCD44+ MCF7 cells 0.25
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 0.25
Antiviral and anti-inflammatory properties of novel anti-HIV candidate ABX464 promotes specifics RNA splicing while preserving cellular RNA integrity. 0.24
An optimization system for isolating and sequencing of single human colon cancer cells 0.24
Capturing the Interactome of Newly Transcribed RNA (RICK) 0.24
Capturing the Interactome of Newly Transcribed RNA 0.24
The age and genomic integrity of neurons after cortical stroke in humans 0.24
Transcriptomic responses to Ivacaftor and prediction of Ivacaftor clinical responsiveness 0.24
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 0.24
Microprocessor mediates transcription termination in long noncoding microRNA genes 0.23
Exploring the RNA landscape of endothelial exosomes 0.23
Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes 0.23
RNA-seq data 0.23
Characterization and therapeautic application of mesenchymal stem cells with neuromesodermal origin from human pluripotent stem cells 0.23
Epigenomic plasticity enables human pancreatic alpha to beta cell reprogramming 0.23
SLAM-seq for K562 endogenous mRNA decay 0.23
Detailed genomic and molecular characterization of Indian induced pluripotent stem cell lines 0.22
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium [RNA-Seq] 0.22
Waterpipe Smoking Induces Epigenetic Changes in the Small Airway Epithelium 0.22
A radiolabeling-free, qPCR-based method for locus-specific pseudouridine detection 0.22
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 0.22
Organoids derived from directly reprogrammed human hepatocytes for modeling liver cancer initiation 0.22
Gene expression profiles of tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.22
The DNA methylation landscape of human melanoma [RNA-Seq] 0.21
The DNA methylation landscape of human melanoma 0.21
Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence 0.21
Fibroblasts in cholesteatoma activate osteoclasts. 0.21
Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses 0.21
Expression changes in melanoma cell lines pre MAPKi treatment vs. post-MAPKi resistance (RNA-seq_CellLine.batch2) 0.2
RNA sequencing data of whole blood cells of normal glucose tolerant (NGT) and gestational diabetes (GDM) pregnant women 0.2
Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype 0.2
Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype [RNA-seq] 0.2
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu 0.2
CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia 0.2
Functional and genomic characterization of a xenograft model system for the study of metastasis in triple-negative breast cancer. 0.2
Metastasis in triple-negative breast cancer 0.2
Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma 0.2
U2AF1 mutations alter splice site recognition in hematological malignancies 0.2
Transcriptome analysis of eosinophilic and noneosinophilic chronic rhinosinusitis with nasal polyps reveals distinct lncRNA expression profiles 0.2
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 0.2
Cell Type-Specific Chromatin Signatures Underline Regulatory DNA Elements in Human Induced Pluripotent Stem Cells and Somatic Cells 0.2
Reversible LSD1 Inhibition with HCI-2509 induces the p53 gene expression signature in high-risk neuroblastoma cells 0.2
A next generation sequencing based approach to identify extracellular vesicle mediated mRNA transfers between cells 0.2
RNA-seq in HT-29 colorectal cancer cells after F. nucleatum treatment 0.2
4sUDRB-seq: measuring transcription elongation and initiation genomewide 0.19
Profiling in vivo Bone Lesion (IVBL) and Orthotopic tumors by Next Generation Sequencing 0.19
Priming mobilization of hair follicle stem cells triggers permanent loss of regeneration after alkylating chemotherapy 0.19
RNA-sequencing 0.19
High-depth RNA sequencing of isogenic wild-type, PIK3CA-WT/H1047R and PIK3CA-H1047R/H1047R human iPSCs 0.19
Expression Analysis of dic(1;7)(q10;p10) in Myelodysplastic Syndromes (MDS) compared to control cohort and therapy-related Myeloid Neoplasms (t-MN) 0.18
A Distinct Epigenetic Program Underlies the 1;7 Translocation in Myelodysplastic Syndromes (MDS) 0.18
The LIN28B/let-7 axis is a novel therapeutic pathway in Multiple Myeloma 0.18
Transcriptomic profiling of sequential tumours from breast cancer patients provides a global view of metastatic expression changes following endocrine therapy 0.18
Radiomic and gEnomic approaches for the enhanced DIagnosis of REnal Cancer (REDIRECt): A translational pilot study 0.18
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples 0.18
CircRNAome diversity in human mature B-cells, T-cells and monocytes 0.18
Circular RNAs are super abundant in cervical tumor and plasma detected by high throughput microarray 0.17
Circular RNAs are super abundant in cervical tumor and plasma detected by high throughput microarray [RNA-Seq] 0.17
Transcriptome splicing analysis in K562 cells expressing rare and private spliceosomal mutations 0.17
Interferon receptor signaling pathways regulating PD-L1 and PD-L2 expression 0.16
RNA-sequencing of bulk CD19+ Thymic B cells from mice and humans 0.16
RNA-sequencing of bulk CD19+ Thymic B cells from young (3 month - 4 year) and old (42 - 61 years) humans 0.16
RNA-seq of overgrown interscapular adipose tissue with biallelic MFN2 mutations 0.16
Time series total RNA sequencing of a differentiation of human embryonic stem cells towards trophoblast lineage 0.16
Critical role for Lymphocytes in Producing FLT3LG in Tumors and Driving Checkpoint Therapy-Receptive Immune Microenvironments 0.16
Transcriptomic analysis of human iPS cells derived from fragile X syndrome patients during neural differentiation 0.16
LncPRESS1 is a p53-regulated lncRNA that safeguards pluripotency by disrupting SIRT6 mediated de-acetylation of histone H3K56 0.16
The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion 0.15
Paclitaxel plus Cirmtuzumab Achieves Greater Clearance of Patient-derived Xenografts By Targeting ROR1+ Breast Cancer Stem Cells 0.15
Human pluripotent stem cell-derived brain tumor model uncovered embryonic stem cell signature as a key driver in atypical teratoid/rhabdoid tumor (RNA-Seq) 0.15
Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response 0.15
Low-Cell-Number, Single-Tube Amplification (STA) of RNAs Revealed miRNA Changes from Pluripotency to Endothelium 0.15
RNA sequencing of 13 T-cell acute lymphoblastic leukemia patients (5 TCRAD-MYC translocated T-ALL_8TAL1-LMO2 T-ALL) 0.14
A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations 0.14
lncRNA expression analysis in patients with eosinophilic and neutrophilic asthma 0.14
Enhancer divergence and cis-regulatory evolution in the human and chimpanzee neural crest 0.14
RNA sequencing of prostate cancer and normal tissue from African Americans and European Americans 0.14
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 0.14
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 0.14
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 0.14
RNA sequencing with KSHV infection and enrichment for circular RNAs 0.14
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing 0.14
Influenza Vaccination Primes Human Myeloid Cell Cytokine Secretion and Natural Killer Cell Function 0.14
In vitro modeling of human germ cell development using pluripotent stem cells 0.14
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation [bulk] 0.14
Aging Human Hematopoietic Stem Cells Manifest Profound Epigenetic Reprogramming of Enhancers That May Predispose to Leukemia (RNA-Seq of HSCe) 0.13
Transcriptome profiling identified a 3-lncRNA regulatory network in transthyretin against glucose induced hRECs dysfunction 0.13
Triple vectors expand AAV transfer capacity in the retina 0.13
A novel Menin-MLL inhibitor induces specific chromatin changes and eradicates disease in models of MLL-rearranged leukemia [RNA-Seq II] 0.13
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq] 0.13
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability 0.13
Role of NuRD subunits CHD3 and CHD4 in human melanoma cells 0.13
Role of NuRD subunits CHD3 and CHD4 in human melanoma cells (RNA-seq) 0.13
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.13
ChIPseq and RNAseq analysis of T47D cells with/without silencing TRPS1/CHD4 0.13
SHP2 Drives Adaptive Resistance to ERK Signaling Inhibition in Molecularly Defined Subsets of ERK-dependent Tumors 0.13
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery 0.12
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery (RNA-seq data set) 0.12
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 0.12
Transcriptome data from human endocrine cells recovered from mouse grafts with pre-engraftment controls 0.12
Diverse and Targetable Kinase Alterations Drive Histiocytic Neoplasms 0.12
Identification and mitigation of pervasive off-target activity in CRISPR-Cas9 screens for essential non-coding elements 0.12
Alteration of the microRNA network during the progression of Alzheimer’s disease 0.12
Human Tfh cell RNA bulk sequencing 0.12
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 0.12
Transcription elongation regulates genome 3D structure 0.12
Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells [RNA-Seq] 0.12
Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells 0.12
RNA-seq analysis of control and ZC3H18-depleted ovarian cancer cells 0.12
Transcriptomic profiling of cleavage-resistant RIPK1 induced autoinflammation syndrome patients 0.12
Total RNA-seq in ALL-SIL upon TLX1 knockdown 0.11
The Regulation of IFN Type I Pathway Related Genes RSAD2 and ETV7 Specifically Indicate Antibody-Mediated Rejection After Kidney Transplantation 0.11
MLL-AF4 Spreading Identifies Binding Sites that Are Distinct from Super-Enhancers and that Govern Sensitivity to DOT1L Inhibition in Leukemia. 0.11
Prediction of bacterial infection outcome using single cell RNA-seq analysis of human immune cells [sorted population Bulk RNA-seq] 0.11
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis 0.11
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [RNA-Seq_Hs] 0.11
Transcriptomic profile of T cell acute lymphoblastic leukemia (T-ALL) cell from patients in CHCQMU 0.11
Identification of transcripts altered upon LIN-41 knockdown in human embryonic stem cells 0.11
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing 0.1
Effects of plasticizers (bisphenol A, bisphenol AF) and an herbicide in MCF7 human breast cancer cells 0.1
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 0.1
High-efficiency RNA-based reprogramming of human primary fibroblasts 0.1
Epigenetic reprogramming of immune cells in women with PCOS impact genes controlling reproductive function [RNAseq] 0.1
Epigenetic reprogramming of immune cells in women with PCOS impact genes controlling reproductive function 0.1
Single cell RNA-seq resolves lineage-specific activation dynamics of human blood and tissue T cells 0.1
IL-21/type I interferon interplay regulates neutrophil-dependent innate immune responses to Staphylococcus aureus 0.09
Transcriptomic analysis of healthy donor and Sickle Cell Disease (SCD) hematopoietic stem/progenitor cells 0.09
Epigenome Editing by CRISPR/Cas9 Repressors for Silencing of Distal Regulatory Elements 0.09
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration [RNA-seq2] 0.09
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins 0.08
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development 0.08
Genome-wide mapping of TEL-AML1 targets in acute leukemia 0.08
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions 0.08
Transcriptome analysis reveals differential splicing events in IPF lung tissue 0.08
Gene expression profiles of PD1-high, PD1-intermediate, and PD1-negative tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.08
Transcriptome of human ILC2s; primary vs IL-1b-primed 0.08
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling 0.08
RNA-seq of Human neck of femur (NOF) fracture hip and osteoarthritic (OA) cartilage 0.07
Long noncoding RNA ROCR contributes to SOX9 expression and chondrogenic differentiation of human mesenchymal stem cells 0.07
RNA profiling Analysis of the Serum Exosomes Derived from Active and Latent M.tuberculosis infectious Patients 0.07
Transcriptomic analysis of iPSC and ESC challenged with atmospheric or physiological oxygen 0.07
Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer 0.07
Whole transcriptome profile of citrulline-specific B cells from patients with rheumatoid arthritis 0.07
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling 0.07
Global transcriptome analysis of WT versus HEB-/- hESCs 0.07
In vivo generation of post-infarct human cardiac muscle by laminin-promoted cardiovascular progenitors [LN-521 or LN-521+LN-221] 0.06
Integrative analysis of mRNA and lncRNA profiles identified pathogenetic lncRNAs in esophageal squamous cell carcinoma 0.06
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 0.06
Gene expression analysis of human hepatocellular cancers 0.06
Patient-iPSC-derived kidney organoids show functional validation of a ciliopathic renal phenotype 0.06
Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq 0.06
Mesothelioma xenografts in nude mice: PBS treated versus pirfenidone treated 0.05
Characterization of EZH2-deficient human embryonic stem cells [ChIP-seq and bulk RNA-seq] 0.05
Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [Primary RNA-Seq] 0.05
High-throughput RNA sequencing on circular RNA profiles of human bladder cancer tissues and normal bladder tissues 0.05
Transcriptomes of human monocytes from patients with familial hypercholesterolemia before and after statin treatment 0.05
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq] 0.05
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes] 0.05
The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains 0.04
Recovery and analysis of nascent RNA 0.04
The Developmental Heterogeneity of Human Natural Killer Cells Defined by Single-cell Transcriptome 0.04
RNA-seq analysis of hPSC-derived brain pericyte-like cells, hPSC-derived neural crest stem cells, and primary human brain pericytes 0.04
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues] 0.04
Total RNA-Seq data from leukemic patients with complex structural variants 0.04
Migration through a small pore disrupts inactive chromatin organisation in neutrophil-like cells [RNA-seq] 0.04
RNA-seq and Hi-C sequencing of neutrophil-like cells migrated through large or small pores 0.04
Universal alternative splicing of noncoding exons 0.04
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells [GRO-seq] 0.04
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells 0.04
Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity 0.04
Dynamic gene expression in T-ALL following treatment and release of gamma-secretase inhibition [GRO-Seq] 0.04
The SS18-SSX fusion oncoprotein hijacks BAF complex targeting and function to drive synovial sarcoma [RNA-Seq Tumor] 0.04
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma non-targeting shRNA negative control (SHC002V) with puromycin selection RNAseq 0.04
MLL-AF4 binds directly to a BCL-2 specific enhancer and impacts H3K27 acetylation 0.03
SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression 0.03
MicroRNA-125a-5p overexpression in human macrophages 0.03
Gene expression for surgically treated pancreatic cancer after one neoadjuvant vaccine dose 0.03
Deep RNA sequencing of the human placental transcriptome 0.03
A single cell reference map for human blood and tissue T cell activation 0.03
Enhancer activation during EGF response 0.02
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells 0.02
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 0.02
Next generation sequencing of advanced non-castrate prostate cancer treated with docetaxel chemotherapy 0.02
Differences in miRNA Detection Levels are Technology and Sequence Dependent 0.02
Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS] 0.02
A single-cell transcriptome atlas of the human pancreas 0.01
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 0.01
Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles 0.01
Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing 0.01
Widespread regulated alternative splicing of single codons accelerates proteome evolution 0.0
Transcriptomic profile of intestinal epithelial cells obtained from ileal endoscopic biopsies from newly-diagnosed, pediatric Crohn's disease patients and healthy controls. 0.0
CT Irradiation Induced Changes of Gene Expression within Peripheral Blood Cells 0.0
Pro-angiogenic Ginsenoside F1 and Rh1 Inhibit Vascular Leakage by Modulating NR4A1 0.0


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