Gene Query: DDX39B

Dataset Description Geneva Score
Argonaute proteins couple chromatin silencing to alternative splicing 99.47
Argonaute proteins couple chromatin silencing to alternative splicing (RNA IP-Seq) 99.47
TFAP2C signalling in human fibroblasts 83.79
Genome-wide MAF1-dependent regulation of RNA polymerase III transcription 45.77
Genome-wide MAF1-dependent regulation of RNA polymerase III transcription [RNA-Seq] 45.77
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression 38.11
A radiolabeling-free, qPCR-based method for locus-specific pseudouridine detection 34.75
Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation 31.58
Alteration of the microRNA network during the progression of Alzheimer’s disease 29.82
Regulation of cellular heterogeneity and rates of symmetric and asymmetric divisions in triple-negative breast cancer 28.44
RNA-seq from control and macroH2A1-depleted IMR90 primary human lung fibroblasts 26.23
Exploring the role of macroH2A1 in transcription regulation in IMR90 primary human lung fibroblasts with RNA-seq and ChIP-seq 26.23
Transcriptomic characterization of a human in vitro model of arrhythmogenic cardiomyopathy under topological and mechanical stimuli 23.64
mRNA-sequencing of U87 glioblastoma and DAOY medulloblastoma spheroidal aggregates undergoing electrotaxis 23.32
Comparison of microRNA Profiling Platforms 22.03
Comparison of microRNA Profiling Platforms (HTS) 22.03
Efficient and quantitative high-throughput tRNA sequencing 21.82
ENPP1 Mutation Causes Recessive Cole Disease by Altering Melanogenesis 21.33
The effect of Foxc1 deficiency on undifferentiated and differentiated human primary keratinocytes 21.11
Simultaneous quantification of antibody-RNA conjugates and the transcriptome from fixed cells by RAID 20.84
Human cells contain natural double-stranded RNAs with potential regulatory capacity 19.11
Cellular gene expression during Hepatitis C Virus replication revealed by Ribosome profiling 17.42
Presence of NAD+-capped RNA in human cells: function and removal by the DXO deNADing Protein 17.03
RNA-Seq profiling in PBMCs and spinal cord from ALS patients and healthy controls 16.68
Comprehensive RNA-Seq profiling in PBMCs of ALS patients and healthy controls 16.68
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation 16.31
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation [bulk RNA-Seq] 16.31
Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes 15.62
Transcriptome-wide study of the response of human trabecular meshwork cells to the substrate stiffness increase 15.59
Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid  during virologically suppressed HIV 15.32
tRNA modification landscape selectively controls mitochondrial translation efficiency in MERRF 15.02
3’ Uridylation Expands miRNA Target Repertoire 14.92
Rorc disruption in human FG pancreatic cancer cells 14.38
RNA-sequencing in irradiated and normal A549 cells. 14.28
Identification of Atrial Fibrillation associated genes and functional non-coding variants 14.22
Genome-wide CRISPR-Cas9 screen identifies druggable synthetic lethality between LSD1 and MTORC1 in MLL-translocated AML 13.83
Transcriptome-wide analysis of the role of HTLV-1 Tax PBM in T-Cells from infected humanized-mice (hu-Mice) 13.74
miR-126 Orchestrates an Oncogenic Program in B-Cell Precursor Acute Lymphoblastic Leukemia 13.46
LINC00520 is Induced by Src, STAT3, and PI3K and Plays a Functional Role in Breast Cancer 13.39
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 13.38
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 12.95
Decrease in EZH2 histone methyltransferase mediates the effects of fluid shear stress (FSS) in endothelial cells 12.67
Effects of human adipose tissue-derived and umbilical cord tissue-derived mesenchymal stem cells in a dextran sulfate sodium-induced mouse model 12.62
Comparative transcriptomic analysis of human and Drosophila extracellular vesicles reveals extensive conservation 12.35
Comparative Transcriptomics of Triple Negative Breast Cancer Stem Cells and Differentiated Tumor Cells Identifies Teneurin-4 as a Potential Therapeutic Target 12.21
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription 11.99
Intrahepatic MAIT cell gene expression revealed by RNA-seq 11.75
Montelukast counteracts the influenza virus-induced block in unfolded protein stress response and reduces virus multiplication 11.75
Expansion, in vivo-ex vivo cycling and genetic manipulation of primary human hepatocytes 11.6
Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq 11.28
Transcriptome data from human endocrine cells recovered from mouse grafts with pre-engraftment controls 11.1
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] 11.07
A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development [BM low-input mRNA-seq] 11.03
Mitochondrial dsRNA triggers antiviral signalling in humans 11.01
Exploring the RNA landscape of endothelial exosomes 10.99
mRNA expression profile of Lymphocytes by high-throuput sequencing 10.94
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 10.83
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 10.76
Regulation of Lipids is Central to Replicative Senescence 10.75
MeRIP sequencing reveals angiogenic properties of vascular endothelial cells 10.74
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 10.68
IFN-g Regulates mTORC1, Cellular Metabolism and mRNA Translation to Potentiate Inflammatory Macrophage Activation [RNA-Seq] 10.57
IFN-g Regulates mTORC1, Cellular Metabolism and mRNA Translation to Potentiate Inflammatory Macrophage Activation 10.57
Low-Cell-Number, Single-Tube Amplification (STA) of RNAs Revealed miRNA Changes from Pluripotency to Endothelium 10.51
RNA sequencing of primary human platelets and in vitro cell lines 10.45
Single-nucleotide-resolution mapping of HBV promoters using CAGE 10.43
Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2 10.42
Role of XRN2 ribonucleolytic activity in RNA metabolism 10.36
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites 10.33
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites (RNA-seq) 10.33
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells (Poly(I:C) and LPS) 10.32
Differential gene expression by suppression of either SOX2 or TP63 in KYSE70 human esophageal squamous carcinoma cell line. 10.3
Base-resolution mapping reveals distinct classes of N1-methyladenosine methylome in nuclear- and mitochondrial-encoded transcripts 10.18
Modeling and characterization of the dynamic gene regulatory networks underlying cancer drug resistance based on time-course RNA-seq data 10.13
DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure 10.03
Investigation into human Tra2 protein-dependent splicing in MDA-MB-231 cells using iCLIP and RNA-seq 9.99
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation 9.98
Global analysis of enhancer targets: Mosaic-seq 9.83
RNA Sequencing Reveals Immunosuppressive Role of Anthrax Lethal Toxin in Human Lung Epithelial and Monocytic Cells 9.8
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 9.69
Transcriptome analysis reveals malignant and hypoxic signature of glioblastoma 9.59
Short and Long RNA sequencing of human mature erythrocytes 9.43
Ribo_seq (aka ribosome profiling) analysis of control and Myc-induced U2OS cells 9.38
The m 6 A-methylase complex recruits TREX and regulates mRNA export. 9.37
RNA-Seq comparative analysis of human neuroblastoma cells before and after their confrontation to the embryonic microenvironment 9.34
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 9.27
RNA m5C Methylation in breast cancer using MeRIP-Seq 9.16
Genome-Wide Transcriptional Effects of the Anti-Cancer Agent Camptothecin 9.09
Molecular mechanism underlying increased ischemic damage in the ALDH2*2 genetic polymorphism using a human iPSC model system 9.0
Ribosomal footprinting of CN34-Parental and CN34-LM1a 8.87
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing 8.75
RNA-sequencing of human liver tissue 8.72
Reassessment of Exosome Composition 8.65
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 8.57
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells with PolyIC treatment 8.56
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 8.55
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages 8.54
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq) 8.54
Wide-scale analysis of alternative polyadenylation (APA) associated with proliferation and transformation using 3'-Seq 8.46
In vitro differentiation of human embryonic stem cells into ovarian follicle-like cells 8.46
Function of HNRNPC in breast cancer cells by controlling the dsRNA-induced interferon response 8.42
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 8.41
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 8.41
Ribosomal footprinting of MDA-Parental and MDA-LM2 8.4
Identification of miRNA signatures during the differentiation of hESCs into retinal pigment epithelial cells 8.26
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 8.24
Genetic regulation of human adipose microRNA expression and its consequences for metabolic traits 8.2
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 8.0
Next Generation Sequencing of isolated EGFR+ and HLA-G+ first trimester human trophoblasts 7.91
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 7.69
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 7.69
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) 7.67
Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient 7.59
DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats 7.58
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 7.56
Transcriptomic analyssis following EHMT1/2 inhibition 7.54
Transcriptomic but not genomic variability confers phenotype of breast cancer stem cells 7.51
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 7.38
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 7.38
The p30 isoform of CEBPA uncovers a silent enhancer to drive the expression of the tumor promotive factor CD73 in CEBPA mutant AML 7.25
Transcriptomic profiling of HeLa cells infected with Salmonella Typhimurium 7.21
STVI-120 Induction of differentiation in human epidermal stem cells followed by differential splicing analysis 7.04
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 6.96
Plasma cell mitochondrial pyruvate import controls the duration of humoral immunity. 6.91
Codon usage optimization in pluripotent embryonic stem cells [tRNA sequencing] 6.9
EIF1AX-A113 splice and RAS mutations cooperate to drive thyroid tumorigenesis through ATF4 and c-MYC 6.88
Ascorbate Suppresses VEGF Expression in Retinal Pigment Epithelial Cells 6.86
Resistance to BET inhibitor leads to new therapeutic vulnerabilities in castration resistant prostate cancer 6.82
The RNA-binding profile of Acinus, a peripheral component of the Exon junction complex, reveals its role in splicing regulation 6.7
Toxicogenomics of the flame retardant tris (2-butoxyethyl) phosphate in HepG2 cells using RNA-seq. 6.67
circRNA-sequencing 6.67
CD95/Fas ligand mRNA is toxic to cells 6.66
RNA helicase A is necessary for KIF1Bβ tumor suppression in neuroblastoma 6.65
Replication defective viral products exploit a cellular pro-survival mechanism to establish persistent infections 6.64
mRNA sequencing analysis of cultured human primary airway epithelial cells upon exposure to PMN exosomes 6.62
An RNA-centric dissection of host complexes controlling flavivirus infection 6.61
An RNA-centric dissection of host complexes controlling flavivirus infection [RNA-Seq] 6.61
Safeguarding nucleolar homeostasis by CBX4 alleviates senescence and osteoarthritis 6.56
Global transcriptional profiling changes upon knockdown of LKB1 in human glioblastoma cell lines 6.51
MicroRNA-mediated suppression of the TGF-β pathway confers transmissible and reversible CDK4/6 inhibitor resistance 6.51
MicroRNA-mediated suppression of the TGF-β pathway confers transmissible and reversible CDK4/6 inhibitor resistance (RNA-Seq) 6.51
Single-cell RNA-Seq Investigation of Foveal and Peripheral Expression in the Human Retina 6.5
Human Treg NaCl stimulation 6.5
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq] 6.47
An atlas of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2 6.44
Studying the selectivity of a targeted small molecule degrading a hypoxia-associated non-coding RNA 6.38
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq] 6.36
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification 6.36
Identification of miR-100 and miR-125b targets by AGO2 RIP-seq and RNA-seq after ectopic expression of miR-100 or miR-125b and evaluation of the TGFb expression signature in PANC-1 cells by RNA-seq 6.36
siRNA-mediated silencing of ORAI3 in MDA-MB-468 breast cancer cells exposed to hypoxia 6.29
Modeling Familial Cancer with iPSC Approaches 6.27
Identification of metabolically distinct adipocyte progenitor cells in human adipose tissues 6.25
TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. 6.25
Uridylation-mediated RNA quality control pathway in mammalian cytoplasm [RNA-Seq] 6.25
Allogeneic mature human dendritic cells generate superior alloreactive regulatory T cells in the presence of IL-15 6.24
T47D RNA-seq and ChrRNA-seq data 6.21
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 6.21
Transcriptome analysis of A549 cells expressing a SUMOylation-deficient TRIM28 mutant in the context of influenza A virus infection 6.17
EGFR Mutation Promotes Glioblastoma Through Epigenome and Transcription Factor Network Remodeling 6.17
RNA-Seq analysis and comparison of corneal epithelium in keratoconus and myopia patients 6.16
Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes 6.13
Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes (RNA-seq) 6.13
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [MB157_RNA-seq] 6.09
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer 6.04
Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins 6.03
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response 6.01
miR-93 Targets in Human Endothelial Cells 5.99
Acetyl-CoA carboxylase inhibition regulates microtubule dynamics and intracellular transport in cystic fibrosis epithelial cells 5.98
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 5.93
Identifying the molecular mode of action of itraconazole in colorectal cancer 5.92
High-throughput RNA sequencing on circular RNA profiles of human triple-negative breast cancer and adjacent normal tissues 5.88
Expression profiling of etoposide-induced senescent cells 5.85
METTL3 and WTAP 5.85
Next Generation Sequencing Facilitates Quantitative Analysis of HIV-1 Latency in Central Memory T Cells 5.84
RNA polymerase in pre-B-ALL cell lines 5.82
SLIGRL-induced gene expression changes in NHEK cells 5.81
Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy [RNA-Seq] 5.81
Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy 5.81
XBP1s Activation Globally Remodels N-Glycan Structure Distribution Patterns 5.77
Profiling in vivo Bone Lesion (IVBL) and Orthotopic tumors by Next Generation Sequencing 5.76
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation 5.75
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq) 5.75
RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 5.75
RNA-seq Profiles in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 5.75
Indoxyl sulfate stimulates angiogenesis by regulating reactive oxygen species production via CYP1B1 5.71
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [RNA-Seq1] 5.7
Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes—GMUCT 2.0 5.69
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] 5.68
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution 5.68
An in vitro human liver model by iPSC-derived parenchymal and non-parenchymal cells 5.67
p63 controls the enhancer landscape during keratinocyte differentiation 5.66
CROP-Seq in Primary Human T Cells 5.65
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 5.65
Disruption of the exocyst induces podocyte loss and dysfunction 5.63
hnRNP C is a key regulator of protein synthesis in mitosis 5.6
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits [mRNA-Seq] 5.5
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits 5.5
Peroxisome Proliferator-activated Receptor gamma- Deficiency in Endothelial Cells Impairs Angiogenic Capacity by Loss-of E2F1 Mediated Wnt Effector Genes 5.47
Wnt5a and its downstream transcription factor Stat3 are therapeutic targets for diffuse intrinsic pontine gliomas 5.42
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells 5.41
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells (longRNA-seq) 5.41
Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples 5.4
Large-scale profiling of intracellular signalling pathway activation reveals major distinctions between airway smooth muscle cells of asthmatics and non-asthmatics. 5.37
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples 5.33
Proliferation pause as an early blockade of human cellular reprogramming toward pluripotency [RNA-seq analysis] 5.32
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 5.32
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 5.28
Transcriptomic Profiling of Posterior Polymorphous Corneal Dystrophy 5.19
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 5.18
Human CD4+CD103+ cutaneous resident memory T cells are found in the circulation of healthy subjects 5.14
The role of PHF19 in promoting H3K27me3 deposition in multiple myeloma (RNA-Seq) 5.13
The role of PHF19 in promoting H3K27me3 deposition in multiple myeloma 5.13
RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program (RNA-Seq) 5.13
RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program 5.13
FUS mutant human motoneurons transcriptome analysis reveals altered pathways and impairment of microRNA function 5.12
Heterogeneous nuclear ribonucleoprotein C1/C2 links transcriptional and splicing actions of 1,25-dihydroxyvitamin D 5.11
Distinct regulation of alternative polyadenylation and gene expression by nuclear poly(A) polymerases 5.06
Human neutrophil genome during PMA- and E. coli encounter-induced activation 5.04
RNA-seq profiling of the human neutrophil genome during PMA- and E. coli encounter-induced activation 5.04
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 5.03
Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide 5.0
Transcriptome analysis of CNS leukemia 4.99
RNA-seq analysis of primary patient samples to characterize the CNS leukemia 4.99
oxLDL exposed trained monocytes 4.97
Transcriptomes of oxLDL exposed trained monocytes 4.97
circRNA-sequencing 4.97
Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation 4.96
Epidermal growth factor activates β-catenin via integrin-linked kinase to control proliferation of mesenchymal stromal cells. 4.94
Stem and effector CD8 T-cells from human cancers 4.94
RNA-seq of cultured human kidney peritubular microvascular endothelial cells following exposure to cyclosporine A 4.93
Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis 4.92
RAID allows multiplexed quantification of intracellular (phospho-)proteins and transcriptomes from fixed single cells 4.87
Gene expression profile of human placenta from T. Cruzi infected mothers 4.86
Global response to chemotherapy-induced apoptosis 4.83
The X-linked DDX3X RNA helicase dictates translation re-programming and metastasis in melanoma 4.81
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs [GRO-seq II] 4.78
mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress [human] 4.75
mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress 4.75
RNA-seq analysis of differentiating human erythroblasts 4.73
Pericyte-like cells generated from human pluripotent stem cells support hematopoietic stem and progenitors ex vivo 4.72
Determination of tRNA aminoacylation levels by high throughput sequencing 4.68
Systematic discovery of endogenous human ribonucleoprotein complexes 4.67
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (human 3' mRNA-seq) 4.64
Global hypomethylation mediated changes regulate constitutive PD-L1 expression in melanoma [RNA-Seq] 4.55
Global hypomethylation mediated changes regulate constitutive PD-L1 expression in melanoma 4.55
PolyA-sequencing in IMR-32 cells treated with THZ531 or DMSO 4.52
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes 4.49
Ex vivo Dynamics of Human Glioblastoma Cells in a Microvasculature-on-a-Chip System Correlates with Tumor Heterogeneity and Subtypes 4.48
Identification of transcription start sites for human A549 cell line using ReCappable-seq 4.47
Gene expression profiling study by RNA-seq in PDX model based diffuse type gastric cancers. 4.44
RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with pancreatic carcinoma 4.42
Transcriptomic responses to Ivacaftor and prediction of Ivacaftor clinical responsiveness 4.38
Potent antitumor activity of Cabozantinib, a c-MET and VEGFR2 Inhibitor, in a Colorectal Cancer Patient-derived Tumor Explant Model 4.34
A next generation sequencing based approach to identify extracellular vesicle mediated mRNA transfers between cells 4.34
Exogenous rescue of KLHL9 in SF210 cell line 4.31
Chemical Enhancement of Direct Cardiac Reprogramming In Vitro and In Vivo 4.31
The transcriptome and chromatin accessbility landscape of mammalian germline 4.29
RNA-seq Analysis of Castration-Resistant Prostate Cancer With Knock-down of E2F1 4.28
α Cell Function and Gene Expression Are Compromised in Type 1 Diabetes 4.24
Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [TMCC2] 4.21
4.2
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential 4.13
Comparing effects of perfusion and hydrostatic pressure on human chondrocytes using gene profiles 4.13
RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining 4.09
RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms, and GTPase binding in bipolar disorder 4.05
JQ1 +/- Vemurafenib in BRAF mutant melanoma (A375) 4.04
Targeting EZH2 in MYCN-amplified Neuroblastoma [RNA-seq] 4.03
Targeting EZH2 in MYCN-amplified Neuroblastoma 4.03
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells 4.03
Transcriptome landscape of HeLa response upon triamcinolone acetonide 4.03
Programmable RNA N6-methyladenosine editing by CRISPR-Cas9 conjugates 3.99
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq] 3.98
Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma 3.97
Functional interactions between Mi-2β and AP1 complexes control response and recovery from barrier disruption 3.97
Cell cycle dynamics of human pluripotent stem cells primed for differentiation 3.93
Transcriptional profiling of LS1034 cells treated with tepoxalin 3.91
HEK293 Heat-shock experiment 3.88
Efficient derivation of microglia-like cells from human pluripotent stem cells 3.87
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence [RNA-seq] 3.87
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence 3.87
mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs 3.86
Profiling of escape kinetics of viruses subjected to RNAi 3.83
RNA-seq of overgrown interscapular adipose tissue with biallelic MFN2 mutations 3.8
UBE3A-mediated regulation of imprinted genes and epigenome-wide marks in human neurons 3.79
Transcriptome analysis of kidney organoids 3.72
Measure transcript integrity using RNA-seq data 3.7
Loss of Function Mutations in ETS2 Repressor Factor (ERF) Reveal a Balance Between Positive and Negative ETS Factors Controlling Prostate Oncogenesis [22PC RNA-seq] 3.69
mRNA expression in human DAOY cells 3.67
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 3.65
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 3.65
Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients 3.63
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) of BJ cells treated with Nutlin-3a, an MDM2 inhibitor, which induces p53. 3.61
Specific labeling of stem cell activity in human colorectal organoids using an ASCL2-responsive minigene 3.6
Transcriptomics analysis of enteroendocrine cells following vertical sleeve gastrectomy 3.6
Transcriptomics analysis of human jejunal enteroendocrine cells after vertical sleeve gastrectomy 3.6
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells 3.59
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [RNA-seq] 3.59
Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells 3.57
Circular RNA profiling reveals the different distribution/characteristic and possible transport mechanism among the subcellular fractions 3.48
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics] 3.48
Global transcriptional changes in the JJN3 myeloma cell line that occur as a result of treatment with 2 pyrrolobenzodiazepine (PBD) monomers 3.47
The RNA helicase DDX39B regulates IL7R alternative splicing reducing the risk of Multiple Sclerosis 3.46
RNAseq of quiescent (Q) and stress induced premature senescent (SIPS) fibroblasts treated with plant extract (1201) from Solidago vigaurea subspecies alpestris 3.45
Agonistic targeting of TLR1/TLR2 induces p38 MAPK-dependent apoptosis and NfkB-dependent differentiation of AML cells 3.42
Gene expression signatures of innate lymphoid cells from human blood 3.35
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA 3.34
TRIM28-Regulated Transposon Repression Is Required for Human Germline Competency and Not Primed or Naive Human Pluripotency 3.29
Transcriptomic analysis of inter- and intra-patient variation in human iPSC cardiomyocytes: Platform for precision medicine to predict drug toxicity 3.28
Global analyses of the effect of different cellular contexts on microRNA targeting 3.24
Global analyses of the effect of different cellular contexts on microRNA targeting (RNA-Seq) 3.24
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 3.22
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 3.21
RNA-Seq of CD4+ T cells treated with AS1842856 or DMSO 3.2
RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways 3.18
MicroRNA Marker Based Prognostication of Oral Squamous Cell Carcinoma 3.17
Gene expression profile of differentially recognized Mtb-epitopes as a function of disease history 3.16
Transcriptome profiling of Cryptosporidium parvum infected lung and intestinal organoids 3.15
Inhibition of TAZ contributes radiation-induced senescence and growth arrest in glioma cells 3.12
Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma 3.11
Non-coding and coding transcriptional profiles are significantly altered in pediatric Retinoblastoma tumors 3.08
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 3.07
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 3.07
Illumina sequencing of vaginal epithelial cells from women using depot medroxyprogesterone acetate or non-hormonal contraception 3.06
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships 3.06
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) 3.06
Epigenetic reprogramming of melanoma cells by vitamin C treatment 3.04
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition 3.02
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] 3.02
The multiple myeloma risk allele at 5q15 lowers ELL2 expression and increases ribosomal gene expression [ELL2 KO] 2.95
Gene expression profiling of KSHV-infected periodontal ligament cells 2.94
Expression by CD133+ cells isolated from the adult human exocrine pancreas 2.9
Transcriptome analyses of human pancreatic islets and pseudoislets 2.9
Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity 2.87
NOTCH1 activation in breast cancer confers sensitivity to inhibition of SUMOylation 2.86
RNA-sequencing transcriptome profiling of normal human keratinocytes differentiation 2.81
Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24 2.76
O-glcnAc reprograms cellular energetics 2.73
Molecular characterization of gene regulatory networks in primary human tracheal and bronchial epithelial cells. 2.69
Contribution of SRF and Nkx2-5 to androgen-dependent gene expression in prostate cancer 2.68
The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions 2.67
A cell-permeable stapled peptide inhibitor of the estrogen receptor/coactivator interaction 2.65
Transcriptomic analysis of acute mitochondrial pyruvate carrier inhibition using UK5099 in ABL prostate cancer cells 2.59
Transcriptomes of human monocytes and monocyte-derived macrophages with or without glucocorticoid treatment 2.53
The dynamic landscape of coding and non-coding RNAs in the innate immune response to microbial pathogens 2.52
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets 2.47
Stage-specific regulation of the WNT/β-catenin pathway enhances differentiation of hESCs into hepatocytes 2.44
Immunological Imbalance in Fibrodysplasia Ossificans Progressiva Revealed by PBMC Transcriptome Analysis 2.43
RNA-sequencing of Wnt-dependent and Wnt-independent of Glioblastoma stem cell cultures 2.38
Subclonal cooperation drives metastasis through modulating local and systemic immune microenvironments 2.35
Thyroid State Regulates Gene Expression in Human Whole Blood Cells 2.35
Solid phase chemistry to covalently and reversibly capture thiolated RNA 2.34
Viral shRNA Knockdown of INS Promotor Activity in EndoC-βH1 Cells  2.33
4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells 2.33
Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA] 2.33
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer 2.3
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG functional reactivation [human cells RNA-seq] 2.29
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG 2.29
Identification of the RB loss-induced transcriptome and E2F1 cistrome in prostate cancer 2.29
Identification of the RB loss-induced transcriptome in prostate cancer [RNA] 2.29
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export 2.24
Patterned human microvascular grafts enable rapid vascularization and increase perfusion in infarcted hearts 2.22
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (TLR perturbation Bulk RNA-Seq) 2.2
Primate-specific gene TMEM14B promotes cortical expansion and folding 2.17
Transcriptional changes during naturally-acquired ZIKA Virus infection render dendritic cells highly conducive to viral replication 2.14
GATA3 enhances the neurogenic potential of primary human astrocytes after traumatic injury [exp2] 2.13
Diarrhoeal mechanisms of the Campylobacter jejuni enteritis 2.13
Zoledronic acid inhibits NFAT and IL-2 signaling pathways in regulatory T cells and diminishes their suppressive function in patients with metastatic cancer 2.13
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling (RNA-seq) 2.12
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling 2.12
Cutaneous Immunoprofile of Three Spotted Fever Group Rickettsiosis 2.11
Exploiting Prmt5-orchestrated intron detention signatures to treat splicing-addicted malignant glioma tumors 2.08
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 2.02
Rate of elongation by RNA polymerase II is influenced by specific gene features and histone modifications 2.0
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 2.0
Human iPSC-derived cells and microengineered Organ-Chip enhance neural development. 1.99
MRTF activates TEAD-YAP target gene expression 1.98
Expression data for hiPSC-derived RPE treated with 10mM Nicotinamide or vehicle 1.96
Induction of Cardiomyocyte Proliferation [pz-822_human] 1.96
Regulation of Cell Cycle to Stimulate Adult Cardiomyocyte Proliferation and Cardiac Regeneration 1.96
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 1.95
Profiling and bioinformatics analyses reveal differential expression of circular RNA in tongue cancer revealed by high-throughput sequencing 1.94
Longitudinal transcriptome profiling of post-treatment Lyme disease syndrome 1.89
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation 1.88
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT] 1.88
Sex differences in transcriptomic profiles in aged kidney cells of renin lineage 1.85
LncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression 1.84
ADAR1-editing in HeLa, p150-KO and ADAR1-KO transcriptomes 1.78
ADAR1-editing of cellular and measles virus-derived duplex RNA 1.78
Peripheral whole blood mRNAs and lncRNAs expression analysis in eosinophilic asthmatics 1.77
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 1.76
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 1.76
JAK/STAT inhibition in macrophages promotes therapeutic resistance by inducing expression of protumorigenic factors 1.73
Simultaneous profiling of sexually transmitted bacterial pathogens, microbiome, and concordant host response in cervical samples using whole transcriptome sequencing analysis 1.69
RNA-Sequencing approach for the identification of novel long non-coding RNA biomarkers in colorectal cancer 1.68
Human Tfh cell RNA bulk sequencing 1.68
Transcriptome analysis of peripheral blood monocytes 1.66
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing 1.65
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation I 1.64
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid 1.63
Effects of rFVIIIFc on human macrophages 1.63
Transcriptomic profile of intestinal epithelial cells obtained from ileal endoscopic biopsies from newly-diagnosed, pediatric Crohn's disease patients and healthy controls. 1.61
Global unleashing of transcription elongation waves in response to genotoxic stress restricts somatic mutation rate 1.6
RNA-sequencing of milk cells extracted from pre-partum secretions and longitudinally from mature human milk across the first year of lactation 1.6
Unbiased evaluation of cell-free amniotic fluid transcriptome of term and preterm infants to detect fetal maturity 1.51
Metastasis in triple-negative breast cancer 1.51
Functional and genomic characterization of a xenograft model system for the study of metastasis in triple-negative breast cancer. 1.51
Mutational landscape of splicing genes and functional consequences across 33 cancer types 1.48
Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity 1.47
The mRNA expression analysis of psoriasis skin lesion mesenchymal stem cell 1.41
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 1.41
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm 1.37
Functional separation of IL7Rα/KLRG1-defined CD8+ T cell populations in humans 1.32
Transposon-based construction of strand-specific RNA-seq libraries 1.32
single cell RNA-seq from GM12878 (ENCSR673UIY) 1.28
Transcriptional profiling of growing and senescent WT and IL-1R-depleted IMR90 cells 1.27
miCLIP, RNA-Seq, and Ribo-Seq in MOLM13 cells 1.27
Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes 1.26
Recovery and analysis of nascent RNA 1.22
The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains 1.22
SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression 1.21
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 1.21
The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas 1.2
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [SLAM-Seq] 1.2
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 1.12
Transcriptome-wide identification of transient RNA G-quadruplexes in human cells 1.08
Antiviral and anti-inflammatory properties of novel anti-HIV candidate ABX464 promotes specifics RNA splicing while preserving cellular RNA integrity. 1.07
The transcriptomic landscape of MAIT cell development in the thymus (C006 RNAseq data set) 1.06
Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 1.05
Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 1.05
Aging-associated patterns in the expression of human endogenous retroviruses 1.05
Aortic Valve Tissue: Stenosis vs. Sclerosis 1.04
Dissecting neural differentiation regulatory networks through epigenetic footprinting 0.97
Gene expression activation in CLL mediated by MSCs contact 0.97
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 0.97
RNA-Seq of SHEP TET21N cells upon Doxorubicin treatment 0.95
Tri-mannose grafting of chitosan nanocarriers remodels the macrophage response to bacterial infection 0.92
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression 0.91
Profiling of protrusion-enriched RNAs from human breast cancer cell line MDA-MB-231 0.91
PolyA-sequencing in Kelly and Kelly E9R neuroblastoma cells treated with THZ531 or DMSO 0.89
In search for materials able to be colonized by a normal endothelium: сharacterization and NGS gene expression profiling of human primary endotheliocytes cultivated on electrospun 3D matrices 0.86
HLA peptides derived from tumor antigens induced by inhibition of DNA methylation for development of drug-facilitated immunotherapy 0.85
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs 0.84
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 0.79
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) 0.79
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq] 0.79
Landscapes of gene translation in hepatocellular carcinoma tumors revealed by ribosome profiling 0.78
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells 0.72
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells [GRO-seq] 0.72
Pro-angiogenic Ginsenoside F1 and Rh1 Inhibit Vascular Leakage by Modulating NR4A1 0.72
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 0.71
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 0.71
Epigenetic activation and memory at a TGFB2 enhancer in systemic sclerosis 0.69
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 0.68
Human pulmonary artery endothelial cells (hPAECs) with downregulated BMPR2 signaling demonstrate a unique gene expression signature after exposure to overexpression of AdAlox5 0.66
In vitro modeling of human germ cell development using pluripotent stem cells 0.65
PLZF targets developmental enhancers for activation during osteogenic differentiation of human mesenchymal stem cells 0.65
PLZF targets developmental enhancers for activation during osteogenic differentiation of human mesenchymal stem cells (RNA-seq) 0.65
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy 0.64
Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis 0.62
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq) 0.59
IL-10 dysregulation in acute mountain sickness revealed by transcriptome analysis 0.57
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug 0.56
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human] 0.56
iPSCs Reveal Protective Modifiers of the BMPR2 mutation in Pulmonary Arterial Hypertension 0.54
Next generation sequencing of small RNAs isolated from exosomes in human semen 0.52
Wide-spread disruption of transcription termination in HSV-1 infection: Next-generation sequencing of translational activityd by ribosome profiling 0.51
Genome-wide expression analysis of human hTert immortalized fibroblasts after donwregulation of MCM7 0.45
High-throughput sequencing of PROMPT-enriched samples. 0.42
Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia 0.41
Human Treg IFNg/IL-10 subpopulations 0.35
Gene expression analysis of human adenomas. 0.34
mRNA sequencing of the mouse and human Hep-Orgs, Chol-Orgs and primary hepatocytes 0.3
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) in proliferation, quiescence, senescence and transformed states. 0.3
Transcriptomic profiling of human peripheral blood-derived mast cells 0.26
Genome-wide analyses of chromatin state in human mast cells reveal molecular drivers and mediators of allergic and inflammatory diseases 0.26
Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer 0.26
RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with colorectal carcinoma 0.24
Expression of the mannose receptor (CD206) defines distinct populations of human colonic macrophages in health and inflammatory bowel disease 0.24
Single-cell analysis of human kidney organoids 0.22
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.22
Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes 0.21
RNA-sequencing analysis of 5' capped RNAs identifies novel differentially expressed genes in sessile serrated colon polyps (SSPs) 0.21
High-resolution comparative analysis of great ape genomes 0.2
Alterations of the MEK/ERK, BMP, and Wnt/b-catenin pathways detected in the blood of individuals with lymphatic malformations 0.19
RNA-seq of primary patient AML samples 0.19
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 0.17
The role of m6A/m-RNA methylation in stress response regulation 0.1
m6A/m-Seq of human B-lymphocyte cell lines from healthy controls and major depressive disorder patients 0.1
Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors 0.1
LHX9 rescues KRAS suppression through transcriptional regulation of YAP1 [RNA-Seq] 0.07
LHX9 rescues KRAS suppression through transcriptional regulation of YAP1 0.07
Metabolism as an early predictor of DPSCs aging 0.05
Human Pancreatic Islets Expressing HNF1A Variant Have Defective β cell Transcriptional Regulatory Networks 0.04
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_Stability] 0.04
Transcriptome analysis of human immortilized astrocytes reprogrammed into dopaminergic neurons 0.04
Transcriptional landscape changes during human embryonic stem cell derivation 0.03
Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS] 0.02
Differences in miRNA Detection Levels are Technology and Sequence Dependent 0.02
Targets mediated microRNA arm-imbalance promotes gastric cancer progression [lncRNA] 0.02
Targeting Spt5-Pol II small-molecule inhibitors uncouple distinct activities and reveal additional regulatory roles 0.01


Contact Us

For scientific and technical queries contact Butte Lab @UCSF


Cite GENEVA Tool

Manuscript in Preparation