Gene Query: GAPVD1

Dataset Description Geneva Score
Distinct regulation of alternative polyadenylation and gene expression by nuclear poly(A) polymerases 26.16
Distinct epigenomes in CD4+ T cells of newborns, middle-ages and centenarians. 21.35
Genes significantly down or Up-regulated upon RNF219 knockdown 20.03
Overexpression of UGT2B17 in MEC1 and JVM2 leukemia cell lines 17.45
Nm-seq finds thousands of modified 2’-O-methylation sites in mRNA with base precision 16.9
RNA-seq data corresponding to: AZD4573 is a highly selective CDK9 inhibitor that suppresses Mcl-1 and induces apoptosis in hematological cancer cells 16.65
Montelukast counteracts the influenza virus-induced block in unfolded protein stress response and reduces virus multiplication 16.45
Overexpression of ERG in cord blood progenitors promotes expansion and recapitulates molecular signatures of high ERG leukemias 15.65
Presence of NAD+-capped RNA in human cells: function and removal by the DXO deNADing Protein 15.54
Post-transcriptional manipulation of TERC reverses molecular hallmarks of telomere disease 14.8
Expression analysis of primary human monocytes stimulated with an anti-TLR10 mAb (5C2C5) 14.6
Global transcriptional profiling changes upon knockdown of G9a in human non-small cell lung cancer cells 14.54
Opposing Effects of Cyclooxygenase-2 (COX-2) on Estrogen Receptor β (ERβ) Response to 5α-reductase Inhibition in Prostate Epithelial Cells 14.42
Hierarchy of mono- and bi-allelic TP53 alterations in Multiple Myeloma cell fitness 14.29
The stress granule transcriptome reveals principles of mRNA accumulation in stress granules. 13.7
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator [RNA-seq] 13.6
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator 13.6
Ribosomal footprinting of MDA-Parental and MDA-LM2 13.36
FMRP facilitates the nuclear export of N6-methyladenosine-containing mRNAs 12.97
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia 12.57
H3K27Ac in MCF7 Y537S ER mutant cells and RNAseq with and without treatment with THZ1 12.44
Ribosomal footprinting of CN34-Parental and CN34-LM1a 12.15
HITS-CLIP analysis uncovers a link between the Kaposi's sarcoma associated herpesvirus ORF57 protein and host pre-mRNA metabolism 12.02
CD95/Fas ligand mRNA is toxic to cells 12.02
Identification of the networks that regulate human monocytic myeloid-derived suppressor cell differentiation into inflammatory macrophages 11.56
Transcriptomic analyssis following EHMT1/2 inhibition 11.14
Impact of ETV7 activity on interferon-stimulated gene expression in 293T cells treated with interferon alpha 11.12
ETV7 and interferon response 11.12
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression 11.04
Sex differences in transcriptomic profiles in aged kidney cells of renin lineage 10.89
R430: A potent inbibitor of DNA and RNA viruses 10.82
Subclonal cooperation drives metastasis through modulating local and systemic immune microenvironments 10.78
Nucleosome dynamics in human colorectal cancer specimens reveal activation of a CNOT3-regulated pathway of embryonic stem cell self-renewal 10.72
Gene expression profile of HGC27 gastric cancer cell p53 KO and KD 10.58
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines 10.5
Poly(A)-ClickSeq resolves CF25-mediated alternative poly-adenylation, HeLa 10.48
Global transcriptional changes in the JJN3 myeloma cell line that occur as a result of treatment with 2 pyrrolobenzodiazepine (PBD) monomers 10.45
High-throughput sequencing of PROMPT-enriched samples. 10.38
Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells 10.33
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA 10.26
HEXIM1 is induced by DHODH inhibition to suppress melanoma 10.2
HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq] 10.2
RIG-I and MDA5 fRIP during KSHV lytic reactivation 10.15
Impact of dieldrin on transcription in Jurkat T cells 10.07
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes 10.07
Quantitative Analysis of negative control and overexpression-TRIB1 in PC3 and DU145 Transcriptomes 9.95
Effect of 48h treatment with 100nM GSK2879552 on T-ALL cell lines LOUCY and PEER 9.88
Genistein and bisphenol A exposure cause estrogen receptor 1 to bind thousands of binding sites in a cell type-specific manner 9.84
LINC00520 is Induced by Src, STAT3, and PI3K and Plays a Functional Role in Breast Cancer 9.75
SUV420H2 knockdown in PANC-1 9.71
RNA sequencing of mechanically strained NHEKs and control NHEKs 9.59
Genome-wide expression change by SHARPIN knockdown in MCF-7 cells 9.41
Global transcriptional profiling changes upon knockout of USP22 in human Non-small cell lung cancer cells 9.3
3’ Uridylation Expands miRNA Target Repertoire 9.19
Evolved Labels of Placental Invasion in Human and Bovine Endometrial Stroma 9.15
Human Adipocytes Regulate Gene Expression in Triple-negative Breast Cancer Assessed by NGS Sequencing 9.11
Model systems of DUX4 expression recapitulate the transcriptional profile of FSHD cells 9.11
Group A Streptococcus M1T1 Intracellular Infection of Primary Tonsil Epithelial Cells Dampens Levels of Secreted IL-8 Through the Action of SpyCEP 9.1
Expression data for KDM1B knockdown in Glioma-Initiating Cells (GICs) 8.97
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) 8.96
The hepatitis C viral protein NS5A stabilizes growth-regulatory human transcripts 8.94
RNA sequencing of HepG2 cells treated with estradiol or estrogen receptor agonist 8.92
ARID2 promotes clear cell renal cell carcinoma in the absence of functional PBRM1 [RNA-seq] 8.86
ARID2 promotes clear cell renal cell carcinoma in the absence of functional PBRM1 8.86
Effects of NSUN2 deficiency on the mRNA 5-methylcytosine modification and gene expression profile in HEK293 cells (RNA-Seq) 8.86
Cyclophosphamide (CTX) Enhances Cancer Antibody Immunotherapy in the Resistant Bone Marrow Niche by Modulating Macrophage FcγR Expression 8.8
Base-resolution mapping reveals distinct classes of N1-methyladenosine methylome in nuclear- and mitochondrial-encoded transcripts 8.8
Thymine DNA Glycosylase as a novel target for melanoma: effect of TDG silencing on gene expression in SK-mel-28 melanoma cells 8.72
Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [RNA-seq] 8.69
Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development 8.69
EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression 8.54
EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression [RNA-seq] 8.54
EIF1AX-A113 splice and RAS mutations cooperate to drive thyroid tumorigenesis through ATF4 and c-MYC 8.49
Transcriptomic profiling of normal human cardiac fibroblast treated with halofuginone 8.44
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 8.43
ERK potentiates transactivation and oncogenic function of ERG by phosphorylation induced dissociation of PRC2 complex 8.41
Control of human hemoglobin switching by LIN28B-mediated regulation of BCL11A translation 8.41
SAM68 is required for regulation of Pumilio by the NORAD long noncoding RNA 8.31
Transcriptome analysis of A549 cells expressing a SUMOylation-deficient TRIM28 mutant in the context of influenza A virus infection 8.31
Analysis and expansion of the eosinophilic esophagitis transcriptome by RNA sequencing 8.25
ENPP1 Mutation Causes Recessive Cole Disease by Altering Melanogenesis 8.24
Effects of Belinostat and Dexamethasone treatment of A549 gene expression 8.21
Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid  during virologically suppressed HIV 8.12
Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on HepG2) 8.11
Expression analysis of genes modulated after knock-down of lncRNA CHROME. 8.1
MDM2 and MDM4 are Therapeutic Vulnerabilities in Malignant Rhabdoid Tumors 8.01
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 7.99
Transcriptomic profiles of human foreskin fibroblast cells in response to orf virus 7.94
Survival of pancreatic cancer cells lacking KRAS function 7.94
Cell differentiation grade determines distinct FOXA2 contributions to the cis-regulatory networks of pancreatic cancer cells [RNA-seq] 7.9
Cell differentiation grade determines distinct FOXA2 contributions to the cis-regulatory networks of pancreatic cancer cells 7.9
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [ZNF787] 7.9
Cellular acidosis triggers MondoA transcriptional activity by driving mitochondrial ATP production 7.89
Transcriptome profiling of microRNA-mediated neuronal reprogramming with REST repression at day 7 7.85
MYC dependent mRNA translation shapes gene expression and cell biology 7.84
Mutational landscape of splicing genes and functional consequences across 33 cancer types 7.84
Insulin receptor associates with promoters genome-wide and regulates gene expression [RNA-seq 2] 7.78
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq) 7.75
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages 7.75
NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation 7.71
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 7.71
DUX4-induced histone variants H3.X and H3.Y mark DUX4 target genes for expression 7.67
DUX4-induced histone variants H3.X and H3.Y mark DUX4 target genes for expression (RNA-seq) 7.67
Inherent DNA binding specificities of the HIF-1α and HIF-2α transcription factors in chromatin 7.63
Inherent DNA binding specificities of the HIF-1α and HIF-2α transcription factors in chromatin (RNA-seq) 7.63
MLL-AF4 binds directly to a BCL-2 specific enhancer and impacts H3K27 acetylation 7.51
MicroRNA targetome analysis during HCMV infection 7.5
RNA-seq of tumor cells following angiopellosis extravasation 7.47
Gene expression changes upon drug withdrawal (A375/451Lu cell lines) 7.47
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression 7.45
Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs 7.42
UBE3A-mediated regulation of imprinted genes and epigenome-wide marks in human neurons 7.41
Genome-wide analysis of herpes simplex virus type 1 (HSV-1) infected cells 7.39
Transcriptome analysis of U87 cells upon LINC00152 knockdown 7.33
Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes 7.29
Understanding the Mechanistic Contribution of Herbal Extracts in Compound Kushen Injection with Transcriptome Analysis 7.27
A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module 7.24
Genome-wide transcriptional profiling of YAP target genes in human endothelial cells 7.21
Energy Metabolism during Anchorage-Independence 7.21
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HET] 7.16
Systematic discovery of endogenous human ribonucleoprotein complexes 7.12
Selective suppression of endothelial cytokine production by progesterone receptor [RNA-seq] 7.12
Selective suppression of endothelial cytokine production by progesterone receptor 7.12
Role of microRNAs in the interaction between Salmonella and the host cell 7.09
The LINC01138 Drives Malignancies via Activating Arginine Methyltransferase 5 in Hepatocellular Carcinoma 7.05
Disruption of the exocyst induces podocyte loss and dysfunction 7.04
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 7.03
G-quadruplex structures mark human regulatory chromatin 7.03
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [MB157_RNA-seq] 7.0
The Molecular Dissection of the Oncogenic Role of ETS1 in the Mesenchymal Subtypes of Head and Neck Squamous Cell Carcinoma [RNA-seq knock-down] 6.96
High-throughput RNA sequencing on circular RNA profiles of human bladder cancer tissues and normal bladder tissues 6.96
NKX2.2 6.94
RNA-Seq analysis of NKX2.2 knockdown in human pancreatic islets 6.94
Transcriptomic Reprogramming of Prostate Cancer Cells Driven by Stroma-Derived AREG 6.88
An RNA-centric dissection of host complexes controlling flavivirus infection [RNA-Seq] 6.86
An RNA-centric dissection of host complexes controlling flavivirus infection 6.86
Global Mapping of Human RNA-RNA Interactions 6.82
Huntingtin aggregation impairs autophagy leading to Argonaute-2 accumulation and global microRNA dysregulation 6.82
RNA transcriptome analysis during HSV-1 infection 6.82
IgG immunocomplexes sensitize human monocytes for inflammatory hyperactivity via transcriptomic and epigenetic reprogramming in Rheumatoid Arthritis 6.78
Human cell line and subcutaneous tumor 6.71
Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 6.68
Molecular Hallmarks of Experimentally Acquired Immunity to Malaria [Pilot Study] 6.65
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma 6.63
Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy 6.63
Capturing the Interactome of Newly Transcribed RNA 6.6
Capturing the Interactome of Newly Transcribed RNA (RICK) 6.6
Dynamic epigenetic remodeling underlies microRNA-mediated transdifferentiation of human adult fibroblasts into neuronal subtypes 6.55
Epigenetic siRNA and chemical screens identify SETD8 inhibition as a new therapeutic strategy of p53 reactivation in high-risk Neuroblastoma. 6.54
Transcriptome Analysis of CircMRPS35 mediated mRNA expression profiles 6.53
Gene-Centric Functional Dissection of Human Genetic Variation Uncovers Regulators of Hematopoiesis 6.5
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 6.43
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 6.43
The ARID1A tumor suppressor controls global transcription via pausing of RNA Polymerase II 6.42
Isolation and Transcriptome Analyses of Human Erythroid Progenitors: BFU-E and CFU-E 6.42
PAK4 suppresses RELB to prevent senescence-like growth arrest in breast cancer 6.34
Identification of transcripts altered upon LIN-41 knockdown in human embryonic stem cells 6.3
Proteotranscriptomic profiling of potential E6AP targets in prostate cancer cells 6.29
Searching for target genes of miR-508/509/506/514 in HCT116 cells 6.28
Differential expression of genes in HCMV-infected fibroblasts regulated by the purinergic receptor P2Y2. 6.27
RNASeq of MV4;11 cells transduced with scramble shRNA or BRD4 shRNA in combination with DMSO or SGC0946 6.22
circ-ZNF609 regulates G1-S progression in Rhabdomyosarcoma 6.15
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex (RNA-Seq I) 6.13
Mitochondrial dsRNA triggers antiviral signalling in humans 6.11
RNA-seq Profiles in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 6.11
RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 6.11
Generation and persistence of human tissue-resident memory T cells in lung transplantation 6.1
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 6.06
RNA transcriptome sequencing analysis of SGC-7901 cells transfected with tcons_00001221 shRNA or control shRNA 6.0
Small-molecule targeting of brachyury transcription factor addiction in chordoma [rnaseq_compound] 5.99
ROR-γ drives androgen-receptor expression and represents a therapeutic target in castration-resistant prostate cancer 5.97
Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient 5.97
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_human] 5.92
Multiple roles for Grainyheadlike transcription factors in the establishment and maintenance of human mucociliary airway epithelium 5.87
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion 5.86
RNA-seq in neutrophils from Juvenile Idiopathic Arthritis 5.85
Isolation and sequencing of AGO-bound RNAs reveals characteristics of stem-loop processing in vivo 5.84
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection (RNA-sequencing) 5.81
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection 5.81
AZ1366: An inhibitor of tankyrase and the canonical Wnt pathway that limits the persistence of non-small cell lung cancer cells following EGFR inhibition 5.8
TGF-β regulation of miRNA expression in pancreatic cancer 5.77
Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells 5.75
XPO1 inhibition antagonizes MCL via nuclear retention of IkB: Selinexor demonstrates antitumor activities in both ibr-sensitive and ibr-resistant tumor cells 5.74
An alternative CTCF isoform antagonizes canonical CTCF occupancy and changes chromatin architecture to promote apoptosis 5.71
Identification of Atrial Fibrillation associated genes and functional non-coding variants 5.66
DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure 5.59
The cohesin release factor WAPL restricts chromatin loop extension. 5.58
The cohesin release factor WAPL restricts chromatin loop extension. [RNA-Seq] 5.58
UBC9 knockdown in bladder cancer T24 cell lines 5.51
CD74 role in transcription regulation [RNA-seq] 5.47
CD74 role in transcription regulation 5.47
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 5.38
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 5.38
5.32
RNA sequencing of erythroid and granulomonocytic colonies differentiated from transduced bone marrow CD34+ cells expressing U2AF1 S34F mutation, U2AF1 wild-type or empty vector control 5.24
Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases 5.23
Transcriptomic profiling of human CD34+ derived mast cells [RNA-Seq] 5.23
Antibody-Mediated Inhibition of MICA/B Shedding Promotes NK Cell-Driven Tumor Immunity 5.22
Convergent roles of ATF3 and CSL in chromatin control of CAF activation 5.16
Convergent roles of ATF3 and CSL in chromatin control of CAF activation [RNA-seq] 5.16
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit 5.12
Sensing self and nonself circular RNAs 5.11
Mechanistic Model-Guided Study of Embryonic Morphogenesis 5.05
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner 5.05
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner [Huh-7] 5.05
RNA-seq Analysis of Castration-Resistant Prostate Cancer With Knock-down of E2F1 5.04
Chemical Enhancement of Direct Cardiac Reprogramming In Vitro and In Vivo 5.02
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 5.02
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 5.02
Whole-transcriptome profilings between a pair of HCA7-derived KRAS-wildtype cetuximab sensitive and resistant colon cancer cells from 3D culture 5.01
polyA RNA Sequencing Analysis of HTR-8/SVneo cells after lnc-SLC4A1-1 overexpression 4.99
RNA-seq of cultured human kidney peritubular microvascular endothelial cells following exposure to cyclosporine A 4.99
Comparing oestrogen-responsive genes in endometrial and breast cancer cell lines 4.97
METTL3 and WTAP 4.95
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells with PolyIC treatment 4.95
Functional Screening in Human Cardiac Organoids Reveals a Metabolic Mechanism for Cardiomyocyte Maturation 4.95
RNAseq of quiescent (Q) and stress induced premature senescent (SIPS) fibroblasts treated with plant extract (1201) from Solidago vigaurea subspecies alpestris 4.91
High-throughput RNA sequencing on circular RNA profiles of human pancreatic cancer cell lines and gemcitabine resistant pancreatic cancer cell lines. 4.9
Differential expression of pancreatic cancer PANC1 cells treated with pilocarpine 4.89
RNA-seq of RKO cells with cTAZ KO or putback 4.88
Effect of PBK knockdown on C4-2 cell transcriptome 4.87
RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with colorectal carcinoma 4.86
Cooperation of GRSF1 and the mitochondrial degradosome (hSuv3-PNPase complex) in degradation of mitochondrial RNA 4.85
BRD9 defines a novel SWI/SNF sub-complex and constitutes a specific vulnerability in malignant rhabdoid tumors 4.81
Oncogenic changes and EMT in normal human bile duct epithelial cells are caused by parasite-derived materials and N-nitrosodimethylamine 4.8
Modulation of SF3B1 causes global intron retention and downregulation of the B-cell receptor pathway in chronic lymphocytic leukemia 4.79
RNA sequencing (RNA-SEQ) of Human endothelial cells (HUVEC) in LFS, sFRP2OE, and WT conditioned media 4.76
RNAseq to determine gene expression changes following depletion of SETDB1 in THP-1 AML Cells 4.75
DAOY-Notch1/Notch2 knockout: transcriptome comparison 4.75
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 4.74
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos 4.72
Expression data for HT29 cells treated with 5-aza-deoxy-cytidine [RNA-Seq] 4.7
Expression data for HT29 cells treated with 5-aza-deoxy-cytidine 4.7
Selectively targeting bromodomain and extraterminal proteins for degradation as a novel anti-glioblastoma strategy [RNA-seq] 4.69
Whole-Transcriptome Profiling of Canine and Human in Vitro Models Exposed to a G-Quadruplex Binding Small Molecule 4.67
Next Generation Sequencing Facilitates Quantitative Analysis of colorectal cancer cells transfected with NC siRNA or RPL9 siRNA 4.64
The ribonuclease activity of SAMHD1 is required for HIV-1 restriction 4.62
Transcriptome profiling of H1-iCas9 cells grown on laminin and on MEFs 4.59
Epigenome Editing by a CRISPR/Cas9-Based Acetyltransferase Activates Genes from Promoters and Enhancers 4.57
Cap-specific terminal N6-methylation of RNA by an RNA polymerase II-associated methyltransferase. 4.54
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes 4.5
A transcriptome dataset revealing the molecular features of breast cancer stem cells 4.45
RC3H1 posttranscriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-kB pathway [RNA-Seq] 4.45
RC3H1 posttranscriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-kB pathway 4.45
Human SETMAR is a DNA sequence-specific histone-methylase with a broad effect on the transcriptome 4.4
Antibiotics induce polarization of pleural macrophages to M2-like phenotype in patients with tuberculous pleuritis 4.37
RNA-Seq of polysome profiling fractions and whole cell lysates of UVB-irradiated N-TERT keratinocytes 4.36
Distinct gene expression profile of Huh7 cell lines stably overexpressing CRABP1 or 2 4.29
Clinical and genomic crosstalk between glucocorticoid receptor and estrogen receptor α in endometrial cancer 4.28
Clinical and genomic crosstalk between glucocorticoid receptor and estrogen receptor α in endometrial cancer [RNA-seq] 4.28
Integrin αvβ3 acting as membrane receptor for thyroid hormones mediates angiogenesis in malignant T cells 4.27
Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes 4.27
Differentially Expressed Genes upon Knockdown of ZRANB1 or EZH2 in LM2 Cells 4.27
Effect of CRISPR-Cas9 mediated knock-out of integrin alpha2 on the transcriptome of DU145 prostate cancer cell grown as a spheroid culture 4.24
Plasma cell mitochondrial pyruvate import controls the duration of humoral immunity. 4.24
Modulation of gene transcription and epigenetics of colon carcinoma cells by bacterial membrane vesicles 4.15
A combinatorial screen of the CLOUD uncovers a synergy targeting the androgen receptor 4.14
Genetic-to-epigenetic Therapy for Pancreatic Cancer 4.11
Differential mRNA expression upon 9p21 deletion in HEK TE single-cell derived clones 4.09
Loss of 9p21 regulatory hub promotes kidney cancer progression by upregulating HOXB13 4.09
Comprehensive comparative analysis of 5’ end RNA sequencing methods 4.08
Evolving Spindlin1 Small Molecule Inhibitors Using Protein Microarrays 4.08
Aneuploidy triggers an immune response 4.07
Gene expression in GBM with Cav3.2 inhibition 4.03
Adenovirus Small E1A Employs the Lysine Acetylases p300/CBP and Tumor Suppressor Rb to Repress Select Host Genes and Promote Productive Virus Infection [RNA-seq] 4.03
Adenovirus Small E1A Employs the Lysine Acetylases p300/CBP and Tumor Suppressor Rb to Repress Select Host Genes and Promote Productive Virus Infection 4.03
RNA Sequencing of Human iPS derived Cardiomyocytes 3.94
Chromatin remodeling mediated by ARID1A is indispensable for normal hematopoiesis in mice (human RNA-Seq) 3.87
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 3.87
Rational targeting of RNA structure in SMN2 transcripts reverses Spinal Muscular Atrophy molecular phenotypes 3.78
Widespread backtracking by RNA pol II is a major effector of gene activation, 5’ pause release, termination and transcription elongation rate 3.76
Identification of renal resident macrophages across species [C1] 3.73
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells 3.72
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 3.72
MYCL and EP400 are required for Max and MCPyV mediated gene activation 3.72
CXCR4 is a host factor that regulates Plasmodium development in hepatocytes 3.72
Toxoplasma gondii infection of human retinal pigment epithelial cells 3.7
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 3.68
Gene expression in skeletal muscle in older individuals subject to ten days of complete bed rest. 3.63
CD73 knockdown effect in pancreatic cancer cell lines 3.63
RNA-seq analysis of control and Myc-induced U2OS cells 3.63
Identification of microRNA-668 and microRNA-489 targets by RISC immunoprecipitation 3.6
Functional and genomic characterization of a xenograft model system for the study of metastasis in triple-negative breast cancer. 3.58
Metastasis in triple-negative breast cancer 3.58
The dynamic landscape of coding and non-coding RNAs in the innate immune response to microbial pathogens 3.53
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells (longRNA-seq) 3.53
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells 3.53
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 3.53
STX4 Over-Expression in Human islets 3.47
RNA sequence of mRNA in HUVEC cells after depleting EGFL6 3.47
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 3.43
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [RNA-Seq2] 3.4
Cellular gene expression during Hepatitis C Virus replication revealed by Ribosome profiling 3.38
Transcriptomic analysis of the HOTAIR-regulated genes 3.37
N6-methyladenosine mRNA marking promotes selective translation of regulons required for human erythropoiesis[Ribosome Profiling] 3.37
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 2] 3.35
The immediate impact of exoribonucleolysis on nuclear RNA processing, turnover and transcriptional control revealed by rapid depletion of DIS3, EXOSC10 or XRN2 from human cells 3.34
Highly-motile versus unsorted MDA-MB-231 breast cancer cells 3.33
NSD2 overexpression links drives clustered chromatin and transcriptional changes in a subset of insulated domains of insulated domains 3.31
Effects on gene expression of doxorubicin in human stem cells-derived cardiomyocytes 3.3
A monocyte gene expression signature in the early clinical course of Parkinson’s disease 3.3
K562 polyA RNA-Seq 3.25
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction [III] 3.25
NF-κB p65 dimerization and DNA-binding is important for inflammatory gene expression 3.22
hnRNP C is a key regulator of protein synthesis in mitosis 3.2
Transcriptional regulation of autophagy-lysosomal function in BRAF-driven melanoma progression and chemoresistance 3.14
Role of COP1 on MAP kinase transcriptional output in gastrointestinal stromal tumor 3.14
DHX36 resolves G-rich structures in mRNA untranslated region to allow their translation 3.12
mTORC1 balances cellular amino acid supply with demand for protein synthesis through post-transcriptional control of ATF4 3.03
Comparative gene expression profiling of MHH-CALL4 cells subject to pharmacological JAK2 inhibitor treatment (ruxolitinib or CHZ868) or shRNA-mediated JAK2 depletion in vitro 3.03
JAK2 is dispensable for maintenance of JAK2 mutant B-cell acute lymphoblastic leukemias 3.03
Transcriptome landscape of HeLa response upon triamcinolone acetonide 2.98
Transcriptome analysis of peripheral blood monocytes 2.98
RNAseq of cell lines with knocked in ESR1 mutations 2.97
BBBomics - Human Blood Brain Barrier Transcriptomics Hub 2.96
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] 2.96
Silencing SPIB in attached and floating state of H1703 lung cancer cells 2.94
Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. Tested on 5 concentrations. 2.89
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 2.89
Subcellular RNA fractions of HSV-1 infected primary human fibroblasts 2.88
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 2.83
Suppression of the FOXM1 transcriptional program via novel small molecule inhibition 2.82
Genome-wide expression analysis of human hTert immortalized fibroblasts after donwregulation of MCM7 2.82
Noncoding regions are the main source of targetable tumor-specific antigens 2.8
Programmable RNA N6-methyladenosine editing by CRISPR-Cas9 conjugates 2.79
Effect of drugs on transcriptomic profiles 2.77
Profiling of lung tumor-infiltrating CD8 T cells according to their expression status of CD39 2.74
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing 2.72
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 2.7
RNA sequencing of human pancreatic cancer cell lines 2.68
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 2.64
The transcriptome effect of overexpressing EZH2 in MCF7 2.55
Newly defined ABCB5+ dermal mesenchymal stem cells promote healing of chronic iron overload wounds via secretion of interleukin-1 receptor antagonist 2.54
MEK inhibition rewires enhancer landscapes in RAS-driven Rhabdomyosarcoma to unlock a myogenic differentation block 2.49
Epigenetic Reprogramming of mutant RAS-driven Rhabdomyosarcoma via MEK Inhibition 2.49
Long non-coding RNA TYKRIL controls pericyte function and survival in the cardiovascular and central nervous system through regulation of p53 activity and PDGFRß expression 2.48
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) 2.48
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships 2.48
m6A-RNA mapping, SND1-RNA binding profile mapping and SND1-depletion in KSHV-infected B-lymphocytes 2.45
Transcriptome profile of HepG2-expressing ATP7B-H1069Q (liver hepatocellular cells) exposed to JNK or p38 Inhibitor 2.43
mRNA expression profile of Lymphocytes by high-throuput sequencing 2.37
Effect of Polybrominated diphenyl ethers (PBDEs) on gene expression of MCF7 cells 2.34
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation 2.32
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture 2.32
Transcriptomic profiling of human peripheral blood-derived mast cells 2.31
Genome-wide analyses of chromatin state in human mast cells reveal molecular drivers and mediators of allergic and inflammatory diseases 2.31
The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling 2.3
The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling [RNA-seq] 2.3
Human Treg IFNg/IL-10 subpopulations 2.28
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates 2.25
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates [RNA-seq] 2.25
Arrayed molecular barcoding identifies TNFSF13 as a positive regulator of acute myeloid leukemia-initiating cells 2.24
4sUDRB-seq: measuring transcription elongation and initiation genomewide 2.24
Nuclear import of the DSCAM-cytoplasmic domain drives signaling capable of inhibiting synapse formation 2.18
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] 2.15
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 2.15
Small-molecule targeting of brachyury transcription factor addiction in chordoma 2.15
CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles (RNA-seq) 2.14
CX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles 2.14
The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions 2.13
HBEC-shp53-PCHD7 2.11
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis [RNA-seq] 2.11
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis 2.11
The DPYSL2 gene connects mTOR and schizophrenia 2.1
Combined use of astragalus polysaccharide and berberine attenuates insulin resistance in IR-HepG2 cells via regulation of the gluconeogenesis signaling pathway 2.1
Identification of renal resident macrophages across species 2.09
HMGA1 and FOXM1 synergistically regulate a common gene network modulating angiogenesis in breast cancer 2.05
Effect of BCL11B knockdown on transcriptome of human T-cell precursors 2.04
Effect of BCL11B overexpression on transcriptome of T-cell acute lymphoblastic leukemia (T-ALL) cells 2.02
Copper Regulation of HIF-1 Transcription Activity 1.95
Copper Regulation of HIF-1 Transcription Activity [RNA-seq] 1.95
miR-126 Orchestrates an Oncogenic Program in B-Cell Precursor Acute Lymphoblastic Leukemia 1.94
Transcriptome of Primitive Human Hematopoietic Cells: A New Resource to Find hHSC-Specific Genes 1.89
Impact on erythroid progenitor type on erythroid differntiation 1.88
Impact of Escherichia coli K12 and O18 on human platelets: effects on platelet activation, spliced platelet RNAs and proteins 1.87
miCLIP, RNA-Seq, and Ribo-Seq in MOLM13 cells 1.83
TCF21 and Aryl-hydrocarbon receptor gene cooperate to activate a pro-atherosclerotic gene expression program 1.83
Defective structural RNA processing in relapsing-remitting multiple sclerosis 1.8
Identification of a LIF-responsive replication-competent human β cell 1.8
An siRNA screen identifies CHD4 as a target for epigenetic therapy 1.79
mRNA expression in human DAOY cells 1.77
α Cell Function and Gene Expression Are Compromised in Type 1 Diabetes 1.77
TrapSeq: An RNA Sequencing-based pipeline for the identification of genetrap insertions in mammalian cells 1.77
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells 1.71
Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course 1.7
Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains 1.7
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 1.67
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] 1.66
Structure and degradation of circular RNAs regulate PKR activation in innate immunity 1.66
Genome-wide expression profiling of B Lymphocytes reveals IL4R increase in allergic asthma 1.63
RNA expression profiles from HUVECs overexpressing adenovirally delivered HIF1a and HIF2a proteins 1.61
Global host gene expression changes in KSHV+ PEL cells upon KSHV reactivation 1.58
Transcriptome of iPSC-derived Cerebral Organoids with Heterozygous Knockout in CHD8 1.58
Transcriptome-wide modulation of splicing by the exon junction complex 1.54
A cell-permeable stapled peptide inhibitor of the estrogen receptor/coactivator interaction 1.54
Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-thioguanisine 1.54
Time-dependent regulation of cellular programming of monocytes by NCOR2 [RNASeq_KD] 1.54
Pro-angiogenic Ginsenoside F1 and Rh1 Inhibit Vascular Leakage by Modulating NR4A1 1.51
Transcriptomic analysis of inter- and intra-patient variation in human iPSC cardiomyocytes: Platform for precision medicine to predict drug toxicity 1.45
Transposon-based construction of strand-specific RNA-seq libraries 1.44
TGF-b-activated LncRNA LINC00115 is a critical regulator for glioma stem-like cell tumorigenicity 1.42
Transcriptomic analysis of differential expressed genes of human tonsillar epithelial cells UT-SCC-60B in response to EV71 infection 1.42
PRMT5 Interacts with the BCL6 Oncoprotein and is Required for Germinal Center Formation and Lymphoma Cell Survival 1.4
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HEK293 cells treated with or without TNF-alpha 1.4
Transcriptome profiling (RNA-seq) of CREBBP+/+ and CREBBP+/- clones of U2932 DLBCL cell line 1.39
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] 1.37
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 1.36
The circadian transcriptional landscape in primary human mammary epithelial cells 1.36
RUNX1-ETO and RUNX1-EVI-1 differentially program the chromatin landscape in t(3;21) and t(8;21) AML but share global C/EBP-alpha dysfunction 1.36
RUNX1-ETO and RUNX1-EVI-1 differentially program the chromatin landscape in t(3;21) and t(8;21) AML but share global C/EBP-alpha dysfunction (RNA-Seq) 1.36
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 1.34
Effect of ILF3 depletion in HeLa cells on RNA steady state levels 1.32
Transcriptome analysis of human embryonic stem cells (hESCs) upon siRNA-mediated knockdown of hESC-essential genes 1.32
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [mutant MEF2C] 1.31
RNA-Seq of CD4+ T cells treated with AS1842856 or DMSO 1.26
ADAR1-editing of cellular and measles virus-derived duplex RNA 1.25
ADAR1-editing in HeLa, p150-KO and ADAR1-KO transcriptomes 1.25
Functional significance of the HIV-1 Tat signature amino acid residues 1.24
Microprocessor mediates transcription termination in long noncoding microRNA genes 1.23
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 1.2
Chronic cadmium exposure decreases the dependency of MCF7 breast cancer cells on ERα 1.19
Expression profile of MM.1S tumors folloiwing treatment with bortezomib 1.19
Intrinsic Plasma Cell Differentiation Defects in BENTA Patient B cells 1.19
Multi-omic measurements of heterogeneity in HeLa cells across laboratories 1.18
Aging-associated patterns in the expression of human endogenous retroviruses 1.17
Gene expression profiles in HMC3 cells after exposure to ketamine or its active metabolites: 2R6R-HNK and 2S6S-HNK 1.13
Enhancer Activation Requires Trans-Recruitment of a Mega Transcription Factor Complex 1.1
Enhancer Activation Requires Trans-Recruitment of a Mega Transcription Factor Complex (Gro-seq) 1.1
Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans. 1.09
Bromodomain protein BRD4 is a transcriptional repressor of autophagy and lysosomal function 1.08
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 1.07
Profiling gene expression changes in ovarian cancer cells seeded on 3D organotypic culture of omentum 1.04
RNA-Seq of SLNCR1 over-expression in the melanoma cell line A375 1.04
single cell RNA-seq from GM12878 (ENCSR673UIY) 1.02
TALEN-based knockout of mir-141 and mir-200c in SK-BR-3 cells 1.02
Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2 1.0
Viral determinants in H5N1 influenza A virus enable productive infection of HeLa cells 1.0
The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set) 0.97
EPCR Expression Defines the Most Primitive Subset of Human HSPC and Is Required for Their In Vivo Activity 0.95
Nascent RNA Sequencing after NMYC activation in SH-EP MYCNER cells 0.94
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation 0.93
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT] 0.93
Class I histone deacetylases HDAC1, 2 and 3 are histone decrotonylases 0.92
Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins 0.9
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma 0.85
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma [RNA-Seq] 0.85
Screening in Human Cardiac Organoids Identifies a Requirement for the Mevalonate Pathway in Cardiomyocyte Proliferation 0.83
RNA sequencing from FOXM1 knockout HEK293T cells reconstituted with FOXM1 isoforms a, b and c. 0.82
An evolutionary recent IFN-IL-6-CEBP axis is linked to monocyte expansion and tuberculosis severity in humans. 0.79
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 0.76
Unbiased identification of trans regulators of ADAR and A-to-I RNA editing 0.75
Identification of trans regulators of ADAR and A-to-I RNA editing using RNA-seq 0.75
Ets homologous factor has critical roles in epithelial dysfunction in airway disease [RNA-seq] 0.75
Ets homologous factor has critical roles in epithelial dysfunction in airway disease 0.75
Transcriptome-wide identification of transient RNA G-quadruplexes in human cells 0.75
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression 0.73
A cell cycle-based functional screen to identify lncRNA-based cancer biomarkers 0.72
UV_24h_GRO-Seq 0.71
Transcriptomic profiling of sequential tumours from breast cancer patients provides a global view of metastatic expression changes following endocrine therapy 0.69
A novel non-canonical signaling pathway mediates TGF-β1-induced glucocorticoid insensitivity in epithelial cells 0.68
Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence 0.68
Host transcriptome analysis of Aspergillus fumigatus infection in Airway Epithelial Cells 0.66
Multiplex Enhancer Interference Reveals Collaborative Control of Gene Regulation by Estrogen Receptor Alpha Bound Enhancers 0.66
Multiplex Enhancer Interference Reveals Collaborative Control of Gene Regulation by Estrogen Receptor Alpha Bound Enhancers [RNA-Seq] 0.66
mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress [human] 0.63
mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress 0.63
RNA sequencing of CACO-2 cells incubated with Bifidobacteria breve grown on human milk oligosaccharides. 0.62
CT Irradiation Induced Changes of Gene Expression within Peripheral Blood Cells 0.61
Frailty in middle age is associated with race-specific changes to the transcriptome. 0.57
System-wide profiling of RNA-binding proteins uncovers key regulators of virus infection 0.55
ChIP-seq and RNA-seq analysis of KMT2D-silenced metastatic melanoma cells 0.55
WNT signaling memory is required for ACTIVIN to function as a morphogen 0.53
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells 0.52
Regulation of the glucocorticoid receptor via a BET-dependent enhancer drives antiandrogen resistance in prostate cancer 0.49
RNA-sequencing of cells derived from the site of inflammation of Juvenile Idiopathic Arthritis patients 0.48
Epigenetic profiling and RNA-sequencing of Juvenile Idiopathic Arthritits (JIA) patients 0.48
ALS implicated protein TDP-43 sustains levels of STMN2 a mediator of motor neuron growth and repair 0.44
Gene expression profiles of PD1-high, PD1-intermediate, and PD1-negative tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.39
Antiviral and anti-inflammatory properties of novel anti-HIV candidate ABX464 promotes specifics RNA splicing while preserving cellular RNA integrity. 0.37
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.36
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line 0.35
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line [RNA-Seq] 0.35
The NFkB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells 0.33
RNA G-quadruplexes mark repressive upstream open reading frames in human mRNAs 0.32
4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells 0.3
Viral shRNA Knockdown of INS Promotor Activity in EndoC-βH1 Cells  0.3
TOP2B disturbed the quality of human oocytes with advanced maternal age 0.27
Transcriptomic insights into human decidual and peripheral blood CD4 T cells 0.26
Expression of the mannose receptor (CD206) defines distinct populations of human colonic macrophages in health and inflammatory bowel disease 0.23
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 0.22
Modulation of nonsense-mediated decay by rapamycin 0.22
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.18
Concomitant BCORL1 and BRAF mutations in vemurafenib-resistant melanoma cells 0.18
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_Stability] 0.16
Identification of a unique gene expression signature in mercury and 2,3,7,8-tetrachlorodibenzo-p-dioxin co-exposed cells 0.11
RNA-seq of HUVEC ± shRNA knockdown of SENCR 0.07
Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs 0.05
The role of the Calcium-Sensing receptor in colorectal cancer 0.05
The Small Molecule ISRIB Reverses the Effects of eIF2α Phosphorylation on Translation and Stress Granule Assembly 0.01
RNA-Seq of human induced pluripotent stem cell-derived cardiomyocytes from a cardiomyopathy patient and familial control 0.0


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