Gene Query: GCN1

Dataset Description Geneva Score
Transcriptional profile of human STAT1-/- fibroblasts expressing LY6E or empty control vector 51.58
Montelukast counteracts the influenza virus-induced block in unfolded protein stress response and reduces virus multiplication 32.53
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) 28.06
ENPP1 Mutation Causes Recessive Cole Disease by Altering Melanogenesis 27.89
miR-191 regulates human cell proliferation and directly targets multiple oncogenes [seq] 26.68
Genome wide miR-191 target profile determined by RIP and gene expression profiling 26.68
Presence of NAD+-capped RNA in human cells: function and removal by the DXO deNADing Protein 25.45
Modeling the MYC-driven normal-to-tumour switch in breast cancer. 24.97
Transcriptome analysis in Neobractatin treated cells 24.96
miCLIP, RNA-Seq, and Ribo-Seq in MOLM13 cells 23.53
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 22.7
Regulation of highly expressed hCINAP on translatome 21.32
Transcriptome analysis of A549 cells expressing a SUMOylation-deficient TRIM28 mutant in the context of influenza A virus infection 20.87
Sensing self and nonself circular RNAs 20.37
Identification of microRNA-668 and microRNA-489 targets by RISC immunoprecipitation 19.42
Molecular Mechanisms of Endothelial Hyperpermeability 19.35
ChIP-seq and RNA-seq in BGC823 cells after downregulation of GAS1 expression 18.37
A novel lncRNA GAS1 promotes gastric carcinogenesis and acts as a modular scaffold of WDR5 and KAT2A complexes to specify the histone modification pattern [RNA-seq] 18.37
DART-seq: an antibody-free method for global m6A detection 18.14
Enhancing human kidney organoid differentiation from pluripotent stem cells with high-throughput automation 18.11
Ribo_seq (aka ribosome profiling) analysis of control and Myc-induced U2OS cells 18.05
A radiolabeling-free, qPCR-based method for locus-specific pseudouridine detection 17.99
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation 17.77
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit 17.5
WNK1 kinase and the termination factor PCF11 connect nuclear mRNA export with transcription 17.17
RNA-dependent RNA polymerase sequence specificities of capsnatching viruses are tailored to aid viral replication 16.94
Gene expression analysis of airway epithelial cells exposed to flagellin via RNA-seq and microarray 16.87
Gene expression analysis of airway epithelial cells exposed to flagellin via RNA-seq 16.87
Identification of mRNAs with reduced ribosomal loading upon knock-down of translation factor DAP5 from hESCs. 16.79
Regulation of cellular heterogeneity and rates of symmetric and asymmetric divisions in triple-negative breast cancer 15.59
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification 15.51
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq] 15.51
LINC00520 is Induced by Src, STAT3, and PI3K and Plays a Functional Role in Breast Cancer 15.28
HDAC inhibition enhances the in vivo efficacy of MEK inhibitor therapy in uveal melanoma 14.65
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 14.64
A non-catalytic function of carbonic anhydrase IX contributes to the glycolytic phenotype and pH regulation in human breast cancer cells 14.55
SMN deficiency in spinal muscular atrophy causes widespread intron retention and DNA damage 14.44
AKT Inhibition Promotes Non-autonomous Cancer Cell Survival [RNA-Seq] 14.13
AKT Inhibition Promotes Non-autonomous Cancer Cell Survival 14.13
Cell differentiation grade determines distinct FOXA2 contributions to the cis-regulatory networks of pancreatic cancer cells 13.88
Cell differentiation grade determines distinct FOXA2 contributions to the cis-regulatory networks of pancreatic cancer cells [RNA-seq] 13.88
Cellular gene expression during Hepatitis C Virus replication revealed by Ribosome profiling 13.7
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response 13.68
RNA sequencing of primary human platelets and in vitro cell lines 13.5
Cooperation of GRSF1 and the mitochondrial degradosome (hSuv3-PNPase complex) in degradation of mitochondrial RNA 13.39
Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq 13.35
HNF1A deficiency impairs β-cell fate, granule maturation and function 13.27
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 13.08
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 12.98
Effects of Freeze-Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression 12.98
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 12.9
Short and Long RNA sequencing of human mature erythrocytes 12.86
Transcriptome profiling of self-renewing hESCs and multipotent mesoderm progenitor cells as a function of substrate stiffness 12.78
RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 12.56
RNA-seq Profiles in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 12.56
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 12.49
Ribosomal footprinting of CN34-Parental and CN34-LM1a 12.39
CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells 12.31
CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells [RNA-Seq] 12.31
Functional Importance of eRNAs for Estrogen-dependent Gene Transcriptional Activation 11.95
Base-resolution mapping reveals distinct classes of N1-methyladenosine methylome in nuclear- and mitochondrial-encoded transcripts 11.93
CD95/Fas ligand mRNA is toxic to cells 11.86
Decrease in EZH2 histone methyltransferase mediates the effects of fluid shear stress (FSS) in endothelial cells 11.84
Comparative transcriptomic analysis of human and Drosophila extracellular vesicles reveals extensive conservation 11.78
RNA transcriptome analysis during HSV-1 infection 11.69
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 11.63
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 11.63
Ribosomal footprinting of MDA-Parental and MDA-LM2 11.62
Intrahepatic MAIT cell gene expression revealed by RNA-seq 11.59
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression 11.55
Transcriptome data from human endocrine cells recovered from mouse grafts with pre-engraftment controls 11.48
Systematic discovery of endogenous human ribonucleoprotein complexes 11.46
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 11.41
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer 11.36
MeRIP sequencing reveals angiogenic properties of vascular endothelial cells 11.33
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) [RNA-seq] 11.33
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) 11.33
A Werner syndrome stem cell model unveils heterochromatin alterations as a driver of human aging 11.3
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells 11.16
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [RNA-seq] 11.16
RNA-seq of tumor cells following angiopellosis extravasation 11.14
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] 11.04
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice 11.04
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 10.98
Selective expression of long non-coding RNAs in a breast cancer cell progression model 10.82
BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [NET-seq] 10.64
Determining effects of microbial metabolite, Urolithin A on colon epithelial cells 10.63
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 10.56
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 10.46
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 10.46
Detection of internal N7-methylguanosine (m7G) RNA modifications by mutational profiling sequencing 10.42
An RNA-centric dissection of host complexes controlling flavivirus infection 10.38
An RNA-centric dissection of host complexes controlling flavivirus infection [RNA-Seq] 10.38
Role for the Transcriptional Activator ZRF1 in Breast Cancer Progression and Endocrine Resistance 10.36
Landscape and variation of RNA secondary structure across the human transcriptome 10.35
Widespread regulated alternative splicing of single codons accelerates proteome evolution 10.31
Reconstruction of the Human Blood-Brain Barrier in vitro reveals a Pathogenic Mechanism of APOE4 in Pericytes 10.3
Allogeneic mature human dendritic cells generate superior alloreactive regulatory T cells in the presence of IL-15 10.2
High RNA polymerase II occupancy on herpes simplex virus 1 late genes early in infection suggests progression to elongation is a critical switch to trigger late viral gene expression 10.14
Epigenomic profiling reveals the key function of histone H3K9 methylation during tumor transformation process 10.09
miRNAs affected by antagomiR-17 treatment 10.06
Quiescent glioblastoma cells shift to an epithelial-mesenchymal transition-like gene program 10.04
Genome-wide transcriptional profiling of YAP target genes in human endothelial cells 10.03
Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors 10.01
LncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression 9.93
DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure 9.92
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α 9.9
ONECUT2 Drives Neuroendocrine Prostate Cancer Through Hypoxia Signaling 9.9
Genome-wide CRISPR-Cas9 screen identifies functionally relevant microRNAs in AML 9.86
Expression profile of wild type (WT) vs miR-155-/- in FLT3-ITD+ AML (MV4-11) cell lines 9.86
IL-6/Stat3-Dependent Induction of Distinct, Obesity-Associated Natural Killer Cells Deteriorates Energy and Glucose Homeostasis 9.69
RNA-Guided Human Gene Activation by Cas9/CRISPR-Based Engineered Transcription Factors 9.65
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 is essential for p53-null cancer cells 9.6
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] 9.5
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution 9.5
RNAseq of ribosomal fractionation to assess the effect of CBFB on translation regulation 9.5
RNA m5C Methylation in breast cancer using MeRIP-Seq 9.43
Modeling Familial Cancer with iPSC Approaches 9.39
Next Generation Sequencing of isolated EGFR+ and HLA-G+ first trimester human trophoblasts 9.38
Transcriptomic but not genomic variability confers phenotype of breast cancer stem cells 9.36
Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient 9.31
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 9.25
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 9.25
Evolved Labels of Placental Invasion in Human and Bovine Endometrial Stroma 9.21
Genome-wide RNA deep sequencing of CAL-101 or AKTi primed human T cells in comparison to traditionally expanded T cells 9.21
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 9.19
A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development [BM low-input mRNA-seq] 9.13
Specific labeling of stem cell activity in human colorectal organoids using an ASCL2-responsive minigene 9.06
RNA-sequencing in irradiated and normal A549 cells. 9.0
Reassessment of Exosome Composition 8.99
Transcriptomics of human macrophages upon infection with Legionella pneumophila and two isogenic mutants, LamA and AnkH using RNA-seq 8.97
Developmental stage specific chromosome architecture in human erythroid cells (RNA-seq) 8.82
Developmental stage specific chromosome architecture in human erythroid cells 8.82
Human co-transcriptional splicing kinetics and coordination revealed by direct nascent RNA sequencing 8.81
The comparison of high-throughput single-cell RNA-seq methods 8.76
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 8.74
Simultaneous quantification of antibody-RNA conjugates and the transcriptome from fixed cells by RAID 8.71
Comparative genome-wide analysis of human BM IL3Rα-high precursors show a more MΦ-, DC- and OC committed gene expression profile, as compared to IL3Rα-low precursors 8.67
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes 8.64
Gene expression profile in response to HIF-1α inhibition together with PPARα activation and the postnatal factors (T3, IGF-1 and dexamethasone) in hiPSC-CMs 8.56
Dynamic epigenetic remodeling underlies microRNA-mediated transdifferentiation of human adult fibroblasts into neuronal subtypes 8.48
Transcriptomic profiling of HeLa cells infected with Salmonella Typhimurium 8.46
High-throughput sequencing of PROMPT-enriched samples. 8.39
Ascorbate Suppresses VEGF Expression in Retinal Pigment Epithelial Cells 8.35
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection 8.3
Identification of Atrial Fibrillation associated genes and functional non-coding variants 8.29
U1 snRNP telescripting regulates size-function stratified human genome 8.24
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines 8.2
Highly-motile versus unsorted MDA-MB-231 breast cancer cells 8.19
Tumors with TSC mutations are sensitive to CDK7 inhibition through NRF2 and glutathione depletion 8.19
Gene expression changes in THP1 cells at day 2 and 4 following shRNA knock-down of RUVBL2 8.18
RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with pancreatic carcinoma 8.09
Transcriptome analysis-identified long noncoding RNA CRNDE in maintaining endothelial cell proliferation, migration, and tube formation 8.08
EIF1AX-A113 splice and RAS mutations cooperate to drive thyroid tumorigenesis through ATF4 and c-MYC 8.03
Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology 8.03
Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cells 7.92
Antibodies That Convert Bone Marrow Into Trafficking Microglia-Like Cells Reduce Brain Amyloid 7.89
Genomic basis for clinical response to histone deacetylase inhibition in advanced urothelial carcinoma 7.86
An optimization system for isolating and sequencing of single human colon cancer cells 7.82
Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid  during virologically suppressed HIV 7.81
Expression profiling of MCF-7 cells with treatment of TCDD 7.78
Expression profiling of MCF-7 cells with 10nM treatment of TCDD 7.78
Profiling of escape kinetics of viruses subjected to RNAi 7.65
The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion 7.63
XBP1s Activation Globally Remodels N-Glycan Structure Distribution Patterns 7.61
Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2 7.6
Global transcriptome analysis of HAP1 cells 7.52
Epidermal growth factor activates β-catenin via integrin-linked kinase to control proliferation of mesenchymal stromal cells. 7.5
Proliferation pause as an early blockade of human cellular reprogramming toward pluripotency [RNA-seq analysis] 7.33
Generating Patterned Kidney Organoids for Studying Development and Diseases 7.32
Comparison of single-cell transcriptomics quality between unfixed cells and cells that were fixed and mock stained according to the RAID procedure 7.28
Differentially expressed genes post knock down of lincDUSP26 7.16
RNA-seq analysis of control and NRDE2-depleted breast cancer cells 7.13
Human germ cell formation in xenotransplants of induced pluripotent stem cells carrying X chromosome aneuploidies 7.06
Global response to chemotherapy-induced apoptosis 7.05
Consequences of Ribosomal Protein Haploinsufficiency in Human Hematopoiesis 7.04
RNA-Seq comparative analysis of human neuroblastoma cells before and after their confrontation to the embryonic microenvironment 7.04
Novel Form of JARID2 is Required to Regulate Differentiation in Keratinocytes. 7.0
Role of microRNAs in the interaction between Salmonella and the host cell 6.97
Transcriptomic Profiling of Posterior Polymorphous Corneal Dystrophy 6.93
T47D RNA-seq and ChrRNA-seq data 6.89
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 6.89
TT-Seq captures the human transient transcriptome 6.85
Expression level comparison under dividing and quiescent states in human primary fibroblasts 6.81
4sU-seq of HFF exposed to salt and heat stress 6.76
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 6.73
Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 6.73
Transcriptomic profiling of mesenchymal stem cells (MSC) differentiation into mesangial cells 6.64
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene 6.58
Postnatal lipids drive hepatocyte maturation 6.57
Anti-inflammatory effect of indoleacrylic acid (IA) 6.57
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export 6.55
The metabolome regulates the epigenetic landscape during naïve to primed human embryonic stem cell transition 6.54
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 6.54
FUS mutant human motoneurons transcriptome analysis reveals altered pathways and impairment of microRNA function 6.53
Comparative gene expression profiling of MHH-CALL4 cells subject to pharmacological JAK2 inhibitor treatment (ruxolitinib or CHZ868) or shRNA-mediated JAK2 depletion in vitro 6.52
JAK2 is dispensable for maintenance of JAK2 mutant B-cell acute lymphoblastic leukemias 6.52
Multiple roles for Grainyheadlike transcription factors in the establishment and maintenance of human mucociliary airway epithelium 6.51
RUNX1-ETO and RUNX1-EVI-1 differentially program the chromatin landscape in t(3;21) and t(8;21) AML but share global C/EBP-alpha dysfunction 6.51
RUNX1-ETO and RUNX1-EVI-1 differentially program the chromatin landscape in t(3;21) and t(8;21) AML but share global C/EBP-alpha dysfunction (RNA-Seq) 6.51
MLL-AF4 Spreading Identifies Binding Sites that Are Distinct from Super-Enhancers and that Govern Sensitivity to DOT1L Inhibition in Leukemia. 6.5
Targeting JNK Pathway Expands Human Hematopoietic Stem Cells 6.49
Morphological and molecular characterization of human dermal lymphatic collectors 6.46
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress (Total RNA) 6.43
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 6.42
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 6.39
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 6.39
Transcriptomes of iPSC-derived and post-mortum Hypothalamus Neurons from obese and control donors 6.37
SERPINA3- a novel keratinocyte differentiation promotor mediates epidermal barrier repair response in psoriatic lesion 6.35
Differentiation enhances Zika virus infection in neuronal brain cells 6.34
Transcriptome sequencing of human coronary artery smooth muscle cell under treatment of nitrated fatty acid 6.33
Exploring the RNA landscape of endothelial exosomes 6.31
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 6.29
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 6.26
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 6.23
A next generation sequencing based approach to identify extracellular vesicle mediated mRNA transfers between cells 6.2
Profiles of Long Noncoding RNAs in Human Naive and Memory T Cells 6.19
Gene expression profile of HGC27 gastric cancer cell p53 KO and KD 6.18
Function of HNRNPC in breast cancer cells by controlling the dsRNA-induced interferon response 6.15
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells 6.15
Searching for target genes of miR-508/509/506/514 in HCT116 cells 6.14
Arrayed molecular barcoding identifies TNFSF13 as a positive regulator of acute myeloid leukemia-initiating cells 6.13
Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes 6.12
Expression profiling of etoposide-induced senescent cells 6.08
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 6.06
RNA-sequencing with micro-dissected boundary organoid into anterior, posterior, and boundary regions 6.01
O-glcnAc reprograms cellular energetics 6.01
Transcriptional regulation of autophagy-lysosomal function in BRAF-driven melanoma progression and chemoresistance 5.95
STRIPAK directs PP2A activity to promote oncogenic transformation 5.95
Mutant KRAS/BRAF Reprograms the Enhancer Landscape via GATA1 to Drive Chemoresistance 5.9
Genomic profiling of human spermatogonial stem cells [BulkRNA-Seq] 5.89
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes 5.89
Identification of HOXB13 target genes responsive to BET inhibitors 5.85
Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response 5.85
Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation 5.82
Dynamic gene expression in T-ALL following treatment and release of gamma-secretase inhibition [GRO-Seq] 5.81
METTL3 and WTAP 5.8
Regulatory network controlling tumor-promoting inflammation in human cancers 5.8
Regulatory network controlling tumor-promoting inflammation in human cancers [RNA-seq] 5.8
LIN28A Over-expression RNAseq 5.79
Transcriptomic analysis of healthy donor and Sickle Cell Disease (SCD) hematopoietic stem/progenitor cells 5.7
High-throughput RNA sequencing on circular RNA profiles of human bladder cancer tissues and normal bladder tissues 5.64
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 5.63
RNA-Seq analysis and comparison of corneal epithelium in keratoconus and myopia patients 5.6
The transcriptome and chromatin accessbility landscape of mammalian germline 5.59
The NFkB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells 5.59
RNA-seq analysis of differentiating human erythroblasts 5.59
Transcriptomic Analysis Of circRNAs/miRNAs/mRNAs upon Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection 5.59
mRNA-sequencing of U87 glioblastoma and DAOY medulloblastoma spheroidal aggregates undergoing electrotaxis 5.55
Coordination of neuron production in mouse and human cerebral cortex by the homolog of Drosophila Mastermind protein 5.54
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells 5.53
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] 5.53
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation 5.51
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq) 5.51
P120-catenin dependent glioma-cell networks drive growth and diffuse brain infiltration 5.51
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 5.46
Impact of GDF15 expression of ovarian cancer cell on stroma and Cisplatin responses 5.44
Effect of BCL11B knockdown on transcriptome of human T-cell precursors 5.43
Complete deconvolution of cellular mixtures based on linearity of transcriptional signatures 5.41
Comparison of small cell lung cancer PDX model FHSC04 for response to LSD1 inhibitor RG6016/ORY1001 5.41
miR-93 Targets in Human Endothelial Cells 5.38
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells (longRNA-seq) 5.38
Glioma-derived miRNA-containing extracellular vesicles induce angiogenesis by reprogramming brain endothelial cells 5.38
Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow 5.34
Next Generation Sequencing Facilitates Quantitative Analysis of Human Pluripotent Stem Cell-Derived Endocardial-like And Primary Cardiac Endothelial Cell Transcriptomes 5.28
Replication defective viral products exploit a cellular pro-survival mechanism to establish persistent infections 5.24
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 5.2
Argonaute proteins couple chromatin silencing to alternative splicing 5.15
Argonaute proteins couple chromatin silencing to alternative splicing (RNA IP-Seq) 5.15
CXCR4 is a host factor that regulates Plasmodium development in hepatocytes 5.11
FBP2 inhibits sarcoma progression by restraining mitochondrial biogenesis 5.1
Comparative total RNA and mRNA sequencing and systems analysis reveals nascent transcriptional response to early HIV-1 infection in a CD4+ T cell line 5.1
Structure and degradation of circular RNAs regulate PKR activation in innate immunity 5.06
Comprehensive comparative analysis of 5’ end RNA sequencing methods 5.02
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [SLAM-Seq] 5.0
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction [III] 4.97
RNASeq of 4SU labelled nascent RNA in MV4;11 cell treated with DMSO, I-BET, SGC0946 and combination of I-BET and SGC0946 4.95
Whole blood RNAseq from Generalised Pustular Psoriasis patients and healthy individuals 4.83
Enhancement of Human B Cell Differentiation and Function in Lymph Nodes by the TLR9 Agonist MGN1703 4.74
Human cells contain natural double-stranded RNAs with potential regulatory capacity 4.73
Physiologic expression of Sf3b1K700E causes impaired erythropoieses, aberrant splicing, and sensitivity to pharmacologic spliceosome modulation 4.72
Programmable RNA N6-methyladenosine editing by CRISPR-Cas9 conjugates 4.7
ADAR1-editing in HeLa, p150-KO and ADAR1-KO transcriptomes 4.7
ADAR1-editing of cellular and measles virus-derived duplex RNA 4.7
The contribution of adenosine receptor 3-mediated signaling to TLR4-induced responses by human dendritic cells 4.68
The dynamic landscape of coding and non-coding RNAs in the innate immune response to microbial pathogens 4.64
Toxicogenomics of the flame retardant tris (2-butoxyethyl) phosphate in HepG2 cells using RNA-seq. 4.59
Analysis of active enhancers and direct androgen receptor target genes in VCaP prostate cancer cells 4.55
Sorted MDMs with RFP+GFP+ or RFP+GFP- Mtb 4.53
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 4.53
CHD7 is Suppressed in the Perinecrotic/Ischemic Microenvironment and is a Novel Regulator of Angiogenesis 4.53
Whole Transcriptome RNASeq Data for Cell-Sorted Antibody Secreting Cells (ASC) 4.49
hnRNP C is a key regulator of protein synthesis in mitosis 4.47
RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining 4.45
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions 4.39
Histone deacetylase inhibition enhances antimicrobial peptide but not inflammatory cytokine expression upon bacterial challenge 4.38
The ribonuclease activity of SAMHD1 is required for HIV-1 restriction 4.38
Innate-like activation of mucosal-associated invariant T cells in mycobacterial infection 4.37
mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs 4.36
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA 4.35
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 4.34
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 4.34
Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [TMCC2] 4.33
Human Sandhoff Disease Cerebral Organoids Exhibit Enlarged Size, Increased Cellular Proliferation, and Impaired Differentiation 4.31
Hypoxic transcriptome of SQ20B human head and neck cancer cells 4.3
transcriptome studies of BRD4 inhibitor BDF-1253 on renal clear carcinoma 786-O cells 4.29
mRNA expression profile of Lymphocytes by high-throuput sequencing 4.26
Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates 4.21
RNA-seq analysis of umbilical cord blood cells upon knockdown of NAP1L3 4.2
Cap-specific terminal N6-methylation of RNA by an RNA polymerase II-associated methyltransferase. 4.2
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 4.18
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 4.18
The mithralog EC-7072 is highly cytotoxic to chronic lymphocytic leukemia cells by targeting the B-cell receptor signaling pathway 4.18
The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions 4.18
Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing 4.11
Transcriptional regulation in pluripotent stem cells by Methyl CpG binding protein 2 (MeCP2) 4.05
GATA2 is Dispensable for Generation of Hemogenic Endothelium But Required for Endothelial-to-Hematopoietic Transition 3.9
Patterned human microvascular grafts enable rapid vascularization and increase perfusion in infarcted hearts 3.9
RNA editing in nascent RNA affects pre-mRNA splicing 3.89
Gene Expression Analysis of HUVEC Seeded rBEL Contructs at Low and High Phases of Glucose Consumption 3.86
RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways 3.86
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity 3.79
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid 3.77
RNA deep sequencing analysis of human brain microvascular endothelial cells (ECs) treated with glioma-conditioned medium (glioma-CM) 3.66
X-Ray induced DNA-Hydroxymethylation changes 3.61
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] 3.59
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 3.59
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition [RNA-Seq] 3.57
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition 3.57
Peripheral whole blood mRNAs and lncRNAs expression analysis in eosinophilic asthmatics 3.56
RNA deep sequencing analysis of glioma stem cells(GSCs) and non-GSCs 3.55
Comparative Analysis of Cas9 Activators Across Multiple Species 3.51
miR-126 Orchestrates an Oncogenic Program in B-Cell Precursor Acute Lymphoblastic Leukemia 3.46
Differential responses of human fetal brain neural stem cells to Zika virus infection 3.4
RNA Sequencing of Human iPS derived Cardiomyocytes 3.38
CDK12 inhibition in Hep3B, Huh7 and SNU449 cells 3.36
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships 3.26
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) 3.26
Loss of Function Mutations in ETS2 Repressor Factor (ERF) Reveal a Balance Between Positive and Negative ETS Factors Controlling Prostate Oncogenesis [22PC RNA-seq] 3.24
System-wide profiling of RNA-binding proteins uncovers key regulators of virus infection 3.2
SIRT7 Antagonizes TGF-β Signaling and Inhibits Breast Cancer Metastasis 3.13
Simultaneous detection and relative quantification of coding and non-coding RNA using a single sequencing reaction 3.04
RNA sequencing of CACO-2 cells incubated with bifidobacteria grown on human milk oligosaccharides. 3.04
mRNA-Seq profiling of human developing kidney 3.0
In search for materials able to be colonized by a normal endothelium: сharacterization and NGS gene expression profiling of human primary endotheliocytes cultivated on electrospun 3D matrices 2.98
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation 2.93
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation [bulk RNA-Seq] 2.93
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response [bulk RNA-seq] 2.91
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 2.91
Aneuploidy triggers an immune response 2.9
DHX36 resolves G-rich structures in mRNA untranslated region to allow their translation 2.86
Impact on erythroid progenitor type on erythroid differntiation 2.83
Epigenetic profiling and RNA-sequencing of Juvenile Idiopathic Arthritits (JIA) patients 2.81
RNA-sequencing of cells derived from the site of inflammation of Juvenile Idiopathic Arthritis patients 2.81
ETS1 induction by the omental microenvironment promotes ovarian cancer metastasis [RNA-Seq] 2.73
ETS1 induction by the omental microenvironment promotes ovarian cancer metastasis 2.73
SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons 2.72
Mitochondrial phosphoenolpyruvate carboxykinase (PCK2) regulates metabolic adaptation and glucose-independent tumor cell growth 2.71
Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle 2.62
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 2.6
GATA3 enhances the neurogenic potential of primary human astrocytes after traumatic injury [exp2] 2.6
Illumina sequencing of vaginal epithelial cells from women using depot medroxyprogesterone acetate or non-hormonal contraception 2.57
Common inflammatory pathways between NEC and Crohn's disease 2.56
Transcriptome landscape of HeLa response upon triamcinolone acetonide 2.49
Comparative Analysis of the Transcriptome of Latent Autoimmune Diabetes (LADA) Patients from Eastern China 2.47
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 2.46
RNA-seq of IL-4 stimulated human keratinocytes 2.43
Molecular characterization of gene regulatory networks in primary human tracheal and bronchial epithelial cells. 2.39
Genome-wide Dose-dependent Inhibition of Histone Deacetylases Reveals Their Roles in Enhancer Remodeling and Suppression of Oncogenic Super-enhancers 2.38
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 2.38
CDK4/6 inhibitors target SMARCA4-determined cyclin D1 deficiency in hypercalcemic small cell carcinoma of the ovary (I) 2.37
Recovery and analysis of nascent RNA 2.36
The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains 2.36
Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS] 2.32
Differences in miRNA Detection Levels are Technology and Sequence Dependent 2.32
Subcellular RNA fractions of HSV-1 infected primary human fibroblasts 2.31
RNA sequencing of isogenic BRCA2 haploinsufficient vs. wild-type T-ALL cells 2.28
Multiplex Enhancer Interference Reveals Collaborative Control of Gene Regulation by Estrogen Receptor Alpha Bound Enhancers [RNA-Seq] 2.23
Multiplex Enhancer Interference Reveals Collaborative Control of Gene Regulation by Estrogen Receptor Alpha Bound Enhancers 2.23
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 2.18
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 2.18
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 2.15
Effect of ILF3 on translation during homeostasis and the antiviral response 2.08
Long noncoding RNA LNMAT1 promotes lymphatic metastasis in bladder cancer 2.03
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 2.02
Gene expression in skeletal muscle in older individuals subject to ten days of complete bed rest. 2.01
The Hippo pathway kinase LATS1 scaffolds Beclin1 in autophagy regulation in hepatocellular carcinoma 2.0
RNA sequencing of Asthmatic Human Airway Smooth Muscle Cells II 1.98
Inhibition of H3K4 demethylation induces autophagy in cancer cell lines 1.95
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer 1.94
Epigenetic activation and memory at a TGFB2 enhancer in systemic sclerosis 1.93
Transcriptome-wide identification of transient RNA G-quadruplexes in human cells 1.91
RNA sequencing of CACO-2 cells incubated with Bifidobacteria breve grown on human milk oligosaccharides. 1.91
single cell RNA-seq from GM12878 (ENCSR673UIY) 1.89
Genetic and Epigenetic Landscapes of Laterally Spreading Tumors of the Colorectum 1.84
A comprehensive gene expression analysis identifies novel immune signatures in cesarean-born infants 1.84
Genome-wide profiling of cervical RNA-binding proteins identified HPV regulation of RNASEH2A expression by viral E7 and E2F1 1.8
Transcriptome-analysis of patient-derived normal and ulcerative colitis intestinal epithelial organoids 1.79
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies 1.79
Genome-wide view of the impact of Spt5-Pol II inhibitors (SPIs) on mRNA levels [RNA-Seq 24h] 1.77
RNA-sequencing of Wnt-dependent and Wnt-independent of Glioblastoma stem cell cultures 1.76
RNA-Seq following PCR-based sorting reveals rare cell transcriptional signatures 1.75
Wnt5a and its downstream transcription factor Stat3 are therapeutic targets for diffuse intrinsic pontine gliomas 1.73
Metabolism as an early predictor of DPSCs aging 1.72
The Chromatin-Looping Factor ZNF143 Engages at Looping Promoters to Favor the Estrogen Response in Breast Cancer (RNA-seq) 1.67
The Chromatin-Looping Factor ZNF143 Engages at Looping Promoters to Favor the Estrogen Response in Breast Cancer 1.67
Widespread backtracking by RNA pol II is a major effector of gene activation, 5’ pause release, termination and transcription elongation rate 1.66
Tri-mannose grafting of chitosan nanocarriers remodels the macrophage response to bacterial infection 1.65
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 1.63
Expression data for hiPSC-derived RPE treated with 10mM Nicotinamide or vehicle 1.61
Functional interdependency of BRD4 and DOT1L in MLL leukaemia 1.61
RNASeq of MV4;11 cell treated with DMSO, I-BET, SGC0946 and combination of I-BET and SGC0946 1.61
Identification of the RB loss-induced transcriptome and E2F1 cistrome in prostate cancer 1.59
Identification of the RB loss-induced transcriptome in prostate cancer [RNA] 1.59
CRISPR/Cas9-mediated ASXL1 mutation in U937 cells perturbs myeloid differentiation 1.57
mRNA gene expression profiling in a human AML cell line treated with small molecule inhibitors that impact different RNA polymerase transcription complexes, or their combination, in comparison to a global DNA-damaging anthracycline compound 1.57
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 1.54
Time-dependent regulation of cellular programming of monocytes by NCOR2 [RNASeq_TK] 1.54
Transcriptomics profiling of CD141+ dendritic cells isolated from peripheral blood or synovial fluid of arthritis patients 1.49
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 1.48
Gene expression changes due to PARP knockdown in human cells 1.47
The mRNA expression analysis of psoriasis skin lesion mesenchymal stem cell 1.42
Macrophages redirect phagocytosis by non-professional phagocytes and influence inflammation 1.4
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 1.39
RNA-seq of primary patient AML samples 1.35
The flightless I protein is involved in the genome-wide mRNA post-transcriptional regulation in lung carcinoma cells 1.29
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development 1.25
The impact of oil spill to lung health – insights from an RNA-seq study of human airway epithelial cells 1.23
Human Treg IL-12 stimulation 1.22
YTHDF1 Amplifies Wnt/β-Catenin Signaling to Promote Intestinal Stemness 1.21
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT] 1.21
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation 1.21
Flura-seq identifies organ-specific adaptations in metastasis-initiating cells 1.2
Effect of BCL11B overexpression on transcriptome of T-cell acute lymphoblastic leukemia (T-ALL) cells 1.17
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling 1.17
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling (mRNA) 1.17
Small-molecule targeting of brachyury transcription factor addiction in chordoma [rnaseq_compound] 1.15
TSLP acts on neutrophils to drive complement-mediated killing of methicillin-resistant Staphylococcus aureus 1.11
Folliculin regulates mTORC1/2 and WNT pathways in early human pluripotency 1.1
Transposon-based construction of strand-specific RNA-seq libraries 1.08
Gene expression profile in endometrial organoids cultured in normal follicular phase vs PCOS-like hormone profile 1.08
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq) 1.08
RNA-Sequencing approach for the identification of novel long non-coding RNA biomarkers in colorectal cancer 1.03
Pro-angiogenic Ginsenoside F1 and Rh1 Inhibit Vascular Leakage by Modulating NR4A1 1.02
Determining mRNA half-lives on a transcriptome-wide scale 1.0
microRNAs with an AAGUGC seed motif constitute an integral part of a signaling network driving NSCLC cell proliferation 0.99
Heterogeneous maintenance of human tissue resident memory T cells based on efflux capacities 0.94
Genome-wide transcriptome analysis of organotypic rafts derived from human papillomavirus type 16 infected primary keratinocytes [3D raft] 0.93
Genome-wide mapping of TEL-AML1 targets in acute leukemia 0.92
Functional Inflammatory Profiles Distinguish Myelin-Reactive T Cells from Patients with Multiple Sclerosis 0.9
MAIT cell RNA sequencing 0.89
Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course 0.89
Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains 0.89
Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity 0.89
Genome-wide expression analysis of human hTert immortalized fibroblasts after donwregulation of MCM7 0.89
Solid phase chemistry to covalently and reversibly capture thiolated RNA 0.87
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet 0.86
A toxicogenomics approach to screen chlorinated flame retardants tris(2-chloroethyl) phosphate and tris(2-chloroisopropyl) phosphate for potential health effects 0.81
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 0.79
Frailty in middle age is associated with race-specific changes to the transcriptome. 0.79
Epigenome Editing by a CRISPR/Cas9-Based Acetyltransferase Activates Genes from Promoters and Enhancers 0.78
RNA-seq study reveals unique transcriptome expression in systemic lupus erythematosus patients with distinct autoantibody profile 0.73
Serotonin-induced hyperactivity in SSRI-resistant major depressive disorder patient-derived neurons 0.72
Integrated high-throughput screen to identify novel treatment leads for pediatric acute myeloid leukemia (AML) 0.63
The control of rRNA synthesis during the directed differentiation of human embryonic stem cells precedes heterochromatin formation. 0.62
Identification of miRNA-mRNA regulatory network for Human Atrial Aging 0.61
Identification of miRNA-mRNA regulatory network for Human Atrial Aging [mRNA] 0.61
Zika virus antagonizes interferon response in patients and disrupts RIG-I-MAVS interaction through its CARD-TM domains 0.57
Gene expression analysis of human adenomas. 0.56
The effect of slow and rapid H2S production on the levels of LPS-induced proinflammatory mediators and transcription in different human cell cultures 0.55
Transcriptome-wide response to synthetic chromatin protein PcTF 0.54
The pioneer factor CEBPA modulates vitamin D signaling 0.51
Effects of transcription factor CEBPA knockdown on vitamin D target gene regulation in THP-1 cells 0.51
KLF6-dependent transcription in renal cancer cells 0.51
TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation 0.47
Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [Primary RNA-Seq] 0.47
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] 0.47
Transcriptional repression in hypoxia is mediated by the Sin3A histone deacetylase complex [RNA-seq] 0.46
Quantitative Proteomics Reveals a Unique Wiring of Signaling Pathways that Protects Human Regulatory T Cell Identity 0.44
RNA-seq analysis of SLIRP knockdown with 1nM DHT in LNCaP cells 0.43
Rnase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs 0.43
Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes 0.4
Intron retention induced by microsatellite expansions as a disease biomarker. 0.35
Cell cycle dynamics of human pluripotent stem cells primed for differentiation 0.29
Genome-wide hsa-miR-503, hsa-miR-103, and hsa-miR-494 target profiles 0.27
hsa-miR-503, hsa-miR-103, and hsa-miR-494 genome wide target profiles [RNA-Seq and RIP-Seq] 0.27
RNA sequencing of prostate cancers reveal insights on the prognostic significance of visibility on multi-parametric MRI 0.22
LHX9 rescues KRAS suppression through transcriptional regulation of YAP1 0.2
LHX9 rescues KRAS suppression through transcriptional regulation of YAP1 [RNA-Seq] 0.2
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells 0.19
RNA expression profiles comparing primary and omental ovarian carcinoma samples 0.17
Temporal comparison of transcriptomic alterations in human, mouse and rat primary B lymphocytes exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) 0.16
Targets mediated microRNA arm-imbalance promotes gastric cancer progression [lncRNA] 0.15
Zika virus directly infects human peripheral neurons and induces cell death 0.1
β-Caryophyllene Enhances the Transcriptional Upregulation of SREBP-dependent Lipid Biosynthesis in Breast Cancer Cells 0.1
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_Stability] 0.09
Kidney compartment specific eQTL studies highlight causal genes and pathways for renal disease development 0.09
UPF1/SMG7-dependent MicroRNA-mediated Gene Regulation 0.07
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.03
Human pulmonary artery endothelial cells (hPAECs) with downregulated BMPR2 signaling demonstrate a unique gene expression signature after exposure to overexpression of AdAlox5 0.02


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