GENEVA: Gene Expression Variation Analysis

Dataset	Description	Geneva Score
	Identification of IL-27 as potent regulator of inflammatory osteolysis associated with vitamin E-blended ultra-high molecular weight polyethylene debris of orthopedic implants	155.81
	Stimulation of isolated plasmacytoid dendritic cells (pDCs) with TLR9 agonist CpG C (CpG) and TLR7 agonist imiquimod (IMQ)	37.62
	Transcriptomic insights into human decidual and peripheral blood CD4 T cells	31.39
	Antibodies That Convert Bone Marrow Into Trafficking Microglia-Like Cells Reduce Brain Amyloid	30.84
	Transcriptional profiling of microglia; current state of the art and future perspectives	23.38
	Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases	22.32
	Transcriptomic profiling of human CD34+ derived mast cells [RNA-Seq]	22.32
	Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF	22.22
	IFN-γ Represses M2 Gene Expression in Human Macrophages by Suppressing and Disassembling MAF-binding Enhancers [RNA-seq]	22.22
	Functional studies of missense TREM2 mutations in human stem cell-derived microglia	18.55
	CRIG identifies a novel population of highly phagocytic peritoneal macrophages associated with disease severity in patients with cirrhosis and ascites	17.09
	RNA-seq analysis of activated plasmacytoid dendritic cell subsets after viral infection	16.75
	TNF response in promyelocytic and granulocytic forms of HL60/S4 cells	13.58
	Different Temporal Effects of Ebola Virus VP35 and VP24 Proteins on Global Gene Expression in Human Dendritic Cells	13.07
	IL-6 augments IL-4-induced polarization of primary human macrophages through synergy of STAT3, STAT6 and BATF transcription factors	12.86
	Transcriptomic profiling of human peripheral blood-derived mast cells	12.48
	Genome-wide analyses of chromatin state in human mast cells reveal molecular drivers and mediators of allergic and inflammatory diseases	12.48
	Efficient derivation of microglia-like cells from human pluripotent stem cells	12.47
	Microglia innatly develop within cerebral organoids	12.2
	RNA-Seq from human ILC transitional populations	11.35
	Expression profiling of ILC transitional populations and Aiolos accessability and H3K27ac histone modifications in transfected MNK3 cells	11.35
	JAK/STAT inhibition in macrophages promotes therapeutic resistance by inducing expression of protumorigenic factors	11.28
	Transcriptional profiles of normal human mature B cells	11.15
	AQP5-Expressing Cells Serve as Stem Cells and Cancer Origins in the Distal Stomach	11.03
	RNA-seq of stable and unstable section of human atherosclerotic plaques	9.2
	B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis	9.07
	Gene expression profile of regenerated CD8αα T cells and CD8αβ T cells from LMP2 T-iPSCs	8.39
	RNA sequencing based comparative analysis of human hepatic progenitor cells and their niche from alcoholic steatohepatitis livers	8.21
	Catalogue of differentially expressed long non-coding RNAs following activation of human and mouse innate immunity	7.95
	Transcriptomics of human macrophages upon infection with Legionella pneumophila and two isogenic mutants, LamA and AnkH using RNA-seq	7.52
	Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) [RNA-seq]	7.47
	Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10)	7.47
	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia	7.26
	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (RNA-seq)	7.26
	Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia	6.94
	Alternative classification of glioblastoma based on BUB1B-inhibition sensitivity	6.77
	Non-inflammatory tumor microenvironment of Diffuse Intrinsic Pontine Glioma (DIPG)	6.02
	Diverse and Targetable Kinase Alterations Drive Histiocytic Neoplasms	5.73
	Human primary macrophages derived in vitro from circulating monocytes comprise adherent and non-adherent subsets with differential expression of Siglec-1 and CD4 and permissiveness to HIV-1 infection	5.19
	The ribonuclease activity of SAMHD1 is required for HIV-1 restriction	5.04
	Identification of renal resident macrophages across species	4.76
	Chronic Myeloid Leukemia (CML), induced pluripotent stem cell (iPSC)-derived lin-CD34+CD45+ (iCD34) cell population	4.7
	Gene expression profiling of human MSC-educated macrophages vs. classical macrophages from bone marrow and blood	4.37
	Pluripotent stem cell model of Nakajo-Nishimura syndrome untangles proinflammatory pathways mediated by oxidative stress	4.19
	Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma	4.13
	RNA sequencing of human macrophages treated with iron chelator deferiprone (DEF), with and without lipopolysaccharide (LPS)	3.52
	RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program (RNA-Seq)	3.47
	RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program	3.47
	Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas	3.42
	Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq]	3.42
	High-throughput sequencing of the human hepatic progenitor cell niche in PSC and HCV.	3.32
	Transcriptomes of human monocytes and monocyte-derived macrophages with or without glucocorticoid treatment	3.29
	Migration through a small pore disrupts inactive chromatin organisation in neutrophil-like cells [RNA-seq]	3.17
	RNA-seq and Hi-C sequencing of neutrophil-like cells migrated through large or small pores	3.17
	Alternative splicing of differentiated myeloid cell transcripts after infection by Anaplasma phagocytophilum impacts a selective group of cellular programs	3.12
	Macrophage Ad5f35 M2 Challenge	3.1
	Transcriptome of Stabilin-1 siRNA transfected human monocytes	3.02
	Macrophage Ad5f35 PhenoMap	2.9
	Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos	2.85
	REPROGRAMMING IDENTIFIES FUNCTIONALLY DISTINCT STAGES OF CLONAL EVOLUTION IN MYELODYSPLASTIC SYNDROMES	2.84
	Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins	2.71
	Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B-cell Responses to Influenza Hemagglutinin	2.68
	Tri-mannose grafting of chitosan nanocarriers remodels the macrophage response to bacterial infection	2.65
	Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity	2.61
	Comparison of the transcriptome and chromatin state between human cord blood HSC and human iPSC derived hematopoietic progenitor using next-generation sequencing	2.55
	Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis	2.55
	Mutated H3 Histones Drive Human Pre-Leukemic Hematopoietic Stem Cell Expansion And Promote Leukemic Aggressiveness	2.53
	Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency	2.47
	Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells	2.39
	NAPRT activation of macrophages	2.3
	Gene expression profiling of patient's DCIS-IDC tandem lesions by RNA sequencing analysis	2.27
	Single cell transcriptome of peritoneal cells	2.22
	Absence of NKG2D ligands defines human leukaemia stem cells and mediates their immune evasion	2.13
	Time-dependent regulation of cellular programming of monocytes by NCOR2 [RNASeq_TK]	2.03
	Pluripotent stem cell models of Blau syndrome reveal an IFN-<gamma>-dependent inflammatory response in macrophages	2.0
	H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT]	2.0
	H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation	2.0
	Consequences of Ribosomal Protein Haploinsufficiency in Human Hematopoiesis	1.83
	RNA Sequencing Analysis of villus tissues from unexplained recurrent spontaneous abortion patients and controls with induced abortions	1.79
	Pain-driven transcriptome changes in synovium of knee osteoarthritis patients	1.79
	Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets (RNA-seq AML development)	1.78
	Transcriptome profiling of omental adipose tissues in human obesity by RNA-Seq	1.78
	A map of gene expression in neutrophil-like cell lines	1.69
	Apoptosis enhancing drugs overcome innate platinum resistance in CA125 negative tumor initiating populations of high grade serous ovarian cancer	1.66
	Transcriptome profiling of a mouse model of alveolar soft part sarcoma	1.56
	Human interleukin-4 treated regulatory macrophages promote epithelial wound healing and reduce colitis in an mouse model	1.55
	Sorted MDMs with RFP+GFP+ or RFP+GFP- Mtb	1.51
	Deep RNA sequencing of the human placental transcriptome	1.5
	Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma	1.47
	Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor [human RNA-seq]	1.4
	Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor.	1.4
	RNA sequencing of erythroid and granulomonocytic colonies differentiated from transduced bone marrow CD34+ cells expressing U2AF1 S34F mutation, U2AF1 wild-type or empty vector control	1.38
	Stranded RNA-seq were performed on total RNA following ribosomal RNAs depletion (Ribo-zero removal kit, illumina) for 3 brain , 8 IDHwt and 5 IDHmut glioma samples.	1.36
	Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics]	1.32
	EGFR Mutation Promotes Glioblastoma Through Epigenome and Transcription Factor Network Remodeling	1.24
	The Human Testis Cell Atlas via Single-cell RNA-seq (Healthy men scRNA-seq data set)	1.22
	Transcriptome wide analysis of classically and alternatively activated macrophages	1.21
	RNA-seq in endometrial stromal tumors	1.15
	The Glioma-Infiltrating T Cell Receptor Repertoire	1.14
	Human cells contain natural double-stranded RNAs with potential regulatory capacity	1.13
	Robust prediction of response to immune checkpoint blockade therapy in metastatic melanoma	1.13
	Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA_seq_Whole]	1.12
	Gene expression of collecting duct carcinoma of the kidney	1.11
	A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations	1.07
	Tissue-resident memory T cells mediate immune homeostasis in the human pancreas through the PD-1/PD-L1 pathway	1.06
	Transcriptomic profiles of nonpregnant and term pregnant human myometrial tissues	1.06
	Nonpregnant and term pregnant human myometrial tissues	1.06
	Transcriptome Profiling Reveals the key genes and pathways involved in polycystic ovary syndrome [RNA-seq]	1.01
	Identification of epigenetic interactions between miRNA and DNA methylation associated with polycystic ovarian syndrome	1.01
	RNAseq analysis of the human neutrophil transcriptome, with and without in vitro cytokine stimulation	1.0
	Novel Atherogenic Pathways from the Differential Transcriptiome Analysis of Diabetic Epicardial Adipose Tissue	0.98
	Transcriptomes in healthy and CHB fetal hearts	0.96
	Profiling of lung tumor-infiltrating CD8 T cells according to their expression status of CD39	0.93
	KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression	0.93
	Reprogrammed myeloid cell transcriptomes in NSCLC	0.88
	Generation of Patient-Matched Malignant and Normal Primary Cell Cultures from Clear Cell Renal Cell Carcinoma Patients	0.86
	Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages	0.84
	Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages	0.84
	Gene expression profile difference among renal location in a stone former	0.82
	Generation and functional characterization of MDSC-like cells	0.8
	Morphological and molecular characterization of human dermal lymphatic collectors	0.8
	RNA-Seq of the corpus callosum from 12 individuals	0.78
	Expression of the mannose receptor (CD206) defines distinct populations of human colonic macrophages in health and inflammatory bowel disease	0.78
	The Cushing's disease adipose gene expression profile reveals effects of long term glucocorticoids on adipose tissue lipid, protein and glucose metabolism	0.77
	Stem and effector CD8 T-cells from human cancers	0.77
	RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways	0.76
	De novo reconstruction of human adipose reveals conserved lncRNAs as regulators of brown adipogenesis	0.75
	Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell RNA-seq	0.74
	Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (mRNA-Seq)	0.72
	Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants	0.72
	Changes in CD34 and Erythroid Progenitor Transcriptome After RUNX3 Kock-down	0.71
	A novel CD4+ T cell population expanded in SLE blood provides B cell help through IL10 and succinate	0.68
	Differential gene expressions in the heart of hypertrophic cardiomyopathy patients	0.68
	iRNA-seq: Computational method for genome wide assessment of acute transcriptional regulation from total RNA-seq data	0.66
	RNA-sequencing of human tendon after injury	0.65
	Transcriptome analysis of human reninomas as an approach to understanding juxtaglomerular cell biology	0.63
	Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas	0.63
	Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration	0.62
	Agonistic targeting of TLR1/TLR2 induces p38 MAPK-dependent apoptosis and NfkB-dependent differentiation of AML cells	0.61
	The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-PBS / R-2HG treatment	0.6
	SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES	0.6
	SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES [RNA-seq]	0.6
	RNA-sequencing of highly pure synovial tissue macrophages reveals two distinct osteoarthritis subgroups that indicate different disease mechanisms.	0.6
	Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq)	0.6
	Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages	0.6
	Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells	0.59
	Transcriptome Profiling of Human Primary Monocytes	0.58
	Transcriptome analysis of eosinophilic and noneosinophilic chronic rhinosinusitis with nasal polyps reveals distinct lncRNA expression profiles	0.57
	Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma	0.56
	Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (RNA-Seq)	0.56
	Defective transcription elongation in a subset of cancers confers immunotherapy resistance	0.55
	REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set)	0.55
	REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease	0.55
	oxLDL exposed trained monocytes	0.54
	Transcriptomes of oxLDL exposed trained monocytes	0.54
	Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma using high throughput RNA sequencing	0.52
	Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1	0.52
	Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer	0.5
	Defective transcription elongation in a subset of cancers confers immunotherapy resistance (BGI12 RNA-Seq)	0.5
	Mycobacterium bovis Bacillus Calmette-Guerin (BCG) reprograms melanoma microenvironment to promote antitumor T cell responses	0.5
	Transcriptomic analysis of human macrophages in 3D	0.49
	Reducing the structure bias of RNA-Seq reveals a large number of non-annotated non-coding RNA	0.49
	Next Generation Sequencing Analysis of Colorectal Cancer Tissue Transcriptomes	0.48
	Gene expression profiling study by RNA-seq in PDX model based diffuse type gastric cancers.	0.47
	Transcriptomics profiles of patient-matched normal kidney and ccRCC pairs	0.47
	CD97 is a Critical Regulator of Acute Myeloid Leukemia Stem Cell Function	0.47
	Gene expression profile of human placenta from T. Cruzi infected mothers	0.46
	Gene Expression Signature in Adipose Tissue of Acromegaly Patients	0.45
	Immune-restricted epigenetic reader SP140 maintains macrophage identity and activation states critical to intestinal homeostasis [RNA-seq]	0.44
	Immune-restricted epigenetic reader SP140 maintains macrophage identity and activation states critical to intestinal homeostasis	0.44
	Transcriptome landscape of human primary monocytes response upon different ligand glucocorticoids	0.44
	Transcriptomic analysis of IPF lung-associated and normal peripheral blood T cells	0.43
	RNA-seq on Enasidenib or DMSO Treated CD71+ Cells from Umbilical Cord Blood (UCB)	0.42
	Identification of the networks that regulate human monocytic myeloid-derived suppressor cell differentiation into inflammatory macrophages	0.42
	The Human Testis Cell Atlas via Single-cell RNA-seq	0.4
	BACH2 in human plasma cell fate decision	0.39
	Enhancement of Human B Cell Differentiation and Function in Lymph Nodes by the TLR9 Agonist MGN1703	0.38
	Transcriptome profiling identified a 3-lncRNA regulatory network in transthyretin against glucose induced hRECs dysfunction	0.38
	Cyclophosphamide (CTX) Enhances Cancer Antibody Immunotherapy in the Resistant Bone Marrow Niche by Modulating Macrophage FcγR Expression	0.38
	The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas	0.38
	Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA-Seq]	0.38
	Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human]	0.37
	Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug	0.37
	Gene expression analysis of human CD8+ T cells treated with a DOT1L inhibitor	0.37
	RNA Sequencing of three pairs of gastric cancer	0.37
	Single cell analysis of smooth muscle cell phenotypic modulation in vivo during disease in mice and humans	0.37
	Single cell analysis of smooth muscle cell phenotypic modulation in vivo during disease in mice and humans [human scRNA-seq]	0.37
	Genomic profiling of human spermatogonial stem cells [BulkRNA-Seq]	0.37
	Non-IG Aberrations of FOXP1 in B-Cell Malignancies Lead to an Aberrant Expression of N-Truncated Isoforms of FOXP1	0.36
	Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity	0.36
	RNA-seq data from human SGBS adipocytes differentiated with marine oxohexadecenoic acids	0.35
	Generation of mature lung alveolar epithelial cells from human pluripotent stem cells	0.35
	Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas	0.35
	Hepatosplenic T cell lymphoma	0.35
	Integrative Genomic and Transcriptomic Analysis Identified Candidate Genes Implicated in the Pathogenesis of Hepatosplenic T-cell Lymphoma	0.35
	RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood	0.35
	eRNA: A graphic user interface-based tool for RNA sequencing data analysis	0.34
	eRNA: A graphic user interface-based tool for RNA sequencing data analysis [mRNA-Seq]	0.34
	Non-coding regions are the main source of tumor-specific antigens [human]	0.33
	Non-coding regions are the main source of tumor-specific antigens	0.33
	The serine hydroxymethyltransferase-2 (SHMT2) initiates lymphoma development through epigenetic tumor suppressor silencing.	0.33
	Gene expression profiling in follicular lymphoma (FL) samples and paired transformed follicular lymphoma (tFL) (n=6 samples)	0.33
	Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma [RNA-Seq; normal samples]	0.32
	RNA-seq of CD33 KO and control HSPCs	0.32
	Aortic Valve Tissue: Stenosis vs. Sclerosis	0.31
	A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors	0.31
	Gene Expression Profiling of Cutaneous CD30+ Lymphoproliferative Disorders by RNA-seq	0.31
	Widespread intronic polyadenylation diversifies immune cell transcriptomes	0.31
	Alarmin S100A11 initiates a chemokine response to the human pathogen Toxoplasma gondii	0.3
	Human optic chiasm from healthy controls and multiple sclerosis patients	0.3
	Multiple sclerosis and EAE	0.3
	RNA-sequencing of the human milk fat layer during colostrum, transitional, and mature stages of lactation	0.3
	Antibiotics induce polarization of pleural macrophages to M2-like phenotype in patients with tuberculous pleuritis	0.3
	Diarrhea in lymphocytic colitis: ERK1/2-dependent ENaC dysregulation and claudin-4-, -5- and -8-related barrier defects	0.3
	RNA-seq of human iPS derived macrophages with or without KLF1- transcription factor Activation	0.3
	Assessing placental maturity through histological and transcriptomic analyses in idiopathic spontaneous preterm birth	0.29
	Fibroblasts in cholesteatoma activate osteoclasts.	0.29
	Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes]	0.29
	Patient-derived xenograft models of non-small cell lung cancer for evaluating targeted drug sensitivity and resistance	0.29
	The gene expression profiles of gallbladder cancer	0.28
	Neural cell adhesion molecule 1 (NCAM1; CD56) promotes leukemogenesis and confers drug resistance in acute myeloid leukemia.	0.28
	Long noncoding RNA LNMAT1 promotes lymphatic metastasis in bladder cancer	0.27
	The transcriptome of Kawasaki Disease arteritis	0.26
	Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell type specificity	0.26
	Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes	0.26
	Expression profiling of lncRNAs, miRNAs and mRNAs and their differential expression in leiomyoma using next generation RNA sequencing	0.26
	Transcriptome analysis of human cumulus cells reveals hypoxia as the main determinant of follicular senescence.	0.26
	RNA-Seq and ATAC-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation	0.25
	RNA-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation	0.25
	Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP	0.25
	quanTIseq: quantifying immune contexture of human tumors	0.25
	Modeling the MYC-driven normal-to-tumour switch in breast cancer.	0.24
	MEIS1 regulates hematopoiesis in hPSCs	0.23
	Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy	0.23
	Leucegene: AML sequencing (part 6)	0.23
	RNAseq of PRMT4KD in human cord blood derived CD34+ cells	0.22
	mRNA expression profile of Lymphocytes	0.22
	Epigenomes and Transcriptomes of human monocytes from Hyper IgD Syndrome (HIDS) patients	0.22
	The pause-initiation limit restricts transcription activation in human cells	0.22
	The splicing factor RBM25 controls MYC activity in Acute Myeloid Leukemia	0.21
	PTEN interacts with the transcription machinery on chromatin and regulates RNA polymerase II-mediated transcription.[RNA-seq and ChIP-seq]	0.21
	PTEN interacts with the transcription machinery on chromatin and regulates RNA polymerase II-mediated transcription	0.21
	The role of antigen presenting cells in the induction of HIV-1 latency in resting CD4+ T-cells	0.21
	Identification of expressed and conserved human non-coding RNAs	0.21
	Immunoglobulin transcript sequence and somatic hypermutation computation from unselected RNA-seq reads in Chronic Lymphocytic Leukemia	0.2
	ZIKV infection of monocytes activates inflammasome pathways	0.2
	Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia	0.2
	Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (RNA-seq)	0.2
	Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide	0.2
	Reprogramming of Tumor-infiltrating Immune Cells in Early Stage of NSCLC	0.2
	LncRNA expression profiling of ischemic stroke patients	0.2
	Common inflammatory pathways between NEC and Crohn's disease	0.2
	Transcriptomes of human monocytes from patients with familial hypercholesterolemia before and after statin treatment	0.19
	Global epigenomic reconfiguration during mammalian brain development	0.19
	Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient	0.19
	Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle	0.19
	Interferon receptor signaling pathways regulating PD-L1 and PD-L2 expression	0.18
	CircRNAome diversity in human mature B-cells, T-cells and monocytes	0.18
	The Regulation of IFN Type I Pathway Related Genes RSAD2 and ETV7 Specifically Indicate Antibody-Mediated Rejection After Kidney Transplantation	0.18
	Potential signaling pathways and gene signatures associated with brain metastases in NSCLC patients	0.18
	Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy	0.18
	Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy [RNA-Seq]	0.18
	Long non-coding RNA expression profile associated with malignant progression of oral submucous fibrosis	0.18
	Transcriptomic profile of T cell acute lymphoblastic leukemia (T-ALL) cell from patients in CHCQMU	0.18
	A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism: Liver RNA profiles of lean non-diabetic, obese non-diabetic as well as obese diabetic humans.	0.17
	A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism.	0.17
	Transcriptome-wide analysis of adipose circular RNAs reveals their dynamic regulation in obesity and functional role in adipogenesis	0.17
	Connexin 32-mediated cell-cell communication is essential for hepatic differentiation from human embryonic stem cells	0.17
	Expression levels of genes of NKG2C+ NK cells after in vitro treatment	0.17
	Zoledronic acid inhibits NFAT and IL-2 signaling pathways in regulatory T cells and diminishes their suppressive function in patients with metastatic cancer	0.17
	cKIT+ sorted cells from 57-137 day old fetal testes and ovaries	0.17
	RNA-Seq of cKIT+ sorted cells from 53-137 day old fetal testes and ovaries and RNA-Seq of TRA-1-81+ H1 and UCLA1 hESCs.	0.17
	Interferon-beta-inducible genes in human monocyte-derived macrophages (MDMs)	0.17
	Effects of rFVIIIFc on human macrophages	0.17
	Expression of MERTK based on Multiple Sclerosis (MS) risk haplotype	0.17
	A novel tumor-associated myeloid cell population inhibits antigen-specific immune responses in cancer patients	0.17
	RNA-Seq analysis of human neutrophils isolated by different protocols (Polymorphprep and negative selection) and incubated with and without in vitro cytokine stimulation	0.17
	Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets	0.16
	Stage-specific regulation of the WNT/β-catenin pathway enhances differentiation of hESCs into hepatocytes	0.16
	Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals	0.15
	Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue	0.15
	Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls	0.15
	Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq]	0.15
	HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq]	0.15
	HEXIM1 is induced by DHODH inhibition to suppress melanoma	0.15
	Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing	0.15
	H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq]	0.15
	H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas	0.15
	Transcriptomic Analysis of Endothelial Cells from Fibrovascular Membranes in Proliferative Diabetic Retinopathy	0.15
	PRMT5 Interacts with the BCL6 Oncoprotein and is Required for Germinal Center Formation and Lymphoma Cell Survival	0.14
	Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells	0.14
	The mithralog EC-7072 is highly cytotoxic to chronic lymphocytic leukemia cells by targeting the B-cell receptor signaling pathway	0.14
	ChIP-seq and RNA-seq analysis of PRC2 core subunits in primary human erythroid progenitor cells	0.14
	RNA-seq transcriptional profiling in primary human erythroid progenitor cells upon shRNA-mediated knockdown of PRC2 core subunits	0.14
	Gastrointestinal Stromal Tumor Enhancers Support a Transcription Factor Network Predictive of Clinical Outcome	0.14
	Gastrointestinal Stromal Tumor Enhancers Support a Transcription Factor Network Predictive of Clinical Outcome	0.14
	RNA-Seq and expression data from human adipose tissue	0.14
	Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases	0.14
	Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation	0.14
	Neonatal and adult human testis defined at the single-cell level	0.13
	Transcriptomes of iPSC-derived and post-mortum Hypothalamus Neurons from obese and control donors	0.13
	Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (wtRNA-Seq)	0.13
	Analysis of the polyA+ RNA of LPS-treated human CD14+ monocytes	0.13
	Transcriptome profiles of moderate dysplasia in oral mucosa associated with malignant conversion	0.13
	Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid.	0.12
	Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells that Contribute to the Fibrous Cap	0.12
	Persistence of stem cell metabolism in cancers as a failure of differentiation	0.12
	Transcriptome of human white and brown adipose tissue biopsies	0.12
	RNA sequencing for lncRNA, miRNA and mRNA expression analysis in human laryngeal cancer	0.12
	Targeting Chromatin Regulators Inhibits Leukemogenic Gene Expression in NPM1 Mutant Leukemia	0.12
	mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs	0.12
	The role of TFEB in retinoid induced differentiation of NB4 APL leukemic cells (shTFEB)	0.12
	RNA-sequencing of human leukemia cells and mouse hematopoietic progenitors	0.12
	Genetic and pharmacological restoration of TET2 function blocks stem cell self-renewal and progression of leukemia	0.12
	A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development (HPC-5F RNAseq)	0.11
	Transcriptomes of human monocytes after ex vivo exposure to uric acid	0.11
	RNA-Sequencing shows novel transcriptomic signatures in failing and non-failing human heart	0.11
	Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors	0.11
	The Genomic Landscape of Atypical Fibroxanthoma	0.11
	RNA-Seq expression profiling of hepatocellular carcinoma and adjacent non-tumor liver tissues	0.11
	Allelic expression mapping across cell lineages reveal repressor disruption among disease SNPs	0.11
	Integrative analysis of mRNA and lncRNA profiles identified pathogenetic lncRNAs in esophageal squamous cell carcinoma	0.11
	Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis	0.11
	RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining	0.11
	Human ovarian granulosa cell transcriptome	0.11
	RNA-seq transcriptional profiling in human primary fetal and adult CD34+ hematopoietic stem/progenitor cells (HSPCs) erythroid progenitor cells (ProEs)	0.11
	Total RNA was extracted from three samples of CD33 CAR or control T cells from three different donors	0.11
	Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells	0.11
	The contribution of adenosine receptor 3-mediated signaling to TLR4-induced responses by human dendritic cells	0.1
	RNA-sequencing analysis of human fibrolamellar hepatocellular carcinoma and 4 maturational stages of the human hepatobiliary system	0.1
	Differentiation of human embryonic stem cells to HOXA+ hemogenic vasculature that resembles the aorta-gonad-mesonephros	0.1
	Human Treg NaCl stimulation	0.1
	Integrated Profiling of mRNAs and microRNAs to Identify Potential Biomarkers for Oral Malignant Transformation	0.1
	Integrated Profiling of mRNAs and microRNAs to Identify Potential Biomarkers for Oral Malignant Transformation [mRNA-Seq]	0.1
	RNA sequencing of bone marrow CD34+ cells from myelodysplastic syndrome patients with and without SF3B1 mutation and from healthy controls	0.1
	Differences in miRNA Detection Levels are Technology and Sequence Dependent	0.1
	Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS]	0.1
	Determination of tRNA aminoacylation levels by high throughput sequencing	0.1
	The DNA methylation landscape of human melanoma	0.1
	The DNA methylation landscape of human melanoma [RNA-Seq]	0.1
	RNA-seq expression data from EB-HSPC after AM580 treatment compated to DMSO-trated and FL-HSPCs	0.09
	RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV]	0.09
	Expression data from human perivascular stem cell-derived extracellular vesicles (PSC-EVs) and PSCs	0.09
	Molecular Hallmarks of Experimentally Acquired Immunity to Malaria [Pilot Study]	0.09
	RNA-Seq of Kaposi’s sarcoma reveal alterations in glucose and lipid metabolism	0.09
	PSEN1ΔE9, APPswe and APOE4 confer disparate phenotypes in human iPSC-derived microglia	0.09
	Analyses of a panel of transcripts and construction of RNA networks in hepatocellular carcinoma	0.09
	mRNA-sequencing of breast cancer subtypes and normal tissue	0.09
	Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training	0.09
	RNA-sequencing of bulk CD19+ Thymic B cells from mice and humans	0.09
	RNA-sequencing of bulk CD19+ Thymic B cells from young (3 month - 4 year) and old (42 - 61 years) humans	0.09
	Wnt1 silences CC/CXC motif chemokine genes in dendritic cells and induces adaptive immune resistance in lung adenocarcinoma	0.09
	Single-cell ID-seq identifies BMP signaling as a driver of a late stage epidermal differentiation program.	0.08
	Effect of BMP inhibition or stimulation of primary human keratinocytes	0.08
	Transcriptome analysis of virus infected tissues	0.08
	Expression analysis of primary human monocytes stimulated with an anti-TLR10 mAb (5C2C5)	0.08
	The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set)	0.08
	Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production	0.08
	Profiles of Long Noncoding RNAs in Human Naive and Memory T Cells	0.08
	A robust qualitative transcriptional signature for the early diagnosis of gastric cancer	0.08
	Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [RNA-Seq]	0.08
	Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches	0.08
	Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes	0.08
	Total RNA-Seq data from leukemic patients with complex structural variants	0.08
	Human Treg IL-12 stimulation	0.08
	Molecular analysis of renal cell carcinoma with unclassfied histology [gene expression]	0.07
	Molecular analysis of renal cell carcinoma with unclassfied histology	0.07
	RNA Missplicing in Fuchs Endothelial Corneal Dystrophy	0.07
	Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow	0.07
	RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs	0.07
	Integrative analysis of microRNAs and mRNAs in liver tissue and exosomes from blood of hepatitis C virus (HCV) related hepatocellular carcinoma (HCC) patient to identify biomarker and regulators of HCC [Total RNA-Seq]	0.07
	Integrative analysis of microRNAs and mRNAs in liver tissue and exosomes from blood of hepatitis C virus (HCV) related hepatocellular carcinoma (HCC) patient to identify biomarker and regulators of HCC	0.07
	Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules [gene expression]	0.07
	Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules	0.07
	Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion	0.07
	Direct in vivo evidence for B-cell receptor and NF-KB activation in mantle cell lymphoma: role of the lymph node microenvironment and activating mutations.	0.07
	Direct in vivo evidence for B-cell receptor and NF-KB activation in mantle cell lymphoma: role of the lymph node microenvironment and activating mutations. [RNA-Seq]	0.07
	RNA-sequencing of epicardial adipose tissue of patients with atrial fibrillation	0.07
	Transcriptomic analysis of frontal fibrosing alopecia	0.07
	Transcriptional changes in lymphoma cells induced by LSD1 depletion	0.07
	Histone demethylase LSD1 is required for germinal center formation and BCL6 driven lymphomagenesis	0.07
	Epigenomes and transcriptomes of human monocytes before and after in vivo exposure to Bacillus Calmette-Guérin vaccine	0.07
	Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq	0.06
	Transcriptomics profiling of CD141+ dendritic cells isolated from peripheral blood or synovial fluid of arthritis patients	0.06
	Characterization of Human Pegivirus Infection in Liver Transplantation Recipients	0.06
	CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells [RNA-Seq]	0.06
	CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells	0.06
	Gene expression profile of calcified and normal tricuspid aortic valves by RNA sequencing.	0.06
	Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability	0.06
	Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq]	0.06
	Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways	0.06
	RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21 [stranded]	0.06
	Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer	0.06
	Genome-wide expression from the esophageal biopsies of subjects with and without eosinophilic esophagitis	0.06
	Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients	0.06
	Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens	0.06
	Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR+ Populations with Stem Cell Properties	0.06
	Integrative analysis of RNA, translation and protein levels reveals distinct regulatory variation across humans	0.05
	RNA-sequencing of pediatric idiopathic dilated cardiomyopathy patients and healthy controls	0.05
	Novel kinase fusion oncogenes in post-Chernobyl radiation-induced pediatric thyroid cancers	0.05
	Aging-associated patterns in the expression of human endogenous retroviruses	0.05
	Differentially Expressed Genes for Atrial Fibrillation Identified using RNA Sequencing from Paired Human Left and Right Atrial Appendages.	0.05
	Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis	0.05
	Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes	0.05
	Identification and characterization of circular RNAs as a new class of putative biomarkers in human blood	0.05
	Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [RNA-Seq]	0.05
	Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [DNA Methylation]	0.05
	Trascriptome of thyroid cancer-induced macrophages	0.05
	Studying the selectivity of a targeted small molecule degrading a hypoxia-associated non-coding RNA	0.05
	Transcriptome of human ILC2s; primary vs IL-1b-primed	0.05
	Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver	0.04
	Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq]	0.04
	Neuronal Development And The Onset Of Electrical Activity In The Human Enteric Nervous System	0.04
	DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure	0.04
	Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [Primary RNA-Seq]	0.04
	Increased Neanderthal ancestry in genomic regions associated with lipid catabolism in contemporary Europeans	0.04
	Next generation sequencing of advanced non-castrate prostate cancer treated with docetaxel chemotherapy	0.04
	RNA sequencing data of whole blood cells of normal glucose tolerant (NGT) and gestational diabetes (GDM) pregnant women	0.04
	Integrated Multi-omic Analysis of Esthesioneuroblastomas Identifies Two Subgroups Linked to Cell Ontogeny	0.04
	Generation and persistence of human tissue-resident memory T cells in lung transplantation	0.04
	Role of cervicovaginal microbiota in genital inflammation	0.04
	Transcriptome of invasive mucinous adnocarcinoma of the lung and adjacent normal lung tissues from 6 patients based on RNA-seq method	0.04
	Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration	0.04
	Overexpression of ERG in cord blood progenitors promotes expansion and recapitulates molecular signatures of high ERG leukemias	0.04
	Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. Tested on 5 concentrations.	0.04
	Trans-differentiation of human adult peripheral blood T cells into neurons	0.04
	Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles	0.04
	Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq]	0.03
	Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH)	0.03
	Genome-wide profiling of cervical RNA-binding proteins identified HPV regulation of RNASEH2A expression by viral E7 and E2F1	0.03
	Gene expression profiling of human iPS cell-derived podocytes and sorted human adult podocytes	0.03
	RNA-seq in HT-29 colorectal cancer cells after F. nucleatum treatment	0.03
	CT Irradiation Induced Changes of Gene Expression within Peripheral Blood Cells	0.03
	Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA]	0.03
	Select correlative genes involved in pathogenesis of idiopathic interstitial pneumonia by high-throughput sequencing analysis	0.03
	Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma	0.03
	MALT1 Inhibition Is Efficacious in Both Naïve and Ibrutinib-Resistant Chronic Lymphocytic Leukemia.	0.03
	Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma	0.03
	Gene expression profiles of tumor-infiltrating CD8 T cells in hepatocellular carcinoma	0.03
	High-throughput RNA sequencing of human preovulatory cumulus and mural granulosa cells (mRNA)	0.03
	Small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genes	0.03
	Human Long Intergenic Noncoding RNA Linc-ADAL Knockdown in Mature Adipocytes using Lentiviral ShRNA	0.03
	Widespread regulated alternative splicing of single codons accelerates proteome evolution	0.03
	Alteration of the microRNA network during the progression of Alzheimer’s disease	0.03
	Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans.	0.02
	Cancer-Causing Mutations in SF3B1 Alter Splicing by Disrupting Interaction with SUGP1	0.02
	Identification of monocyte-like precursors of granulocytes as a mechanism for accumulation of PMN-MDSC in cancer	0.02
	Recovery and analysis of nascent RNA	0.02
	The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains	0.02
	CD133hi, Notchhi, DP (double positive) and DN (double negative) in GBML8 and GBML20, both patient-derived glioblastoma tumorsphere cultures	0.02
	Intrahepatic MAIT cell gene expression revealed by RNA-seq	0.02
	Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline	0.02
	RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with pancreatic carcinoma	0.02
	Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing	0.02
	Transcriptome of diurnal human blood neutrophils	0.02
	RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells	0.02
	Low carbohydrate diet study for non-alcoholic fatty liver disease patients	0.02
	Transcriptome analysis reveals differential splicing events in IPF lung tissue	0.02
	Identifying a novel candidate diagnostic and prognostic biomarker SPRR3 for oral squamous cell carcinoma via mRNA Sequencing and Bioinformatics	0.02
	RNAseq in Alzheimer's Disease patients	0.02
	The Genetic Landscape of Diamond-Blackfan Anemia	0.02
	The expression profiles of GBC liver metastasis	0.02
	Alterations of the MEK/ERK, BMP, and Wnt/b-catenin pathways detected in the blood of individuals with lymphatic malformations	0.02
	Human Treg IFNg/IL-10 subpopulations	0.02
	RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [TAV]	0.02
	APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa	0.02
	Innate-like activation of mucosal-associated invariant T cells in mycobacterial infection	0.02
	RNA expression profiles comparing primary and omental ovarian carcinoma samples	0.02
	Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses	0.02
	Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity	0.02
	RNA sequencing of lesional and nonlesional skin from patients with atopic dermatitis	0.01
	Gene Expression Profile of human hepatocellular carcinoma by RNA sequencing	0.01
	Browning of human adipocytes requires KLF11 and reprogramming of PPARγ super-enhancers	0.01
	Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype.	0.01
	Age-Related Gene Expression Changes in Prostate Cancer Patients	0.01
	Age-Related Gene Expression Changes in Prostate Cancer Patients [RNA-Seq]	0.01
	Characterization of human ILC2 subsets	0.01
	Genome wide impact of loss of mechanoluminal stimulation on neonatal intestine	0.01
	Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [RNA-seq]	0.01
	Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours	0.01
	A practical evaluation of alignment algorithms for RNA variant calling analysis	0.01
	RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21	0.01
	Transcriptome sequencing identify a recurrent CRYL1-IFT88 chimeric transcript in hepatocellular carcinoma	0.01
	A comprehensive gene expression analysis identifies novel immune signatures in cesarean-born infants	0.01
	Whole blood RNAseq from Generalised Pustular Psoriasis patients and healthy individuals	0.01
	RNA-sequencing	0.01
	Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq	0.01
	The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-Resistant, sensitive and healthy control	0.01
	The Wnt/β-catenin-signaling pathway is modulated by androgen ablation therapy for advanced clinical prostate cancer and contributes to androgen independent cell growth	0.01
	Studying the selectivity of a small molecule Synucleozid on transcriptome	0.01
	RNA-Seq in neutrophils from Antiphospholipid Syndrome	0.01
	A monocyte gene expression signature in the early clinical course of Parkinson’s disease	0.0
	Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease	0.0
	Genetic regulation of human adipose microRNA expression and its consequences for metabolic traits	0.0
	Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer	0.0
	Expression profiling by RNA-Seq of breast cancer samples from patients in walnut-consuming and control groups	0.0
	Genome-wide RNA-sequencing of human islets 48 hour after transduction with adenoviruses expressing either GFP (control), or histone chaperone ASF1B.	0.0
	Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid during virologically suppressed HIV	0.0
	Identification of differentially expressed circRNA in gallbladder cancer compared with matched normal tissue	0.0
	Anti-Inflammatory Effects of Budesonide in Human Fetal Lung	0.0

Identification of IL-27 as potent regulator of inflammatory osteolysis associated with vitamin E-blended ultra-high molecular weight polyethylene debris of orthopedic implants

155.81

Stimulation of isolated plasmacytoid dendritic cells (pDCs) with TLR9 agonist CpG C (CpG) and TLR7 agonist imiquimod (IMQ)

37.62

Transcriptomic insights into human decidual and peripheral blood CD4 T cells

31.39

Antibodies That Convert Bone Marrow Into Trafficking Microglia-Like Cells Reduce Brain Amyloid

30.84

Transcriptional profiling of microglia; current state of the art and future perspectives

23.38

Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases

22.32

Transcriptomic profiling of human CD34+ derived mast cells [RNA-Seq]

22.32

Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF

22.22

IFN-γ Represses M2 Gene Expression in Human Macrophages by Suppressing and Disassembling MAF-binding Enhancers [RNA-seq]

22.22

Functional studies of missense TREM2 mutations in human stem cell-derived microglia

18.55

CRIG identifies a novel population of highly phagocytic peritoneal macrophages associated with disease severity in patients with cirrhosis and ascites

17.09

RNA-seq analysis of activated plasmacytoid dendritic cell subsets after viral infection

16.75

TNF response in promyelocytic and granulocytic forms of HL60/S4 cells

13.58

Different Temporal Effects of Ebola Virus VP35 and VP24 Proteins on Global Gene Expression in Human Dendritic Cells

13.07

IL-6 augments IL-4-induced polarization of primary human macrophages through synergy of STAT3, STAT6 and BATF transcription factors

12.86

Transcriptomic profiling of human peripheral blood-derived mast cells

12.48

Genome-wide analyses of chromatin state in human mast cells reveal molecular drivers and mediators of allergic and inflammatory diseases

12.48

Efficient derivation of microglia-like cells from human pluripotent stem cells

12.47

Microglia innatly develop within cerebral organoids

12.2

RNA-Seq from human ILC transitional populations

11.35

Expression profiling of ILC transitional populations and Aiolos accessability and H3K27ac histone modifications in transfected MNK3 cells

11.35

JAK/STAT inhibition in macrophages promotes therapeutic resistance by inducing expression of protumorigenic factors

11.28

Transcriptional profiles of normal human mature B cells

11.15

AQP5-Expressing Cells Serve as Stem Cells and Cancer Origins in the Distal Stomach

11.03

RNA-seq of stable and unstable section of human atherosclerotic plaques

9.2

B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis

9.07

Gene expression profile of regenerated CD8αα T cells and CD8αβ T cells from LMP2 T-iPSCs

8.39

RNA sequencing based comparative analysis of human hepatic progenitor cells and their niche from alcoholic steatohepatitis livers

8.21

Catalogue of differentially expressed long non-coding RNAs following activation of human and mouse innate immunity

7.95

Transcriptomics of human macrophages upon infection with Legionella pneumophila and two isogenic mutants, LamA and AnkH using RNA-seq

7.52

Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) [RNA-seq]

7.47

Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10)

7.47

A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia

7.26

A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (RNA-seq)

7.26

Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia

6.94

Alternative classification of glioblastoma based on BUB1B-inhibition sensitivity

6.77

Non-inflammatory tumor microenvironment of Diffuse Intrinsic Pontine Glioma (DIPG)

6.02

Diverse and Targetable Kinase Alterations Drive Histiocytic Neoplasms

5.73

Human primary macrophages derived in vitro from circulating monocytes comprise adherent and non-adherent subsets with differential expression of Siglec-1 and CD4 and permissiveness to HIV-1 infection

5.19

The ribonuclease activity of SAMHD1 is required for HIV-1 restriction

5.04

Identification of renal resident macrophages across species

4.76

Chronic Myeloid Leukemia (CML), induced pluripotent stem cell (iPSC)-derived lin-CD34+CD45+ (iCD34) cell population

4.7

Gene expression profiling of human MSC-educated macrophages vs. classical macrophages from bone marrow and blood

4.37

Pluripotent stem cell model of Nakajo-Nishimura syndrome untangles proinflammatory pathways mediated by oxidative stress

4.19

Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma

4.13

RNA sequencing of human macrophages treated with iron chelator deferiprone (DEF), with and without lipopolysaccharide (LPS)

3.52

RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program (RNA-Seq)

3.47

RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program

3.47

Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas

3.42

Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq]

3.42

High-throughput sequencing of the human hepatic progenitor cell niche in PSC and HCV.

3.32

Transcriptomes of human monocytes and monocyte-derived macrophages with or without glucocorticoid treatment

3.29

Migration through a small pore disrupts inactive chromatin organisation in neutrophil-like cells [RNA-seq]

3.17

RNA-seq and Hi-C sequencing of neutrophil-like cells migrated through large or small pores

3.17

Alternative splicing of differentiated myeloid cell transcripts after infection by Anaplasma phagocytophilum impacts a selective group of cellular programs

3.12

Macrophage Ad5f35 M2 Challenge

3.1

Transcriptome of Stabilin-1 siRNA transfected human monocytes

3.02

Macrophage Ad5f35 PhenoMap

2.9

Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos

2.85

REPROGRAMMING IDENTIFIES FUNCTIONALLY DISTINCT STAGES OF CLONAL EVOLUTION IN MYELODYSPLASTIC SYNDROMES

2.84

Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins

2.71

Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B-cell Responses to Influenza Hemagglutinin

2.68

Tri-mannose grafting of chitosan nanocarriers remodels the macrophage response to bacterial infection

2.65

Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity

2.61

Comparison of the transcriptome and chromatin state between human cord blood HSC and human iPSC derived hematopoietic progenitor using next-generation sequencing

2.55

Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis

2.55

Mutated H3 Histones Drive Human Pre-Leukemic Hematopoietic Stem Cell Expansion And Promote Leukemic Aggressiveness

2.53

Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency

2.47

Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells

2.39

NAPRT activation of macrophages

2.3

Gene expression profiling of patient's DCIS-IDC tandem lesions by RNA sequencing analysis

2.27

Single cell transcriptome of peritoneal cells

2.22

Absence of NKG2D ligands defines human leukaemia stem cells and mediates their immune evasion

2.13

Time-dependent regulation of cellular programming of monocytes by NCOR2 [RNASeq_TK]

2.03

Pluripotent stem cell models of Blau syndrome reveal an IFN-<gamma>-dependent inflammatory response in macrophages

2.0

H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT]

2.0

H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation

2.0

Consequences of Ribosomal Protein Haploinsufficiency in Human Hematopoiesis

1.83

RNA Sequencing Analysis of villus tissues from unexplained recurrent spontaneous abortion patients and controls with induced abortions

1.79

Pain-driven transcriptome changes in synovium of knee osteoarthritis patients

1.79

Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets (RNA-seq AML development)

1.78

Transcriptome profiling of omental adipose tissues in human obesity by RNA-Seq

1.78

A map of gene expression in neutrophil-like cell lines

1.69

Apoptosis enhancing drugs overcome innate platinum resistance in CA125 negative tumor initiating populations of high grade serous ovarian cancer

1.66

Transcriptome profiling of a mouse model of alveolar soft part sarcoma

1.56

Human interleukin-4 treated regulatory macrophages promote epithelial wound healing and reduce colitis in an mouse model

1.55

Sorted MDMs with RFP+GFP+ or RFP+GFP- Mtb

1.51

Deep RNA sequencing of the human placental transcriptome

1.5

Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma

1.47

Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor [human RNA-seq]

1.4

Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor.

1.4

RNA sequencing of erythroid and granulomonocytic colonies differentiated from transduced bone marrow CD34+ cells expressing U2AF1 S34F mutation, U2AF1 wild-type or empty vector control

1.38

Stranded RNA-seq were performed on total RNA following ribosomal RNAs depletion (Ribo-zero removal kit, illumina) for 3 brain , 8 IDHwt and 5 IDHmut glioma samples.

1.36

Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics]

1.32

EGFR Mutation Promotes Glioblastoma Through Epigenome and Transcription Factor Network Remodeling

1.24

The Human Testis Cell Atlas via Single-cell RNA-seq (Healthy men scRNA-seq data set)

1.22

Transcriptome wide analysis of classically and alternatively activated macrophages

1.21

RNA-seq in endometrial stromal tumors

1.15

The Glioma-Infiltrating T Cell Receptor Repertoire

1.14

Human cells contain natural double-stranded RNAs with potential regulatory capacity

1.13

Robust prediction of response to immune checkpoint blockade therapy in metastatic melanoma

1.13

Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA_seq_Whole]

1.12

Gene expression of collecting duct carcinoma of the kidney

1.11

A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations

1.07

Tissue-resident memory T cells mediate immune homeostasis in the human pancreas through the PD-1/PD-L1 pathway

1.06

Transcriptomic profiles of nonpregnant and term pregnant human myometrial tissues

1.06

Nonpregnant and term pregnant human myometrial tissues

1.06

Transcriptome Profiling Reveals the key genes and pathways involved in polycystic ovary syndrome [RNA-seq]

1.01

Identification of epigenetic interactions between miRNA and DNA methylation associated with polycystic ovarian syndrome

1.01

RNAseq analysis of the human neutrophil transcriptome, with and without in vitro cytokine stimulation

1.0

Novel Atherogenic Pathways from the Differential Transcriptiome Analysis of Diabetic Epicardial Adipose Tissue

0.98

Transcriptomes in healthy and CHB fetal hearts

0.96

Profiling of lung tumor-infiltrating CD8 T cells according to their expression status of CD39

0.93

KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression

0.93

Reprogrammed myeloid cell transcriptomes in NSCLC

0.88

Generation of Patient-Matched Malignant and Normal Primary Cell Cultures from Clear Cell Renal Cell Carcinoma Patients

0.86

Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages

0.84

Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages

0.84

Gene expression profile difference among renal location in a stone former

0.82

Generation and functional characterization of MDSC-like cells

0.8

Morphological and molecular characterization of human dermal lymphatic collectors

0.8

RNA-Seq of the corpus callosum from 12 individuals

0.78

Expression of the mannose receptor (CD206) defines distinct populations of human colonic macrophages in health and inflammatory bowel disease

0.78

The Cushing's disease adipose gene expression profile reveals effects of long term glucocorticoids on adipose tissue lipid, protein and glucose metabolism

0.77

Stem and effector CD8 T-cells from human cancers

0.77

RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways

0.76

De novo reconstruction of human adipose reveals conserved lncRNAs as regulators of brown adipogenesis

0.75

Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell RNA-seq

0.74

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (mRNA-Seq)

0.72

Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants

0.72

Changes in CD34 and Erythroid Progenitor Transcriptome After RUNX3 Kock-down

0.71

A novel CD4+ T cell population expanded in SLE blood provides B cell help through IL10 and succinate

0.68

Differential gene expressions in the heart of hypertrophic cardiomyopathy patients

0.68

iRNA-seq: Computational method for genome wide assessment of acute transcriptional regulation from total RNA-seq data

0.66

RNA-sequencing of human tendon after injury

0.65

Transcriptome analysis of human reninomas as an approach to understanding juxtaglomerular cell biology

0.63

Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas

0.63

Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration

0.62

Agonistic targeting of TLR1/TLR2 induces p38 MAPK-dependent apoptosis and NfkB-dependent differentiation of AML cells

0.61

The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-PBS / R-2HG treatment

0.6

SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES

0.6

SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES [RNA-seq]

0.6

RNA-sequencing of highly pure synovial tissue macrophages reveals two distinct osteoarthritis subgroups that indicate different disease mechanisms.

0.6

Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq)

0.6

Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages

0.6

Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells

0.59

Transcriptome Profiling of Human Primary Monocytes

0.58

Transcriptome analysis of eosinophilic and noneosinophilic chronic rhinosinusitis with nasal polyps reveals distinct lncRNA expression profiles

0.57

Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma

0.56

Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (RNA-Seq)

0.56

Defective transcription elongation in a subset of cancers confers immunotherapy resistance

0.55

REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set)

0.55

REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease

0.55

oxLDL exposed trained monocytes

0.54

Transcriptomes of oxLDL exposed trained monocytes

0.54

Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma using high throughput RNA sequencing

0.52

Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1

0.52

Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer

0.5

Defective transcription elongation in a subset of cancers confers immunotherapy resistance (BGI12 RNA-Seq)

0.5

Mycobacterium bovis Bacillus Calmette-Guerin (BCG) reprograms melanoma microenvironment to promote antitumor T cell responses

0.5

Transcriptomic analysis of human macrophages in 3D

0.49

Reducing the structure bias of RNA-Seq reveals a large number of non-annotated non-coding RNA

0.49

Next Generation Sequencing Analysis of Colorectal Cancer Tissue Transcriptomes

0.48

Gene expression profiling study by RNA-seq in PDX model based diffuse type gastric cancers.

0.47

Transcriptomics profiles of patient-matched normal kidney and ccRCC pairs

0.47

CD97 is a Critical Regulator of Acute Myeloid Leukemia Stem Cell Function

0.47

Gene expression profile of human placenta from T. Cruzi infected mothers

0.46

Gene Expression Signature in Adipose Tissue of Acromegaly Patients

0.45

Immune-restricted epigenetic reader SP140 maintains macrophage identity and activation states critical to intestinal homeostasis [RNA-seq]

0.44

Immune-restricted epigenetic reader SP140 maintains macrophage identity and activation states critical to intestinal homeostasis

0.44

Transcriptome landscape of human primary monocytes response upon different ligand glucocorticoids

0.44

Transcriptomic analysis of IPF lung-associated and normal peripheral blood T cells

0.43

RNA-seq on Enasidenib or DMSO Treated CD71+ Cells from Umbilical Cord Blood (UCB)

0.42

Identification of the networks that regulate human monocytic myeloid-derived suppressor cell differentiation into inflammatory macrophages

0.42

The Human Testis Cell Atlas via Single-cell RNA-seq

0.4

BACH2 in human plasma cell fate decision

0.39

Enhancement of Human B Cell Differentiation and Function in Lymph Nodes by the TLR9 Agonist MGN1703

0.38

Transcriptome profiling identified a 3-lncRNA regulatory network in transthyretin against glucose induced hRECs dysfunction

0.38

Cyclophosphamide (CTX) Enhances Cancer Antibody Immunotherapy in the Resistant Bone Marrow Niche by Modulating Macrophage FcγR Expression

0.38

The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas

0.38

Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA-Seq]

0.38

Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human]

0.37

Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug

0.37

Gene expression analysis of human CD8+ T cells treated with a DOT1L inhibitor

0.37

RNA Sequencing of three pairs of gastric cancer

0.37

Single cell analysis of smooth muscle cell phenotypic modulation in vivo during disease in mice and humans

0.37

Single cell analysis of smooth muscle cell phenotypic modulation in vivo during disease in mice and humans [human scRNA-seq]

0.37

Genomic profiling of human spermatogonial stem cells [BulkRNA-Seq]

0.37

Non-IG Aberrations of FOXP1 in B-Cell Malignancies Lead to an Aberrant Expression of N-Truncated Isoforms of FOXP1

0.36

Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity

0.36

RNA-seq data from human SGBS adipocytes differentiated with marine oxohexadecenoic acids

0.35

Generation of mature lung alveolar epithelial cells from human pluripotent stem cells

0.35

Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas

0.35

Hepatosplenic T cell lymphoma

0.35

Integrative Genomic and Transcriptomic Analysis Identified Candidate Genes Implicated in the Pathogenesis of Hepatosplenic T-cell Lymphoma

0.35

RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood

0.35

eRNA: A graphic user interface-based tool for RNA sequencing data analysis

0.34

eRNA: A graphic user interface-based tool for RNA sequencing data analysis [mRNA-Seq]

0.34

Non-coding regions are the main source of tumor-specific antigens [human]

0.33

Non-coding regions are the main source of tumor-specific antigens

0.33

The serine hydroxymethyltransferase-2 (SHMT2) initiates lymphoma development through epigenetic tumor suppressor silencing.

0.33

Gene expression profiling in follicular lymphoma (FL) samples and paired transformed follicular lymphoma (tFL) (n=6 samples)

0.33

Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma [RNA-Seq; normal samples]

0.32

RNA-seq of CD33 KO and control HSPCs

0.32

Aortic Valve Tissue: Stenosis vs. Sclerosis

0.31

A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors

0.31

Gene Expression Profiling of Cutaneous CD30+ Lymphoproliferative Disorders by RNA-seq

0.31

Widespread intronic polyadenylation diversifies immune cell transcriptomes

0.31

Alarmin S100A11 initiates a chemokine response to the human pathogen Toxoplasma gondii

0.3

Human optic chiasm from healthy controls and multiple sclerosis patients

0.3

Multiple sclerosis and EAE

0.3

RNA-sequencing of the human milk fat layer during colostrum, transitional, and mature stages of lactation

0.3

Antibiotics induce polarization of pleural macrophages to M2-like phenotype in patients with tuberculous pleuritis

0.3

Diarrhea in lymphocytic colitis: ERK1/2-dependent ENaC dysregulation and claudin-4-, -5- and -8-related barrier defects

0.3

RNA-seq of human iPS derived macrophages with or without KLF1- transcription factor Activation

0.3

Assessing placental maturity through histological and transcriptomic analyses in idiopathic spontaneous preterm birth

0.29

Fibroblasts in cholesteatoma activate osteoclasts.

0.29

Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes]

0.29

Patient-derived xenograft models of non-small cell lung cancer for evaluating targeted drug sensitivity and resistance

0.29

The gene expression profiles of gallbladder cancer

0.28

Neural cell adhesion molecule 1 (NCAM1; CD56) promotes leukemogenesis and confers drug resistance in acute myeloid leukemia.

0.28

Long noncoding RNA LNMAT1 promotes lymphatic metastasis in bladder cancer

0.27

The transcriptome of Kawasaki Disease arteritis

0.26

Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell type specificity

0.26

Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes

0.26

Expression profiling of lncRNAs, miRNAs and mRNAs and their differential expression in leiomyoma using next generation RNA sequencing

0.26

Transcriptome analysis of human cumulus cells reveals hypoxia as the main determinant of follicular senescence.

0.26

RNA-Seq and ATAC-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation

0.25

RNA-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation

0.25

Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP

0.25

quanTIseq: quantifying immune contexture of human tumors

0.25

Modeling the MYC-driven normal-to-tumour switch in breast cancer.

0.24

MEIS1 regulates hematopoiesis in hPSCs

0.23

Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy

0.23

Leucegene: AML sequencing (part 6)

0.23

RNAseq of PRMT4KD in human cord blood derived CD34+ cells

0.22

mRNA expression profile of Lymphocytes

0.22

Epigenomes and Transcriptomes of human monocytes from Hyper IgD Syndrome (HIDS) patients

0.22

The pause-initiation limit restricts transcription activation in human cells

0.22

The splicing factor RBM25 controls MYC activity in Acute Myeloid Leukemia

0.21

PTEN interacts with the transcription machinery on chromatin and regulates RNA polymerase II-mediated transcription.[RNA-seq and ChIP-seq]

0.21

PTEN interacts with the transcription machinery on chromatin and regulates RNA polymerase II-mediated transcription

0.21

The role of antigen presenting cells in the induction of HIV-1 latency in resting CD4+ T-cells

0.21

Identification of expressed and conserved human non-coding RNAs

0.21

Immunoglobulin transcript sequence and somatic hypermutation computation from unselected RNA-seq reads in Chronic Lymphocytic Leukemia

0.2

ZIKV infection of monocytes activates inflammasome pathways

0.2

Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia

0.2

Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (RNA-seq)

0.2

Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide

0.2

Reprogramming of Tumor-infiltrating Immune Cells in Early Stage of NSCLC

0.2

LncRNA expression profiling of ischemic stroke patients

0.2

Common inflammatory pathways between NEC and Crohn's disease

0.2

Transcriptomes of human monocytes from patients with familial hypercholesterolemia before and after statin treatment

0.19

Global epigenomic reconfiguration during mammalian brain development

0.19

Genetic disarray follows mutant KLF1-E325K expression in a congenital dyserythropoietic anemia patient

0.19

Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle

0.19

Interferon receptor signaling pathways regulating PD-L1 and PD-L2 expression

0.18

CircRNAome diversity in human mature B-cells, T-cells and monocytes

0.18

The Regulation of IFN Type I Pathway Related Genes RSAD2 and ETV7 Specifically Indicate Antibody-Mediated Rejection After Kidney Transplantation

0.18

Potential signaling pathways and gene signatures associated with brain metastases in NSCLC patients

0.18

Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy

0.18

Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy [RNA-Seq]

0.18

Long non-coding RNA expression profile associated with malignant progression of oral submucous fibrosis

0.18

Transcriptomic profile of T cell acute lymphoblastic leukemia (T-ALL) cell from patients in CHCQMU

0.18

A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism: Liver RNA profiles of lean non-diabetic, obese non-diabetic as well as obese diabetic humans.

0.17

A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism.

0.17

Transcriptome-wide analysis of adipose circular RNAs reveals their dynamic regulation in obesity and functional role in adipogenesis

0.17

Connexin 32-mediated cell-cell communication is essential for hepatic differentiation from human embryonic stem cells

0.17

Expression levels of genes of NKG2C+ NK cells after in vitro treatment

0.17

Zoledronic acid inhibits NFAT and IL-2 signaling pathways in regulatory T cells and diminishes their suppressive function in patients with metastatic cancer

0.17

cKIT+ sorted cells from 57-137 day old fetal testes and ovaries

0.17

RNA-Seq of cKIT+ sorted cells from 53-137 day old fetal testes and ovaries and RNA-Seq of TRA-1-81+ H1 and UCLA1 hESCs.

0.17

Interferon-beta-inducible genes in human monocyte-derived macrophages (MDMs)

0.17

Effects of rFVIIIFc on human macrophages

0.17

Expression of MERTK based on Multiple Sclerosis (MS) risk haplotype

0.17

A novel tumor-associated myeloid cell population inhibits antigen-specific immune responses in cancer patients

0.17

RNA-Seq analysis of human neutrophils isolated by different protocols (Polymorphprep and negative selection) and incubated with and without in vitro cytokine stimulation

0.17

Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets

0.16

Stage-specific regulation of the WNT/β-catenin pathway enhances differentiation of hESCs into hepatocytes

0.16

Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals

0.15

Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue

0.15

Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls

0.15

Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq]

0.15

HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq]

0.15

HEXIM1 is induced by DHODH inhibition to suppress melanoma

0.15

Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing

0.15

H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq]

0.15

H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas

0.15

Transcriptomic Analysis of Endothelial Cells from Fibrovascular Membranes in Proliferative Diabetic Retinopathy

0.15

PRMT5 Interacts with the BCL6 Oncoprotein and is Required for Germinal Center Formation and Lymphoma Cell Survival

0.14

Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells

0.14

The mithralog EC-7072 is highly cytotoxic to chronic lymphocytic leukemia cells by targeting the B-cell receptor signaling pathway

0.14

ChIP-seq and RNA-seq analysis of PRC2 core subunits in primary human erythroid progenitor cells

0.14

RNA-seq transcriptional profiling in primary human erythroid progenitor cells upon shRNA-mediated knockdown of PRC2 core subunits

0.14

Gastrointestinal Stromal Tumor Enhancers Support a Transcription Factor Network Predictive of Clinical Outcome

0.14

Gastrointestinal Stromal Tumor Enhancers Support a Transcription Factor Network Predictive of Clinical Outcome

0.14

RNA-Seq and expression data from human adipose tissue

0.14

Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases

0.14

Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation

0.14

Neonatal and adult human testis defined at the single-cell level

0.13

Transcriptomes of iPSC-derived and post-mortum Hypothalamus Neurons from obese and control donors

0.13

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (wtRNA-Seq)

0.13

Analysis of the polyA+ RNA of LPS-treated human CD14+ monocytes

0.13

Transcriptome profiles of moderate dysplasia in oral mucosa associated with malignant conversion

0.13

Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid.

0.12

Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells that Contribute to the Fibrous Cap

0.12

Persistence of stem cell metabolism in cancers as a failure of differentiation

0.12

Transcriptome of human white and brown adipose tissue biopsies

0.12

RNA sequencing for lncRNA, miRNA and mRNA expression analysis in human laryngeal cancer

0.12

Targeting Chromatin Regulators Inhibits Leukemogenic Gene Expression in NPM1 Mutant Leukemia

0.12

mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs

0.12

The role of TFEB in retinoid induced differentiation of NB4 APL leukemic cells (shTFEB)

0.12

RNA-sequencing of human leukemia cells and mouse hematopoietic progenitors

0.12

Genetic and pharmacological restoration of TET2 function blocks stem cell self-renewal and progression of leukemia

0.12

A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development (HPC-5F RNAseq)

0.11

Transcriptomes of human monocytes after ex vivo exposure to uric acid

0.11

RNA-Sequencing shows novel transcriptomic signatures in failing and non-failing human heart

0.11

Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors

0.11

The Genomic Landscape of Atypical Fibroxanthoma

0.11

RNA-Seq expression profiling of hepatocellular carcinoma and adjacent non-tumor liver tissues

0.11

Allelic expression mapping across cell lineages reveal repressor disruption among disease SNPs

0.11

Integrative analysis of mRNA and lncRNA profiles identified pathogenetic lncRNAs in esophageal squamous cell carcinoma

0.11

Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis

0.11

RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining

0.11

Human ovarian granulosa cell transcriptome

0.11

RNA-seq transcriptional profiling in human primary fetal and adult CD34+ hematopoietic stem/progenitor cells (HSPCs) erythroid progenitor cells (ProEs)

0.11

Total RNA was extracted from three samples of CD33 CAR or control T cells from three different donors

0.11

Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells

0.11

The contribution of adenosine receptor 3-mediated signaling to TLR4-induced responses by human dendritic cells

0.1

RNA-sequencing analysis of human fibrolamellar hepatocellular carcinoma and 4 maturational stages of the human hepatobiliary system

0.1

Differentiation of human embryonic stem cells to HOXA+ hemogenic vasculature that resembles the aorta-gonad-mesonephros

0.1

Human Treg NaCl stimulation

0.1

Integrated Profiling of mRNAs and microRNAs to Identify Potential Biomarkers for Oral Malignant Transformation

0.1

Integrated Profiling of mRNAs and microRNAs to Identify Potential Biomarkers for Oral Malignant Transformation [mRNA-Seq]

0.1

RNA sequencing of bone marrow CD34+ cells from myelodysplastic syndrome patients with and without SF3B1 mutation and from healthy controls

0.1

Differences in miRNA Detection Levels are Technology and Sequence Dependent

0.1

Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS]

0.1

Determination of tRNA aminoacylation levels by high throughput sequencing

0.1

The DNA methylation landscape of human melanoma

0.1

The DNA methylation landscape of human melanoma [RNA-Seq]

0.1

RNA-seq expression data from EB-HSPC after AM580 treatment compated to DMSO-trated and FL-HSPCs

0.09

RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV]

0.09

Expression data from human perivascular stem cell-derived extracellular vesicles (PSC-EVs) and PSCs

0.09

Molecular Hallmarks of Experimentally Acquired Immunity to Malaria [Pilot Study]

0.09

RNA-Seq of Kaposi’s sarcoma reveal alterations in glucose and lipid metabolism

0.09

PSEN1ΔE9, APPswe and APOE4 confer disparate phenotypes in human iPSC-derived microglia

0.09

Analyses of a panel of transcripts and construction of RNA networks in hepatocellular carcinoma

0.09

mRNA-sequencing of breast cancer subtypes and normal tissue

0.09

Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training

0.09

RNA-sequencing of bulk CD19+ Thymic B cells from mice and humans

0.09

RNA-sequencing of bulk CD19+ Thymic B cells from young (3 month - 4 year) and old (42 - 61 years) humans

0.09

Wnt1 silences CC/CXC motif chemokine genes in dendritic cells and induces adaptive immune resistance in lung adenocarcinoma

0.09

Single-cell ID-seq identifies BMP signaling as a driver of a late stage epidermal differentiation program.

0.08

Effect of BMP inhibition or stimulation of primary human keratinocytes

0.08

Transcriptome analysis of virus infected tissues

0.08

Expression analysis of primary human monocytes stimulated with an anti-TLR10 mAb (5C2C5)

0.08

The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set)

0.08

Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production

0.08

Profiles of Long Noncoding RNAs in Human Naive and Memory T Cells

0.08

A robust qualitative transcriptional signature for the early diagnosis of gastric cancer

0.08

Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [RNA-Seq]

0.08

Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches

0.08

Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes

0.08

Total RNA-Seq data from leukemic patients with complex structural variants

0.08

Human Treg IL-12 stimulation

0.08

Molecular analysis of renal cell carcinoma with unclassfied histology [gene expression]

0.07

Molecular analysis of renal cell carcinoma with unclassfied histology

0.07

RNA Missplicing in Fuchs Endothelial Corneal Dystrophy

0.07

Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow

0.07

RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs

0.07

Integrative analysis of microRNAs and mRNAs in liver tissue and exosomes from blood of hepatitis C virus (HCV) related hepatocellular carcinoma (HCC) patient to identify biomarker and regulators of HCC [Total RNA-Seq]

0.07

Integrative analysis of microRNAs and mRNAs in liver tissue and exosomes from blood of hepatitis C virus (HCV) related hepatocellular carcinoma (HCC) patient to identify biomarker and regulators of HCC

0.07

Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules [gene expression]

0.07

Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules

0.07

Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion

0.07

Direct in vivo evidence for B-cell receptor and NF-KB activation in mantle cell lymphoma: role of the lymph node microenvironment and activating mutations.

0.07

Direct in vivo evidence for B-cell receptor and NF-KB activation in mantle cell lymphoma: role of the lymph node microenvironment and activating mutations. [RNA-Seq]

0.07

RNA-sequencing of epicardial adipose tissue of patients with atrial fibrillation

0.07

Transcriptomic analysis of frontal fibrosing alopecia

0.07

Transcriptional changes in lymphoma cells induced by LSD1 depletion

0.07

Histone demethylase LSD1 is required for germinal center formation and BCL6 driven lymphomagenesis

0.07

Epigenomes and transcriptomes of human monocytes before and after in vivo exposure to Bacillus Calmette-Guérin vaccine

0.07

Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq

0.06

Transcriptomics profiling of CD141+ dendritic cells isolated from peripheral blood or synovial fluid of arthritis patients

0.06

Characterization of Human Pegivirus Infection in Liver Transplantation Recipients

0.06

CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells [RNA-Seq]

0.06

CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells

0.06

Gene expression profile of calcified and normal tricuspid aortic valves by RNA sequencing.

0.06

Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability

0.06

Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq]

0.06

Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways

0.06

RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21 [stranded]

0.06

Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer

0.06

Genome-wide expression from the esophageal biopsies of subjects with and without eosinophilic esophagitis

0.06

Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients

0.06

Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens

0.06

Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR+ Populations with Stem Cell Properties

0.06

Integrative analysis of RNA, translation and protein levels reveals distinct regulatory variation across humans

0.05

RNA-sequencing of pediatric idiopathic dilated cardiomyopathy patients and healthy controls

0.05

Novel kinase fusion oncogenes in post-Chernobyl radiation-induced pediatric thyroid cancers

0.05

Aging-associated patterns in the expression of human endogenous retroviruses

0.05

Differentially Expressed Genes for Atrial Fibrillation Identified using RNA Sequencing from Paired Human Left and Right Atrial Appendages.

0.05

Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis

0.05

Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes

0.05

Identification and characterization of circular RNAs as a new class of putative biomarkers in human blood

0.05

Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [RNA-Seq]

0.05

Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [DNA Methylation]

0.05

Trascriptome of thyroid cancer-induced macrophages

0.05

Studying the selectivity of a targeted small molecule degrading a hypoxia-associated non-coding RNA

0.05

Transcriptome of human ILC2s; primary vs IL-1b-primed

0.05

Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver

0.04

Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq]

0.04

Neuronal Development And The Onset Of Electrical Activity In The Human Enteric Nervous System

0.04

DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure

0.04

Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [Primary RNA-Seq]

0.04

Increased Neanderthal ancestry in genomic regions associated with lipid catabolism in contemporary Europeans

0.04

Next generation sequencing of advanced non-castrate prostate cancer treated with docetaxel chemotherapy

0.04

RNA sequencing data of whole blood cells of normal glucose tolerant (NGT) and gestational diabetes (GDM) pregnant women

0.04

Integrated Multi-omic Analysis of Esthesioneuroblastomas Identifies Two Subgroups Linked to Cell Ontogeny

0.04

Generation and persistence of human tissue-resident memory T cells in lung transplantation

0.04

Role of cervicovaginal microbiota in genital inflammation

0.04

Transcriptome of invasive mucinous adnocarcinoma of the lung and adjacent normal lung tissues from 6 patients based on RNA-seq method

0.04

Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration

0.04

Overexpression of ERG in cord blood progenitors promotes expansion and recapitulates molecular signatures of high ERG leukemias

0.04

Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. Tested on 5 concentrations.

0.04

Trans-differentiation of human adult peripheral blood T cells into neurons

0.04

Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles

0.04

Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq]

0.03

Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH)

0.03

Genome-wide profiling of cervical RNA-binding proteins identified HPV regulation of RNASEH2A expression by viral E7 and E2F1

0.03

Gene expression profiling of human iPS cell-derived podocytes and sorted human adult podocytes

0.03

RNA-seq in HT-29 colorectal cancer cells after F. nucleatum treatment

0.03

CT Irradiation Induced Changes of Gene Expression within Peripheral Blood Cells

0.03

Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA]

0.03

Select correlative genes involved in pathogenesis of idiopathic interstitial pneumonia by high-throughput sequencing analysis

0.03

Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma

0.03

MALT1 Inhibition Is Efficacious in Both Naïve and Ibrutinib-Resistant Chronic Lymphocytic Leukemia.

0.03

Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma

0.03

Gene expression profiles of tumor-infiltrating CD8 T cells in hepatocellular carcinoma

0.03

High-throughput RNA sequencing of human preovulatory cumulus and mural granulosa cells (mRNA)

0.03

Small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genes

0.03

Human Long Intergenic Noncoding RNA Linc-ADAL Knockdown in Mature Adipocytes using Lentiviral ShRNA

0.03

Widespread regulated alternative splicing of single codons accelerates proteome evolution

0.03

Alteration of the microRNA network during the progression of Alzheimer’s disease

0.03

Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans.

0.02

Cancer-Causing Mutations in SF3B1 Alter Splicing by Disrupting Interaction with SUGP1

0.02

Identification of monocyte-like precursors of granulocytes as a mechanism for accumulation of PMN-MDSC in cancer

0.02

Recovery and analysis of nascent RNA

0.02

The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains

0.02

CD133hi, Notchhi, DP (double positive) and DN (double negative) in GBML8 and GBML20, both patient-derived glioblastoma tumorsphere cultures

0.02

Intrahepatic MAIT cell gene expression revealed by RNA-seq

0.02

Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline

0.02

RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with pancreatic carcinoma

0.02

Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing

0.02

Transcriptome of diurnal human blood neutrophils

0.02

RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells

0.02

Low carbohydrate diet study for non-alcoholic fatty liver disease patients

0.02

Transcriptome analysis reveals differential splicing events in IPF lung tissue

0.02

Identifying a novel candidate diagnostic and prognostic biomarker SPRR3 for oral squamous cell carcinoma via mRNA Sequencing and Bioinformatics

0.02

RNAseq in Alzheimer's Disease patients

0.02

The Genetic Landscape of Diamond-Blackfan Anemia

0.02

The expression profiles of GBC liver metastasis

0.02

Alterations of the MEK/ERK, BMP, and Wnt/b-catenin pathways detected in the blood of individuals with lymphatic malformations

0.02

Human Treg IFNg/IL-10 subpopulations

0.02

RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [TAV]

0.02

APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa

0.02

Innate-like activation of mucosal-associated invariant T cells in mycobacterial infection

0.02

RNA expression profiles comparing primary and omental ovarian carcinoma samples

0.02

Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses

0.02

Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity

0.02

RNA sequencing of lesional and nonlesional skin from patients with atopic dermatitis

0.01

Gene Expression Profile of human hepatocellular carcinoma by RNA sequencing

0.01

Browning of human adipocytes requires KLF11 and reprogramming of PPARγ super-enhancers

0.01

Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype.

0.01

Age-Related Gene Expression Changes in Prostate Cancer Patients

0.01

Age-Related Gene Expression Changes in Prostate Cancer Patients [RNA-Seq]

0.01

Characterization of human ILC2 subsets

0.01

Genome wide impact of loss of mechanoluminal stimulation on neonatal intestine

0.01

Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [RNA-seq]

0.01

Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours

0.01

A practical evaluation of alignment algorithms for RNA variant calling analysis

0.01

RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21

0.01

Transcriptome sequencing identify a recurrent CRYL1-IFT88 chimeric transcript in hepatocellular carcinoma

0.01

A comprehensive gene expression analysis identifies novel immune signatures in cesarean-born infants

0.01

Whole blood RNAseq from Generalised Pustular Psoriasis patients and healthy individuals

0.01

RNA-sequencing

0.01

Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq

0.01

The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-Resistant, sensitive and healthy control

0.01

The Wnt/β-catenin-signaling pathway is modulated by androgen ablation therapy for advanced clinical prostate cancer and contributes to androgen independent cell growth

0.01

Studying the selectivity of a small molecule Synucleozid on transcriptome

0.01

RNA-Seq in neutrophils from Antiphospholipid Syndrome

0.01

A monocyte gene expression signature in the early clinical course of Parkinson’s disease

0.0

Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease

0.0

Genetic regulation of human adipose microRNA expression and its consequences for metabolic traits

0.0

Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer

0.0

Expression profiling by RNA-Seq of breast cancer samples from patients in walnut-consuming and control groups

0.0

Genome-wide RNA-sequencing of human islets 48 hour after transduction with adenoviruses expressing either GFP (control), or histone chaperone ASF1B.

0.0

Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid during virologically suppressed HIV

0.0

Identification of differentially expressed circRNA in gallbladder cancer compared with matched normal tissue

0.0

Anti-Inflammatory Effects of Budesonide in Human Fetal Lung

0.0

Gene Query: GPR34

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