|
Exogenous pyruvate represses histone gene expression to inhibit cancer cell proliferation via the NAMPT-NAD + -SIRT1 pathway |
33.87 |
|
RNA-seq analysis of control and ZC3H18-depleted ovarian cancer cells |
14.56 |
|
Triplet nucleotide repeat-based siRNAs are highly toxic to cancer cells |
11.25 |
|
KSDM1b Role in Ewing Sarcoma |
10.02 |
|
Activation of the p53 transcriptional program sensitizes cancer cells to Cdk7 inhibitors |
8.91 |
|
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response |
7.27 |
|
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) |
7.17 |
|
Transcriptional landscape changes during human embryonic stem cell derivation |
6.97 |
|
H3B-8800, a novel oral splicing modulator, induces lethality in spliceosome mutant cancers [K562] |
6.58 |
|
RNAseq analysis of ESRP regulated splicing events in prostate cancer |
6.32 |
|
Transcriptomic analysis of effect of oncolytic measles virus (MV) on transformed and non-transformed bone marrow-derived mesenchymal stem cells (MSCs) |
6.28 |
|
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells |
6.26 |
|
SETDB1 compacts the inactive X chromosome in part through silencing an enhancer in the IL1RAPL1 gene |
6.16 |
|
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development |
6.05 |
|
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq] |
6.05 |
|
Next Generation Sequencing Facilitates Quantitative Analysis of HIV-1 Latency in Central Memory T Cells |
5.88 |
|
CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair |
5.85 |
|
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] |
5.81 |
|
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells |
5.81 |
|
RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons |
5.8 |
|
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age |
5.66 |
|
Comparative whole-transcriptomic analysis between normal and AKAP-Lbc-depleted human embryonic stem cells |
5.65 |
|
TGF-β regulation of miRNA expression in pancreatic cancer |
5.57 |
|
Transcriptional Modulation of Human Endogenous Retroviruses in Primary CD4+ T Cells Following Vorinostat Treatment |
5.56 |
|
Single-cell transcriptomics of the human placenta: inferring the cell communication network of the maternal-fetal interface |
5.34 |
|
Mitotically associated long non-coding RNA, MANCR regulates cell cycle in triple negative breast cancer cells |
5.3 |
|
Aging Human Hematopoietic Stem Cells Manifest Profound Epigenetic Reprogramming of Enhancers That May Predispose to Leukemia (RNA-seq of KLF6 KO) |
5.21 |
|
Impact of ETV7 activity on interferon-stimulated gene expression in 293T cells treated with interferon alpha |
5.0 |
|
ETV7 and interferon response |
5.0 |
|
A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance |
4.91 |
|
Overexpression of UGT2B17 in MEC1 and JVM2 leukemia cell lines |
4.87 |
|
Supraphysiological Androgens Repress Prostate Cancer Growth and Induce DNA Damage Augmented by PARP Inhibition |
4.85 |
|
24hr CA treatment vs. DMSO in HCT116 cells (from 'Identification of CDK8 and CDK19 substrates in human cells using cortistatin A and quantitative phosphoproteomics') |
4.83 |
|
Mining the stiffness-sensitive transcriptome in human vascular smooth muscle cells identifies long non-coding RNA stiffness regulators |
4.76 |
|
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites |
4.68 |
|
AZ1366: An inhibitor of tankyrase and the canonical Wnt pathway that limits the persistence of non-small cell lung cancer cells following EGFR inhibition |
4.64 |
|
ELF4 is a target of miR-124 and promotes neuroblastoma proliferation and undifferentiated state |
4.59 |
|
RNA-Seq analysis of 4N and 2N RPE1 cells following polyploid induction via cytokinesis failure or Aurora kinase inhibition [tpo3] |
4.55 |
|
p38 SAPK and SKIIP induced changes in alternative splicing patterns upon osmostress |
4.44 |
|
Treatment of multiple myeloma cells with EZH2 small molecule inhibitor |
4.43 |
|
PTBP1 excludes UPF1 to protect long 3'UTRs from nonsense-mediated mRNA decay |
4.42 |
|
Genome-wide transcriptome analysis of NIPBL iPSC and commited cardiomyoctes |
4.38 |
|
G9a-Mediated Methylation of ERα Links the PHF20/MOF Histone Acetyltransferase Complex to Hormonal Gene Expression |
4.36 |
|
RNAseq Study in CC-671 Treated Cal-51 Cells |
4.34 |
|
A Unique Epigenomic Landscape Defines Human Erythropoiesis (RNA-seq) |
4.24 |
|
A Unique Epigenomic Landscape Defines Human Erythropoiesis |
4.24 |
|
RNA-seq data from human lymphoma cell lines |
4.2 |
|
ChIP-seq and RNA-seq from human lymphoma cell lines |
4.2 |
|
Response of HEK293 Freestyle cells to 36 h of culture in Zn(II)-depleted Freestyle medium |
4.19 |
|
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition |
4.17 |
|
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [RNA-Seq] |
4.17 |
|
Isolation and Transcriptome Analyses of Human Erythroid Progenitors: BFU-E and CFU-E |
4.16 |
|
Hijacking of stress response machinery by oncogenes in acute leukaemia [RNA-seq] |
4.15 |
|
Hijacking of stress response machinery by oncogenes in acute leukaemia |
4.15 |
|
mRNA cap methyltransferase, RNMT-RAM, promotes RNA pol II transcription |
4.13 |
|
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq |
4.12 |
|
Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-dependent neurodegeneration |
4.05 |
|
RNA-Seq analysis RPE1 cells following exposure to Nutlin-3 to identify target genes of p53 [tpo12] |
4.05 |
|
Modulation of gene transcription and epigenetics of colon carcinoma cells by bacterial membrane vesicles |
4.04 |
|
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells |
4.02 |
|
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples |
4.0 |
|
Activating PAX Gene Family Paralogs to Complement PAX5 Leukemia Driver Mutations |
4.0 |
|
Downregulation of DDX5/DDX17 and REST |
3.98 |
|
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer |
3.97 |
|
LNCaP treated with iBET |
3.94 |
|
FMRP facilitates the nuclear export of N6-methyladenosine-containing mRNAs |
3.92 |
|
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HET] |
3.89 |
|
Next Generation Sequencing upon siRNA-mediated knockdown of EIF5A in MCF-7 cells. |
3.88 |
|
Regulation of protein translation during mitosis |
3.86 |
|
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development |
3.85 |
|
Cancer avatars derived from genetically engineered pluripotent stem cells allow for longitudinal assessment of tumor development |
3.83 |
|
Distinct gene expression profile of Huh7 cell lines stably overexpressing CRABP1 or 2 |
3.83 |
|
Major hnRNP proteins act as general TDP-43 functional modifiers both in Drosophila and human neuronal cells. |
3.79 |
|
RNAseq of PRMT4KD in human cord blood derived CD34+ cells |
3.78 |
|
ARS2 is a general suppressor of pervasive transcription [RNAseq] |
3.78 |
|
The Human Testis Cell Atlas via Single-cell RNA-seq |
3.75 |
|
Messenger RNA expression after silencing or inhibition of MEN1in MCF-7 breast cancer cells |
3.74 |
|
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients |
3.69 |
|
TRIM28 interacts with EZH2 and SWI/SNF to activate genes that promote mammosphere formation |
3.65 |
|
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [RNA-Seq] |
3.63 |
|
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer |
3.63 |
|
Splicing function of mitotic regulators links R-loop mediated DNA damage to tumor cell killing |
3.63 |
|
A novel CRISPR-engineered prostate cancer cell line defines the AR-V transcriptome and identifies PARP inhibitor sensitivities. |
3.6 |
|
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia |
3.6 |
|
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia [RNA-seq] |
3.6 |
|
Transcriptional profile of CAOV2 ovarian cancer cells with TAZ silencing |
3.57 |
|
Analysis of regulatory element evolution between human and mouse reveals a lack of cis-trans compensation |
3.55 |
|
Oncogenic MYC induces a dependency on the spliceosome in human cancer |
3.53 |
|
Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples |
3.52 |
|
Single-cell transcription profiling in KS1 patient iPSCs and NPCs |
3.52 |
|
Developmental stage specific chromosome architecture in human erythroid cells (RNA-seq) |
3.51 |
|
Developmental stage specific chromosome architecture in human erythroid cells |
3.51 |
|
PolyA+ RNA-seq in ALL-SIL upon TLX1 knockdown |
3.51 |
|
RNA-Seq to assess the transcriptional effects of G quadruplex stabilization by the G4 ligand PhenDC3 in HT-1080 cells |
3.48 |
|
A sister of NANOG regulates genes expressed in pre-implantation human development |
3.45 |
|
A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (RNA-seq) |
3.44 |
|
A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia |
3.44 |
|
hnRNP L protects mRNAs from nonsense-mediated mRNA decay |
3.43 |
|
A SRp55-regulated alternative splicing network controls pancreatic beta cell survival and function |
3.41 |
|
A role for p53 in the adaptation to glutamine starvation through the expression of Slc1a3 |
3.38 |
|
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) |
3.36 |
|
Characterization of human CDK12 and CDK13 in the regulation of RNA processing |
3.35 |
|
SLIGRL-induced gene expression changes in NHEK cells |
3.32 |
|
RNAseq Analysis in glioblastoma cells treated with Mepazine |
3.32 |
|
IDH3a KO RNA-seq |
3.32 |
|
Codon usage optimization in pluripotent embryonic stem cells [RNA-seq] |
3.31 |
|
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression |
3.3 |
|
HBEC-shp53-PCHD7 |
3.29 |
|
The Molecular Dissection of the Oncogenic Role of ETS1 in the Mesenchymal Subtypes of Head and Neck Squamous Cell Carcinoma [RNA-seq knock-down] |
3.29 |
|
Quantitative Analysis of PPARD Transcriptomes in Colon Cancer Cells by Next Generation Sequencing (NGS) |
3.21 |
|
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation [bulk] |
3.17 |
|
The regulation of ferroptosis by TAZ in epithelial ovarian cancer |
3.16 |
|
H3B-8800, a novel oral splicing modulator, induces lethality in spliceosome mutant cancers [Nalm-6] |
3.09 |
|
Paxillin regulates genomic networks in prostate cancer [LNCaP] |
3.08 |
|
Biosynthesis of histone messenger RNA employs a specific 3' end endonuclease |
3.08 |
|
Identification of transcripts altered upon LIN-41 knockdown in human embryonic stem cells |
3.06 |
|
N6-methyladenosine Recruits HNRNPG for Alternative Splicing Regulation |
3.05 |
|
CD95L derived si- and shRNAs and the CD95L mRNA kill cancer cells through an RNAi mechanism by targeting survival genes [siL3.RNAseq.lg] |
3.04 |
|
CRISPR activation of long non-coding RNAs transiently expressed during cortical neuron differentiation associated with Field, et al, Stem Cell Reports 2018 |
3.03 |
|
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes |
3.03 |
|
RNA-sequencing transcriptome profiling of normal human keratinocytes differentiation |
3.0 |
|
Inducible three-factor direct reprogramming to nephron progenitors using piggyBac transposons |
2.99 |
|
Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD) |
2.99 |
|
Comparative transcriptomic analysis of human and Drosophila extracellular vesicles reveals extensive conservation |
2.96 |
|
Transcriptional profile of human STAT1-/- fibroblasts expressing LY6E or empty control vector |
2.96 |
|
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] |
2.92 |
|
Effects of Polybrominated Diphenyl Ether (PBDE) Mixture on estrogen receptor positive (ER+) patient-derived tumor xenograft (PDX) model |
2.91 |
|
LncRNA-GAS5 negative regulation of YAP-target genes expression |
2.89 |
|
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo |
2.88 |
|
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes |
2.87 |
|
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] |
2.87 |
|
Transcriptome Analysis of CircMRPS35 mediated mRNA expression profiles |
2.87 |
|
Genome-wide expression change by SHARPIN knockdown in MCF-7 cells |
2.86 |
|
PolyA-sequencing in IMR-32 cells treated with THZ531 or DMSO |
2.86 |
|
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene |
2.86 |
|
ILF2 Regulates RNA Splicing of DNA Damage Response Genes to Confer Poor Prognosis in 1q21-Amplified Multiple Myeloma |
2.81 |
|
Promoter of lncRNA gene *PVT1* is a tumor suppressor DNA element |
2.8 |
|
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and PVT1 Knockdown by CRISPRi in MDA-MB-231 human breast cancer cell line |
2.8 |
|
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression |
2.76 |
|
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia revealed by RNA-sequencing. |
2.75 |
|
The Human Testis Cell Atlas via Single-cell RNA-seq (Healthy men scRNA-seq data set) |
2.73 |
|
Differential expression of genes in AD169-infected MRC5. |
2.73 |
|
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury [human iPS] |
2.69 |
|
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury |
2.69 |
|
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes |
2.66 |
|
Impact of dieldrin on transcription in Jurkat T cells |
2.65 |
|
RNA sequencing of matched nephrectomy samples [RNA-seq] |
2.64 |
|
Genome-wide maps of H3K36me3 in ccRCC and RNA-seq of matched nephrectomy samples |
2.64 |
|
Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 |
2.63 |
|
An Argonaute phosphorylation cycle promotes microRNA-mediated silencing [whole transcriptome RNA-seq] |
2.61 |
|
RNA sequencing of ESC/iPSC-derived purified PAX6-GFP neural progenitors form control and Phelan-Mcdermid patients |
2.61 |
|
FMRP-associated MOV10 facilitates and antagonizes miRNA-mediated regulation |
2.6 |
|
Analysis of HPV16 E2 host gene expression using TERT immortalized keratinocytes (NOKs) cell lines and RNA-sequencing |
2.6 |
|
Analysis of transcriptome changes following SOX2 knockdown in three different Ewing sarcoma cell lines |
2.6 |
|
GIST cell cycle dysregulation is required for progression to high-risk disease but not for resistance to kinase inhibitors |
2.59 |
|
Effect of 48h treatment with 100nM GSK2879552 on T-ALL cell lines LOUCY and PEER |
2.58 |
|
Transcriptome Sequencing of Adipose-Derived Mesechymal Stromal Cells |
2.55 |
|
RNA-Seq profiling of day 7 and day 18 kidney organoids differentiated in two batches |
2.52 |
|
mRNA sequencing of the global effect of SOX2 on gene expression in hESC and hESC derived NPCs. |
2.51 |
|
Knockdown of ADNP in HCT116 colon cancer cells |
2.49 |
|
Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells |
2.49 |
|
FBXW7 modulates stress response by post-translational modification of HSF1 |
2.46 |
|
Transriptional profiling upon heat shock and recovery in cells deficient for FBXW7 and their wild type counterpart. |
2.46 |
|
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes |
2.44 |
|
Targeting the androgen receptor N-terminus via the cochaperone Bag-1L [RNA-Seq KO] |
2.44 |
|
RNA-seq of naive and primed ES cells (NHSM) |
2.42 |
|
UMI-count modeling and differential expression analysis for single-cell RNA sequencing |
2.42 |
|
Splicing towards noncoding isoforms in colorectal carcinoma is associated with tumor hypoxia and the DNA damage response |
2.41 |
|
SNHG5 siRNA knock down in HCT116 cells |
2.4 |
|
Perlman syndrome nuclease DIS3L2 controls cytoplasmic non-coding RNAs and provides surveillance pathway for maturing snRNAs |
2.4 |
|
GREB1 amplifies androgen receptor output in prostate cancer and contributes to antiandrogen resistance |
2.4 |
|
Identification of global regulators of T-helper cell lineage specification (RNA-Seq) |
2.39 |
|
Identification of global regulators of T-helper cell lineage specification |
2.39 |
|
MYCL and EP400 are required for Max and MCPyV mediated gene activation |
2.39 |
|
ATF4 inhibition by p62 represses stromal metabolic reprogramming and tumorigenesis II |
2.38 |
|
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [RNA-Seq2] |
2.37 |
|
Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cell Lines |
2.37 |
|
CENPA-Bound Genes and Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cells |
2.37 |
|
β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer |
2.37 |
|
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation |
2.36 |
|
The landscape of alternative splicing in aggressive prostate cancers |
2.36 |
|
Generation of Brain Region-specific Organoids using a Miniaturized Spinning Bioreactor and Modelling ZIKV Exposure |
2.35 |
|
High Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML |
2.35 |
|
A non-catalytic function of carbonic anhydrase IX contributes to the glycolytic phenotype and pH regulation in human breast cancer cells |
2.35 |
|
Lyophilized human cells stored at room temperature preserve multiple RNA species at excellent quality for RNA sequencing |
2.32 |
|
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines |
2.31 |
|
A Novel PI3K Regulator, ARID4B, Presents Synthetic Essentiality in PTEN-deficient Prostate Cancer |
2.31 |
|
A Novel PI3K Regulator, ARID4B, Presents Synthetic Essentiality in PTEN-deficient Prostate Cancer [RNA-seq] |
2.31 |
|
CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation |
2.3 |
|
BRD9 defines a novel SWI/SNF sub-complex and constitutes a specific vulnerability in malignant rhabdoid tumors |
2.28 |
|
Low-Cell-Number, Single-Tube Amplification (STA) of RNAs Revealed miRNA Changes from Pluripotency to Endothelium |
2.27 |
|
E2F1 orchestrates transcriptomics and oxidative metabolism in Wharton’s jelly derived mesenchymal stem cells from growth-restricted neonates |
2.26 |
|
Transcriptome of iPSC-derived Neural Cells with Heterozygous Knockout in CHD8 |
2.25 |
|
Allelic expression mapping across cell lineages reveal repressor disruption among disease SNPs |
2.25 |
|
MPTAC determines APP fragmentation via sensing sulfur amino acid catabolism |
2.24 |
|
Pseudouridylation of tRNA-derived fragments steers translation control in stem cells [Polysome-Seq] |
2.24 |
|
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells (RNA-seq) |
2.24 |
|
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells |
2.24 |
|
Bi-allelic Alteration and Dysregulation of the Hippo Pathway in Mucinous Tubular and Spindle Cell Carcinoma of the Kidney |
2.23 |
|
RNA-Seq Samples of siTFE3 in 8988T PDA Cell Line to Investigate Transcriptional Control of the Autophagy-Lysosome System |
2.22 |
|
Click chemistry enables comprehensive preclinical evaluation of targeted epigenetic therapies [RNA-seq] |
2.22 |
|
Click chemistry enables comprehensive preclinical evaluation of targeted epigenetic therapies |
2.22 |
|
Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. |
2.21 |
|
Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. |
2.21 |
|
XPO1 inhibition antagonizes MCL via nuclear retention of IkB: Selinexor demonstrates antitumor activities in both ibr-sensitive and ibr-resistant tumor cells |
2.21 |
|
RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected EVT cells |
2.19 |
|
Differential expression analysis of RNA-seq data from melanocytes driven by tumor cell-derived exosomes |
2.19 |
|
|
2.16 |
|
miRNA-1343 attenuates pathways of fibrosis by targeting the TGF-beta receptors [RNA-seq] |
2.16 |
|
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation |
2.15 |
|
Genistein and bisphenol A exposure cause estrogen receptor 1 to bind thousands of binding sites in a cell type-specific manner |
2.15 |
|
Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events |
2.14 |
|
Inhibition of TNBC metastasis by Gpx1 |
2.14 |
|
LIN28A Over-expression RNAseq |
2.13 |
|
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues |
2.12 |
|
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues (sequencing) |
2.12 |
|
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of H1, H1 derived APLNR+ cells, CD31+CD34+ cells and CD43+ cells during human early hematopoietic differentiation |
2.11 |
|
Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy |
2.11 |
|
The E3 ubiquitin ligase HectD1 suppresses EMT and metastasis by targeting the +TIP protein ACF7 for degradation |
2.11 |
|
A recessive form of hyper-IgE syndrome by disruption of ZNF341-dependent STAT3 transcription and activity |
2.09 |
|
The LIN28B/let-7 axis is a novel therapeutic pathway in Multiple Myeloma |
2.09 |
|
Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide |
2.08 |
|
Exploiting Prmt5-orchestrated intron detention signatures to treat splicing-addicted malignant glioma tumors |
2.08 |
|
High-efficiency RNA-based reprogramming of human primary fibroblasts |
2.02 |
|
CXCR4 is a host factor that regulates Plasmodium development in hepatocytes |
2.01 |
|
Nudt3 is a mRNA Decapping Enzyme That Modulates Cell Migration |
2.0 |
|
Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration |
1.99 |
|
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription |
1.96 |
|
Systematic discovery of endogenous human ribonucleoprotein complexes |
1.96 |
|
Knockout human reveal an essential role for Paternally Expressed 10 (PEG10) in JEG3 cell line development |
1.96 |
|
Transcriptional regulation in pluripotent stem cells by Methyl CpG binding protein 2 (MeCP2) |
1.95 |
|
Gene expression, methylome and splicing of THP-1 monocytic cells and THP-1-derived macrophage |
1.94 |
|
HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq] |
1.93 |
|
HEXIM1 is induced by DHODH inhibition to suppress melanoma |
1.93 |
|
Distinct structural classes of activating FOXA1 alterations in prostate cancer progression |
1.93 |
|
Distinct structural classes of activating FOXA1 alterations in prostate cancer progression [RNA-Seq] |
1.93 |
|
ARID1A and ARID1B loss in HCT116 and TOV21G cells |
1.92 |
|
Modeling genome-wide transcriptional cis-regulation in n LNCaP-abl cell line after siRNA knock down of a series of gene factors [RNA-seq] |
1.91 |
|
Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during Epithelial-to-Mesenchymal Transition [ESRP KD] |
1.9 |
|
Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells |
1.89 |
|
FOXA1 upregulation promotes enhancer and transcriptional reprogramming in endocrine-resistant breast cancer [RNA-seq] |
1.89 |
|
FOXA1 upregulation promotes enhancer and transcriptional reprogramming in endocrine-resistant breast cancer |
1.89 |
|
JAG1 Mediated Notch Signaling Regulates Secretory Cell Differentiation of the Human Airway Epithelium |
1.89 |
|
The hepatitis C viral protein NS5A stabilizes growth-regulatory human transcripts |
1.88 |
|
The cohesin complex prevents Myc-induced replication stress |
1.88 |
|
SHQ1 regulation of RNA splicing is required for T-lymphoblastic leukemia cell survival |
1.87 |
|
RNA sequencing of mechanically strained NHEKs and control NHEKs |
1.87 |
|
Differential YAP expression in glioma cells induces cell competition and promotes tumorigenesis |
1.87 |
|
Huntingtin aggregation impairs autophagy leading to Argonaute-2 accumulation and global microRNA dysregulation |
1.87 |
|
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator [RNA-seq] |
1.86 |
|
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator |
1.86 |
|
Post-transcriptional manipulation of TERC reverses molecular hallmarks of telomere disease |
1.86 |
|
Biological effect of chronic mistranslation in mammalian cells |
1.86 |
|
Differentially expressed genes post knock down of lincDUSP26 |
1.85 |
|
The cohesin release factor WAPL restricts chromatin loop extension. [RNA-Seq] |
1.85 |
|
The cohesin release factor WAPL restricts chromatin loop extension. |
1.85 |
|
RNA-seq of resting and activated CD4+ T cells +-JQ1 |
1.85 |
|
Identification of the O-GlcNAc-regulated alternative splicing events by performing RNA sequencing on HeLa cells with altered O-GlcNAc level. |
1.84 |
|
ARID1A is a critical regulator of luminal identity and therapeutic response in oestrogen receptor-positive breast cancer (RNA-Seq) |
1.84 |
|
U2AF1 mutations alter splice site recognition in hematological malignancies |
1.83 |
|
Genome models integrating chromatin contacts and nuclear lamin-genome interactions reveal implications of laminopathy-causing lamin mutations on genome architecture |
1.82 |
|
Next Generation Sequencing Facilitates Quantitative Analysis of Human Primary and Pluripotent Stem Cell-Derived Epicardial Cell Transcriptomes |
1.82 |
|
Human pluripotent stem cell-derived brain tumor model uncovered embryonic stem cell signature as a key driver in atypical teratoid/rhabdoid tumor (RNA-Seq) |
1.81 |
|
A bioinformatics approach reveals novel mechanisms of the OVOL transcription factors in the regulation of epithelial-mesenchymal cell programming and cancer progression. |
1.81 |
|
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 |
1.8 |
|
Antiviral innate immunity of hepatitis C virus-infected stem cell-derived hepatocytes |
1.79 |
|
ICE1 promotes the link between splicing and nonsense-mediated mRNA decay |
1.79 |
|
Inhibition of TAZ contributes radiation-induced senescence and growth arrest in glioma cells |
1.76 |
|
CNOT1 and Transcriptomic Landscape of a HeLa Cell Line |
1.71 |
|
Expression profile of HNF1A knockdown and overexpression in 22RV1 and LNCaP cells respectively |
1.7 |
|
Parkinson’s Disease Genetic Risk in a Midbrain Neuronal Cell Line |
1.7 |
|
Transcriptome wide analysis of translation efficiency in MCF7 cells using polysome profiling with and without eIF4A inhibition by hippuristanol treatment |
1.69 |
|
RNA-sequencing of human mammary epithelial cells (HMLEs) engineered to express either ER or ER-SOX4 with and without 4-OHT to induce nuclear translocation |
1.69 |
|
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells |
1.68 |
|
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells [GRO-seq] |
1.68 |
|
Quantitative mass spectrometry-based proteomics reveals the dynamic protein landscape during initiation of human Th17 cell polarization |
1.67 |
|
RelA mutants 'reconstituted' and cell cycle synchronized HCT116 Colorectal Cancer Cells |
1.67 |
|
The MLL-AF9 and MLL-AF4 oncofusion proteins bind a distinct enhancer repertoire and target the RUNX1 program in MLLr AML |
1.67 |
|
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) |
1.64 |
|
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion |
1.64 |
|
Smad5 acts as an intracellular pH messenger and maintains bioenergetic homoeostasis |
1.64 |
|
The conserved transcriptional landscapes in human spermatogenesis |
1.64 |
|
Epigenetic siRNA and chemical screens identify SETD8 inhibition as a new therapeutic strategy of p53 reactivation in high-risk Neuroblastoma. |
1.63 |
|
FOXP2's impact on the primate transcriptome |
1.62 |
|
Targeting the androgen receptor N-terminus via the cochaperone Bag-1L [RNA-seq C-terminal mutant] |
1.62 |
|
Heterogeneous effects of massive hypoxia pathway activation in kidney cancer |
1.62 |
|
Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells that Contribute to the Fibrous Cap |
1.62 |
|
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase |
1.62 |
|
Impact of GDF15 expression of ovarian cancer cell on stroma and Cisplatin responses |
1.61 |
|
Interactions of aCPs with Cytosine-rich Polypyrimidine Tracts Enhance Splicing of Cassette Exons |
1.6 |
|
Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing [RNA-Seq] |
1.59 |
|
Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing |
1.59 |
|
Divergent effects of eRF3 and Upf1 on the expression of uORF carrying mRNAs and ribosome protein genes |
1.59 |
|
Selective expression of long non-coding RNAs in a breast cancer cell progression model |
1.58 |
|
Splicing and epigenetic factors jointly regulate epidermal differentiation |
1.57 |
|
Integrin αvβ3 acting as membrane receptor for thyroid hormones mediates angiogenesis in malignant T cells |
1.57 |
|
DNMT1-associated long non-coding RNA regulate global gene expression and DNA methylation in colon cancer |
1.56 |
|
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq SS] |
1.55 |
|
Studying the selectivity of a small molecule Synucleozid on transcriptome |
1.54 |
|
The splicing factor RBM25 controls MYC activity in Acute Myeloid Leukemia |
1.54 |
|
Epigenome Editing by a CRISPR/Cas9-Based Acetyltransferase Activates Genes from Promoters and Enhancers |
1.53 |
|
Long non-coding RNAs are central regulators of the IL-1b-induced inflammatory response in human lung fibroblasts |
1.51 |
|
Transcriptome profiling of hnRNP A2/B1 and A1 depleted cells |
1.51 |
|
Tumor hypoxia causes DNA hypermethylation by reducing TET activity |
1.5 |
|
Tumor hypoxia causes DNA hypermethylation by reducing TET activity (RNA-Seq) |
1.5 |
|
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation |
1.49 |
|
Dnmt3a and Dnmt3b associate with enhancers to regulate human epidermal stem cell homeostasis |
1.49 |
|
Epigenetic Lanscape and BRD4 Transcriptional Dependency of PAX3-FOXO1 Driven Rhabdomyosarcoma |
1.49 |
|
PAX3-FOXO1 requires BRD4 to drive oncogene addiction in RMS cells [RNA-seq] |
1.49 |
|
transcriptomic profiling of HEK293 cells upon individual knockdown of the splicing factors RBM17, U2SURP or CHERP |
1.48 |
|
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors |
1.47 |
|
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_RNA-seq] |
1.46 |
|
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation |
1.46 |
|
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) |
1.46 |
|
Effect of from Human Umbilical Vein Endothelial Cells |
1.45 |
|
RNA sequencing reveals transcriptional changes after Hippo signaling activation in podocytes |
1.45 |
|
Three congruent human Schwann cell models of CMT1A reveal a converged phenotype |
1.43 |
|
Integrin signaling regulates YAP/TAZ to control skin homeostasis |
1.43 |
|
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells |
1.41 |
|
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells [Endoderm RNA-seq and ChIP-seq data sets] |
1.41 |
|
Ultracentifugation and nanoscale deterministic lateral displacement (nanoDLD) of samples for exRNA analysis |
1.4 |
|
Total RNA was extracted from three samples of CD33 CAR or control T cells from three different donors |
1.4 |
|
Impact of library preparation on downstream analysis and interpretation of RNA-seq data: comparison between Illumina PolyA and NuGEN Ovation protocol |
1.39 |
|
SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer |
1.39 |
|
Single-Cell RNA Sequencing Reveals Metallothionein Heterogeneity during hESC Differentiation to Definitive Endoderm [RNA-Seq] |
1.38 |
|
AKAP8 inhibits tumor metastasis by antagonizing EMT-associated RNA alternative splicing |
1.35 |
|
Cistromic re-programming by truncating GATA3 mutations promotes mesenchymal transformation in vitro, but not mammary tumour formation in mice [RNA-seq] |
1.32 |
|
Cistromic re-programming by truncating GATA3 mutations promotes mesenchymal transformation in vitro, but not mammary tumour formation in mice |
1.32 |
|
6mer seed toxicity in tumour suppressive microRNAs |
1.31 |
|
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] |
1.3 |
|
FUS KO mRNA sequencing and anti-FUS RNA immunoprecipitation sequencing |
1.3 |
|
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation |
1.3 |
|
ZRANB2 and SYF2 mediated splicing programs converging on ECT2 are involved in breast cancer cell resistance to doxorubicin |
1.28 |
|
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq] |
1.28 |
|
Human cells contain natural double-stranded RNAs with potential regulatory capacity |
1.27 |
|
Mutational landscape of splicing genes and functional consequences across 33 cancer types |
1.27 |
|
Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development |
1.27 |
|
Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [RNA-seq] |
1.27 |
|
Developing a Novel Two-Dimensional Culture System to Enrich Human Prostate Luminal Progenitors That Can Function as a Cell of Origin for Prostate Cancer |
1.25 |
|
ZEB1 insufficiency causes corneal endothelial cell state transition and altered cellular processing |
1.22 |
|
Gene expression profiling study by RNA-seq in PDX model based diffuse type gastric cancers. |
1.22 |
|
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer |
1.2 |
|
Transcriptome-wide analysis links the short-term expression of the b isoforms of T-cell intracellular antigens to protective proteostasis-mediated survival and quiescence |
1.2 |
|
Gene expression from AsPC-1 cells treated with PTC596 and DMSO |
1.2 |
|
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo [RNA-Seq] |
1.19 |
|
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo |
1.19 |
|
Transcriptomic analysis to functionally map the intrinsically disordered domain of EWS/FLI [Experiment 1] |
1.17 |
|
Prolyl hydroxylation regulates protein degradation, synthesis, and splicing in human induced pluripotent stem cell-derived cardiomyocytes |
1.17 |
|
Hepatitis C virus functionally sequesters miR-122 |
1.17 |
|
Hepatitis C virus functionally sequesters miR-122 [RNA-Seq] |
1.17 |
|
Regulation of mRNA half-life by an inhibitor of human decapping enzyme Dcp2 following transcription shutoff in HEK293T cells |
1.15 |
|
The identification of RBM47 binding sites and RBM47-dependent alternative splicing events in brain metastatic breast cancer cells |
1.14 |
|
Identification of alternatively spliced transcripts in brain metastatic derivatives of MDA-MB-231 breast cancer cells in response to RBM47 expression |
1.14 |
|
A High-Throughput Screen Identifies DYRK inhibitor ID-8 that Stimulates Human Kidney Tubular Proliferation |
1.14 |
|
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process |
1.14 |
|
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process (RNA-seq) |
1.14 |
|
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies [RNA-seq data set 2] |
1.12 |
|
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. |
1.12 |
|
Transcriptome of human keratinocytes with or without HPV16 oncogene expression |
1.11 |
|
Role of FGFR1 in neuronal devlopment |
1.11 |
|
ChIPseq and RNAseq analysis of T47D cells with/without silencing TRPS1/CHD4 |
1.09 |
|
RNA-seq of HEK293T cells overexpressing TET1-FL or TET1-ALT |
1.05 |
|
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells |
1.05 |
|
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection |
1.05 |
|
Transcriptional profiling of JEG3 cells with HLA-G ablation via deletion of Enhancer L |
1.02 |
|
A cell-permeable stapled peptide inhibitor of the estrogen receptor/coactivator interaction |
1.02 |
|
Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors |
1.01 |
|
Simultaneous detection and relative quantification of coding and non-coding RNA using a single sequencing reaction |
1.01 |
|
T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment |
1.0 |
|
Gene expression in TAL1-driven T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment |
1.0 |
|
C9orf72 Intermediate Repeats are Associated with Corticobasal Degeneration, Increased C9orf72 Expression and Disruption of Autophagy |
0.99 |
|
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 |
0.99 |
|
Wide-scale analysis of alternative polyadenylation (APA) associated with proliferation and transformation using 3'-Seq |
0.99 |
|
Global loss of epigenetic and transcriptional fidility defines a subclass of cancer with immunotherapy resistance |
0.98 |
|
Domain-focused CRISPR-screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells |
0.98 |
|
An epigenetic mark of polycomb response elements implemented by Trx/MLL/COMPASS |
0.97 |
|
Comprehensive analysis of microRNA expression in regionalized human neural progenitor cells reveals microRNA-10 as a caudalizing factor |
0.95 |
|
Joint-specific DNA transcriptome signatures in rheumatoid arthritis [RNA-seq] |
0.93 |
|
Controlling for gene expression changes in transcription factor protein networks. |
0.93 |
|
Microenvironmental-derived Regulation of HIF-Signaling Drives Transcriptional Heterogeneity in Glioblastoma Multiforme |
0.93 |
|
Molecular Criteria for Defining the Naive Human Pluripotent State |
0.89 |
|
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling |
0.88 |
|
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling (RNA-seq) |
0.88 |
|
MYC interacts with the G9a histone methyltransferase to drive transcriptional repression and tumorigenesis |
0.88 |
|
Gene expression changes due to PARP knockdown in human cells |
0.87 |
|
K562 polyA RNA-Seq |
0.86 |
|
Exploring the gene expression profile upon FXR1 knockdown in H358 cells using RNA-seq |
0.86 |
|
Cooperation of Nutlin-3a and a Wip1 inhibitor to induce p53 activity |
0.85 |
|
Identification of long noncoding RNAs in T-ALL cell lines |
0.85 |
|
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu |
0.85 |
|
RNA G-quadruplexes mark repressive upstream open reading frames in human mRNAs |
0.83 |
|
Derivation of kidney organoids from human pluripotent stem cells [RNA-Seq: Data Set 1] |
0.83 |
|
Epigenetic reprogramming of melanoma cells by vitamin C treatment |
0.81 |
|
CD8+ T cells regulate tumor ferroptosis during cancer immunotherapy |
0.81 |
|
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays |
0.78 |
|
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation I |
0.78 |
|
Disease modelling of core pre-mRNA splicing factor haploinsufficiency |
0.77 |
|
Next generation sequencing of the transcriptome in MCF-7 cells with/without SRA knockdown |
0.76 |
|
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells |
0.75 |
|
BASP1 modifies the Tamoxifen response |
0.75 |
|
Cooperation of dominant oncogenes with regulatory variants shapes clinical outcomes in pediatric cancer |
0.73 |
|
RNA-seq of three Ewing sarcoma cell lines (A673, SK-N-MC, RDES), transfected with either siControl or siMYBL2. |
0.73 |
|
The transcriptome effect of overexpressing EZH2 in MCF7 |
0.73 |
|
The immediate impact of exoribonucleolysis on nuclear RNA processing, turnover and transcriptional control revealed by rapid depletion of DIS3, EXOSC10 or XRN2 from human cells |
0.72 |
|
A Non-Canonical Nuclear Activity Triggered by Small RNAs and Argonaute Proteins in Human Cells |
0.71 |
|
Global transcriptome analysis in the MYCN-amplified neuroblastoma cell line IMR5-75 upon inducible MYCN-knockdown |
0.71 |
|
DLX3-dependent p53 signaling network controls keratinocyte cell cycle and squamous tumor growth |
0.65 |
|
DLX3 alters transcriptomic profile of adhesion, cell cycle, and cell death in Squamous Cell Carcinoma Cells |
0.65 |
|
Real-time observation of light-controlled transcription in living cells |
0.62 |
|
Luminal subtype-specific circRNAs in breast cancer cells by a novel tool for external data analysis. |
0.62 |
|
Identification of differentially spliced genes by wild type or S34F mutation of U2AF1 |
0.6 |
|
Class I histone deacetylases HDAC1, 2 and 3 are histone decrotonylases |
0.59 |
|
Effect of PRDM11 depletion in U2932 cells |
0.58 |
|
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes |
0.57 |
|
Xeno-free and Chemically Defined Human System for Culturing Human Epidermal Keratinocytes |
0.57 |
|
Functional TRIM24 degraders via conjugation of ineffectual bromodomain and VHL ligands [RNA-seq] |
0.57 |
|
Identification of global XBP1s target gene expression in human prostate cancer cells |
0.55 |
|
Identifying transcripts that are transcriptinoally regulated by CBFB and RUNX1 using RNAseq |
0.55 |
|
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships |
0.55 |
|
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) |
0.55 |
|
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity |
0.55 |
|
Inhibition of the integrin alpha-V beta-3 reverts the paradoxical effect of levothyroxine replacement during bexarotene therapy in cutaneous T-cell lymphoma |
0.54 |
|
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) |
0.54 |
|
Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas |
0.53 |
|
Stochastic genome - nuclear lamina contacts are linked to histone H3K9 dimethylation (RNA-seq data) |
0.52 |
|
Stochastic genome - nuclear lamina contacts are linked to histone H3K9 dimethylation |
0.52 |
|
Long noncoding RNA signatures induced by TLR7 and type I IFN signaling in activated human plasmacytoid dendritic cells |
0.49 |
|
Profiles of ribosome-associated mRNAs regulated by expression of wild-type (WT) or R534H variant of DDX3 with or without Sodium Arsenite treatment |
0.45 |
|
Total RNA profiles associated with DDX3 wild-type (WT) or R534H variant expression with or without sodium arsenite treatment [RNA-seq] |
0.45 |
|
Dual inhibition of HDMX and HDM2 as a Therapeutic Strategy in Leukemia |
0.44 |
|
p53 activity results in DNA replication fork processivity |
0.44 |
|
Loss of 9p21 regulatory hub promotes kidney cancer progression by upregulating HOXB13 |
0.43 |
|
Differential mRNA expression upon 9p21 deletion in HEK TE single-cell derived clones |
0.43 |
|
RNA-seq of cancer cell lines treated with T-025 |
0.41 |
|
Transcriptional profiling of SF295 cells following MTF1 knockout by CRISPR/Cas9 |
0.4 |
|
Genome-wide modelling of transcription kinetics reveals patterns of RNA processing delays |
0.4 |
|
A Stable Transcription Factor Complex Nucleated by Dimeric AML1-ETO Controls Leukaemogenesis |
0.4 |
|
CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops |
0.39 |
|
Expression alterations induced by restoration of AXIN1 expression in SNU449 hepatocellular carcinoma cells |
0.38 |
|
Smoking Dysregulates the Human Airway Basal Cell Transcriptome at COPD-linked Risk Locus 19q13.2 |
0.35 |
|
Role of OSGIN1 in Mediating Smoking-induced Autophagy in the Human Airway Epithelium [RNA-Seq] |
0.35 |
|
Role of OSGIN1 in Mediating Smoking-induced Autophagy in the Human Airway Epithelium |
0.35 |
|
A novel transcriptional network for the Androgen Receptor in human epididymis epithelial cells [RNA-Seq] |
0.35 |
|
A novel transcriptional network for the Androgen Receptor in human epididymis epithelial cells |
0.35 |
|
RNA-sequencing of tamoxifen-resistant and -sensitive breast cancer cell lines. |
0.32 |
|
Uridylation-mediated RNA quality control pathway in mammalian cytoplasm [RNA-Seq] |
0.32 |
|
TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. |
0.32 |
|
Persistence of stem cell metabolism in cancers as a failure of differentiation |
0.31 |
|
Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs |
0.31 |
|
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [UNSWCD] |
0.29 |
|
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice |
0.28 |
|
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] |
0.28 |
|
RNA-seq of MDA-MB-231 cells with TET1 knockout |
0.28 |
|
Folate modulation induces chromosomal instability and higher proliferation of immortalized human keratinocytes |
0.26 |
|
Transcriptome analysis of V336Y mutant mitochondrial ribosomal protein in human HEK293 cell line |
0.26 |
|
Functional significance of the HIV-1 Tat signature amino acid residues |
0.25 |
|
Discovery of Drug Candidates that Inhibit and Eliminate Zika Virus Infection in Fetal and Adult Brain |
0.24 |
|
Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells |
0.24 |
|
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer |
0.23 |
|
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer [RNA-seq] |
0.23 |
|
Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity |
0.23 |
|
Stage-specific regulation of the WNT/β-catenin pathway enhances differentiation of hESCs into hepatocytes |
0.23 |
|
shRNA knockdown of YAP1 in HCC364 cells, various drug conditions |
0.22 |
|
The RNA-binding protein RBM47 suppresses metastatic breast cancer progression |
0.22 |
|
Cap-specific terminal N6-methylation of RNA by an RNA polymerase II-associated methyltransferase. |
0.22 |
|
A20 regulates canonical wnt-signaling through an interaction with RIPK4 |
0.21 |
|
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation |
0.21 |
|
Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 |
0.2 |
|
Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 [RNA-seq] |
0.2 |
|
Transcriptome-analysis of patient-derived normal and ulcerative colitis intestinal epithelial organoids |
0.19 |
|
Gene expression profile in FTSEC cells (FT190 and FT194 cell lines) transduced with shRNA to knockdown RNF20 or with control shRNA using RNA-seq. |
0.18 |
|
FTSEC cells (FT190 and FT194 cell lines) transduced with shRNA to knockdown RNF20 or with control shRNA |
0.18 |
|
eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants |
0.18 |
|
Host transcriptome analysis of Aspergillus fumigatus infection in Airway Epithelial Cells |
0.18 |
|
Defective transcription elongation in a subset of cancers confers immunotherapy resistance (human cell lines RNA-Seq) |
0.16 |
|
WNT signaling memory is required for ACTIVIN to function as a morphogen |
0.15 |
|
Genome wide characterization of a STAT1-independent antiviral and immunoregulatory transcriptional program induced by IFNβ and TNFα reveals non-canonical STAT2 and IRF9 pathways |
0.14 |
|
Hyperactive mTOR and MNK1 phosphorylation of eIF4E confer tamoxifen resistance and estrogen independence through selective mRNA translation reprogramming |
0.12 |
|
HIV Reprograms Human Airway Basal Stem/Progenitor Cells to Acquire a Tissue Destructive Phenotype |
0.11 |
|
Identification of a LIF-responsive replication-competent human β cell |
0.11 |
|
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome |
0.1 |
|
RNA-seq analysis in knockdown Jurkat samples for each factor of TAL1 complex |
0.09 |
|
Oncogenic roles of ARID5B in T-ALL |
0.09 |
|
Modulation of nonsense-mediated decay by rapamycin |
0.08 |
|
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle [RNA-seq] |
0.07 |
|
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle |
0.07 |
|
Human SETMAR is a DNA sequence-specific histone-methylase with a broad effect on the transcriptome |
0.07 |
|
RNA-Sequencing of HepG2 cells treated with TGFBeta |
0.05 |
|
Unbiased identification of trans regulators of ADAR and A-to-I RNA editing |
0.05 |
|
Identification of trans regulators of ADAR and A-to-I RNA editing using RNA-seq |
0.05 |
|
Influenza Vaccination Primes Human Myeloid Cell Cytokine Secretion and Natural Killer Cell Function |
0.04 |
|
CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia |
0.04 |
|
The Small Molecule ISRIB Reverses the Effects of eIF2α Phosphorylation on Translation and Stress Granule Assembly |
0.04 |
|
mRNA sequencing of clinical-grade neural stem cells derived from human ES cells |
0.04 |
|
Zika virus infection reprograms global transcription of host cells to allow sustained infection |
0.03 |
|
A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module |
0.03 |
|
Targets of ROR2 overexpression in MCF-7 cells revealed a differentially regulated module of non-canonical WNT signaling pathway |
0.02 |
|
Transcriptional profiling of growing and senescent WT and IL-1R-depleted IMR90 cells |
0.02 |
|
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling |
0.01 |
|
Genome-wide search for differentially expressed RNAs responsible for the effects induced by Ebola virus replication and transcription |
0.0 |