Gene Query: JPH4

Dataset Description Geneva Score
High-depth RNA sequencing of isogenic wild-type, PIK3CA-WT/H1047R and PIK3CA-H1047R/H1047R human iPSCs 56.37
Single Cell Analysis Reveals Unexpected Transcriptional Heterogeneity of Neural Progenitors in the Developing Human Cortex 42.79
Dissecting the dynamics of signaling events in the BMP,WNT and NODAL cascade during self-organized fate patterning in human gastruloids 38.85
RNA-Seq to assess the transcriptional effects of G quadruplex stabilization by the G4 ligand PhenDC3 in HT-1080 cells 36.37
Self-organized amniogenesis by human pluripotent stem cells in a biomimetic implantation-like niche 33.3
Bach1 Regulates the Self-renewal and Mesendodermal Differentiation of Human Embryonic Stem Cells 30.1
Induction of human SST and PV neurons by expressing a single transcription factor LHX6 27.12
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_human] 25.92
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data 23.67
circRNA-sequencing 22.9
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq] 22.04
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability 22.04
mRNA sequencing of the global effect of SOX2 on gene expression in hESC and hESC derived NPCs. 21.99
Next-generation sequencing of human dermal fibroblasts transdifferentiated towards the otic lineage 20.82
Targeted reactivation of FMR1 transcription in FXS embryonic stem cells 20.75
Next Generation RNA Sequencing Analysis of AMPK Wild Type, AMPKα-KO and AMPKα1-2A U2OS cell Transcriptomes 20.25
RNA-seq analysis of RALD iPSCs after in vitro differentiation 19.53
Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma 19.46
Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors 19.4
A myogenic double reporter human pluripotent stem cell line allows prospective isolation of skeletal muscle progenitors 19.37
DIGIT regulates endoderm differentiation of human embryonic stem cells 19.32
Transcriptome profiling of H1-iCas9 cells grown on laminin and on MEFs 19.04
FUS mutant human motoneurons transcriptome analysis reveals altered pathways and impairment of microRNA function 18.72
RNA sequencing of BT142 and TS603 cell lines 18.39
Metabolic Reprogramming Associated with Aggressiveness Occurs in the G-CIMP-High Molecular Subtypes of IDH1mut Lower Grade Gliomas 18.39
Next Generation Sequencing Facilitates Quantitative Analysis of Human Pluripotent Stem Cell-Derived Endocardial-like And Primary Cardiac Endothelial Cell Transcriptomes 17.67
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 17.55
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma 17.18
Differentiation enhances Zika virus infection in neuronal brain cells 16.99
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery 16.99
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery (RNA-seq data set) 16.99
The effect of insulin on mRNA transcription of human pluripotent stem cells 16.32
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells 15.82
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells [RNA-seq] 15.82
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of H1 and H1 after SNAI1 deletion at Day2 after human early hematopoietic differentiation . 15.48
Chemical Modulation of Glycolysis Regulates the KEAP1-NRF2 Pathway Through a Metabolite-Induced Posttranslational Modification 15.37
RNA-seq analysis to identify the genes regulated by p53-SET interplay 14.42
RNA sequencing analysis of human embryonic stem cells and axial progenitors 14.21
The Glioma-Infiltrating T Cell Receptor Repertoire 14.18
Parkinson’s Disease Genetic Risk in a Midbrain Neuronal Cell Line 14.14
Epigenomic landscape during organ formation in human early embryos 13.74
Examining serotonergic neuron differentiation from human iPSCs 13.56
Mastermind-like 3 controls proliferation and differentiation in neuroblastoma (RNA-seq) 13.43
Mastermind-like 3 controls proliferation and differentiation in neuroblastoma 13.43
RNA-seq of UGP2 mutant human embryonic stem cells and in vitro differentiated neural stem cells 13.2
POLR3G Dependent PolyA+ and smallRNA Transcriptomes in Human Pluripotent Stem Cells 12.92
Human embryonic stem cells in E8 and AKIT culture medium 12.91
Growth factor-free, chemically-defined culture system for expansion and derivation of human pluripotent stem cells 12.91
NGS based identification of GD2-positive tumor-specific phenotype for cancer diagnostics and therapy 12.85
The lipodystrophic hotspot lamin A p.R482W mutation deregulates the mesodermal inducer T/Brachyury and early vascular differentiation gene networks 12.76
Transcriptional Targeting Of Oncogene Addiction In Medullary Thyroid Cancer [RNA-Seq] 12.69
Transcriptional Targeting Of Oncogene Addiction In Medullary Thyroid Cancer 12.69
RNA sequencing for PDX1, NGN3 and MAFA transduced iPSCs cell 12.65
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes 12.4
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes [RNA-Seq] 12.4
Repurposing of promoters and enhancers during mammalian evolution 12.23
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [longRNA] 12.03
Comparing gene expression in iPSC derived RPE from control and AMD donors 11.98
Statins modulate endothelial transcriptional profile by inhibiting EZH2 11.94
hTERT promotes cell adhesion and migration independent of telomerase activity 11.88
Targeted differentiation of regional ventral neuroprogenitors and related neuronal subtypes from human pluripotent stem cells 11.77
CHCHD2 gene KO effect in iPSC drived motor neurons 11.6
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas 11.4
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq] 11.4
Capturing the biology of mild versus severe disease in a pluripotent stem cell-based model of Familial Dysautonomia 11.19
Rescue of Fragile X syndrome neurons by DNA methylation editing of the FMR1 gene [RNA-seq] 11.13
Rescue of Fragile X syndrome by DNA methylation editing of the FMR1 11.13
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 10.77
An integrative analysis of non-coding regulatory DNA variations associated with autism 10.75
The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq2] 10.57
LMO1 Synergizes with MYCN to Promotes Neuroblastoma Initiation and Metastasis 10.34
A Brain Penetrant Mutant IDH1 Inhibitor Provides In Vivo Survival Benefit 10.3
PT2385 HIF2A inhibitor treatment of patient derived orthotopic xenograft neuroblastoma cells in the presence or absence of hypoxia 9.96
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury 9.92
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury [human iPS] 9.92
a-synuclein accumulation in an iPSC derived model of early onset sporadic Parkinson’s Disease reveals novel drug targets 9.88
RNA-Seq analysis of neurons derived from induced pluripotent stem cells reprogrammed from dental pulp 9.81
Differentially expressed (DE) genes analysis in synovial fluid mesenchymal stem cells (SF-MSCs), SF-MSC derived iPSCs and iPSC derived MSCs (iPSC-MSCs) 9.57
LncPRESS1 is a p53-regulated lncRNA that safeguards pluripotency by disrupting SIRT6 mediated de-acetylation of histone H3K56 9.28
RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation [RNA-Seq] 9.19
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells 9.14
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells (RNA-Seq) 9.14
A role for ZNF598 in post-transcriptional gene regulation 9.1
Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells 8.85
RNA sequencing for human induced pluripotent stem cell cardiomyocyte differentiation 8.82
Restoration of Progranulin Expression Rescues Cortical Neuron Generation in Induced Pluripotent Stem Cell Model of Frontotemporal Dementia 8.67
Heterozygous and homozygous knock-in of PIK3CA-H1047R into human iPSCs 8.64
High-efficiency RNA-based reprogramming of human primary fibroblasts 8.62
Dynamics of the human and viral m6A RNA methylomes during HIV-1 infection of T cells 8.42
RNA-Seq of LRRK2 G2019S Parkinson’s iPSC-derived astrocytes 8.41
Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations [RNA-seq] 8.39
Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations 8.39
The effect of engineered del(7q) on induced pluripotent stem cells (iPSCs) derived from patients with Shwachman Diamond Syndrome (SDS). 8.36
Role of miR-146a in neural stem cell differentiation and neural lineage determination: relevance for neurodevelopmental disorders 8.17
RNA-Seq characterization of human H1-derived NPC differentiation timecourse 8.07
Transcriptome analysis of genetically matched human induced pluripotent stem cells disomic or trisomic for chromosome 21 8.0
RNA-seq of naive and primed ES cells (NHSM) 7.67
Targeting EZH2 in MYCN-amplified Neuroblastoma 7.53
Targeting EZH2 in MYCN-amplified Neuroblastoma [RNA-seq] 7.53
Impact of flanking chromosomal sequences on localization and silencing by the ncRNA XIST 7.53
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons 7.46
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons [RNA-Seq] 7.46
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator 7.45
ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator [RNA-seq] 7.45
Hyper-excitability of Neurons generated from Patients with Bipolar Disorder 7.27
Generation of Brain Region-specific Organoids using a Miniaturized Spinning Bioreactor and Modelling ZIKV Exposure 7.23
In vivo generation of post-infarct human cardiac muscle by laminin-promoted cardiovascular progenitors [LN-521 or LN-521+LN-221] 7.08
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies 6.82
Gata6 potently initiates reprogramming of pluripotent and differentiated cells to extraembryonic endoderm stem cells [ChIP-Seq & RNA-Seq] 6.78
Gata6 potently initiates reprogramming of pluripotent and differentiated cells to extraembryonic endoderm stem cells 6.78
Quantitative comparison between cellular mRNAs and exosomal mRNAs in human iPSC-derived motor neurons 6.78
CHCHD10 gene KO effect in iPSC drived motor neurons 6.75
Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain 6.74
Next Generation Sequencing Facilitates Comparisons of Control and Schizophrenia-Patient derived hiPSC-derived neurons 6.48
Brain organoids reproducibly generate the cellular diversity of the human cerebral cortex 6.31
Expression profiling of lncRNAs, miRNAs and mRNAs and their differential expression in leiomyoma using next generation RNA sequencing 6.23
RNA-Seq Analysis in hES/ iPS cell-derived neuronal samples 6.18
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells [Endoderm RNA-seq and ChIP-seq data sets] 6.12
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells 6.12
Comprehensive molecular phenotypic effects of the large deletion on chromosome 22q11.2 6.1
Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma using high throughput RNA sequencing 6.06
Reprogramming by de-bookmarking somatic transcriptional program via targeting the BET bromodomains 5.98
Paired Related Homeobox Protein 1 Regulates Quiescence in Human Oligodendrocyte Progenitors 5.87
Analysis of MGE Transcriptomes with or without Ctnnb1 knockout in human through RNA Sequencing 5.61
Characterization and therapeautic application of mesenchymal stem cells with neuromesodermal origin from human pluripotent stem cells 5.6
Transcriptome variation among human embryonic stem cell lines impacts on their differentiation 5.49
SMN deficiency in spinal muscular atrophy causes widespread intron retention and DNA damage 5.31
SAM68 is required for regulation of Pumilio by the NORAD long noncoding RNA 5.28
FOXP2's impact on the primate transcriptome 5.16
Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals 5.05
Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 5.01
Functional Haploid Human Oocytes Generated from Polar Body Genomes (RNA-Seq) 4.97
Functional Haploid Human Oocytes Generated from Polar Body Genomes 4.97
SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons 4.96
Analysis of the Clustered Protocadherin (cPcdh) Locus in Human Pluripotent Stem and Derived Cells [RNA-seq II our of II] 4.95
Total RNA sequencing of prospective axial stem cell cultures derived from human pluripotant stem cells 4.93
Heterozygous mutations in SMARCA2 lead to impaired neurogenesis due to global retargeting of SMARCA4 4.73
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (ALK) 4.71
Nonpregnant and term pregnant human myometrial tissues 4.7
Transcriptomic profiles of nonpregnant and term pregnant human myometrial tissues 4.7
CUREfast: Accelerating research with families 4.69
Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4 4.64
Comparative Transcriptome analysis of hESCs- and iPSCs-derived lentoid body 4.63
Disruption of GRIN2B impairs differentiation in human neurons 4.63
Transcriptomic analysis to underly the heterogeneity between 4 cellular models derived from patients diagnosed with pediatric high-grade gliomas under controlled atmosphere (modulation of oxygen level). 4.61
Human Sandhoff Disease Cerebral Organoids Exhibit Enlarged Size, Increased Cellular Proliferation, and Impaired Differentiation 4.56
Major hnRNP proteins act as general TDP-43 functional modifiers both in Drosophila and human neuronal cells. 4.52
Role of FGFR1 in neuronal devlopment 4.52
Next Generation Sequencing Facilitates Quantitative Analysis of mesoderm posterior bHLH transcription factor 1(MESP1)+ and MESP1- cells' Transcriptomes 4.51
RNA-seq of SOX5 overexpressing primary human neuronal progenitors 4.5
The SS18-SSX fusion oncoprotein hijacks BAF complex targeting and function to drive synovial sarcoma [RNA-Seq Tumor] 4.47
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain 4.43
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain [RNA-Seq] 4.43
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [d7+d14] 4.39
RNA profiling Analysis of the Serum Exosomes Derived from Active and Latent M.tuberculosis infectious Patients 4.36
CRISPR/Cas9 Screens Reveal Epstein-Barr virus Synthetic Lethal Targets 4.34
Safeguarding nucleolar homeostasis by CBX4 alleviates senescence and osteoarthritis 4.21
SOX17 Is a Critical Specifier of Human Primordial Germ Cell Fate 4.15
Generating Patterned Kidney Organoids for Studying Development and Diseases 4.14
Epigenetic siRNA and chemical screens identify SETD8 inhibition as a new therapeutic strategy of p53 reactivation in high-risk Neuroblastoma. 4.14
Human optic chiasm from healthy controls and multiple sclerosis patients 4.06
Multiple sclerosis and EAE 4.06
nELAVL HITS-CLIP in Alzheimer's Disease patients 4.03
EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells (RNA-Seq) 3.82
EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells 3.82
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors 3.78
The histone H3.3K27M mutation in pediatric glioma reprograms H3K27 methylation and gene expression 3.78
PolyA-sequencing in Kelly and Kelly E9R neuroblastoma cells treated with THZ531 or DMSO 3.77
RNA expression analysis of neuroblastoma cell lines treated with epigenetic drugs 3.74
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells 3.72
The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq] 3.7
Serotonin-induced hyperactivity in SSRI-resistant major depressive disorder patient-derived neurons 3.67
Comparative whole-transcriptomic analysis between normal and AKAP-Lbc-depleted human embryonic stem cells 3.65
Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes 3.65
PRC2 specifies ectoderm lineages and maintains pluripotency in primed but not naïve ESCs 3.62
iPSC derived motor neuron cultures from C9ORF72 carriers 3.59
Transcriptional alteration after ionizing radiation exposure in human fibroblasts, iPSCs and NPCs 3.55
Polycomb complexes associate with enhancers to promote oncogenic transcriptional programs in cancer 3.54
Single amino acid change underlies distinct roles of H2A.Z subtypes in human syndrome 3.53
SOX21 ensures rostral forebrain identity by suppression of WNT8B during neural regionalization of human embryonic stem cells 3.48
Dissecting neural differentiation regulatory networks through epigenetic footprinting 3.42
Transcriptional dependencies in diffuse intrinsic pontine glioma 3.38
Modeling human brain evolution using induced pluripotent stem cells: comparative analysis of neuronal development in humans and chimpanzees 3.36
Nuclear Actin Regulates Inducible Transcription by Enhancing RNA Polymerase II Clustering 3.31
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of human mesenchymal stem cells differentiation from human embryonic stem cells and adult bone marrow mesenchymal stem cells 3.25
Next Generation Sequencing Facilitates Comparisons of Control and Schizophrenia-Patient derived hiPSC-derived NPCs 3.24
A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [SHSY5Y cells] 3.22
Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics 3.21
Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics (RNA-Seq) 3.21
Genome wide characterization of a STAT1-independent antiviral and immunoregulatory transcriptional program induced by IFNβ and TNFα reveals non-canonical STAT2 and IRF9 pathways 3.21
Mutations in EBF3 disturb transcriptional profiles and cause intellectual disability, ataxia and facial dysmorphism 3.21
Human germ cell formation in xenotransplants of induced pluripotent stem cells carrying X chromosome aneuploidies 3.2
FGF2 regulation of gene expression in stable inducible Neurons 3.2
Transcriptomic and Epigenomic analysis of Huntington's disease and control patient iPSC-derived neural cells 3.18
mRNAseq of Huntington's disease and control patient iPSC-derived neural cells 3.18
RNA-seq of hiPSCs-derived NPCs from 3 pairs of dizygotic discordant twins for Congenital Zika syndrome 3.15
Transcriptome analysis of human embryonic stem cells (hESCs) and human fibroblasts upon rapamycin 3.15
The SS18-SSX oncoprotein hijacks KDM2B-PRC1.1 to drive synovial sarcoma 3.13
The SS18-SSX oncoprotein hijacks KDM2B-PRC1.1 to drive synovial sarcoma [RNA-seq] 3.13
Recapitulation of Human Neural Microenvironment Signatures in iPSC-Derived NPC 3D Differentiation 3.1
iPSC-Derived Cholangiocytes 3.03
Induced pluripotent stem cell modeling of bone marrow failure and MDS identifies therapeutic targets 2.99
A peninsular structure coordinates asynchronous differentiation with morphogenesis to generate pancreatic islets [bulk vs buds] 2.98
Temporal activation of NR5A2 and RARγ induce functional human naïve pluripotent state via modulating TGFβ pathway 2.97
The acetyllysine reader BRD3R promotes human nuclear reprogramming and regulates mitosis 2.96
Networks of cultured iPSC-derived neurons reveal the human synaptic activity-regulated adaptive gene program 2.96
Epigenetic mechanisms underlie the crosstalk between growth factors and a steroid hormone [HCT RNA-Seq] 2.96
R430: A potent inbibitor of DNA and RNA viruses 2.95
Single-cell RNA-Seq Investigation of Foveal and Peripheral Expression in the Human Retina 2.9
Differentially expressed vascular development genes for iPSC-ECs from CDI 2.88
Coordination of neuron production in mouse and human cerebral cortex by the homolog of Drosophila Mastermind protein 2.88
Real-time observation of light-controlled transcription in living cells 2.83
Culture-induced recurrent epigenetic aberrations in human pluripotent stem cells 2.81
Culture-induced recurrent epigenetic aberrations in human pluripotent stem cells [RNA-seq] 2.81
RNA-seq of naive and primed ES cells 2.78
Studying the selectivity of a small molecule Synucleozid on transcriptome 2.78
Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing 2.73
Increased Neanderthal ancestry in genomic regions associated with lipid catabolism in contemporary Europeans 2.73
‘Naïve’ ESRRB+ iPSCs with the capacity for rapid neural differentiation 2.72
Functional astrocytes differentiated from hiPSCs 2.72
Deep sequencing of transcript levels in pluripotent stem cells and their differentiated derivatives in all three germ layers 2.71
RNA-Seq Analysis in purified iPS cell-derived neuronal samples 2.71
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 2.63
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 2.63
ZNF804A transcriptome networks in differentiating human neurons derived from induced pluripotent stem cells 2.62
RNA-seq data for non-targeting siRNA and CDK11 siRNA transfection in SHhES8 cells 2.62
Human pluripotent stem cell-derived brain tumor model uncovered embryonic stem cell signature as a key driver in atypical teratoid/rhabdoid tumor (RNA-Seq) 2.57
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) 2.54
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq] 2.54
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons 2.54
Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors 2.52
Robust generation of honemogeneous midbrain organoids with in vivo–like cellular composition facilitates neurotoxin-based Parkinson’s disease modeling 2.5
Derivation of kidney organoids from human pluripotent stem cells [RNA-Seq: Data Set 2] 2.47
RNA-seq in endometrial stromal tumors 2.47
RNA-Seq of the corpus callosum from 12 individuals 2.46
Genomic basis for clinical response to histone deacetylase inhibition in advanced urothelial carcinoma 2.44
Human iPSC-based Modeling of Late-Onset Disease using Progerin-induced Aging 2.43
Maturing an Enteric Nervous System in Human Intestinal Organoid-derived Tissue-Engineered Small Intestine 2.43
Transcriptomes of iPSC-derived and post-mortum Hypothalamus Neurons from obese and control donors 2.39
Time series total RNA sequencing of a differentiation of human embryonic stem cells towards trophoblast lineage 2.38
Primary Human B-cell Temporal Response to CD40L Stimulation 2.37
Universal alternative splicing of noncoding exons 2.34
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion 2.33
Inhibition of SF3B1 by molecules targeting the spliceosome in Rh18 cells 2.33
Characterization of EZH2-deficient human embryonic stem cells [ChIP-seq and bulk RNA-seq] 2.32
Alteration of the microRNA network during the progression of Alzheimer’s disease 2.3
Hyper-activation of HUSH complex function by Charcot-Marie-Tooth disease mutation in MORC2 2.28
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 2.28
Transcriptome of iPSC-derived Neural Cells with Heterozygous Knockout in CHD8 2.27
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq Human] 2.25
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 2.24
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration [RNA-seq2] 2.21
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [ZNF787] 2.21
Epigenomic conservation of transposable element silencing [RNA-seq] 2.2
Epigenomic conservation of transposable element silencing 2.2
Next Generation Sequencing of human SMA and healthy control Motor Neurons 2.17
Differential gene expression tools exhibit substandard performance for long non-coding RNA-sequencing data 2.17
In vitro modeling of human germ cell development using pluripotent stem cells 2.17
AMPK signaling for naïve pluripotency [Hs] 2.16
AMPK signaling for naïve pluripotency 2.16
C9/ALS Human Embryonic Stem Cells and C9/ALS Induced Pluripotent Stem Cells 2.15
Differetially expressed genes after hTR overexpression in U2OS cells 2.1
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 2.08
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of H1, H1 derived APLNR+ cells, CD31+CD34+ cells and CD43+ cells during human early hematopoietic differentiation 2.07
Generating Patterned Kidney Organoids for Studying Development and Diseases [bulk RNA-Seq] 2.06
FUS KO mRNA sequencing and anti-FUS RNA immunoprecipitation sequencing 2.06
Hematopoietic Stem and Progenitor Cells from Human Pluripotent Stem Cells via Transcription Factor Conversion of Hemogenic Endothelium 2.05
Ro60-knockout cells 2.04
Human SETMAR is a DNA sequence-specific histone-methylase with a broad effect on the transcriptome 2.03
Zika virus directly infects human peripheral neurons and induces cell death 2.01
Identification of transcripts altered upon LIN-41 knockdown in human embryonic stem cells 1.98
Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs 1.95
C9orf72 Intermediate Repeats are Associated with Corticobasal Degeneration, Increased C9orf72 Expression and Disruption of Autophagy 1.95
Alternative classification of glioblastoma based on BUB1B-inhibition sensitivity 1.94
Next Generation Sequencing Facilitates Quantitative Analysis of transcriptomes of human cord blood CD34+ cells treated with HDAC5 inhibitor 1.92
Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency 1.88
Integrated Multi-omic Analysis of Esthesioneuroblastomas Identifies Two Subgroups Linked to Cell Ontogeny 1.82
Directed differentiation of human embryonic stem cells to corneal endothelial cell-like cells: A transcriptomic analysis 1.82
Expression profiles of the four human major ectodermal lineages 1.82
The control of rRNA synthesis during the directed differentiation of human embryonic stem cells precedes heterochromatin formation. 1.76
Regionally specified human pluripotent stem cell-derived astrocytes 1.76
Transcriptome analysis of human embryonic stem cells (hESCs) upon siRNA-mediated knockdown of hESC-essential genes 1.75
Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis 1.74
Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis [RNA-Seq] 1.74
Gene expression profiling via RNA sequencing of patient brain tumors cultured in 3D bioengineered cultures 1.74
ERBB3 and NGFR mark distinct skeletal muscle progenitor cells in human development enabling enrichment and maturation of hPSC muscle 1.73
Reversible LSD1 Inhibition with HCI-2509 induces the p53 gene expression signature in high-risk neuroblastoma cells 1.72
Effect of the knockdown of MLL1 and MLL2 on pediatric high grade glioma 1.71
Epigenetic Therapy Increases Therapeutic Efficacy in Myeloproliferative Neoplasms Through Inhibition of Aberrant Inflammatory Signaling 1.7
Characterization and transplantation of enteric neural crest cells from human induced pluripotent stem cells 1.7
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development 1.66
Enhancing human kidney organoid differentiation from pluripotent stem cells with high-throughput automation 1.64
Self-organization of polarized cerebellar plate neuroepithelium in three-dimensional culture of human pluripotent stem cells 1.64
Progressive motor neuron pathology and the role of astrocytes in a human stem cell model of VCP-related ALS 1.64
Controlling for gene expression changes in transcription factor protein networks. 1.62
Transcriptome analysis of SH-SY5Y cells after knockdown of circSLC45A4 1.62
Analysis of chromosomal aberrations and recombination by allelic bias in RNA-Seq 1.61
RNA-seq analysis of control and Myc-induced U2OS cells 1.61
H9-hESC derived human neural stem cells with combinations of mutant IDH1-R132H overexpression, P53 shRNA knockdown and/or ATRX shRNA knockdown 1.59
RNA-seq of H9-hESC derived human neural stem cells with combinations of mutant IDH1-R132H overexpression, P53 shRNA knockdown and/or ATRX shRNA knockdown 1.59
Transcriptome analysis revealed impaired cAMP responsiveness in PHF21A-deficient human cells 1.53
Genome-wide maps of chromatin state and Gene Expression Profiling in HCT116 cells 1.52
Gene Expression Profiling of WT and KDM3A Knocked out Cell 1.52
Single-Cell RNA Sequencing Reveals Metallothionein Heterogeneity during hESC Differentiation to Definitive Endoderm [RNA-Seq] 1.51
Transcript abundance in A-T-derived iPSC: Comparing isogenic cells to unrelated individual 1.51
Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance [RNA-seq] 1.5
Transcriptomic analysis of human neural progenitor cells differentiation into astrocytes 1.49
Pseudouridylation of tRNA-derived fragments steers translation control in stem cells [Polysome-Seq] 1.47
Gene expressions of H9s in different culture systems 1.47
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells 1.45
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq] 1.45
SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression 1.45
Modeling Trilateral Retinoblastoma using Human Embryonic Stem Cells 1.44
RNA Missplicing in Fuchs Endothelial Corneal Dystrophy 1.43
Antiviral innate immunity of hepatitis C virus-infected stem cell-derived hepatocytes 1.42
MYT1 attenuates neuroblastoma cell differentiation by inhibiting retinoic acid signaling pathway 1.4
Downregulation of DDX5/DDX17 and REST 1.4
Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence 1.4
Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence [RNA-seq] 1.4
Postnatal lipids drive hepatocyte maturation 1.37
RNA-Seq comparative analysis of human neuroblastoma cells before and after their confrontation to the embryonic microenvironment 1.37
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 1.37
Transposon-based construction of strand-specific RNA-seq libraries 1.36
Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells 1.36
Next-generation sequencing of control and schizophrenia hiPSC derived NPC 1.34
Genome-wide transcriptome profiles in Control and Schizophrenia hiPSC-dervied NPC [RNA-seq] 1.34
Next Generation Sequencing Compares Effects of microRNA-9 perturbation in control and SZ hiPSC NPCs 1.33
Transcriptomic profiling of human CD34+ derived mast cells [RNA-Seq] 1.33
Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases 1.33
Global transcriptional analysis of human extended pluripotent stem cells, human primed pluripotent stem cells, mouse extended pluripotent stem cells, and mouse embryonic stem cells by RNA-seq 1.32
Global transcriptional analysis and genome-wide analysis of chromatin state in extended pluripotent stem cells, primed pluripotent stem cells, and naïve pluripotent stem cells 1.32
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies [RNA-seq data set 2] 1.32
Transcriptomic profile of human embryonic renal corpuscles 1.32
EGFR Mutation Promotes Glioblastoma Through Epigenome and Transcription Factor Network Remodeling 1.28
The ALK downregulated target gene HBP1 and repressor of MYCN activity as synergistic target for combined PI3K/HDAC inhibition [RNA-Seq] 1.28
The ALK downregulated target gene HBP1 and repressor of MYCN activity as synergistic target for combined PI3K/HDAC inhibition 1.28
O-glcnAc reprograms cellular energetics 1.28
Transcriptomic analysis of human iPS cells derived from fragile X syndrome patients during neural differentiation 1.27
Re-programing chromatin with a bifunctional LSD1/HDAC inhibitor induces therapeutic differentiation in DIPG [RNA-seq] 1.27
Re-programing chromatin with a bifunctional LSD1/HDAC inhibitor induces therapeutic differentiation in DIPG 1.27
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] 1.27
RNA-seq in neurons derived from iPSCs in controls and patients with schizophrenia and 22q11 del 1.26
Transcriptome analyses of iPSC-derived neural stem/progenitor cells and cerebral organoids from monozygotic twins discordant for schizoaffective bipolar disorder 1.25
MEIS1 regulates hematopoiesis in hPSCs 1.24
m6A level and isoform characterization sequencing (m6A-LAIC-seq) reveal the census and complexity of the m6A epitranscriptome 1.23
mRNA-Seq profiling SIX2+ and Foxd1+ cells in mouse embryonic and SIX2+ and SIX2-/MEIS1+ cells human fetal kidney 1.2
Studying iPSCs from a hibernating mammal reveals molecular mechanisms of cold resistance in neural tissues 1.18
RNA-sequencing of Wnt-dependent and Wnt-independent of Glioblastoma stem cell cultures 1.17
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation 1.16
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation (RNA-Seq) 1.16
ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2 1.15
ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2 [RNA-Seq] 1.15
Patient iPSC-Derived Neurons for Disease Modeling of Frontotemporal Dementia with Mutation in CHMP2B 1.15
REPROGRAMMING IDENTIFIES FUNCTIONALLY DISTINCT STAGES OF CLONAL EVOLUTION IN MYELODYSPLASTIC SYNDROMES 1.14
RNA-Seq of human induced pluripotent stem cell-derived cardiomyocytes from a cardiomyopathy patient and familial control 1.14
A Werner syndrome stem cell model unveils heterochromatin alterations as a driver of human aging 1.11
Activity-dependent transcriptional changes in human neurons 1.09
Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function 1.08
Effects of Spaceflight on Human Induced Pluripotent Stem Cell-Derived Cardiomyocyte Structure and Function 1.08
Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-dependent neurodegeneration 1.07
Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow 1.07
Isolation of highly enriched cardiac mesoderm from differentiating human embryonic stem cells 1.07
CD13 and ROR2 permit isolation of highly enriched cardiac mesoderm from differentiating human embryonic stem cells 1.07
Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia [shRNA] 1.07
ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing (RNA-seq) 1.06
ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing 1.06
LINE-2 transposable elements are a source of functional human microRNAs and target sites 1.05
UBE3A-mediated regulation of imprinted genes and epigenome-wide marks in human neurons 1.02
Folliculin regulates mTORC1/2 and WNT pathways in early human pluripotency 1.01
Primate-specific gene TMEM14B promotes cortical expansion and folding 1.01
WNT signaling memory is required for ACTIVIN to function as a morphogen 1.01
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation 1.01
Enhancer divergence and cis-regulatory evolution in the human and chimpanzee neural crest 0.99
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human] 0.99
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug 0.99
Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [Primary RNA-Seq] 0.99
The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders 0.98
The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders [lnc-Nr2f1 overexpression] 0.98
Network-based, cross-cohort discovery of transcriptional mechanisms presiding over maintenance of high-risk neuroblastoma subtype state 0.96
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites 0.95
RNA-seq analysis of the human fetal kidney. 0.94
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq) 0.94
Detailed genomic and molecular characterization of Indian induced pluripotent stem cell lines 0.94
EZH2 and BCL6 cooperate to assemble CBX8-BCOR Polycomb complex to repress bivalent promoters, mediate germinal center formation and promote lymphomagenesis [RNA-seq] 0.93
EZH2 and BCL6 cooperate to assemble CBX8-BCOR Polycomb complex to repress bivalent promoters, mediate germinal center formation and promote lymphomagenesis 0.93
Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma 0.92
Therapeutic targeting of GCB- and ABC-DLBCLs by rationally designed BCL6 inhibitors 0.91
Verification and rectification of cell type-specific splicing of a Seckel syndrome-associated ATR mutation using iPS cell model 0.91
Systematic analysis of gene expression profiles controlled by hnRNP Q and hnRNP R, two closely related human heterogeneous nuclear ribonucleoproteins. 0.91
Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells 0.9
Subtle asymmetry of gene expression in embryonic and foetal human brains 0.9
Circular RNAs are super abundant in cervical tumor and plasma detected by high throughput microarray [RNA-Seq] 0.9
Circular RNAs are super abundant in cervical tumor and plasma detected by high throughput microarray 0.9
Gene Expression Profiling of Cutaneous CD30+ Lymphoproliferative Disorders by RNA-seq 0.88
RNA-seq analysis of hPSC-derived brain pericyte-like cells, hPSC-derived neural crest stem cells, and primary human brain pericytes 0.87
Cis-Regulatory Circuits Regulating NEK6 Kinase Overexpression in Transformed B Cells Are Super-Enhancer-Independent 0.87
Cis-Regulatory Circuits Regulating NEK6 Kinase Overexpression in Transformed B Cells Are Super-Enhancer-Independent (RNA-seq) 0.87
The age and genomic integrity of neurons after cortical stroke in humans 0.86
Comparative analysis of WT and ZEB1 KO cells in different stages during differentiation 0.86
MHC Transcriptomic landscape at haplotype-specific resolution 0.84
Nucleoporin-mediated regulation of cell identity genes 0.83
Microenvironmental-derived Regulation of HIF-Signaling Drives Transcriptional Heterogeneity in Glioblastoma Multiforme 0.83
Transcriptional regulation in pluripotent stem cells by Methyl CpG binding protein 2 (MeCP2) 0.82
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 0.81
The cohesin complex prevents Myc-induced replication stress 0.8
Regulation of DNA methylation landscape in human somatic cell reprogramming by miR-29 family (RNA-seq) 0.79
Regulation of DNA methylation landscape in human somatic cell reprogramming by miR-29 family 0.79
Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq 0.79
The expression of genes encoding palmitoylated proteins in axonal and synaptic compartments is affected in CLN1/PPT1 transfected neuronal cells 0.78
Transcriptomic profiling of human peripheral blood-derived mast cells 0.77
Genome-wide analyses of chromatin state in human mast cells reveal molecular drivers and mediators of allergic and inflammatory diseases 0.77
Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 0.77
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 0.76
RNA sequencing of prostate cancers reveal insights on the prognostic significance of visibility on multi-parametric MRI 0.75
RNA-seq of exosomes identifies lncRNA profiles that distinguish early-stage esophageal squamous cell carcinoma (ESCC) from non-malignant esophagitis 0.74
Transcriptomic Dynamics during Differentiation Process of Human Pluripotent Cells into Hepatocyte-like Cells 0.74
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 0.71
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing (Total RNA sequencing) 0.7
Identification of expressed and conserved human non-coding RNAs 0.7
RNA-seq analysis of gene expression patterns during hESC neural differentiation 0.69
hESC neural differentiation 0.69
RNA-seq data of small cell carcinoma of the bladder (SCCB) /urothelial carcinoma (Non-SCCB) clinical samples, and bladder-PARCB cell lines 0.68
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling 0.68
yylncT acts as a gatekeeper of the mesodermal transcriptional program by local modulation of DNMT3B [human_2] 0.67
RNA sequencing of prostate cancer and normal tissue from African Americans and European Americans 0.67
Macrophage Ad5f35 M2 Challenge 0.67
Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [RNA-Seq] 0.66
CDK12 mediated transcriptional regulation in U2OS cells 0.65
SOX10 Single Transcription Factor Based Fast and Efficient Generation of Oligodendrocytes from Human Pluripotent Stem Cells 0.65
PANCR, the PITX2 adjacent noncoding RNA, is specifically expressed in human left atria and regulates PITX2c expression 0.64
ALS implicated protein TDP-43 sustains levels of STMN2 a mediator of motor neuron growth and repair 0.61
Cell Type-Specific Chromatin Signatures Underline Regulatory DNA Elements in Human Induced Pluripotent Stem Cells and Somatic Cells 0.6
Epigenome regulation during epidermal lineage commitment [ATAC-seq, RNA-seq] 0.58
Efficient derivation of microglia-like cells from human pluripotent stem cells 0.58
RNA helicase A is necessary for KIF1Bβ tumor suppression in neuroblastoma 0.57
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation 0.55
Transcriptomic analysis of iPSC and ESC challenged with atmospheric or physiological oxygen 0.53
ELAVL2-regulated transcriptional networks in human neurons link atlernative splicing, autism and human neocortical evolution 0.48
Coding mutations and loss-of-imprinting in human pluripotent cells derived by nuclear transfer and defined factors [RNA-Seq] 0.48
Coding mutations and loss-of-imprinting in human pluripotent cells derived by nuclear transfer and defined factors 0.48
Study functions of ADAR proteins using next generation sequencing of genome and transcriptome 0.48
Entrectinib Resistance in a Neuroblastoma Xenograft Model 0.48
The global transcriptome analysis in the time course of hESC-derived cardiac differentiation 0.48
Inhibition of H3K4 demethylation induces autophagy in cancer cell lines 0.47
hNSCs siRNA NOVA2 0.47
Analysis of regulatory element evolution between human and mouse reveals a lack of cis-trans compensation 0.46
Pharmacological Induction of a Progenitor State for the Efficient Expansion of Primary Human Hepatocytes 0.45
Stranded RNA-seq were performed on total RNA following ribosomal RNAs depletion (Ribo-zero removal kit, illumina) for 3 brain , 8 IDHwt and 5 IDHmut glioma samples. 0.45
Molecular Criteria for Defining the Naive Human Pluripotent State 0.44
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 0.43
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 0.43
A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations 0.41
Profiling gene expression changes in primary ovarian tumors compared to matched normal fallopian tubes 0.39
Rapid neurogenesis through transcriptional activation in human stem cell (RNA-Seq) 0.38
Gene expression profiles of ibrutinib-responsive and ibrutinib non-responsive cells in ERBB4 expressing cancer cell lines 0.38
Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR+ Populations with Stem Cell Properties 0.37
The Wnt/β-catenin-signaling pathway is modulated by androgen ablation therapy for advanced clinical prostate cancer and contributes to androgen independent cell growth 0.35
RNA-Seq of cKIT+ sorted cells from 16-16.5 week old fetal testes and ovaries and RNA-Seq of TRA-1-60+ H1 hESCs 0.34
Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed 0.34
Comparison of 7 small cell lung cancer PDX models, cultured ex vivo, for response to LSD1 inhibitor RG6016/ORY1001 0.32
eRNA: A graphic user interface-based tool for RNA sequencing data analysis [mRNA-Seq] 0.31
eRNA: A graphic user interface-based tool for RNA sequencing data analysis 0.31
Next Generation Sequencing identifying the dosage compensation state in human endometrial carcinoma and adjacent tissues 0.31
Transcriptome data of temporal and cingulate cortex in the Rett syndrome brain 0.3
PolyA-sequencing in IMR-32 neuroblastoma cells with shRNA mediated depletion of CDK12, CDK13 or GFP. 0.29
Ex vivo Dynamics of Human Glioblastoma Cells in a Microvasculature-on-a-Chip System Correlates with Tumor Heterogeneity and Subtypes 0.29
Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 [RNA-seq] 0.28
Modelling and rescuing neurodevelopmental defect of Down syndrome using induced pluripotent stem cells from monozygotic twins discordant for trisomy 21 0.28
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP 0.28
Enriched retinal ganglion cells derived from human embryonic stem cells (RNA-seq) 0.25
ENCODE Cold Spring Harbor Labs Long RNA-seq 0.23
Gene expression profiles of active and restricted R/G-HIV+ primary human fetal astrocytes 0.22
PolyA-sequencing in IMR-32 cells treated with THZ531 or DMSO 0.21
Engineered human pluripotent stem cell-derived intestinal tissues with a functional enteric nervous system 0.2
Reversing Abnormal Neural Development by Inhibiting OLIG2 in Down Syndrome Human iPSC Brain Organoids and Neuronal Mouse Chimeras 0.2
Myc activation coordinates gene transcription and protein translation responses 0.2
The chromatin modifier CHD8 targets autism risk genes during human neurodevelopment  0.19
Next Generation Sequencing Analysis of human embryonic stem cells derived MESP1-mTomato reporter cells 0.17
Stochastic genome - nuclear lamina contacts are linked to histone H3K9 dimethylation (RNA-seq data) 0.17
Stochastic genome - nuclear lamina contacts are linked to histone H3K9 dimethylation 0.17
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 0.17
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 0.17
Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence 0.14
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes] 0.14
Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells 0.12
Aberrant splicing in B-cell acute lymphoblastic leukemia [B-ALL] 0.11
CD8+ T cells regulate tumor ferroptosis during cancer immunotherapy 0.11
RNA-seq data 0.1
Deep sequencing of transcript levels of human embryonic stem cell derived mesothelium (epithelial and mesenchymal forms) and mesothelium from neonatal mouse E15.5 of the heart, lung, liver and gut and ChIP-seq data of the mesenchymal form of mesothelium 0.1
Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes 0.09
RNAseq in Alzheimer's Disease patients 0.09
Engineering Patient-Specific Tissue Implants 0.09
The WNT target SP5 negatively regulates WNT transcriptional programs in human pluripotent stem cells 0.08
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 0.07
Cell cycle positioning drives heterogeneity within the pluripotent stem cell compartment 0.07
RNA-seq of SCLC PDX models treated with EP 0.07
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 0.07
A compendium of promoter-centered long-range chromatin interactions in diverse human tissues and cell types 0.07
m6A/m-Seq of human B-lymphocyte cell lines from healthy controls and major depressive disorder patients 0.02
The role of m6A/m-RNA methylation in stress response regulation 0.02


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