Gene Query: KCTD16

Dataset Description Geneva Score
FUS mutant human motoneurons transcriptome analysis reveals altered pathways and impairment of microRNA function 40.94
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response 35.31
Transcriptome analysis of H9 hESC derived cerebral organoids 25.06
Entrectinib Resistance in a Neuroblastoma Xenograft Model 23.21
Appropriately Differentiated ARPE-19 Cells Regain a Native Phenotype and Similar Gene Expression Profile 20.32
RNA-seq identifies novel lncRNAs involved in vascular smooth muscle cell proliferation 18.64
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury 17.9
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury [human iPS] 17.9
Regulation of Lipids is Central to Replicative Senescence 17.64
Ascorbate Suppresses VEGF Expression in Retinal Pigment Epithelial Cells 15.44
Transcriptomic analysis of effect of oncolytic measles virus (MV) on transformed and non-transformed bone marrow-derived mesenchymal stem cells (MSCs) 15.08
Transcriptomic profiling of normal human cardiac fibroblast treated with halofuginone 14.6
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 14.44
Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma 13.56
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 12.24
Gene expression in mature and immature human ES-derived beta cells, and sorted beta-cells from adult islets 11.14
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain [RNA-Seq] 11.07
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain 11.07
Inhibitors of the histone methyltransferases EZH2/1 induce a potent antiviral state and suppress infection by diverse viral pathogens [RNA-Seq] 9.97
Inhibitors of the histone methyltransferases EZH2/1 induce a potent antiviral state and suppress infection by diverse viral pathogens 9.97
CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation 9.96
Cerebellar differentiation in Ataxia-Telangiectasia 9.8
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability 9.37
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq] 9.37
Impact of HypERrlnc Knockdown on the human pericyte transcriptome 8.98
PANCR, the PITX2 adjacent noncoding RNA, is specifically expressed in human left atria and regulates PITX2c expression 8.76
Investigation about fibroblasts of different origins in culture 8.64
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [RNA-seq] 8.63
Comparison of small cell lung cancer PDX model FHSC04 for response to LSD1 inhibitor RG6016/ORY1001 8.23
Gene expression analysis of a panel of human fibroblasts that generate an aligned (anisotropic) vs non-aligned extracellular matrix 8.09
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] 7.28
RNAseq in Alzheimer's Disease patients 7.25
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq] 7.11
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas 7.11
Deletions in the ATAD3 gene cluster cause cerebellar developmental defects with mitochondrial DNA abnormalities owing to local cholesterol insufficiency 7.03
Toxoplasma gondii infection of human retinal pigment epithelial cells 6.98
Tumor exosome integrins determine organotropic metastasis 6.78
A SRp55-regulated alternative splicing network controls pancreatic beta cell survival and function 6.76
Treatment Paradigms for Retinal and Macular Diseases Using 3-D Retina Cultures Derived From Human Reporter Pluripotent Stem Cell Lines 6.67
RNA-Seq of the corpus callosum from 12 individuals 6.6
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data 6.56
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_human] 6.26
ZNF804A transcriptome networks in differentiating human neurons derived from induced pluripotent stem cells 5.97
RNA-seq of human fibroblasts after irradiation 5.87
Integrated Systems Biology Analysis of KSHV Latent Infection Reveals Viral Induction and Reliance on Peroxisome Mediated Lipid Metabolism 5.86
Effect of digoxin treatment on the gene and alternative splice expression in human pluripotent stem cells- derived mesenchymal stem cells 5.63
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 5.59
Defective removal of ribonucleotides from DNA promotes systemic autoimmunity 5.5
Cellular acidosis triggers MondoA transcriptional activity by driving mitochondrial ATP production 5.33
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons 5.31
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons 5.22
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons [RNA-Seq] 5.22
A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks 5.01
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes [RNA-Seq] 4.8
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes 4.8
RNA-seq analyisis of PUM2 knockout cells 4.77
Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals 4.72
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [RNA-Seq_Hs] 4.65
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis 4.65
NEUROD1 dependent gene regulation in murine pancreatic endocrine cells and human stem cell derived insulin producing cells 4.56
Rna-seq transcriptome data for insulin-GFP+ cells differentiated from NEUROD1 knock out and NEUROD1+/+ control human embryonic stem cells. 4.56
A peninsular structure coordinates asynchronous differentiation with morphogenesis to generate pancreatic islets [bulk vs buds] 4.54
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia [RNA-seq] 4.49
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia 4.49
The age and genomic integrity of neurons after cortical stroke in humans 4.44
Propargite, an environmental chemical, interacts with GWAS identified diabetes genes to impact human pancreatic β-cell death 4.33
RNA-seq of SOX5 overexpressing primary human neuronal progenitors 4.22
Molecular analysis of renal cell carcinoma with unclassfied histology 4.06
Molecular analysis of renal cell carcinoma with unclassfied histology [gene expression] 4.06
CHCHD2 gene KO effect in iPSC drived motor neurons 3.98
Genome-wide profiling of siRNA targeting EWS-FLI1 in TC32 Ewing sarcoma cell line 3.95
In vivo genome editing restores dystrophin expression in Duchenne muscular dystrophy patient muscle fibers 3.88
Ebola virus (EBOV) infection of ARPE-19 cells 3.84
Derivation of kidney organoids from human pluripotent stem cells [RNA-Seq: Data Set 1] 3.77
Mastermind-like 3 controls proliferation and differentiation in neuroblastoma (RNA-seq) 3.75
Mastermind-like 3 controls proliferation and differentiation in neuroblastoma 3.75
circRNA-sequencing 3.75
The histone variant H3.3 G34W substitution in giant cell tumor of the bone link chromatin and RNA processing [RNA-seq] 3.42
Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed 3.42
Single-cell analysis of human kidney organoids 3.42
Differential susceptibility of human pleural and peritoneal mesothelial cells to asbestos exposure 3.38
Comparing gene expression in iPSC derived RPE from control and AMD donors 3.34
Single Cell Sequencing Reveals Gene Expression Signatures Associated with Bone Marrow Stromal Cell Subpopulations and Time in Culture [NGS_bulk cell RNA-seq] 3.34
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 3.19
Synaptic dysfunction in human neurons with Autism associated deletions in PTCHD1-AS 3.18
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 3.09
Redifferentiation of expanded human islet β cells by inhibition of ARX 3.0
RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms, and GTPase binding in bipolar disorder 2.97
Repurposing of promoters and enhancers during mammalian evolution 2.86
Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors 2.83
DNA damage signaling mediates the functional antagonism between replicative senescence and terminal muscle differentiation 2.8
Alteration of the microRNA network during the progression of Alzheimer’s disease 2.79
Identification of a LIF-responsive replication-competent human β cell 2.78
Subcellular pathways shared by afflicted patients and mutant mice identify a new drug treatment for aortic aneurysm in Marfan syndrome 2.74
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 2.7
Transcriptomic analysis of cultured isogenic myotonic dystrophy type 1 myoblasts with and without the DMPK CTG repeat 2.66
Prostaglandin E2 inhibits pro-fibrotic function of human pulmonary fibroblasts by disrupting Ca2+-signaling 2.63
Statins modulate endothelial transcriptional profile by inhibiting EZH2 2.63
A role for ZNF598 in post-transcriptional gene regulation 2.62
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [d7+d14] 2.61
Engineering Patient-Specific Tissue Implants 2.59
The Glioma-Infiltrating T Cell Receptor Repertoire 2.59
The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders 2.55
The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders [lnc-Nr2f1 overexpression] 2.55
Identifying deer antler proliferation and mineralization genes using comparative RNA-seq 2.55
Transcriptome data of temporal and cingulate cortex in the Rett syndrome brain 2.54
Targeting Taxane-Platin Resistant Lung Cancers with JumonjiC Lysine Demethylase Inhibitors (RNA-Seq) 2.48
Targeting Taxane-Platin Resistant Lung Cancers with JumonjiC Lysine Demethylase Inhibitors 2.48
Next Generation RNA Sequencing Analysis of AMPK Wild Type, AMPKα-KO and AMPKα1-2A U2OS cell Transcriptomes 2.48
Studying iPSCs from a hibernating mammal reveals molecular mechanisms of cold resistance in neural tissues 2.38
Gene expression profiles of ibrutinib-responsive and ibrutinib non-responsive cells in ERBB4 expressing cancer cell lines 2.35
A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations 2.33
RNA-Seq comparative analysis of human neuroblastoma cells before and after their confrontation to the embryonic microenvironment 2.31
Disruption of GRIN2B impairs differentiation in human neurons 2.29
RNA-seq of cancer-associated fibroblasts (CAF) treated with PBS or extracellular vesicles (EV) from MCF10A or MDA-MB-231 cells 2.25
Stranded RNA-seq were performed on total RNA following ribosomal RNAs depletion (Ribo-zero removal kit, illumina) for 3 brain , 8 IDHwt and 5 IDHmut glioma samples. 2.24
FGF2 regulation of gene expression in stable inducible Neurons 2.21
Modulation of ESRP2 and MBNL2 in normal kidney and clear cell renal cell carcinoma cell lines for analysis of stability programs 2.21
SMN deficiency in spinal muscular atrophy causes widespread intron retention and DNA damage 2.2
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 2.15
PML2-mediated thread-like nuclear bodies mark late senescence in Hutchinson–Gilford progeria syndrome 2.15
PML2‐mediated thread‐like nuclear bodies mark late senescence in Hutchinson–Gilford progeria syndrome [RNA-seq] 2.15
Vitamin d receptor-mediated stromal reprogramming suppresses pancreatitis and enhances pancreatic cancer therapy 2.15
Differential gene expression of static and intermittent compressive force treated human periodontal ligament cells 2.12
Identification and Initial Functional Characterization of SENCR, a Long Non-Coding RNA Enriched in Human Vascular Cells 2.09
RNA-seq of H1299 cells in which either PRKCI or SOX2 was silenced by validated lentiviral shRNA constructs 2.09
Long non-coding RNA SMILR regulates genes involved in cytokinesis in human vascular smooth muscle cell 2.06
Coordinated control of senescence by lncRNA UCA1 and a novel CAPERα/TBX3 co-repressor 2.05
Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors 2.02
Tricyclic Antidepressants Induce Inactivation of Hepatic Stellate Cell (HSC) Myofibroblasts 2.01
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes] 1.98
Prolyl hydroxylation regulates protein degradation, synthesis, and splicing in human induced pluripotent stem cell-derived cardiomyocytes 1.96
Generation, transcriptome profiling, and functional validation of cone-enriched human retinal organoids 1.95
RNA-seq analysis of A2780 and OVCAR3 human ovarian cancer cell lines after overexpression of collagen type XI alpha 1 (COL11A1) 1.94
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (ALK) 1.88
Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma using high throughput RNA sequencing 1.86
Analysis of human ES cell differentiation establishes that the dominant isoforms of the lncRNAs RMST and FIRRE are circular 1.82
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes 1.77
Impeding transcription of expanded microsatellite repeats by deactivated Cas9 1.71
EGR1-controlled transcriptome of T HESCs 1.67
Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency 1.61
A transcriptional regulatory network connects mitochondrial biogenesis and metabolic shift with stem cell commitment to hepatic differentiation 1.57
Effects of Freeze-Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression 1.55
Comparative analysis of mesenchymal stem cells derived from amniotic membrane, umbilical cord and chorionic plate under serum-free condition 1.53
Mutational landscape of splicing genes and functional consequences across 33 cancer types 1.52
Mining the stiffness-sensitive transcriptome in human vascular smooth muscle cells identifies long non-coding RNA stiffness regulators 1.52
Safety profiling of genetically engineered Pim-1 kinase overexpression for oncogenicity risk in human c-kit+ cardiac interstitial cells 1.5
MYT1 attenuates neuroblastoma cell differentiation by inhibiting retinoic acid signaling pathway 1.49
The histone H3.3K27M mutation in pediatric glioma reprograms H3K27 methylation and gene expression 1.46
Dissection of estrogen receptor alpha signaling pathways in osteoblasts using RNA-sequencing 1.43
RNAseq of Extracellular vesicle RNAs and cellular RNAs from HPASMCs with or without TGF-b1 or BMP4 treatment 1.41
RNA sequencing for PDX1, NGN3 and MAFA transduced iPSCs cell 1.41
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence [RNA-seq] 1.38
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence 1.38
Generation of trichogenic adipose-derived stem cells by expression of three factors 1.38
Differentially expressed genes during pancreatic bud differentiation in cellular aggregates 1.35
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP 1.34
Epigenetic alterations affecting transcription factors and signaling pathways in stromal cells of endometriosis 1.3
Epigenetic alterations affecting transcription factors and signaling pathways in stromal cells of endometriosis: Expression data (RNA-seq) 1.3
Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia [shRNA] 1.27
Identification of expressed and conserved human non-coding RNAs 1.25
The impact of pro-inflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes 1.24
Generation of Brain Region-specific Organoids using a Miniaturized Spinning Bioreactor and Modelling ZIKV Exposure 1.24
RNA-seq analysis to identify the genes regulated by p53-SET interplay 1.23
a-synuclein accumulation in an iPSC derived model of early onset sporadic Parkinson’s Disease reveals novel drug targets 1.22
An aspartyl protease defines a novel pathway for export of Toxoplasma proteins into the host cell 1.18
LINE-2 transposable elements are a source of functional human microRNAs and target sites 1.17
Regionally specified human pluripotent stem cell-derived astrocytes 1.16
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 1.12
RNA-seq analysis of Retinoic Acid and Non-treated Control hiPSCs 1.12
mTOR hyperactivation in Down Syndrome mediates deficits in autophagy induction, autophagosome formation, and mitophagy 1.12
Global Gene Expression Changes in Cholangiocytes Treated with TGF-beta 1.07
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential 1.07
mRNA cap methyltransferase, RNMT-RAM, promotes RNA pol II transcription 1.07
RNA-seq of cells with TET1 knockout 1.05
mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress 1.05
mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress [human] 1.05
Network-based, cross-cohort discovery of transcriptional mechanisms presiding over maintenance of high-risk neuroblastoma subtype state 1.04
Universal alternative splicing of noncoding exons 1.04
RNA-Seq characterization of human H1-derived NPC differentiation timecourse 1.02
Nucleotide excision repair capacity increases during differentiation of human embryonic carcinoma cells into neurons and muscle cells 1.02
Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk [RNA-seq] 1.01
Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk 1.01
nELAVL HITS-CLIP in Alzheimer's Disease patients 1.0
RNA-Seq of human induced pluripotent stem cell-derived cardiomyocytes from a cardiomyopathy patient and familial control 1.0
RNA-seq from control and macroH2A1-depleted IMR90 primary human lung fibroblasts 0.99
Exploring the role of macroH2A1 in transcription regulation in IMR90 primary human lung fibroblasts with RNA-seq and ChIP-seq 0.99
Novel kinase fusion oncogenes in post-Chernobyl radiation-induced pediatric thyroid cancers 0.99
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.95
Examining serotonergic neuron differentiation from human iPSCs 0.94
Transcriptional responses of human insulinoma cells to acute cytokine exposure 0.93
Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq 0.92
The impact of stanniocalcin 1 on the transcriptome of human cord blood stem/progenitors 0.92
Transcriptome analysis reveals malignant and hypoxic signature of glioblastoma 0.91
NGS based identification of GD2-positive tumor-specific phenotype for cancer diagnostics and therapy 0.9
RNAseq of quiescent (Q) and stress induced premature senescent (SIPS) fibroblasts treated with plant extract (1201) from Solidago vigaurea subspecies alpestris 0.9
R430: A potent inbibitor of DNA and RNA viruses 0.9
RNA-Seq Analysis in purified iPS cell-derived neuronal samples 0.89
Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing 0.89
Transcriptomic Profiling of Posterior Polymorphous Corneal Dystrophy 0.88
Response of HEK293 Freestyle cells to 36 h of culture in Zn(II)-depleted Freestyle medium 0.87
Restoration of Progranulin Expression Rescues Cortical Neuron Generation in Induced Pluripotent Stem Cell Model of Frontotemporal Dementia 0.87
Next Generation Sequencing Facilitates Quantitative Analysis of Human Primary and Pluripotent Stem Cell-Derived Epicardial Cell Transcriptomes 0.86
Next-generation sequencing reveals a novel role of lysine-specific demethylase 1 in adhesion of rhabdomyosarcoma cells 0.84
Next-generation sequencing reveals a novel role of lysine-specific demethylase 1 in adhesion of rhabdomyosarcoma cells [RNA-seq] 0.84
Effects on gene expression of doxorubicin in human stem cells-derived cardiomyocytes 0.84
Chemical Enhancement of Direct Cardiac Reprogramming In Vitro and In Vivo 0.84
Expansion of adult human pancreatic tissue yields organoids harbouring progenitor cells with endocrine differentiation potential 0.84
LMO1 Synergizes with MYCN to Promotes Neuroblastoma Initiation and Metastasis 0.83
Increased Neanderthal ancestry in genomic regions associated with lipid catabolism in contemporary Europeans 0.83
RNA-seq data of small cell carcinoma of the bladder (SCCB) /urothelial carcinoma (Non-SCCB) clinical samples, and bladder-PARCB cell lines 0.83
Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer 0.83
Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs 0.81
C9orf72 Intermediate Repeats are Associated with Corticobasal Degeneration, Increased C9orf72 Expression and Disruption of Autophagy 0.81
Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes 0.8
RNA-seq data from human SGBS adipocytes differentiated with marine oxohexadecenoic acids 0.79
Gene expression alterations of pancreatic intraepithlial neoplasia 0.79
STX4 Over-Expression in Human islets 0.78
Total RNA deep sequencing (ribosomal depleted) of human umbilical vein endothelial cells exposed to hypoxia (0.2%) for 12h and 24h or kept under normoxic conditions. 0.78
Endothelial gene expression analysis 0.78
Modulation of mitochondrial DNA copy number to induce hepatocytic differentiation of human Amniotic Epithelial cells 0.78
Comparing effects of perfusion and hydrostatic pressure on human chondrocytes using gene profiles 0.77
RNA editing in nascent RNA affects pre-mRNA splicing 0.77
Single-cell RNA-Seq Investigation of Foveal and Peripheral Expression in the Human Retina 0.77
Exploiting drug addiction mechanisms to select against MAPKi resistant melanoma 0.76
High throughput analysis of three human adipose cell lines PAZ6, SGBS and SW872 0.76
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 0.74
Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain 0.73
Transcriptomics analysis of enteroendocrine cells following vertical sleeve gastrectomy 0.72
Transcriptomics analysis of human jejunal enteroendocrine cells after vertical sleeve gastrectomy 0.72
Transcriptome profiling of Caki2 cells re-expressing Polybromo-1 (PBRM1) 0.72
Activity-dependent transcriptional changes in human neurons 0.71
Global transcriptional profiling changes upon knockout of USP22 in human Non-small cell lung cancer cells 0.71
Transcriptomic and Epigenomic analysis of Huntington's disease and control patient iPSC-derived neural cells 0.7
mRNAseq of Huntington's disease and control patient iPSC-derived neural cells 0.7
Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells 0.7
Cellular recruitment by podocyte-derived pro-migratory factors in assembly of the human renal filter 0.7
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [RNA-seq] 0.69
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells 0.69
Perivascular signals alter global genomic profile of glioblastoma and response to temozolomide in a gelatin hydrogel 0.68
Systems-level analyses reveal a convergent pathway for progression of diffuse astrocytoma and potential role for resveratrol in delaying high-grade transformation 0.67
TGFβ1-mediated functional inhibition of mesenchymal stromal cells in MDS and AML 0.66
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug 0.66
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human] 0.66
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of human mesenchymal stem cells differentiation from human embryonic stem cells and adult bone marrow mesenchymal stem cells 0.66
Pericyte-like cells generated from human pluripotent stem cells support hematopoietic stem and progenitors ex vivo 0.65
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 0.65
Bone marrow-derived and dental pulp-derived human mesenchymal stem cell RNA-Seq 0.64
Cell-specific expression and function patterns of microRNA-150-5p in liver fibrogenesis 0.63
RNA-Seq Analysis in hES/ iPS cell-derived neuronal samples 0.63
Atheroprotective flow alters EZH2/H3K27me3 dependent transcriptional profile in human endothelial cells 0.63
iPSCs Reveal Protective Modifiers of the BMPR2 mutation in Pulmonary Arterial Hypertension 0.63
Biosynthesis of histone messenger RNA employs a specific 3' end endonuclease 0.61
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples 0.61
Overexpression of Claspin and Timeless protects cancer cells from replication stress in a checkpoint-independent manner 0.61
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 0.61
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 0.61
Analysis of active enhancers and direct androgen receptor target genes in VCaP prostate cancer cells 0.61
Gene expression patterns define the hepatocyte-like cells derived by different strategies 0.6
Gene expression patterns define the hepatocyte-like cells derived by different strategies [RNA-seq] 0.6
ATRX is necessary for cellular senescence and represses HRAS to drive cells from quiescence into senescence [RNA-Seq] 0.6
ATRX is necessary for cellular senescence and represses HRAS to drive cells from quiescence into senescence 0.6
RUNX2/CBFB modulates the response to MEK inhibitors through activation of receptor tyrosine kinases in KRAS mutant colorectal cancer 0.6
UBC9 knockdown in bladder cancer T24 cell lines 0.6
The ribosomal prolyl-hydroxylase OGFOD1 decreases during cardiac differentiation, modulates translation and spliceosomal processes 0.6
Expression profiles of the four human major ectodermal lineages 0.59
A Brain Penetrant Mutant IDH1 Inhibitor Provides In Vivo Survival Benefit 0.59
Chemical Modulation of Glycolysis Regulates the KEAP1-NRF2 Pathway Through a Metabolite-Induced Posttranslational Modification 0.57
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique 0.57
Endothelial TGFb signaling drives vascular inflammation and atherosclerosis [bulk RNA-Seq] 0.56
Endothelial TGFb signaling drives vascular inflammation and atherosclerosis 0.56
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 0.54
RNA-seq of MCF10A cells and CAF 0.54
Deep sequencing of transcript levels of human embryonic stem cell derived mesothelium (epithelial and mesenchymal forms) and mesothelium from neonatal mouse E15.5 of the heart, lung, liver and gut and ChIP-seq data of the mesenchymal form of mesothelium 0.54
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion 0.54
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites (RNA-seq) 0.54
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites 0.54
Effect of hypoxia and TGFβ1 on gene expression in HPF fibroblast cells 0.53
E2F1 orchestrates transcriptomics and oxidative metabolism in Wharton’s jelly derived mesenchymal stem cells from growth-restricted neonates 0.53
Human iPSC derived glomeruli facilitate accurate modelling of podocytopathy 0.52
RNA sequencing reveals levamisole target genes PTPRZ1 and MDK and their links to interferon pathway in human podocytes 0.52
To identify transcripts that are differentially expressed in the MYCN amplified vs MYCN non-amplified cell lines using Next Generation Sequencing 0.52
Reassessment of Exosome Composition 0.51
O-glcnAc reprograms cellular energetics 0.51
Global gene expression profiles of cardiac progenitors differentiated from human pluripotent stem cells in 3D culture under simulated microgravity 0.51
Human iPSC-derived glomeruli provide an advanced model to interrogate podocyte biology and accurately recapitulate podocytopathy 0.5
Preliminary Report of Transplantation of Human Fetal Retinal Pigment Epithelial Cells on Age-related Macular Degeneration Patients 0.5
RNA-seq of SCLC PDX models treated with EP 0.5
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [ZNF787] 0.49
PRRX2 and HEY2 double knock-down facilitates ASCL1-induced neuron conversion in human dermal fibroblasts. 0.49
Reconstruction of the Human Blood-Brain Barrier in vitro reveals a Pathogenic Mechanism of APOE4 in Pericytes 0.49
Integrated Multi-omic Analysis of Esthesioneuroblastomas Identifies Two Subgroups Linked to Cell Ontogeny 0.49
Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging 0.49
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells [RNA-seq] 0.48
JMJD3 and UTX Determine Fidelity and Lineage Specification of Human Neural Progenitor Cells 0.48
Identification of mesothelial-to-mesenchymal gene signature in ascitic fluid-isolated mesothelial cells through RNA-sequencing 0.48
RNA sequencing analysis of human podocytes reveals glucocorticoid regulated gene networks targeting non-immune pathways 0.48
Differentially expressed vascular development genes for iPSC-ECs from CDI 0.48
Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription [RNA-Seq] 0.47
Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription 0.47
Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease 0.46
Analysis Of The TGFb-Induced Program In Primary Airway Epithelial Cells Shows Essential Role Of NF-kB/RelA Signaling Network In Type II Epithelial Mesenchymal Transition 0.46
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites 0.46
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification 0.46
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq] 0.46
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 0.45
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 0.45
Multiple waves of transcriptome changes during extended hypoxic induction in human pulmonary microvascular endothelial cells 0.45
Mesothelioma xenografts in nude mice: PBS treated versus pirfenidone treated 0.45
Epigenetic modulation of β-cells by interferon-α via PNPT11-miR-26a-TET2 triggers autoimmune diabetes 0.44
Epigenetic modulation of β-cells by interferon-α via PNPT11-miR-26a-TET2 triggers autoimmune diabetes [RNA-seq] 0.44
Comparison of 7 small cell lung cancer PDX models, cultured ex vivo, for response to LSD1 inhibitor RG6016/ORY1001 0.44
Necroptosis inhibition protects from dopaminergic neuronal cell death in OPA1 mutant Parkinson’s disease patient neurons and MPTP treated mice 0.44
The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation 0.44
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 0.44
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 0.44
Studying the selectivity of a small molecule Synucleozid on transcriptome 0.43
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration [RNA-seq2] 0.43
RNA Seq analysis of NKX2-5 Null and Het human embryonic stem cells in cardiomyogenesis 0.43
Next Generation Sequencing of human SMA and healthy control Motor Neurons 0.42
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq] 0.42
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) 0.42
Brain organoids reproducibly generate the cellular diversity of the human cerebral cortex 0.41
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 0.41
Efficient direct reprogramming of c-Kit− mature amniotic cells into endothelial cells by ETS factors and TGFβ suppression 0.41
Histone Demethylases KDM3A and KDM4C regulate mesenchymal stromal cell senescence and bone aging through condensin-mediated heterochromatin organization 0.4
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 0.4
Transcriptional repression in hypoxia is mediated by the Sin3A histone deacetylase complex [RNA-seq] 0.4
RNA-Seq of LRRK2 G2019S Parkinson’s iPSC-derived astrocytes 0.39
CHD1 regulates cell fate determination by activation of differentiation-induced genes 0.39
Bromodomain inhibition of the co-activators CBP/EP300 facilitates reprogramming (RNA-seq fibroblasts) 0.39
Bromodomain inhibition of the co-activators CBP/EP300 facilitates reprogramming 0.39
Modeling human brain evolution using induced pluripotent stem cells: comparative analysis of neuronal development in humans and chimpanzees 0.39
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_RNA-seq] 0.39
Transcriptomic insights into human decidual and peripheral blood CD4 T cells 0.39
Transcriptomic analysis of human neural progenitor cells differentiation into astrocytes 0.38
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing (Total RNA sequencing) 0.38
Oncogenic changes and EMT in normal human bile duct epithelial cells are caused by parasite-derived materials and N-nitrosodimethylamine 0.38
Transcriptome Analysis and Functional Identification of Adipose-Derived Mesenchymal Stem Cells in Secondary Lymphedema 0.38
RNA deep sequencing analysis of human brain microvascular endothelial cells (ECs) treated with glioma-conditioned medium (glioma-CM) 0.38
Downregulation of DDX5/DDX17 and REST 0.38
DUX4-induced histone variants H3.X and H3.Y mark DUX4 target genes for expression (RNA-seq) 0.37
DUX4-induced histone variants H3.X and H3.Y mark DUX4 target genes for expression 0.37
MEK inhibition rewires enhancer landscapes in RAS-driven Rhabdomyosarcoma to unlock a myogenic differentation block 0.37
Epigenetic Reprogramming of mutant RAS-driven Rhabdomyosarcoma via MEK Inhibition 0.37
Progressive motor neuron pathology and the role of astrocytes in a human stem cell model of VCP-related ALS 0.37
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells [Endoderm RNA-seq and ChIP-seq data sets] 0.37
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells 0.37
Derivation and differentiation of haploid human embryonic stem cells [RNA-Seq 1] 0.37
Reconstitution of the human pancreatic niche stimulates differentiation of hESCs into beta cells and reveals new signals for pancreatic endocrine cell maturation 0.36
Human iPSC-based Modeling of Late-Onset Disease using Progerin-induced Aging 0.36
Transcriptome changes due to nuclear penetration of cancer extracellular vesicles 0.35
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells 0.35
RNA-seq characterization of downstream effects of upregulating SMN2 via down-regulating PRC2 or blocking the PRC2:SMN-AS1 interaction with a mixmer oligonucleotide 0.35
Gene expression regulated by CSA and CSB in neuroblastoma cell line 0.35
Transcriptomic analysis of the effect of trastuzumab in human iPSC-CMs 0.34
UV-Irradiation Induces a Noncoding RNA that Functionally Opposes the Protein Encoded by the Same Gene 0.34
Human islets of varying quality: the good, the (not so) bad and the ugly 0.34
Microsatellite expansion RNA visualization, elimination, and reversal of molecular pathology by RNA-targeting Cas9 0.34
Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24 0.33
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq] 0.33
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells 0.33
Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells that Contribute to the Fibrous Cap 0.33
Kidney compartment specific eQTL studies highlight causal genes and pathways for renal disease development 0.33
Serotonin-induced hyperactivity in SSRI-resistant major depressive disorder patient-derived neurons 0.33
RNA-sequencing of healthy human skeletal myocytes 0.33
Expression alterations induced by restoration of AXIN1 expression in SNU449 hepatocellular carcinoma cells 0.32
Robust generation of honemogeneous midbrain organoids with in vivo–like cellular composition facilitates neurotoxin-based Parkinson’s disease modeling 0.32
RNA-seq after siRNA targeting DDX24 applied to iHUVECs cell lines 0.31
Genetic and Epigenetic Landscapes of Laterally Spreading Tumors of the Colorectum 0.31
Identification and validation of differentially expressed transcripts by RNA-Sequencing of formalin-fixed, paraffin-embedded (FFPE) lung tissue from patients with Idiopathic Pulmonary Fibrosis 0.3
Genome wide mapping of long noncoding (lnc) RNAs in hepatic stellate cells 0.3
Nucleoporin-mediated regulation of cell identity genes 0.3
Quantitative comparison between cellular mRNAs and exosomal mRNAs in human iPSC-derived motor neurons 0.29
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 0.29
A transcriptome dataset revealing the molecular features of breast cancer stem cells 0.29
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 0.28
Global epigenomic reconfiguration during mammalian brain development 0.28
Transcriptomic profiling of mesenchymal stem cells (MSC) differentiation into mesangial cells 0.28
Networks of cultured iPSC-derived neurons reveal the human synaptic activity-regulated adaptive gene program 0.27
Next Generation Sequencing Facilitates Comparisons of Control and Schizophrenia-Patient derived hiPSC-derived neurons 0.27
hiPSCs unravel aberrant TGFβ signaling as an etiology of left ventricular non-compaction 0.26
Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq 0.26
Transcriptome analyses of iPSC-derived neural stem/progenitor cells and cerebral organoids from monozygotic twins discordant for schizoaffective bipolar disorder 0.25
circ-ZNF609 regulates G1-S progression in Rhabdomyosarcoma 0.25
CHCHD10 gene KO effect in iPSC drived motor neurons 0.24
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation 0.24
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation (RNA-Seq) 0.24
Transcriptomic profile of human embryonic renal corpuscles 0.23
Conversion of Human Fibroblasts to Stably Self-Renewing Neural Stem Cells with a Single Zinc-Finger Transcription Factor 0.23
Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 0.23
Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR+ Populations with Stem Cell Properties 0.23
RNA-seq of shEZH2 cells 0.22
Recapitulation of Human Neural Microenvironment Signatures in iPSC-Derived NPC 3D Differentiation 0.22
Enhancing human kidney organoid differentiation from pluripotent stem cells with high-throughput automation 0.21
Epigenetic siRNA and chemical screens identify SETD8 inhibition as a new therapeutic strategy of p53 reactivation in high-risk Neuroblastoma. 0.21
Transcriptomic analysis to underly the heterogeneity between 4 cellular models derived from patients diagnosed with pediatric high-grade gliomas under controlled atmosphere (modulation of oxygen level). 0.21
Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4 0.2
Long non-coding RNA TYKRIL controls pericyte function and survival in the cardiovascular and central nervous system through regulation of p53 activity and PDGFRß expression 0.2
Gene expression and chromatin organization changes in lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes 0.2
Gene expression and chromatin organization changes in lamin A/C haploinsufficient human induced pluripotent stem cell-derived cardiomyocytes [RNA-seq] 0.2
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 0.2
Derivation and differentiation of haploid human embryonic stem cells 0.2
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling 0.2
Multiple sclerosis and EAE 0.2
Human optic chiasm from healthy controls and multiple sclerosis patients 0.2
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 0.19
Hyper-excitability of Neurons generated from Patients with Bipolar Disorder 0.19
Next-generation sequencing of control and schizophrenia hiPSC derived NPC 0.19
Genome-wide transcriptome profiles in Control and Schizophrenia hiPSC-dervied NPC [RNA-seq] 0.19
Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production 0.19
mRNA Sequencing of Human PromoCells Using Random Primed mRNA-Sequencing Technique 0.19
Single Cell Analysis Reveals Unexpected Transcriptional Heterogeneity of Neural Progenitors in the Developing Human Cortex 0.18
Locally transplanted human urine-induced nephron progenitor cells contribute to renal repair in mice kidney with diabetic nephropathy 0.18
Intrahepatic MAIT cell gene expression revealed by RNA-seq 0.18
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq) 0.18
RNA Missplicing in Fuchs Endothelial Corneal Dystrophy 0.18
Human Tfh cell RNA bulk sequencing 0.18
The cohesin complex prevents Myc-induced replication stress 0.17
MULTI-seq: Universal sample multiplexing for single-cell RNA sequencing using lipid-tagged indices 0.17
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 0.17
Generation of Patient-Matched Malignant and Normal Primary Cell Cultures from Clear Cell Renal Cell Carcinoma Patients 0.17
Human Cactin interacts with DHX8 and SRRM2 to assure efficient pre-mRNA splicing and sister chromatid cohesion. 0.17
Transposon-based construction of strand-specific RNA-seq libraries 0.17
Effect of SF3B1 suppression in cancer cells with different SF3B1 copy-number levels 0.17
Self-organized cerebral organoids with human specific features predict effective drugs to combat Zika virus infection 0.16
Self-organized cerebral organoids with human specific features predict effective drugs to combat Zika virus infection [RNA-seq] 0.16
Rapid neurogenesis through transcriptional activation in human stem cell (RNA-Seq) 0.15
Joint-specific DNA transcriptome signatures in rheumatoid arthritis [RNA-seq] 0.15
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 0.15
mRNA expression data from ESCs derived by polar body transfer reconstructed embryos (PBTESCs) 0.15
Identification of gene signature in ascitic fluid-isolated mesothelial cells from high grade serous ovarian cancer patients 0.15
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) 0.15
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships 0.15
Inhibition of H3K4 demethylation induces autophagy in cancer cell lines 0.15
Transcriptomes of iPSC-derived and post-mortum Hypothalamus Neurons from obese and control donors 0.14
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG 0.14
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG functional reactivation [human cells RNA-seq] 0.14
Differential gene expression in Jagged1 treated human dental pulp cells. 0.14
Comparative analysis of WT and ZEB1 KO cells in different stages during differentiation 0.14
Convergent roles of ATF3 and CSL in chromatin control of CAF activation [RNA-seq] 0.13
Convergent roles of ATF3 and CSL in chromatin control of CAF activation 0.13
Transcriptome profiling of the interconnection of pathways involved in malignant transformation and response to hypoxia 0.13
Differentiation of Induced Pluripotent Stem Cells towards Mesenchymal Stromal Cells is Hampered by Culture in 3D Hydrogels 0.13
Differentiation of Induced Pluripotent Stem Cells towards Mesenchymal Stromal Cells is Hampered by Culture in 3D Hydrogels [RNA-Seq] 0.13
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.12
Wnt5a and its downstream transcription factor Stat3 are therapeutic targets for diffuse intrinsic pontine gliomas 0.12
The LIN28B/let-7 axis is a novel therapeutic pathway in Multiple Myeloma 0.12
RNA-Seq identifies condition-specific biological signatures of ischemia-reperfusion injury in the human kidney 0.11
Genes altered in expression by Cisplatin treatment in lung cancer cell lines 0.11
Identification of microRNA-dependent gene regulatory networks driving human pancreatic endocrine cell differentiation [H1 RNA-seq] 0.11
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 0.11
A Phase II Study of Pomalidomide, Daily Low Dose Oral Cyclophosphamide, and Dexamethasone in Relapsed/Refractory Multiple Myeloma 0.1
In vitro modeling of human germ cell development using pluripotent stem cells 0.1
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies 0.1
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies [RNA-Seq] 0.1
Transcriptome of iPSC-derived Cerebral Organoids with Heterozygous Knockout in CHD8 0.09
Alternative classification of glioblastoma based on BUB1B-inhibition sensitivity 0.09
RNA-sequencing of Wnt-dependent and Wnt-independent of Glioblastoma stem cell cultures 0.09
RNA-sequencing of highly pure synovial tissue macrophages reveals two distinct osteoarthritis subgroups that indicate different disease mechanisms. 0.08
A Novel Population of Human Cardiac Resident Mesenchymal Stem Cells 0.08
Transcriptional profile in dermal fibroblasts from patients with collagen VI related muscular dystrophy 0.08
Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence 0.08
Identification of microRNA-dependent gene regulatory networks driving human pancreatic endocrine cell differentiation [RNA-Seq III] 0.08
A next generation sequencing based approach to identify extracellular vesicle mediated mRNA transfers between cells 0.08
RNA-seq and small RNA-seq from WT and ADAR1 knockdown H9 lines and their differentiation to specific types of neurons 0.07
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours 0.07
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [RNA-seq] 0.07
RNA sequencing of prostate cancer and normal tissue from African Americans and European Americans 0.06
PRC2 specifies ectoderm lineages and maintains pluripotency in primed but not naïve ESCs 0.06
CD133hi, Notchhi, DP (double positive) and DN (double negative) in GBML8 and GBML20, both patient-derived glioblastoma tumorsphere cultures 0.06
FOXO1 is required for binding of PR on IRF4, novel transcriptional regulator of endometrial stromal decidualization 0.05
Progesterone receptor transcriptome and cistrome in decidualized human endometrial stromal cells 0.05
Progesterone Receptor- and FOXO1-dependent transcriptomes decidualized human endometrial stromal cells 0.05
ELP1 splicing correction reverses proprioceptive sensory loss in familial dysautonomia 0.05
Characterisation of the EZH2 regulated transcriptome in de novo transformed cells (RNA-Seq) 0.05
The conserved transcriptional landscapes in human spermatogenesis 0.04
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.04
Transcriptional profiling at the DLK1/MEG3 domain explains clinical overlap between imprinting disorders 0.04
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 0.04
mRNA sequencing of highly and lowly metastatic human colorectal cancer PDXs 0.03
Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer 0.03
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 0.03
Transcriptomic alterations in fibroblasts from Parkinson's disease patients carrying Parkin mutations 0.03
The mRNA expression analysis of psoriasis skin lesion mesenchymal stem cell 0.03
A stably self-renewing adult blood-derived induced neural stem cell exhibiting patternability and epigenetic rejuvenation 0.03
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq] 0.03
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development 0.03
Recurrent alterations of TNFAIP3 (A20) in T-cell large granular lymphocytic leukemia 0.03
TCF21 and Aryl-hydrocarbon receptor gene cooperate to activate a pro-atherosclerotic gene expression program 0.03
Transcriptomic analysis of inter- and intra-patient variation in human iPSC cardiomyocytes: Platform for precision medicine to predict drug toxicity 0.03
Discovery of a Drug Candidate for GLIS3-Associated Diabetes 0.03
HNF1A deficiency impairs β-cell fate, granule maturation and function 0.03
Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence [RNA-seq] 0.02
Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence 0.02
PLZF targets developmental enhancers for activation during osteogenic differentiation of human mesenchymal stem cells 0.02
PLZF targets developmental enhancers for activation during osteogenic differentiation of human mesenchymal stem cells (RNA-seq) 0.02
α Cell Function and Gene Expression Are Compromised in Type 1 Diabetes 0.02
Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome 0.02
ALS implicated protein TDP-43 sustains levels of STMN2 a mediator of motor neuron growth and repair 0.0


Contact Us

For scientific and technical queries contact Butte Lab @UCSF


Cite GENEVA Tool

Manuscript in Preparation