Gene Query: LMNB2

Dataset Description Geneva Score
RNA-seq of SOX5 overexpressing primary human neuronal progenitors 58.72
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia [RNA-seq] 52.68
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia 52.68
Expression level comparison under dividing and quiescent states in human primary fibroblasts 46.35
Gene expression changes caused by KRAS in MCF-10A 42.3
Paxillin regulates genomic networks in prostate cancer [LNCaP] 40.64
UBR7 is a novel E3 ubiquitin ligase for H2BK120 and acts as a tumor-suppressor in breast cancer 38.88
UBR7 is a novel E3 ubiquitin ligase for H2BK120 and acts as a tumor-suppressor in breast cancer [RNA-Seq] 38.88
Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging 38.49
Differential gene expression in Jagged1 treated human dental pulp cells. 38.48
STVI-120 Induction of differentiation in human epidermal stem cells followed by differential splicing analysis 37.96
PHF20 readers link methylation of histone H3K4 and p53 with H4K16 acetylation 36.75
RNA-seq of human foreskin fibroblast cells lacking RB and/or p130 after doxorubicin treatment 36.1
Studying the selectivity of a small molecule Synucleozid on transcriptome 34.54
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia 34.17
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia [RNA-seq] 34.17
RNA-seq in SUNE-1 cells after downregulation of DANCR expression 33.72
Global modulation of signaling pathways by SARM RAD140 in AR/ER+ breast cancer xenografts 33.58
Conservative alteration of chromosomal expression pattern across human solid tumor types 33.22
XBP1s Activation Globally Remodels N-Glycan Structure Distribution Patterns 32.74
GRHL2 is a key lineage determining factor which collaborates with FOXA1 to establish a targetable collateral pathway in the setting of endocrine therapy-resistant breast cancer (RNA-Seq data set 2) 32.62
Gene expression comparison of resting human peripheral-blood NK cells and activated counterparts 32.58
Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency [RNA-seq] 31.52
Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency 31.52
Reconstruction of the Human Blood-Brain Barrier in vitro reveals a Pathogenic Mechanism of APOE4 in Pericytes 31.49
ADAR1 controls apoptosis of stressed cells by inhibiting Staufen-mediated mRNA decay 30.86
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 29.94
RNA-sequencing in irradiated and normal A549 cells. 29.78
Transcriptome Sequencing of Adipose-Derived Mesechymal Stromal Cells 29.75
Hit-and-run' programing of CAR-T cells using mRNA nanocarriers 29.09
Transcriptomic analysis of cultured corneal endothelial cells as a validation for their use in cell-replacement therapy 28.93
RNA-Seq analysis of 4N and 2N RPE1 cells following polyploid induction via cytokinesis failure or Aurora kinase inhibition [tpo3] 28.46
Paxillin regulates genomic networks in prostate cancer [PC3] 28.38
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer 27.81
Genome-wide transcriptional response to random aneuploidy in human cells 27.7
Differential analysis of HOXA1 in adult cells at isoform resolution by RNA-Seq [Illumina] 27.7
Differential analysis of gene regulation at transcript resolution by RNA-Seq 27.7
Single-cell transcriptomics of the human placenta: inferring the cell communication network of the maternal-fetal interface 27.45
Transcriptional profiles of normal human mature B cells 27.36
Systematic discovery of endogenous human ribonucleoprotein complexes 26.6
Axitinib exposure triggers endothelial cells senescence through ROS accumulation and ATM activation 25.84
Global gene expression profiling from LeuCAG3'tsRNA depleted- HeLa and HCT-116 cell lines through 50 base pair paired-end RNA-seq 25.75
Network-based, cross-cohort discovery of transcriptional mechanisms presiding over maintenance of high-risk neuroblastoma subtype state 25.74
RNA-Seq analysis of 4N and 2N RPE1 cells following polyploid induction via cytokinesis failure by siRNA knockdown of Anillin [tpo8] 25.55
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites (RNA-seq) 25.47
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites 25.47
Gene induction by the USP6 oncogene in response to interferon 25.01
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [BAA] 24.94
RNA-Seq analysis RPE1 cells following exposure to Nutlin-3 to identify target genes of p53 [tpo12] 24.92
mRNA-Seq profiling of human developing kidney 24.57
RNA-seq of resting and activated CD4+ T cells +-JQ1 24.27
Mining the stiffness-sensitive transcriptome in human vascular smooth muscle cells identifies long non-coding RNA stiffness regulators 23.74
Endothelial gene expression analysis 23.55
Total RNA deep sequencing (ribosomal depleted) of human umbilical vein endothelial cells exposed to hypoxia (0.2%) for 12h and 24h or kept under normoxic conditions. 23.55
Proliferation pause as an early blockade of human cellular reprogramming toward pluripotency [RNA-seq analysis] 23.32
RNA-seq in untreated and flagellin-treated Human Intestinal Myofibroblast cells (HIMF) 23.2
PTEN suppresses neoplastic transformation of human neural stem cells by transcriptional repression of Pax7 23.1
Gene expression profiles of primary human NK cells before and after expansion on CSTX002 feeder cells, with and without IL-21 stimulation 22.25
Next Generation Sequencing Facilitates Quantitative Analysis of HIV-1 Latency in Central Memory T Cells 22.2
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [HCC1599_RNA-seq] 21.97
microRNA suppresses prostate cancer stem cells and metastasis by inhibiting a cohort of pro-metastasis targets including CD44, Rho GTPases and EZH2 21.71
Antibodies That Convert Bone Marrow Into Trafficking Microglia-Like Cells Reduce Brain Amyloid 21.63
ROR-γ drives androgen-receptor expression and represents a therapeutic target in castration-resistant prostate cancer 21.21
p63 controls the enhancer landscape during keratinocyte differentiation 21.19
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients 21.08
BASP1 modifies the Tamoxifen response 21.07
Montelukast counteracts the influenza virus-induced block in unfolded protein stress response and reduces virus multiplication 20.94
Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells 20.87
Metabolic reprogramming of Kaposi’s sarcoma associated herpes virus infected B-cells in hypoxia 20.87
Landscape of H3K4me3 in human CD19 cells 20.78
A novel lncRNA GAS1 promotes gastric carcinogenesis and acts as a modular scaffold of WDR5 and KAT2A complexes to specify the histone modification pattern [RNA-seq] 20.78
ChIP-seq and RNA-seq in BGC823 cells after downregulation of GAS1 expression 20.78
Activation of a SOX2-dependent transcriptional regulatory circuit drives glioblastoma. 20.68
A549 cells and MSR-A549 cells 20.61
mRNA expression profile of A549 cells and MSR-A549 cells with or without JQ1 treatment 20.61
DART-seq: an antibody-free method for global m6A detection 20.59
Sodium butyrate ameliorates aSyn-induced transcription deregulation and DNA damage 20.5
Viral determinants in H5N1 influenza A virus enable productive infection of HeLa cells 20.49
Wnt addiction of genetically defined cancers reversed by PORCN inhibition 20.34
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes 20.32
Integrative Genomic Analysis Reveals Widespread Enhancer Regulation by p53 in Response to DNA Damage 20.21
The NFkB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells 20.18
RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells. 20.11
High-throughput RNA sequencing on circular RNA profiles of human bladder cancer tissues and normal bladder tissues 20.07
Gene expression profiling of KSHV-infected periodontal ligament cells 19.95
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response 19.94
Steroid Receptor Coactivator-2 Regulated Transcriptome in Human Endometrial Stromal Cells 19.83
Genome-wide CRISPR-Cas9 screen identifies druggable synthetic lethality between LSD1 and MTORC1 in MLL-translocated AML 19.77
SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer (BRD4_JQ1_RNA-seq) 19.55
Organoids derived from directly reprogrammed human hepatocytes for modeling liver cancer initiation 19.46
Episomal HBV persistence within transcribed host nuclear chromatin compartments involves HBx 19.36
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (wtRNA-Seq) 19.24
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq] 19.11
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification 19.11
RNA-sequencing transcriptome profiling of normal human keratinocytes differentiation 18.93
Transcripotome analysis of different locations of hair follicles (bulb, bulge) in androgenetic alopecia 18.83
Transcriptome analysis of A549 cells expressing a SUMOylation-deficient TRIM28 mutant in the context of influenza A virus infection 18.83
RNA transcriptome analysis during HSV-1 infection 18.76
Aneuploidy triggers an immune response 18.72
Ribosome profiling of A549 cells depleted of RPLP1 and RPLP2 and infected with DENV. 18.53
Gene expression analysis of immortalized human liver progenitor-like cells in culture 18.41
Global analysis of ZNF217 chromatin occupancy in the breast cancer cell genome reveals an association with Eralpha 18.31
Effect of Influenza virus infection on lncRNA expression in A549 cells 18.26
The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling [RNA-seq] 18.08
The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling 18.08
RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 18.07
RNA-seq Profiles in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation 18.07
NRDE2 negatively regulates nuclear exosome functions 18.04
Transcriptomic Reprogramming of Prostate Cancer Cells Driven by Stroma-Derived SPINK1 17.69
RNA-Seq of cKIT+ sorted cells from 16-16.5 week old fetal testes and ovaries and RNA-Seq of TRA-1-60+ H1 hESCs 17.64
Systems-level analyses reveal a convergent pathway for progression of diffuse astrocytoma and potential role for resveratrol in delaying high-grade transformation 17.62
17.47
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 17.29
miR-191 regulates human cell proliferation and directly targets multiple oncogenes [seq] 17.29
Genome wide miR-191 target profile determined by RIP and gene expression profiling 17.29
Transcriptomic but not genomic variability confers phenotype of breast cancer stem cells 17.16
Polycomb- and Methylation-Independent Roles of EZH2 as a Transcription Activator 17.06
Polycomb- and Methylation-Independent Roles of EZH2 as a Transcription Activator [RNA-seq] 17.06
Transcriptomic analysis of healthy donor and Sickle Cell Disease (SCD) hematopoietic stem/progenitor cells 17.04
HDAC inhibition enhances the in vivo efficacy of MEK inhibitor therapy in uveal melanoma 16.68
Pancreatic cancer-derived exosomes induce apoptosis of T lymphocytes through the p38 MAPK signal transduction pathway 16.65
The landscape of alternative splicing in aggressive prostate cancers 16.57
SIRT6 regulates redox homeostasis in human mesenchymal stem cells by the transactivation of NRF2 16.55
A Brain Penetrant Mutant IDH1 Inhibitor Provides In Vivo Survival Benefit 16.51
Genome-wide expression analysis of human hTert immortalized fibroblasts after downregulation of MCM2 16.51
Lineage tracing of acute myeloid leukemia reveals the impact of hypomethylating agents on chemoresistance selection 16.47
Human Induced Pluripotent Stem Cells Recapitulate Breast Cancer Patients’ Predilection to Doxorubicin-Induced Cardiotoxicity 16.4
Adaptive resistance of melanoma cells to RAF inhibition via reversible induction of a slowly-dividing de-differentiated state 16.4
RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program 16.38
RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program (RNA-Seq) 16.38
AKT Inhibition Promotes Non-autonomous Cancer Cell Survival [RNA-Seq] 16.35
AKT Inhibition Promotes Non-autonomous Cancer Cell Survival 16.35
Adipocyte-derived lipids mediate melanoma progression via FATP proteins 16.29
Tyrosine Kinase Inhibitor Cardiotoxicity 16.1
High-Throughput Screening of Human Induced Pluripotent Stem Cell Cardiomyocytes Predicts Tyrosine Kinase Inhibitor Cardiotoxicity 16.1
Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2 16.01
Gene expression analysis of C4-2 cells treated with ACLY inhibitor and Enzalutamide 16.0
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 15.9
Expression profiling of etoposide-induced senescent cells 15.71
MEIS1 regulates hematopoiesis in hPSCs 15.71
Gene expression by high-throughput sequencing of T47D-MTVL human breast cancer cells upon H1.4 knock-down and multiple H1 variants 15.68
Large-scale expansion of human iPSC-derived skeletal muscle cells for disease modeling and cell-based therapeutic strategies 15.64
Gene expression profiling of human and murine in vitro muscle differentiation 15.63
Genome-wide transcriptional profiling of YAP target genes in human endothelial cells 15.57
Overexpression and knockdown experiment for circCSNK1G3 15.55
JQ1 +/- Vemurafenib in BRAF mutant melanoma (A375) 15.54
A novel P300 inhibitor reverses DUX4-mediated global histone H3 hyperacetylation, target gene expression and cell death 15.5
circRNA profile in hypopharyngeal cancer 15.49
mRNA differential expression analysis in a human ex vivo model of chronic wounds 15.36
Quantitative Analysis of p53 and/or TGFBR2 Knockdown Endothelial Transcriptomes after Irradiation 15.29
Transcriptome profiling identified a 3-lncRNA regulatory network in transthyretin against glucose induced hRECs dysfunction 15.28
Effect of FGF13 depletion on the H460 cell line 15.21
Transcriptomes analysis for the regulation of Z36 induced autophagy in HeLa cell death 15.21
Generation, transcriptome profiling, and functional validation of cone-enriched human retinal organoids 15.03
MYCi361 regulates MYC target genes 15.01
DAOY-NERT2 Notch/Hypoxia Transcriptome Analysis 14.9
TT-Seq captures the human transient transcriptome 14.88
NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements 14.87
The regulartory role of ZCCHC24 in splicing machinery 14.86
RNA seq_A375 gSMARCB1 + A549 etoposide, Aurora kinases inhibitors treated 14.83
Transcriptome-wide study of the response of human trabecular meshwork cells to the substrate stiffness increase 14.82
RNA-seq transcriptonal profiling in human primary adult erythroid progenitor cells (ProEs) after shRNA-mediated depletion of TFAM and PHB2 expression 14.81
Genome wide mapping of long noncoding (lnc) RNAs in hepatic stellate cells 14.77
Differentially expressed vascular development genes for iPSC-ECs from CDI 14.74
Reducing the structure bias of RNA-Seq reveals a large number of non-annotated non-coding RNA 14.74
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21 (RNA-Seq) 14.63
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21 14.63
RNA-seq of YB5 cells treated with Proscillaridin A 14.61
FOXA1 upregulation promotes enhancer and transcriptional reprogramming in endocrine-resistant breast cancer [RNA-seq] 14.55
FOXA1 upregulation promotes enhancer and transcriptional reprogramming in endocrine-resistant breast cancer 14.55
The Promyelocytic Leukemia Zinc Finger Dependent Transcriptome during Human Endometrial Stromal Cell Decidualization 14.49
Effect of CHKA knockdown on C4-2 cell transcriptome 14.48
RUNX1-ETO and RUNX1-EVI-1 differentially program the chromatin landscape in t(3;21) and t(8;21) AML but share global C/EBP-alpha dysfunction 14.41
RUNX1-ETO and RUNX1-EVI-1 differentially program the chromatin landscape in t(3;21) and t(8;21) AML but share global C/EBP-alpha dysfunction (RNA-Seq) 14.41
A comparison of gene expression between lesional and non-lesional derived keratinocytes of Hailey-Hailey disease patients. 14.28
Gene expression data from IMR90 control, IMR90 shRRM2 and shRRM2/shp16 14.24
Genome models integrating chromatin contacts and nuclear lamin-genome interactions reveal implications of laminopathy-causing lamin mutations on genome architecture 14.17
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression 14.02
Inhibition of TAZ contributes radiation-induced senescence and growth arrest in glioma cells 13.85
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) [RNA-seq] 13.78
Co-expression of CD163 and CD141 Identifies Human Circulating IL-10-Producing Dendritic Cells (DC-10) 13.78
Genome-wide DNA accessibility maps and differential gene expression using ChIP-seq, ATAC-seq and RNA-seq for the human secondary fibroblast cell line hiF-T and whole worms with and without knockdown of FACT complex 13.72
GDF6-induced BMP signaling reawakens a neural crest identity in melanoma to prevent cell death and differentiation 13.69
Differential gene expression of human melanoma cells [RNA-seq] 13.69
Biochemical fractionation of HEK293 nuclei and RNA-seq of chromatin-associated and soluble-nuclear RNA 13.62
Diverse AR-V7 cistromes in castration-resistant prostate cancer are governed by HoxB13 13.61
LINC00520 is Induced by Src, STAT3, and PI3K and Plays a Functional Role in Breast Cancer 13.61
Transcriptomic profiling of nasopharyngeal carcinoma (NPC) and normal control samples 13.61
Transcriptomic profiling of mRNA and miRNA from nasopharyngeal carcinoma (NPC) and normal control samples 13.61
Gene expression analysis of airway epithelial cells exposed to flagellin via RNA-seq and microarray 13.43
Gene expression analysis of airway epithelial cells exposed to flagellin via RNA-seq 13.43
MUC1-C represses the RASSF1A tumor suppressor and activated Kras signaling in human carcinoma cells 13.4
RNA sequencing for lncRNA, miRNA and mRNA expression analysis in human laryngeal cancer 13.39
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits 13.28
Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits [mRNA-Seq] 13.28
RNA-Seq analysis of primary human keratinocytes exposed to Cannabidiol 13.17
Identification of HOXB13 target genes responsive to BET inhibitors 13.15
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells 13.11
Biosynthesis of histone messenger RNA employs a specific 3' end endonuclease 13.07
Catalogue of differentially expressed long non-coding RNAs following activation of human and mouse innate immunity 13.06
RNA-seq of young and quiescent MRC-5 human fibroblasts 13.03
INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma 13.03
INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [RNA-seq] 13.03
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers (RNA-Seq) 12.99
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers 12.99
Patient-iPSC-derived kidney organoids show functional validation of a ciliopathic renal phenotype 12.94
Transcriptome profiling of hnRNP A2/B1 and A1 depleted cells 12.93
Whole-Transcriptome Profiling of Canine and Human in Vitro Models Exposed to a G-Quadruplex Binding Small Molecule 12.93
Contribution of SRF and Nkx2-5 to androgen-dependent gene expression in prostate cancer 12.91
Identification of global regulators of T-helper cell lineage specification (RNA-Seq) 12.89
Identification of global regulators of T-helper cell lineage specification 12.89
Gene expression analysis of dengue-infected cells 12.86
A non-catalytic function of carbonic anhydrase IX contributes to the glycolytic phenotype and pH regulation in human breast cancer cells 12.8
Transcriptional Modulation of Human Endogenous Retroviruses in Primary CD4+ T Cells Following Vorinostat Treatment 12.79
The impact of pro-inflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes 12.79
MYC dependent mRNA translation shapes gene expression and cell biology 12.71
Chromatin landscape of human visceral and subcutaneous adipocytes 12.69
Regulation of highly expressed hCINAP on translatome 12.68
Characterization and transplantation of enteric neural crest cells from human induced pluripotent stem cells 12.61
shRNA-mediated knockdown of ETV4 and MED25 in the prostate cell line PC3 reveals set of genes potentially coregulated by MED25 and ETV4 12.56
Genome-wide occupancy of FLAG-MED25 and ETV4 and expression profiling of shRNA-mediated knockdown of ETV4 and MED25 in the prostate cell line PC3 12.56
Functional Cardiac Fibroblasts Derived from Human Pluripotent Stem Cells via Second Heart Field Progenitors 12.51
Base-resolution mapping reveals distinct classes of N1-methyladenosine methylome in nuclear- and mitochondrial-encoded transcripts 12.5
Gene expression patterns define the hepatocyte-like cells derived by different strategies [RNA-seq] 12.49
Gene expression patterns define the hepatocyte-like cells derived by different strategies 12.49
Global transcriptome analysis of HAP1 cells 12.47
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells 12.46
Convergent exaptation of Alu and B/ID SINEs for Staufen-mediated mRNA decay 12.45
RNA-sequencing (RNA-seq) in BxPC-3 and S2-007 cell lines 12.43
Epigenetic Control of Skeletal Development by the Histone Methyltransferase Ezh2 12.4
RNA sequence analysis of stable versus reversible EMT events and the resultant metastases 12.37
Identification of PAX7-induced transcriptional changes and PAX7 genomic binding during skeletal myogenic differentiation of H9 embryonic stem cells 12.36
mRNA cap methyltransferase, RNMT-RAM, promotes RNA pol II transcription 12.33
Primary Human B-cell Temporal Response to CD40L Stimulation 12.33
Human iPSC derived glomeruli facilitate accurate modelling of podocytopathy 12.32
RNA-seq Transcriptome Analysis of AD169 and AD169-ΔUL26 infected MRC5 fibroblasts. 12.29
Involvement of Condensin in Cellular Senescence through Gene Regulation and Compartmental Reorganization 12.29
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 12.28
Proteostasis by STUB1/HSP70 complex controls sensitivity to androgen receptor targeted therapy in advanced prostate cancer (RNA-Seq) 12.24
Proteostasis by STUB1/HSP70 complex controls sensitivity to androgen receptor targeted therapy in advanced prostate cancer 12.24
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 12.23
Analysis of Th17 gene signature in the presence of CD28 costimulation in human CD4 naïve T cells 12.16
Presence of NAD+-capped RNA in human cells: function and removal by the DXO deNADing Protein 11.99
An aspartyl protease defines a novel pathway for export of Toxoplasma proteins into the host cell 11.92
LncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression 11.88
De novo reconstruction of human adipose reveals conserved lncRNAs as regulators of brown adipogenesis 11.87
RNA-seq melanoma 11.84
A compendium of promoter-centered long-range chromatin interactions in diverse human tissues and cell types 11.83
Human Hepatocytes with Drug Metabolic Function Induced from Fibroblasts by Lineage Reprogramming 11.73
A recessive form of hyper-IgE syndrome by disruption of ZNF341-dependent STAT3 transcription and activity 11.67
HuR controls apoptosis and activation response without effects on cytokine 3′ UTRs 11.66
Transcriptome sequencing of human coronary artery smooth muscle cell under treatment of nitrated fatty acid 11.65
TALENs-mediated gene disruption of FLT3 in leukemia cells: Using genome-editing approach for exploring the molecular basis of gene abnormality 11.64
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 11.64
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex 11.64
Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow 11.62
Transcriptome analysis of human airway epithelium infected by Human Bocavirus 1 11.61
Quantitative mass spectrometry-based proteomics reveals the dynamic protein landscape during initiation of human Th17 cell polarization 11.58
High throughput analysis of three human adipose cell lines PAZ6, SGBS and SW872 11.53
A code of mono-phosphorylation modulates the function of RB. 11.49
Multiple roles for Grainyheadlike transcription factors in the establishment and maintenance of human mucociliary airway epithelium 11.48
Long non-coding RNA SMILR regulates genes involved in cytokinesis in human vascular smooth muscle cell 11.48
SOX10 Single Transcription Factor Based Fast and Efficient Generation of Oligodendrocytes from Human Pluripotent Stem Cells 11.41
Short and long-term effects of CDK4/6 inhibition on early stage breast cancer 11.38
Cooperation of GRSF1 and the mitochondrial degradosome (hSuv3-PNPase complex) in degradation of mitochondrial RNA 11.32
An in vitro human liver model by iPSC-derived parenchymal and non-parenchymal cells 11.27
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress (Total RNA) 11.2
Genome-wide functional assessment of enhancer activities in the human genome 11.17
Decrease in EZH2 histone methyltransferase mediates the effects of fluid shear stress (FSS) in endothelial cells 11.1
RING-finger protein 6 amplification activates JAK/STAT3 pathway by modifying SHP-1 ubiquitylation and associates with poor outcome in colorectal cancer 11.07
Gene expression changes in HSV-1 infected HeLa cells with knockdown of B2M 11.06
Regulation of Lipids is Central to Replicative Senescence 11.0
Endothelial-AGO1-knockout (EC-AGO1-KO) mice and wild-type (WT) littermates 11.0
RNA Seq of HMVEC under hypoxia 11.0
Gene expression profiles of active and restricted R/G-HIV+ primary human fetal astrocytes 10.97
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 10.86
Alarmin S100A11 initiates a chemokine response to the human pathogen Toxoplasma gondii 10.86
Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells 10.8
Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation 10.8
Epigenetic alterations affecting transcription factors and signaling pathways in stromal cells of endometriosis: Expression data (RNA-seq) 10.7
Epigenetic alterations affecting transcription factors and signaling pathways in stromal cells of endometriosis 10.7
Neurofibromin is an Estrogen Receptor alpha Transcriptional Co-repressor in Breast cancer 10.57
The MLL-AF9 and MLL-AF4 oncofusion proteins bind a distinct enhancer repertoire and target the RUNX1 program in MLLr AML 10.56
shRNA knockdown of YAP1 in HCC364 cells, various drug conditions 10.55
RNA-seq analysis of differentiating human erythroblasts 10.52
Indoxyl sulfate stimulates angiogenesis by regulating reactive oxygen species production via CYP1B1 10.48
Inhibition of the Aryl Hydrocarbon Receptor - Polyamine Biosynthesis Axis Suppresses Multiple Myeloma and prostate cancer progression 10.36
RNA-seq data of adipocytes co-cocultured with OVCAR5 in Boyden chamber (4d) 10.28
Next Generation Sequencing (RNA-Sequencing) for the analysis of RUNX3 targets in H460, H460-ERT2-RUNX3 WT and H460-ERT2-RUNX3 MT(K94/171R mutation) 10.22
Allelic expression mapping across cell lineages reveal repressor disruption among disease SNPs 10.11
Human co-transcriptional splicing kinetics and coordination revealed by direct nascent RNA sequencing 10.06
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 9.93
Downregulation of DDX5/DDX17 and REST 9.92
mRNA sequencing identifies differential gene expresssion profiles between ASCC3 knock-down cells and control cells 9.92
High-throughput RNA sequencing on circular RNA profiles of human triple-negative breast cancer and adjacent normal tissues 9.92
Transcriptomic profile of T cell acute lymphoblastic leukemia (T-ALL) cell from patients in CHCQMU 9.81
RNA-seq expression data from FL-HSPCs after HOXA7 knockdown 9.78
Pharmacological Induction of a Progenitor State for the Efficient Expansion of Primary Human Hepatocytes 9.77
PSEN1ΔE9, APPswe and APOE4 confer disparate phenotypes in human iPSC-derived microglia 9.76
Characterization of Type I Interferon pathway during Hepatic Differentiation of Human Pluripotent Stem Cells and hepatitis C virus infection 9.74
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 9.71
Identification of differentially expressed genes between senescence and senescence bypass cells 9.7
RNAseq of quiescent (Q) and stress induced premature senescent (SIPS) fibroblasts treated with plant extract (1201) from Solidago vigaurea subspecies alpestris 9.63
Tumor hypoxia causes DNA hypermethylation by reducing TET activity 9.55
Tumor hypoxia causes DNA hypermethylation by reducing TET activity (RNA-Seq) 9.55
Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors 9.45
Role of XRN2 ribonucleolytic activity in RNA metabolism 9.43
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 9.4
Next Generation Sequencing Analysis of Colorectal Cancer Tissue Transcriptomes 9.38
RNA-seq data from human lymphoma cell lines 9.36
ChIP-seq and RNA-seq from human lymphoma cell lines 9.36
RNA-Guided Human Gene Activation by Cas9/CRISPR-Based Engineered Transcription Factors 9.2
MLL-AF4 binds directly to a BCL-2 specific enhancer and impacts H3K27 acetylation 9.18
RNA sequencing of lesional and nonlesional skin from patients with atopic dermatitis 9.17
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 9.12
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 9.12
Differential susceptibility of human pleural and peritoneal mesothelial cells to asbestos exposure 8.9
RNA-sequencing 8.87
Transcriptional regulation in pluripotent stem cells by Methyl CpG binding protein 2 (MeCP2) 8.67
Epidermal growth factor activates β-catenin via integrin-linked kinase to control proliferation of mesenchymal stromal cells. 8.51
Mechanosensitive ion channel regulates tissue stiffening to promote glioma aggression 8.42
Differential responses of human fetal brain neural stem cells to Zika virus infection 8.4
Integrin signaling regulates YAP/TAZ to control skin homeostasis 8.38
Modeling Familial Cancer with iPSC Approaches 8.33
Tricyclic Antidepressants Induce Inactivation of Hepatic Stellate Cell (HSC) Myofibroblasts 8.28
CRISPR-Cas9 based screen for p53-bound enhancers that function in oncogene-induced senescence 8.28
Splicing and gene expression changes in human mammary epithelial MCF-10A cells expressing SR or SR-like proteins 8.27
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG functional reactivation [human cells RNA-seq] 8.27
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG 8.27
Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription 8.26
Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription [RNA-Seq] 8.26
Effect of from Human Umbilical Vein Endothelial Cells 8.15
Differential gene expression analysis between proliferating and quiescent human dermal fibroblasts 8.13
Proximity-CLIP provides a snapshot of occupied cis-acting elements on RNA in different subcellular compartments on a transcriptome-wide scale 8.0
RNA-dependent RNA polymerase sequence specificities of capsnatching viruses are tailored to aid viral replication 7.98
RNA-seq of MLLT3-overexpressing cultued HSPC, compared to non-overexpressing and uncutured FL-HSPC [RNAseq_MLLT3_OE] 7.97
Mllt3 Governs Self-Renewal And Engraftment Of Human Hematopoietic Stem Cells 7.97
DDX54 regulates transcriptome dynamics during DNA damage response [RNA-seq2] 7.95
RNAi profiling of primary human AML cells identifies ROCK1 as a therapeutic target and nominates Fasudil as an anti-leukemic drug. 7.93
Agonistic targeting of TLR1/TLR2 induces p38 MAPK-dependent apoptosis and NfkB-dependent differentiation of AML cells 7.89
DHX36 is the missing link to understand RNA G-quadruplex structures, mRNA stability, and translation [RNA-seq] 7.77
Transcriptome Analysis and Functional Identification of Adipose-Derived Mesenchymal Stem Cells in Secondary Lymphedema 7.77
Pharmacological Induction of a Progenitor State for the Efficient Expansion of Primary Human Hepatocytes 7.68
Targeting the androgen receptor N-terminus via the cochaperone Bag-1L [RNA-seq C-terminal mutant] 7.59
A map of gene expression in neutrophil-like cell lines 7.55
A cytoplasmic COMPASS is necessary for cell survival and triple-negative breast cancer pathogenesis by regulating metabolism 7.54
Integration of genome-wide DNA methylome and transcriptome of human intestinal fibroblasts reveals novel candidate gene signatures in Crohn’s disease-associated fibrosis 7.53
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction [III] 7.53
Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 7.51
Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 [RNA-seq] 7.51
JAG1 Mediated Notch Signaling Regulates Secretory Cell Differentiation of the Human Airway Epithelium 7.46
SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer 7.46
Genes significantly down or Up-regulated upon RNF219 knockdown. [RNA-Seq] 7.44
Aneuploidy-induced cellular stresses limit autophagic degradation. 7.35
Transcriptomic alterations in fibroblasts from Parkinson's disease patients carrying Parkin mutations 7.34
Differential expression analysis of RNA-seq data from melanocytes driven by tumor cell-derived exosomes 7.34
Selective expression of long non-coding RNAs in a breast cancer cell progression model 7.28
TAF1 is critical for AE driven leukemogenesis [RNA-seq] 7.23
TAF1 is critical for AE driven leukemogenesis 7.23
TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding 7.21
Epithelial-mesenchymal transition markers screenedina cell-based model and validated in lung adenocarcinoma 7.2
ATXN7L3 And ENY2 Coordinate Activity Of Multiple H2B Deubiquitinases Important For Cellular Proliferation And Tumor Growth [RNA-Seq] 7.12
ATXN7L3 And ENY2 Coordinate Activity Of Multiple H2B Deubiquitinases Important For Cellular Proliferation And Tumor Growth 7.12
Slit2 modifies VEGF-induced angiogenic responses in rabbit skeletal muscle by inducing capillary sprouting and decreasing vascular permeability via reduced eNOS activity 7.03
Identification of mesothelial-to-mesenchymal gene signature in ascitic fluid-isolated mesothelial cells through RNA-sequencing 7.03
RNA-sequencing with micro-dissected boundary organoid into anterior, posterior, and boundary regions 6.95
Runx1 stabilizes the mammary epithelial cell phenotype and prevents epithelial to mesenchymal transition 6.94
Modulation of mitochondrial DNA copy number to induce hepatocytic differentiation of human Amniotic Epithelial cells 6.89
Antiviral innate immunity of hepatitis C virus-infected stem cell-derived hepatocytes 6.88
Transcriptome wide analysis of translation efficiency in MCF7 cells using polysome profiling with and without eIF4A inhibition by hippuristanol treatment 6.87
Cell cycle dynamics of human pluripotent stem cells primed for differentiation 6.8
TFAP2C signalling in human fibroblasts 6.71
Human cells contain natural double-stranded RNAs with potential regulatory capacity 6.66
Endogenous interaction profiling identifies DDX5 as an oncogenic coactivator of transcription factor Fra-1 6.66
Endogenous interaction profiling identifies DDX5 as an oncogenic coactivator of transcription factor Fra-1 [RNA-seq] 6.66
Transcriptome-analysis of patient-derived normal and ulcerative colitis intestinal epithelial organoids 6.56
Effect of BB608 on Gene Expression in HNSCC Cell Line 6.54
Transcriptomic analysis of primary human T cells and murine RAW 264.7 macrophages 3D cultured in different collagen densities 6.48
Effect of CRISPR-Cas9 mediated knock-out of integrin alpha2 on the transcriptome of DU145 prostate cancer cell grown as a spheroid culture 6.48
Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response 6.42
ChIPseq and RNAseq analysis of T47D cells with/without silencing TRPS1/CHD4 6.31
Combinatorial Reprogramming of Estrogen Signaling by the Nuclear Receptor Family 3C 6.2
Distinct structural classes of activating FOXA1 alterations in prostate cancer progression 6.02
Distinct structural classes of activating FOXA1 alterations in prostate cancer progression [RNA-Seq] 6.02
miR-93 Targets in Human Endothelial Cells 6.0
Transcriptome analysis-identified long noncoding RNA CRNDE in maintaining endothelial cell proliferation, migration, and tube formation 5.98
4sU-seq of HFF exposed to salt and heat stress 5.94
Transcriptomics analysis of enteroendocrine cells following vertical sleeve gastrectomy 5.92
Transcriptomics analysis of human jejunal enteroendocrine cells after vertical sleeve gastrectomy 5.92
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation 5.89
Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq) 5.89
Role of SUMOylation in differential ERα transcriptional repression by SERMs and pure antiestrogens in breast cancer cells 5.87
Study of dynamic transcriptome profiling in DNA damage-induced cellular senescence and transient cell-cycle arrest 5.82
Mutant KRAS/BRAF Reprograms the Enhancer Landscape via GATA1 to Drive Chemoresistance 5.79
Tumor- and cytokine-primed human natural killer cells exhibit distinct phenotypic and transcriptional signatures 5.75
Tumor- and cytokine-primed human natural killer cells exhibit distinct phenotypic and transcriptional signatures [RNA-seq] 5.75
RNA-seq of human foreskin fibroblast cells lacking RB, p130, and p107 treated with doxorubicin. 5.69
Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation 5.66
CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair 5.63
Specific labeling of stem cell activity in human colorectal organoids using an ASCL2-responsive minigene 5.56
Risk SNPs mediated promoter-enhancer switching promotes prostate cancer progression through lncRNA PCAT19 (RNA-seq data sets) 5.54
Risk SNPs mediated promoter-enhancer switching promotes prostate cancer progression through lncRNA PCAT19 5.54
Single Cell Sequencing Reveals Gene Expression Signatures Associated with Bone Marrow Stromal Cell Subpopulations and Time in Culture [NGS_bulk cell RNA-seq] 5.53
siRNA-mediated silencing of ORAI3 in MDA-MB-468 breast cancer cells exposed to hypoxia 5.45
Lipid catabolism inhibition sensitizes prostate cancer cells to antiandrogen blockade 5.39
Effect of Polybrominated diphenyl ethers (PBDEs) on gene expression of MCF7 cells 5.31
Comparison of small cell lung cancer PDX model FHSC04 for response to LSD1 inhibitor RG6016/ORY1001 5.17
Effects of transcription factor CEBPA knockdown on vitamin D target gene regulation in THP-1 cells 5.09
The pioneer factor CEBPA modulates vitamin D signaling 5.09
Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype 5.04
Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype [RNA-seq] 5.04
CHD7 is Suppressed in the Perinecrotic/Ischemic Microenvironment and is a Novel Regulator of Angiogenesis 4.87
Integrative classification of human coding and non-coding genes based on RNA metabolism profiles 4.86
The Chromatin-Looping Factor ZNF143 Engages at Looping Promoters to Favor the Estrogen Response in Breast Cancer (RNA-seq) 4.75
The Chromatin-Looping Factor ZNF143 Engages at Looping Promoters to Favor the Estrogen Response in Breast Cancer 4.75
SMAD2/3 are redirected to novel sites in MCF10A MII after prolonged TGFβ stimulation 4.74
JUNB is a critical AP1 component for SMAD2/3 binding after TGFβ stimulation [RNA-seq] 4.74
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 4.72
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma non-targeting shRNA negative control (SHC002V) with puromycin selection RNAseq 4.71
Immune Checkpoint Regulation of Pulmonary Fibrosis [bulk RNA-seq] 4.42
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling 4.31
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling (RNA-seq) 4.31
The Hippo pathway kinase LATS1 scaffolds Beclin1 in autophagy regulation in hepatocellular carcinoma 4.19
Genome-wide Dose-dependent Inhibition of Histone Deacetylases Reveals Their Roles in Enhancer Remodeling and Suppression of Oncogenic Super-enhancers 4.15
Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events 4.12
RNA-Seq analysis of prostate cancer cell line LNCaP treated with vehicle, androgen, androgen and IMTPPE, androgen and JJ-(+)-450, androgen and JJ-(-)450, androgen and enzalutamide 4.07
Global transcriptome analysis of WT versus HEB-/- hESCs 4.01
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity 3.91
Genome-wide RNA deep sequencing of CAL-101 or AKTi primed human T cells in comparison to traditionally expanded T cells 3.8
Transcriptional profile of human STAT1-/- fibroblasts expressing LY6E or empty control vector 3.71
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 3.62
Cooperation of Nutlin-3a and a Wip1 inhibitor to induce p53 activity 3.33
Be1 and Be2 B cells are transcriptionally distinct 3.33
Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course 3.33
Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains 3.33
Joint-specific DNA transcriptome signatures in rheumatoid arthritis [RNA-seq] 3.26
Gene Expression Analysis of HUVEC Seeded rBEL Contructs at Low and High Phases of Glucose Consumption 3.16
PANCR, the PITX2 adjacent noncoding RNA, is specifically expressed in human left atria and regulates PITX2c expression 3.13
Transcriptomic Analysis Of circRNAs/miRNAs/mRNAs upon Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection 3.09
RNAseq of human monocyte cell line (U937-Cas9) WT or IRF2KO 3.09
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 2.94
Impaired DNA damage metabolism promotes autoimmunity in TREX1 deficiency  2.91
System-wide profiling of RNA-binding proteins uncovers key regulators of virus infection 2.85
Metabolism as an early predictor of DPSCs aging 2.76
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle 2.75
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle [RNA-seq] 2.75
Profiling and bioinformatics analyses reveal differential expression of circular RNA in tongue cancer revealed by high-throughput sequencing 2.73
Enhancer activation during EGF response 2.73
YTHDF1 Amplifies Wnt/β-Catenin Signaling to Promote Intestinal Stemness 2.63
HIV Reprograms Human Airway Basal Stem/Progenitor Cells to Acquire a Tissue Destructive Phenotype 2.63
mRNA expression in human DAOY cells 2.62
RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining 2.56
TOP2B disturbed the quality of human oocytes with advanced maternal age 2.49
Immunophenotyping and Transcriptomic Outcomes in PDX-Derived TNBC Tissue 2.49
Effect of BCL11B knockdown on transcriptome of human T-cell precursors 2.36
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 2.22
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 2.22
KDM1A confers invasive and metastatic attributes in lung adenocarcinoma by modulating a non-canonical Integrin ß3-KRAS signaling pathway 2.04
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [SLAM-Seq] 1.99
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 1.98
Comparative analysis of mesenchymal stem cells derived from amniotic membrane, umbilical cord and chorionic plate under serum-free condition 1.94
β-Caryophyllene Enhances the Transcriptional Upregulation of SREBP-dependent Lipid Biosynthesis in Breast Cancer Cells 1.92
Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre-B ALL [RNA-seq] 1.83
Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre-B ALL 1.83
Exogenous rescue of KLHL9 in SF210 cell line 1.74
Genome-wide hsa-miR-503, hsa-miR-103, and hsa-miR-494 target profiles 1.68
hsa-miR-503, hsa-miR-103, and hsa-miR-494 genome wide target profiles [RNA-Seq and RIP-Seq] 1.68
MicroRNA-125a-5p overexpression in human macrophages 1.5
Gene expression profile of CRC-derived HILEC 1.39
A High-Throughput Screen Identifies DYRK inhibitor ID-8 that Stimulates Human Kidney Tubular Proliferation 1.37
Hyperactive mTOR and MNK1 phosphorylation of eIF4E confer tamoxifen resistance and estrogen independence through selective mRNA translation reprogramming 1.34
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling 1.31
Transcriptome profiling of de-differentiated chondrocytes over-expressing miR-138 or miR-181ab1 during osteogenic induction 1.27
Identification of a core p53 transcriptional program with highly fractionated tumor suppressive activity 1.22
GRO-seq from HCT116, MCF7 and SJSA cell lines treated with DMSO and Nutlin 1.22
Genome-wide expression analysis of young, senescent and p38MAPK-inhibitited senescent human fibroblasts. 1.11
Screening in Human Cardiac Organoids Identifies a Requirement for the Mevalonate Pathway in Cardiomyocyte Proliferation 1.02
Transcriptome profiling of A2M treated A549 Cell Line Samples 1.0
RNA-seq characterization of downstream effects of upregulating SMN2 via down-regulating PRC2 or blocking the PRC2:SMN-AS1 interaction with a mixmer oligonucleotide 0.93
Smoking Dysregulates the Human Airway Basal Cell Transcriptome at COPD-linked Risk Locus 19q13.2 0.91
Role of OSGIN1 in Mediating Smoking-induced Autophagy in the Human Airway Epithelium 0.91
Role of OSGIN1 in Mediating Smoking-induced Autophagy in the Human Airway Epithelium [RNA-Seq] 0.91
UPF1/SMG7-dependent MicroRNA-mediated Gene Regulation 0.87
6mer seed toxicity in viral microRNAs 0.82
Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity 0.8
Rnase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs 0.79
Proliferation-correlated expression 0.68
Mesothelioma xenografts in nude mice: PBS treated versus pirfenidone treated 0.57
Vammin induces a highly efficient angiogenic response through VEGFR-2/NRP-1 and bypasses the regulatory function of VEGFR-1 0.44
Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes 0.39
Wide-scale analysis of alternative polyadenylation (APA) associated with proliferation and transformation using 3'-Seq 0.35
Concomitant BCORL1 and BRAF mutations in vemurafenib-resistant melanoma cells 0.34
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) in proliferation, quiescence, senescence and transformed states. 0.29
Extracellular matrix (ECM) stiffness and collagen-1 (col-1) responsive genes in 3D cultured mammary epithelial cells 0.26
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.14
Random mono-allelic expression in MECP2-mutated cells 0.12
Targets mediated microRNA arm-imbalance promotes gastric cancer progression [lncRNA] 0.08
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_Stability] 0.07
Determining mRNA half-lives on a transcriptome-wide scale 0.06
Glucose inhibits cardiac maturation through nucleotide biosynthesis 0.01


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