|
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) |
39.41 |
|
To investigate the decay constants (half-lives) of transcript isoforms generated by alternative polyadenylation in proliferating and quiescent cells |
24.11 |
|
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA |
22.51 |
|
Changes in RNA expression in human oral cavity carcinoma cells as a result of LDB1 reduction |
18.83 |
|
Transcriptome analysis of human immortilized astrocytes reprogrammed into dopaminergic neurons |
17.38 |
|
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct |
17.05 |
|
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response |
15.57 |
|
Systematic discovery of endogenous human ribonucleoprotein complexes |
14.84 |
|
Characterizing smoking-induced transcriptional heterogeneity in the human bronchial epithelium at single-cell resolution |
14.77 |
|
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection |
14.67 |
|
HNF1A deficiency impairs β-cell fate, granule maturation and function |
14.45 |
|
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells |
13.72 |
|
Global analysis of enhancer targets: Mosaic-seq |
13.52 |
|
Single-nucleotide-resolution mapping of HBV promoters using CAGE |
13.31 |
|
Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods |
13.09 |
|
The Developmental Heterogeneity of Human Natural Killer Cells Defined by Single-cell Transcriptome |
12.5 |
|
An atlas of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2 |
12.42 |
|
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells |
12.28 |
|
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes |
11.14 |
|
A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance |
11.09 |
|
Comprehensive comparative analysis of 5’ end RNA sequencing methods |
11.0 |
|
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] |
10.5 |
|
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer |
10.5 |
|
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 |
10.13 |
|
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq |
9.85 |
|
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 |
9.79 |
|
Generating Patterned Kidney Organoids for Studying Development and Diseases |
9.78 |
|
Regulatory network controlling tumor-promoting inflammation in human cancers |
9.48 |
|
Regulatory network controlling tumor-promoting inflammation in human cancers [RNA-seq] |
9.48 |
|
Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease |
9.15 |
|
Human CD4+CD103+ cutaneous resident memory T cells are found in the circulation of healthy subjects |
9.13 |
|
DART-seq: an antibody-free method for global m6A detection |
9.1 |
|
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation |
8.97 |
|
Low carbohydrate diet study for non-alcoholic fatty liver disease patients |
8.81 |
|
Polysome-associated mRNA profiling of cancer cells in response to CXCL12 and IGF1 |
8.63 |
|
CROP-Seq in Primary Human T Cells |
8.6 |
|
Identification of transcription start sites for human A549 cell line using ReCappable-seq |
8.6 |
|
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase |
8.48 |
|
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_RNA-seq] |
8.47 |
|
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration |
8.45 |
|
Peptidomimetic blockade of MYB in acute myeloid leukemia [RNA-seq] |
7.97 |
|
Peptidomimetic blockade of MYB in acute myeloid leukemia |
7.97 |
|
Impact of ETV7 activity on interferon-stimulated gene expression in 293T cells treated with interferon alpha |
7.96 |
|
ETV7 and interferon response |
7.96 |
|
WNK1 kinase and the termination factor PCF11 connect nuclear mRNA export with transcription |
7.94 |
|
mRNA gene expression profiling in a human AML cell line treated with small molecule inhibitors that impact different RNA polymerase transcription complexes, or their combination, in comparison to a global DNA-damaging anthracycline compound |
7.82 |
|
Transcriptional profiling of microglia; current state of the art and future perspectives |
7.69 |
|
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation |
7.66 |
|
ARID1A regulates condensin II distribution and chromosomal partition |
7.56 |
|
ARID1A regulates condensin II distribution and chromosomal partition [RNA-seq] |
7.56 |
|
Epigenetic Lanscape and BRD4 Transcriptional Dependency of PAX3-FOXO1 Driven Rhabdomyosarcoma |
7.48 |
|
PAX3-FOXO1 requires BRD4 to drive oncogene addiction in RMS cells [RNA-seq] |
7.48 |
|
RNAseq of HEK293 cells after Chtop knockdown |
7.44 |
|
Co-transcriptional loading of RNA export factors shapes the human transcriptome |
7.44 |
|
Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training |
7.05 |
|
Regulation of protein translation during mitosis |
7.0 |
|
Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD) |
6.85 |
|
TT-Seq captures the human transient transcriptome |
6.83 |
|
EWSR1 influences alternative splicing through direct and indirect mechanisms |
6.79 |
|
Transcriptomic but not genomic variability confers phenotype of breast cancer stem cells |
6.77 |
|
MOF acetyl transferase regulates transcription and respiration in mitochondria |
6.68 |
|
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells |
6.67 |
|
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells |
6.63 |
|
Splicing towards noncoding isoforms in colorectal carcinoma is associated with tumor hypoxia and the DNA damage response |
6.51 |
|
Trans-differentiation of human adult peripheral blood T cells into neurons |
6.23 |
|
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing |
6.13 |
|
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) |
6.09 |
|
Effect on small molecule RBPJ inhibitor (RIN1) on gene expression in Jurkat cells compared to gamma secretase inhibition and siRNA knockdown of RBPJ |
6.07 |
|
4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells |
6.05 |
|
Viral shRNA Knockdown of INS Promotor Activity in EndoC-βH1 Cells |
6.05 |
|
XBP1s Activation Globally Remodels N-Glycan Structure Distribution Patterns |
6.03 |
|
Lysine benzoylation is a novel histone mark |
5.91 |
|
Lysine benzoylation is a novel histone mark [RNA-seq] |
5.91 |
|
Mediator kinase inhibition further activates super-enhancer-associated genes in AML |
5.9 |
|
Effect in HCT116 cells of 3hr cortistatin A treatment on gene expression. |
5.9 |
|
Identification of renal resident macrophages across species |
5.89 |
|
Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing [RNA-Seq] |
5.88 |
|
Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing |
5.88 |
|
Sirt6 Oncogene Mediates PI3K/Akt Signaling Activation in Diffuse Large B-Cell Lymphoma |
5.88 |
|
LSD1 pharmacological inhibition in SET-2 containing wild type and mutant LSD1 |
5.83 |
|
LSD1 pharmacological inhibition in SET-2 containing wild type and mutant LSD1 [RNA-Seq] |
5.83 |
|
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development |
5.82 |
|
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression |
5.77 |
|
Next Generation Sequencing of control (Untreated), PAN injured and Adriamycin injured human podocytes |
5.76 |
|
Effect of 48h treatment with 100nM GSK2879552 on T-ALL cell lines HSB2 and RPMI8402 |
5.75 |
|
Transcriptomic analysis of human tonsillar TFH subsets |
5.6 |
|
Impact of dieldrin on transcription in Jurkat T cells |
5.54 |
|
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses |
5.54 |
|
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] |
5.45 |
|
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer |
5.35 |
|
Effect of ILF3 on translation during homeostasis and the antiviral response |
5.32 |
|
transcriptomic profiling of HEK293 cells upon individual knockdown of the splicing factors RBM17, U2SURP or CHERP |
5.32 |
|
Expression data for KDM1B knockdown in Glioma-Initiating Cells (GICs) |
5.06 |
|
The X-linked DDX3X RNA helicase dictates translation re-programming and metastasis in melanoma |
5.04 |
|
The comparison of high-throughput single-cell RNA-seq methods |
4.87 |
|
RNA sequencing of matched nephrectomy samples [RNA-seq] |
4.83 |
|
Genome-wide maps of H3K36me3 in ccRCC and RNA-seq of matched nephrectomy samples |
4.83 |
|
Genome wide mapping of polyadenylation sites in proliferating and contact-inhibited cells and cells with knockdown of cleavage and polyadenylation factors |
4.79 |
|
In vitro differentiation of human embryonic stem cells into ovarian follicle-like cells |
4.75 |
|
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (human 3' mRNA-seq) |
4.73 |
|
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing |
4.73 |
|
CRISPR adenine and cytosine base editors with reduced RNA off-target activities |
4.73 |
|
CRISPR adenine and cytosine base editors with reduced RNA off-target activities [CBE] |
4.73 |
|
Complete deconvolution of cellular mixtures based on linearity of transcriptional signatures |
4.7 |
|
RNA sequencing based comparative analysis of human hepatic progenitor cells and their niche from alcoholic steatohepatitis livers |
4.68 |
|
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer |
4.68 |
|
Single-cell transcription profiling in KS1 patient iPSCs and NPCs |
4.68 |
|
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential |
4.67 |
|
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells |
4.61 |
|
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (RNA-seq dataset) |
4.58 |
|
Large-scale profiling of intracellular signalling pathway activation reveals major distinctions between airway smooth muscle cells of asthmatics and non-asthmatics. |
4.48 |
|
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene |
4.48 |
|
Single-cell analysis of human kidney organoids |
4.47 |
|
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia [RNA-seq] |
4.42 |
|
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia |
4.42 |
|
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] |
4.35 |
|
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] |
4.34 |
|
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 |
4.26 |
|
BRG1 governs Glucocorticoid Receptor interactions with chromatin and pioneer factors across the genome |
4.26 |
|
Impact of HypERrlnc Knockdown on the human pericyte transcriptome |
4.25 |
|
Genome-wide chromatin analysis of Ewing sarcoma |
4.22 |
|
Genome-wide chromatin analysis of Ewing sarcoma (RNA-seq) |
4.22 |
|
β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer |
4.22 |
|
A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development [BM low-input mRNA-seq] |
4.12 |
|
Identification of a dynamic core transcriptional network in t(8;21) AML regulating differentiation block and self-renewal [RNA-Seq] |
4.1 |
|
Identification of a dynamic core transcriptional network in t(8;21) AML regulating differentiation block and self-renewal |
4.1 |
|
Transcriptome sequencing of K-562 cells |
4.09 |
|
ATF4 inhibition by p62 represses stromal metabolic reprogramming and tumorigenesis II |
4.07 |
|
Whole Transcriptome RNASeq Data for Cell-Sorted Antibody Secreting Cells (ASC) |
4.02 |
|
TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding |
3.91 |
|
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development |
3.9 |
|
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression |
3.85 |
|
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 |
3.81 |
|
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] |
3.81 |
|
Total RNA-seq in ALL-SIL upon TLX1 knockdown |
3.79 |
|
HEK293 Heat-shock experiment |
3.79 |
|
RNA sequencing of 13 T-cell acute lymphoblastic leukemia patients (5 TCRAD-MYC translocated T-ALL_8TAL1-LMO2 T-ALL) |
3.78 |
|
The translation termination factor GSPT1 is a phenotypically relevant off-target of heterobifunctional phthalimide degraders |
3.78 |
|
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes |
3.73 |
|
Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells |
3.71 |
|
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions |
3.69 |
|
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) |
3.68 |
|
mRNA expression profiling in MDA-MB-231 (LM1) cells with a tet-incible MBD2 or p66α knock down, or treated with MBD2-targeting small molecule ABA or APC |
3.68 |
|
SETDB2 links E2A-PBX1 to cell cycle dysregulation in acute leukemia through CDKN2C repression [sequencing] |
3.68 |
|
Transcriptomic profiling of HeLa cells infected with Salmonella Typhimurium |
3.66 |
|
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression |
3.66 |
|
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) |
3.66 |
|
SMN2 splicing modifiers improve motor function and longevity in mice with spinal muscular atrophy |
3.64 |
|
Gene expression in control and DOCK8 CRISPR KHYG1 NK cells |
3.61 |
|
Regulation of mRNA half-life by an inhibitor of human decapping enzyme Dcp2 following transcription shutoff in HEK293T cells |
3.61 |
|
Global gene expression profiling from LeuCAG3'tsRNA depleted- HeLa and HCT-116 cell lines through 50 base pair paired-end RNA-seq |
3.61 |
|
Poly(ADP-ribosyl)ation dependent changes in CTCF-chromatin binding and gene expression in breast cells |
3.61 |
|
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. |
3.58 |
|
Transcriptome analysis of U87 cells upon LINC00152 knockdown |
3.58 |
|
Identification of mRNAs with reduced ribosomal loading upon knock-down of translation factor DAP5 from hESCs. |
3.56 |
|
Transcriptome-wide identification of splicing defects upon XAB2 knockdown |
3.55 |
|
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates |
3.54 |
|
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection |
3.54 |
|
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection (RNA-sequencing) |
3.54 |
|
ABCB5 is activated by MITF and b-catenin and is associated with melanoma differentiation |
3.52 |
|
Hierarchy of mono- and bi-allelic TP53 alterations in Multiple Myeloma cell fitness |
3.52 |
|
Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration |
3.46 |
|
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies |
3.43 |
|
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies [RNA-Seq] |
3.43 |
|
Hyperactive mTOR and MNK1 phosphorylation of eIF4E confer tamoxifen resistance and estrogen independence through selective mRNA translation reprogramming |
3.43 |
|
Effect of disulfiram treatment on pediatric high grade glioma |
3.43 |
|
Distinct regulation of alternative polyadenylation and gene expression by nuclear poly(A) polymerases |
3.42 |
|
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma shRNA Clone TRCN0000005418 targeting RIOK3 with puromycin selection RNAseq |
3.41 |
|
Detection of internal N7-methylguanosine (m7G) RNA modifications by mutational profiling sequencing |
3.4 |
|
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. |
3.4 |
|
scRNASeq analysis of cycling cardiomyocytes |
3.38 |
|
Transciptome profiling of NoDice and RNaseIII null cells prior to and after polyIC treatment |
3.36 |
|
Inhibition of SF3B1 by molecules targeting the spliceosome in Rh18 cells |
3.3 |
|
Accurate annotation of human protein-coding small open reading frames |
3.3 |
|
Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of BET inhibitor JQ1 |
3.29 |
|
Transcriptome splicing analysis in K562 cells expressing rare and private spliceosomal mutations |
3.29 |
|
Ribo_seq (aka ribosome profiling) analysis of control and Myc-induced U2OS cells |
3.28 |
|
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] |
3.27 |
|
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells |
3.27 |
|
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability |
3.26 |
|
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability [RNA-seq] |
3.26 |
|
Transriptional profiling upon heat shock and recovery in cells deficient for FBXW7 and their wild type counterpart. |
3.26 |
|
FBXW7 modulates stress response by post-translational modification of HSF1 |
3.26 |
|
Human serum and heparin-free platelet lysate as appropriate xeno-free alternatives for production of human MuStem cell batches |
3.25 |
|
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes |
3.24 |
|
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos |
3.19 |
|
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (TLR perturbation Bulk RNA-Seq) |
3.19 |
|
The stress granule transcriptome reveals principles of mRNA accumulation in stress granules. |
3.19 |
|
Transcription-dependent control of stem cell self-renewal and differentiation by the splicing factor U2AF1 |
3.17 |
|
Translating transcriptome of cancer cells in situ in mesenchymal-rich tumor microenvironment |
3.17 |
|
RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs |
3.16 |
|
Cooperation of dominant oncogenes with regulatory variants shapes clinical outcomes in pediatric cancer |
3.15 |
|
RNA-seq of three Ewing sarcoma cell lines (A673, SK-N-MC, RDES), transfected with either siControl or siMYBL2. |
3.15 |
|
Dual inhibition of HDMX and HDM2 as a Therapeutic Strategy in Leukemia |
3.14 |
|
Characterization of human CDK12 and CDK13 in the regulation of RNA processing |
3.14 |
|
Major hnRNP proteins act as general TDP-43 functional modifiers both in Drosophila and human neuronal cells. |
3.13 |
|
RNA sequencing of mechanically strained NHEKs and control NHEKs |
3.13 |
|
Loss of histone macroH2A1 in hepatocellular carcinoma cells promotes paracrine-mediated chemoresistance and CD4+CD25+ T regulatory cells activation |
3.13 |
|
Lyophilized human cells stored at room temperature preserve multiple RNA species at excellent quality for RNA sequencing |
3.12 |
|
Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer |
3.12 |
|
Direct Isolation and Characterization of Human Nephron Progenitors. |
3.1 |
|
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells |
3.09 |
|
RNA-seq analysis of control and Myc-induced U2OS cells |
3.09 |
|
A novel Menin-MLL inhibitor induces specific chromatin changes and eradicates disease in models of MLL-rearranged leukemia [RNA-Seq II] |
3.08 |
|
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response |
3.06 |
|
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells (RNA-Seq) |
3.04 |
|
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells |
3.04 |
|
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 |
3.03 |
|
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 |
3.03 |
|
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia revealed by RNA-sequencing. |
3.01 |
|
Tracking transcriptional changes in a species-specific manner during experimental hepatoblastoma progression in vivo |
2.97 |
|
Mutually Exclusive CBC-Containing Complexes Contribute to RNA Fate. |
2.89 |
|
The MLL-AF9 and MLL-AF4 oncofusion proteins bind a distinct enhancer repertoire and target the RUNX1 program in MLLr AML |
2.85 |
|
Nascent RNA Sequencing after NMYC activation in SH-EP MYCNER cells |
2.84 |
|
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq |
2.84 |
|
Tracking distinct RNA populations using efficient and reversible covalent chemistry |
2.8 |
|
Cancerous inhibitor of PP2A (CIP2A) Constrains Th17 Differentiation by Modulating STAT3 Signaling |
2.79 |
|
Expression by CD133+ cells isolated from the adult human exocrine pancreas |
2.78 |
|
Effect of PRDM11 depletion in U2932 cells |
2.77 |
|
IMP3 regulated gene expression in breast cancer cells |
2.75 |
|
Functional Importance of eRNAs for Estrogen-dependent Gene Transcriptional Activation |
2.71 |
|
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture |
2.7 |
|
mRNA expression profile of Lymphocytes |
2.7 |
|
Binding to SMN2 pre-mRNA-Protein complex elicits specificity for small molecule splicing modifiers |
2.69 |
|
COMBINING BET AND MEK INHIBITORS SYNERGISTICALLY TARGETS NRAS MUTANT MELANOMA |
2.66 |
|
Single cell RNA sequencing reveals microglia-like cells in cerebrospinal fluid during virologically suppressed HIV |
2.66 |
|
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line [RNA-Seq] |
2.65 |
|
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line |
2.65 |
|
Role of microRNAs in the interaction between Salmonella and the host cell |
2.65 |
|
DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells [RNA-seq] |
2.64 |
|
DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells |
2.64 |
|
Silencing p300 in MCF7 cells to study expression and alternative splicing |
2.64 |
|
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes |
2.56 |
|
MYC interacts with the G9a histone methyltransferase to drive transcriptional repression and tumorigenesis |
2.54 |
|
RNA-sequencing of healthy human skeletal myocytes |
2.53 |
|
Epigenetic reprogramming of immune cells in women with PCOS impact genes controlling reproductive function |
2.53 |
|
Epigenetic reprogramming of immune cells in women with PCOS impact genes controlling reproductive function [RNAseq] |
2.53 |
|
Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA] |
2.52 |
|
mRNA profiles of JMJD3 overexpression- and JMJD3 knockout- HL-60 cells |
2.5 |
|
lncRNA-PCAT1 knockdown effect on the gene expression of androgen independent LNCaP (LNCaP-AI) cell line |
2.5 |
|
Transcriptome profiling of HepG2 cells upon treatment of the menin-MLL inhibitor MI-503 or DMSO |
2.5 |
|
Gene expression profiles in response to proanthocyanidins in pancreatic cancer cells |
2.49 |
|
Increased Serine and One Carbon Pathway Metabolism by PKCl/i Deficiency Promotes Neuroendocrine Prostate Cancer |
2.48 |
|
Increased Serine and One Carbon Pathway Metabolism by PKCl/i Deficiency Promotes Neuroendocrine Prostate Cancer [RNA-seq] |
2.48 |
|
The impact of stanniocalcin 1 on the transcriptome of human cord blood stem/progenitors |
2.47 |
|
Changes in CD34 and Erythroid Progenitor Transcriptome After RUNX3 Kock-down |
2.46 |
|
RNA-seq analyisis of PUM2 knockout cells |
2.46 |
|
Iron response of HepG2 cells |
2.43 |
|
Transcriptome profiles of moderate dysplasia in oral mucosa associated with malignant conversion |
2.43 |
|
DGCR8 acts as a novel adaptor for the exosome complex to degrade double-stranded structured RNAs |
2.42 |
|
Plasma cell mitochondrial pyruvate import controls the duration of humoral immunity. |
2.4 |
|
Spliceosomal disruption of the non-canonical BAF complex in cancer |
2.39 |
|
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] |
2.38 |
|
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution |
2.38 |
|
Ribosome profiling upon inhibition of eIF4A |
2.38 |
|
Gene expression changes due to PARP knockdown in human cells |
2.36 |
|
YTHDF1 Amplifies Wnt/β-Catenin Signaling to Promote Intestinal Stemness |
2.35 |
|
Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during Epithelial-to-Mesenchymal Transition [ESRP KD] |
2.35 |
|
Flura-seq identifies organ-specific adaptations in metastasis-initiating cells |
2.34 |
|
Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity |
2.34 |
|
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector |
2.32 |
|
Seletive inhibition of CDK9 in DLBCL cell lines |
2.3 |
|
RNA-Guided Human Gene Activation by Cas9/CRISPR-Based Engineered Transcription Factors |
2.25 |
|
Smad5 acts as an intracellular pH messenger and maintains bioenergetic homoeostasis |
2.25 |
|
Cajal bodies are linked to genome conformation [RNA-Seq] |
2.24 |
|
Cajal bodies are linked to genome conformation |
2.24 |
|
ILF2 Regulates RNA Splicing of DNA Damage Response Genes to Confer Poor Prognosis in 1q21-Amplified Multiple Myeloma |
2.22 |
|
Time series single-cell transcriptomic analysis of AEC2 directed differentiation |
2.18 |
|
Solid phase chemistry to covalently and reversibly capture thiolated RNA |
2.17 |
|
Gene expression signatures of innate lymphoid cells from human blood |
2.17 |
|
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] |
2.12 |
|
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid |
2.12 |
|
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 |
2.11 |
|
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics] |
2.1 |
|
miRNAs affected by antagomiR-17 treatment |
2.09 |
|
JAK2 is dispensable for maintenance of JAK2 mutant B-cell acute lymphoblastic leukemias |
2.09 |
|
Comparative gene expression profiling of MHH-CALL4 cells subject to pharmacological JAK2 inhibitor treatment (ruxolitinib or CHZ868) or shRNA-mediated JAK2 depletion in vitro |
2.09 |
|
LncRNA NONHSAT113026 represses renal cell carcinoma tumorigenesis through interacting with NF-κB/p50 and SLUG |
2.08 |
|
Activation of a SOX2-dependent transcriptional regulatory circuit drives glioblastoma. |
2.05 |
|
CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia |
2.01 |
|
Effect of low-dose sorafenib and alkylating agents in inflammation and angiogenesis in breast cancer |
2.01 |
|
The cohesin complex prevents Myc-induced replication stress |
2.0 |
|
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues] |
1.97 |
|
Rnase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs |
1.93 |
|
Measure transcript integrity using RNA-seq data |
1.93 |
|
RNA-sequencing of the GSI treatment of the CUTLL1 cell line |
1.92 |
|
RNAseq of human monocyte cell line (U937-Cas9) WT or IRF2KO |
1.89 |
|
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins |
1.88 |
|
RNA-sequencing of cells derived from the site of inflammation of Juvenile Idiopathic Arthritis patients |
1.88 |
|
Epigenetic profiling and RNA-sequencing of Juvenile Idiopathic Arthritits (JIA) patients |
1.88 |
|
Next generation sequencing of the transcriptome in MCF-7 cells with/without SRA knockdown |
1.88 |
|
LIN28A Over-expression RNAseq |
1.87 |
|
RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21 |
1.86 |
|
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 |
1.85 |
|
FBP2 inhibits sarcoma progression by restraining mitochondrial biogenesis |
1.83 |
|
Splicing function of mitotic regulators links R-loop mediated DNA damage to tumor cell killing |
1.82 |
|
RNA-Sequencing data of Varicella Zoster Virus (VZV)-infected human dermal fibroblasts (HDF) |
1.82 |
|
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] |
1.82 |
|
Gene expression profiling of human MSC-educated macrophages vs. classical macrophages from bone marrow and blood |
1.79 |
|
Epigenetic reprogramming of melanoma cells by vitamin C treatment |
1.78 |
|
CD48-dependent protective autophagy in conventional human T cells promotes restimulation-induced cell death resistance |
1.78 |
|
An Argonaute phosphorylation cycle promotes microRNA-mediated silencing [whole transcriptome RNA-seq] |
1.78 |
|
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [mutant MEF2C] |
1.77 |
|
Transcriptional impact of MTHFD2 in Human Aortic Endothelial Cells |
1.76 |
|
Epigenomes and transcriptomes of human monocytes before and after in vivo exposure to Bacillus Calmette-Guérin vaccine |
1.76 |
|
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma |
1.75 |
|
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells |
1.75 |
|
Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells (RNA-seq) |
1.75 |
|
RNA-seq analysis upon ARID1B overexpression |
1.74 |
|
Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis |
1.73 |
|
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer |
1.73 |
|
RNA transcriptome analysis of IRF1 and IRF3 knockout in immortalized primary hepatocytes infected with hepatitis A virus |
1.72 |
|
PRDM1 inhibits proliferation of human colon cancer organoids |
1.71 |
|
Oncogenic MYC induces a dependency on the spliceosome in human cancer |
1.71 |
|
Gene expression profiles of 4-1BB+PD-1-high, 4-1BB-PD-1-high, and PD-1-int tumor-infiltrating CD8 T cells in hepatocellular carcinoma |
1.69 |
|
RNA-seq of PC3 prostate cancer cell line xenografts in mice administered the ghrelin receptor antagonist [D-Lys3]-GHRP-6 or PBS for two weeks |
1.67 |
|
The Genetic Landscape of Diamond-Blackfan Anemia |
1.66 |
|
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing |
1.64 |
|
Differential YAP expression in glioma cells induces cell competition and promotes tumorigenesis |
1.64 |
|
Rate of elongation by RNA polymerase II is influenced by specific gene features and histone modifications |
1.61 |
|
ERK signaling regulates opposing functions of JUN family transcription factors in prostate cancer cell migration |
1.59 |
|
Mitochondrial phosphoenolpyruvate carboxykinase (PCK2) regulates metabolic adaptation and glucose-independent tumor cell growth |
1.58 |
|
Isolation and sequencing of AGO-bound RNAs reveals characteristics of stem-loop processing in vivo |
1.57 |
|
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation |
1.57 |
|
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture |
1.57 |
|
Gene expression analysis of CD4+ and CD4- ILC1 subsets by RNAseq |
1.57 |
|
RNA sequencing of human mammary epithelial cells |
1.56 |
|
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets |
1.55 |
|
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition |
1.55 |
|
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] |
1.55 |
|
The LRF/ZBTB7A transcription factor is a BCL11A-independent repressor of fetal hemoglobin |
1.5 |
|
RNA-Seq analysis of JIB-04 effects on global cellular transcription and HIV in 2D10 T cells |
1.49 |
|
Analysis of HPV16 E2 host gene expression using TERT immortalized keratinocytes (NOKs) cell lines and RNA-sequencing |
1.45 |
|
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF |
1.45 |
|
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma non-targeting shRNA negative control (SHC002V) with puromycin selection RNAseq |
1.44 |
|
CAR T cell trogocytosis and cooperative killing regulate tumour antigen escape |
1.43 |
|
Knock-down of Ror1 in MDA-MB-231 cell line decreases cell invasiveness |
1.42 |
|
Zone dependent distinctive gene expression profile of the normal human liver tissue |
1.42 |
|
Genes directly regulated by NF-κB in human hepatocellular carcinoma HepG2 |
1.42 |
|
Genes directly regulated by NF-κB in human hepatocellular carcinoma HepG2 [RNA-seq] |
1.42 |
|
Human Treg IFNg/IL-10 subpopulations |
1.42 |
|
Isolation and Functional Interrogation of Adult Human Prostate Epithelial Stem Cells at Single Cell Resolution |
1.41 |
|
mRNA expression levels in splenic human mononuclear cells of mock- and HIV-1-infected humanized mice |
1.39 |
|
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process (RNA-seq) |
1.38 |
|
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process |
1.38 |
|
Promoter of lncRNA gene *PVT1* is a tumor suppressor DNA element |
1.37 |
|
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and PVT1 Knockdown by CRISPRi in MDA-MB-231 human breast cancer cell line |
1.37 |
|
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells |
1.35 |
|
transcriptome studies of BRD4 inhibitor BDF-1253 on renal clear carcinoma 786-O cells |
1.35 |
|
Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples |
1.34 |
|
Specific modulation of HIV RNA splicing and upregulation of anti-inflammatory miR-124 by the new drug candidate ABX464 |
1.29 |
|
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [UNSWCD] |
1.28 |
|
microRNAs with an AAGUGC seed motif constitute an integral part of a signaling network driving NSCLC cell proliferation |
1.27 |
|
Mutant KRAS/BRAF Reprograms the Enhancer Landscape via GATA1 to Drive Chemoresistance |
1.25 |
|
RNA-seq data |
1.25 |
|
Comparative gene expression profiling of human primary endotheliocytes cultivated on polyurethane-based electrospun 3D matrices and natural decellularized vein |
1.25 |
|
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes |
1.24 |
|
Characterisation of the myeloid differentiation process of human hematopoietic stem cells |
1.22 |
|
A stably self-renewing adult blood-derived induced neural stem cell exhibiting patternability and epigenetic rejuvenation |
1.22 |
|
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit |
1.22 |
|
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells |
1.22 |
|
RNASEQ Analysis of sh-TRC and sh-MIR100HG in the triplex negative breast cancer |
1.21 |
|
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling |
1.2 |
|
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm |
1.2 |
|
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity |
1.2 |
|
Functional significance of the HIV-1 Tat signature amino acid residues |
1.19 |
|
Functional Inflammatory Profiles Distinguish Myelin-Reactive T Cells from Patients with Multiple Sclerosis |
1.16 |
|
KRASG12C inhibition produces a driver-limited state revealing collateral dependencies |
1.15 |
|
Universal alternative splicing of noncoding exons |
1.13 |
|
HMGA2 Promotes Long-Term Engraftment and Myelo-Erythroid Differentiation of Human Hematopoietic Stem and Progenitor Cells |
1.13 |
|
PolyA-sequencing in IMR-32 cells treated with THZ531 or DMSO |
1.13 |
|
Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways |
1.07 |
|
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] |
1.04 |
|
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid |
1.04 |
|
Identification of a LIF-responsive replication-competent human β cell |
1.03 |
|
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet |
1.01 |
|
RNA seq analysis of human macrophages after treatment of glimepiride versus empagliflozin. |
1.0 |
|
RNAseq of ribosomal fractionation to assess the effect of CBFB on translation regulation |
0.99 |
|
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique |
0.98 |
|
RNA-seq analysis reveals endogenous aryl hydrocarbon receptor regulation is highly associated with eicosanoid synthesis and tumor necrosis factor activity in MCF-7 cancer cells |
0.97 |
|
Transcriptomics analysis of gene expression in normal and YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 or SRSF10 deficient human HeLa cells |
0.97 |
|
A transcriptional regulatory network connects mitochondrial biogenesis and metabolic shift with stem cell commitment to hepatic differentiation |
0.95 |
|
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells |
0.94 |
|
Dermal endothelial cells of type 2 diabetic patients |
0.93 |
|
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 |
0.92 |
|
Gene expression profile of differentially recognized Mtb-epitopes as a function of disease history |
0.92 |
|
Measuring the effect of MYC on transcription during the DNA double-strand break response by RNA-seq of newly synthesized transcripts |
0.91 |
|
Human Adult Sorted Live Cell Erythroblasts RNA-Seq. |
0.9 |
|
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation |
0.84 |
|
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) |
0.84 |
|
Gene expression profile of HGC27 gastric cancer cell p53 KO and KD |
0.84 |
|
Gene Expression Analysis of HUVEC Seeded rBEL Contructs at Low and High Phases of Glucose Consumption |
0.84 |
|
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy |
0.81 |
|
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation II |
0.8 |
|
CBFβ-MYH11 fusion blocks hematopoietic differentiation via repression of a GATA2 gene program |
0.79 |
|
RNA-seq of HEK293T cells overexpressing TET1-FL or TET1-ALT |
0.79 |
|
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu |
0.77 |
|
SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer |
0.77 |
|
Human MAIT cells exit peripheral tissues and re-circulate via lymph in steady state conditions |
0.76 |
|
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] |
0.76 |
|
Impact on erythroid progenitor type on erythroid differntiation |
0.75 |
|
Disease modelling of core pre-mRNA splicing factor haploinsufficiency |
0.73 |
|
SREBP1 drives Keratin 80-dependent cytoskeletal changes and invasive behavior in endocrine resistant ERα breast cancer |
0.73 |
|
Regulators of cellular heterogeneity in basal-like breast cancer influence symmetric versus asymmetric division rates (shRNA targeting) |
0.72 |
|
BBBomics - Human Blood Brain Barrier Transcriptomics Hub |
0.7 |
|
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] |
0.7 |
|
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) |
0.68 |
|
High-resolution comparative analysis of great ape genomes |
0.68 |
|
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) |
0.67 |
|
Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency [RNA-seq] |
0.67 |
|
Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency |
0.67 |
|
Treatment of prostate cancer cells with S-adenosylmethionine leads to genomewide alterations of transcription profiles |
0.66 |
|
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis |
0.66 |
|
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis [RNA-seq] |
0.66 |
|
Wnt1 silences CC/CXC motif chemokine genes in dendritic cells and induces adaptive immune resistance in lung adenocarcinoma |
0.66 |
|
The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set) |
0.65 |
|
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling |
0.63 |
|
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling (RNA-seq) |
0.63 |
|
Drug combination of 17-AAG and Belinostat on MDA-MB-231 breast cancer cells |
0.63 |
|
Physiologic expression of Sf3b1K700E causes impaired erythropoieses, aberrant splicing, and sensitivity to pharmacologic spliceosome modulation |
0.63 |
|
JUNB is a critical AP1 component for SMAD2/3 binding after TGFβ stimulation [RNA-seq] |
0.62 |
|
SMAD2/3 are redirected to novel sites in MCF10A MII after prolonged TGFβ stimulation |
0.62 |
|
Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology |
0.61 |
|
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays |
0.61 |
|
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection |
0.6 |
|
Next Generation Sequencing Facilitates Quantitative Analysis of UVB(20mJ/cm2 and 40mJ/cm2) exposed and untreated HaCaT keratinocytes Transcriptomes |
0.57 |
|
H1609088 Human RNA-Sequencing |
0.56 |
|
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis |
0.56 |
|
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq] |
0.56 |
|
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 2] |
0.55 |
|
Functional genomic analysis of the haploinsufficient tumor suppressor, CUX1 |
0.55 |
|
siRNA-mediated knockdown |
0.53 |
|
Poly(A)-ClickSeq resolves CF25-mediated alternative poly-adenylation, HeLa |
0.52 |
|
Pseudouridylation of tRNA-derived fragments steers translation control in stem cells [Polysome-Seq] |
0.52 |
|
Expression of MERTK based on Multiple Sclerosis (MS) risk haplotype |
0.52 |
|
Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue |
0.51 |
|
Functional Significance of U2AF1 S34F Mutation in Lung Adenocarcinomas |
0.51 |
|
Race-specific transcriptome and Long non-coding RNA of ADT-resistant African-American prostate cancer cell models. |
0.51 |
|
RNA-Seq and expression data from human adipose tissue |
0.51 |
|
Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases |
0.51 |
|
A Non-Canonical Nuclear Activity Triggered by Small RNAs and Argonaute Proteins in Human Cells |
0.5 |
|
PolyA-sequencing in IMR-32 neuroblastoma cells with shRNA mediated depletion of CDK12, CDK13 or GFP. |
0.49 |
|
Effect of PDZ domain binding Kinase inhibition using TOPK-32 (called PBKi) on C4-2 cell transcriptome |
0.48 |
|
Human naïve pluripotent stem cells exhibit X chromosome dampening and X-inactivation (RNA-Seq) |
0.48 |
|
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia |
0.45 |
|
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] |
0.45 |
|
RNA-seq analysis of Retinoic Acid and Non-treated Control hiPSCs |
0.43 |
|
Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing |
0.41 |
|
Interleukin-1β induces mitochondrial DAMP production to activate STING-dependent innate immune programs |
0.41 |
|
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export |
0.38 |
|
Ex vivo Dynamics of Human Glioblastoma Cells in a Microvasculature-on-a-Chip System Correlates with Tumor Heterogeneity and Subtypes |
0.36 |
|
Systematic analysis of gene expression profiles controlled by hnRNP Q and hnRNP R, two closely related human heterogeneous nuclear ribonucleoproteins. |
0.35 |
|
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) |
0.34 |
|
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates |
0.34 |
|
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer |
0.34 |
|
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer [RNA-seq] |
0.34 |
|
single cell RNA-seq from GM12878 (ENCSR673UIY) |
0.33 |
|
Highly-motile versus unsorted MDA-MB-231 breast cancer cells |
0.3 |
|
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates |
0.3 |
|
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates [RNA-seq] |
0.3 |
|
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo [RNA-Seq] |
0.3 |
|
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo |
0.3 |
|
LKB1, Salt-Inducible Kinases, and MEF2C are linked dependencies in acute myeloid leukemia (RNA-Seq) |
0.3 |
|
LKB1, Salt-Inducible Kinases, and MEF2C are linked dependencies in acute myeloid leukemia |
0.3 |
|
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome |
0.29 |
|
Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts |
0.28 |
|
MBNL1-dependent modulation of gene expression in MDA-MB-231 breast cancer cells |
0.28 |
|
4sUDRB-seq: measuring transcription elongation and initiation genomewide |
0.26 |
|
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes |
0.24 |
|
Transcriptome analysis in a radiosensitive and a radioresistant cell line after ionizing radiation |
0.24 |
|
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? |
0.23 |
|
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α |
0.22 |
|
Regulation of Cell Cycle to Stimulate Adult Cardiomyocyte Proliferation and Cardiac Regeneration |
0.21 |
|
Induction of Cardiomyocyte Proliferation [pz-822_human] |
0.21 |
|
Identification of metabolically distinct adipocyte progenitor cells in human adipose tissues |
0.2 |
|
RNA seq analysis of human Fetal and adult derived Enterospheres |
0.18 |
|
B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis |
0.17 |
|
RNA-Seq following PCR-based sorting reveals rare cell transcriptional signatures |
0.17 |
|
A rare subpopulation of melanoma cells with low expression of metastasis suppressor NME1 has a neural crest-like phenotype and is highly metastatic in vivo |
0.17 |
|
RNA-Seq of polysome profiling fractions and whole cell lysates of UVB-irradiated N-TERT keratinocytes |
0.16 |
|
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. |
0.15 |
|
Functional TRIM24 degraders via conjugation of ineffectual bromodomain and VHL ligands [RNA-seq] |
0.15 |
|
Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles |
0.15 |
|
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation |
0.13 |
|
single cell RNA-seq from Purkinje cell (ENCSR888LYA) |
0.13 |
|
LncRNA NMR knockdown and overexpression in esophageal squamous cell carcinoma cell lines |
0.11 |
|
Genetic-to-epigenetic Therapy for Pancreatic Cancer |
0.11 |
|
Role of cervicovaginal microbiota in genital inflammation |
0.09 |
|
Unraveling cis-regulatory elements by mapping structural changes in mRNAs |
0.08 |
|
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation |
0.08 |
|
Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans. |
0.07 |
|
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia |
0.07 |
|
RNA sequencing of isogenic BRCA2 haploinsufficient vs. wild-type T-ALL cells |
0.05 |
|
Mutational landscape of aggressive natural killer-cell leukemia and drug profiling highlight JAK-STAT signaling as a therapeutic target in NK-cell malignancies |
0.05 |
|
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors |
0.05 |
|
Targets mediated microRNA arm-imbalance promotes gastric cancer progression [lncRNA] |
0.03 |
|
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells |
0.02 |
|
Dissecting the single-cell transcriptome network underlying gastric premalignant lesions and early gastric cancer [10x genomics] |
0.0 |
|
Apoptosis enhancing drugs overcome innate platinum resistance in CA125 negative tumor initiating populations of high grade serous ovarian cancer |
0.0 |
|
Targeting Spt5-Pol II small-molecule inhibitors uncouple distinct activities and reveal additional regulatory roles |
0.0 |