Gene Query: NDUFS4

Dataset Description Geneva Score
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 22.38
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 20.32
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 19.11
Effects of NSUN2 deficiency on the mRNA 5-methylcytosine modification and gene expression profile in HEK293 cells (RNA-Seq) 18.91
The X-linked DDX3X RNA helicase dictates translation re-programming and metastasis in melanoma 14.73
Single-cell transcription profiling in KS1 patient iPSCs and NPCs 14.1
Comprehensive comparative analysis of 5’ end RNA sequencing methods 13.8
MicroRNA (miR)-211 loss promotes metabolic vulnerability and BRAF inhibitor sensitivity in melanoma 13.69
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 12.92
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression 12.87
A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks 12.37
Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods 11.81
Transcriptional response to the HSP70 inhibitor MAL3-101 in parental rhabdomyosarcoma cells and isogenic acquired-resistance lines. 11.67
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo 10.96
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [RNA-seq] 10.96
ATF4 inhibition by p62 represses stromal metabolic reprogramming and tumorigenesis II 10.73
Global analysis of enhancer targets: Mosaic-seq 10.54
Expression by CD133+ cells isolated from the adult human exocrine pancreas 10.49
Generating Patterned Kidney Organoids for Studying Development and Diseases 10.39
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] 10.14
Human serum and heparin-free platelet lysate as appropriate xeno-free alternatives for production of human MuStem cell batches 9.81
Mitochondrial phosphoenolpyruvate carboxykinase (PCK2) regulates metabolic adaptation and glucose-independent tumor cell growth 9.58
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response 9.57
A novel lncRNA GAS1 promotes gastric carcinogenesis and acts as a modular scaffold of WDR5 and KAT2A complexes to specify the histone modification pattern [RNA-seq] 9.57
ChIP-seq and RNA-seq in BGC823 cells after downregulation of GAS1 expression 9.57
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection 9.55
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions 9.51
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 9.37
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 9.32
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 9.24
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements 9.06
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements [RNA-seq] 9.06
Loss of histone macroH2A1 in hepatocellular carcinoma cells promotes paracrine-mediated chemoresistance and CD4+CD25+ T regulatory cells activation 8.8
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 8.36
The comparison of high-throughput single-cell RNA-seq methods 8.1
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 8.05
Transcriptome analysis of human immortilized astrocytes reprogrammed into dopaminergic neurons 7.93
Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. 7.75
Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. 7.75
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 7.65
WNK1 kinase and the termination factor PCF11 connect nuclear mRNA export with transcription 7.58
Uridilation by TUT4/7 restricts retrotransposition of human Line-1s 7.51
The regulartory role of ZCCHC24 in splicing machinery 7.19
Transcriptome profiles of moderate dysplasia in oral mucosa associated with malignant conversion 7.15
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 7.07
RNA-sequencing of healthy human skeletal myocytes 7.04
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 6.95
Identification of transcription start sites for human A549 cell line using ReCappable-seq 6.92
Systematic discovery of endogenous human ribonucleoprotein complexes 6.86
CRISPR adenine and cytosine base editors with reduced RNA off-target activities [CBE] 6.83
CRISPR adenine and cytosine base editors with reduced RNA off-target activities 6.83
Gene expression profile in response to HIF-1α inhibition together with PPARα activation and the postnatal factors (T3, IGF-1 and dexamethasone) in hiPSC-CMs 6.83
CROP-Seq in Primary Human T Cells 6.71
Transcriptomic analysis of senescent cells upon PTBP1 knockdown. 6.56
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression 6.49
Transcriptome of human white and brown adipose tissue biopsies 6.48
single cell RNA-seq from GM12878 (ENCSR673UIY) 6.32
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection 6.21
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection (RNA-sequencing) 6.21
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation 6.19
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) 6.19
RNA transcriptome sequencing analysis of SGC-7901 cells transfected with tcons_00001221 shRNA or control shRNA 6.15
Low carbohydrate diet study for non-alcoholic fatty liver disease patients 6.15
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 6.14
A single-cell atlas of the human cortex reveals drivers of transcriptional changes in Alzheimer’s disease in specific cell subpopulations 6.09
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition. 6.07
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition [RNA-Seq] 6.07
Single-cell analysis of human kidney organoids 6.04
Identification of mRNAs with reduced ribosomal loading upon knock-down of translation factor DAP5 from hESCs. 6.02
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 5.98
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) II 5.97
Prostate Cancer Cell RNA-Seq (PC3E and GS689.Li) 5.75
RNA editing in nascent RNA affects pre-mRNA splicing 5.69
RNA-sequencing of formalin fixed human primary melanoma tissue 5.63
Solid phase chemistry to covalently and reversibly capture thiolated RNA 5.63
A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance 5.61
SMN2 splicing modifiers improve motor function and longevity in mice with spinal muscular atrophy 5.57
Understanding the reproducibility and robustness of the kidney organoid differentiation protocol using RNA-seq 5.56
Detection of internal N7-methylguanosine (m7G) RNA modifications by mutational profiling sequencing 5.48
HNF1A deficiency impairs β-cell fate, granule maturation and function 5.46
Identification of renal resident macrophages across species 5.44
polyA RNA Sequencing Analysis of HTR-8/SVneo cells after lnc-SLC4A1-1 overexpression 5.33
Transcriptome-wide study of the response of human trabecular meshwork cells to the substrate stiffness increase 5.29
Control of human hemoglobin switching by LIN28B-mediated regulation of BCL11A translation (Ribo-seq, RNA-seq) 5.25
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [UNSWCD] 5.24
Impact of HypERrlnc Knockdown on the human pericyte transcriptome 5.24
Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training 5.23
The LRF/ZBTB7A transcription factor is a BCL11A-independent repressor of fetal hemoglobin 5.21
Transcriptome-wide analysis of the role of HTLV-1 Tax PBM in T-Cells from infected humanized-mice (hu-Mice) 5.18
Long non-coding RNA TYKRIL controls pericyte function and survival in the cardiovascular and central nervous system through regulation of p53 activity and PDGFRß expression 5.16
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 5.15
Exploiting drug addiction mechanisms to select against MAPKi resistant melanoma 5.13
RNA sequencing of CACO-2 cells incubated with Bifidobacteria breve grown on human milk oligosaccharides. 5.12
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates 5.07
Effect of venetoclax, tedizolid, and combination treatment on gene expression in a venetoclax-resistant AML cell line 5.06
GREB1 amplifies androgen receptor output in prostate cancer and contributes to antiandrogen resistance 5.04
Sequential regulatory loops as key gatekeepers for neuronal reprogramming in human cells 5.03
Sequential regulatory loops as key gatekeepers for neuronal reprogramming in human cells [RNA-seq] 5.03
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 5.03
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins 4.98
Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (RNA-seq) 4.97
Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia 4.97
Transcriptome profile of HepG2-expressing ATP7B-H1069Q (liver hepatocellular cells) exposed to JNK or p38 Inhibitor 4.92
The SPOP-containing Complex Functions as an E3 Ligase for SETD2 to Regulate Gene-Specific H3K36me3-Coupled Alternative Splicing 4.86
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 4.8
Transcriptional changes in pancreatic cancer cells associated with gemcitabine resistance 4.77
Study functions of ADAR proteins using next generation sequencing of genome and transcriptome 4.76
Transcriptional profiling of microglia; current state of the art and future perspectives 4.75
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 4.7
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_RNA-seq] 4.66
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes 4.66
Measure transcript integrity using RNA-seq data 4.61
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 4.59
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 4.54
Recapitulating and Deciphering Tumor-stroma Microenvironment by Using a “LEGO” like 3D printed microfluidic device 4.54
Role of miR-146a in neural stem cell differentiation and neural lineage determination: relevance for neurodevelopmental disorders 4.52
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 4.48
Effect of CHKA knockdown on C4-2 cell transcriptome 4.48
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells 4.45
Rnase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs 4.45
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq SS] 4.42
mRNA profiles of JMJD3 overexpression- and JMJD3 knockout- HL-60 cells 4.4
β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer 4.4
RNA-seq of naive and primed ES cells (NHSM) 4.32
Synaptic dysfunction in human neurons with Autism associated deletions in PTCHD1-AS 4.3
Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer 4.27
In vitro differentiation of human embryonic stem cells into ovarian follicle-like cells 4.24
Small-molecule targeting of brachyury transcription factor addiction in chordoma 4.21
Hydrogel scaffolds promote neural gene expression and structural reorganization in human astrocyte cultures 4.2
SETDB2 links E2A-PBX1 to cell cycle dysregulation in acute leukemia through CDKN2C repression [sequencing] 4.18
Regulation of protein translation during mitosis 4.13
Transcriptome profiling of HepG2 cells upon treatment of the menin-MLL inhibitor MI-503 or DMSO 4.12
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 4.06
Differentially expressed genes post knock down of lincDUSP26 4.03
SNHG12 knockdown in Human Umbilical Vein Cells under ROS conditions. 4.03
Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis 4.02
Combined inhibition of STAT3 and DNA repair in palbociclib-resistant ER-positive breast cancer 4.01
RNA-seq analysis of Retinoic Acid and Non-treated Control hiPSCs 4.0
SLAM-seq for K562 endogenous mRNA decay 3.99
Oligogenic inheritance of congenital heart disease involving a NKX2-5 modifier 3.99
Oligogenic inheritance of congenital heart disease involving a NKX2-5 modifier [human] 3.99
Genetic-to-epigenetic Therapy for Pancreatic Cancer 3.97
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 3.97
Targeting Taxane-Platin Resistant Lung Cancers with JumonjiC Lysine Demethylase Inhibitors 3.97
Targeting Taxane-Platin Resistant Lung Cancers with JumonjiC Lysine Demethylase Inhibitors (RNA-Seq) 3.97
Bromodomain-containing Protein 4 (BRD4) is Required for the Maintenance of a Mammary Epithelial Phenotype 3.96
Bromodomain-containing Protein 4 (BRD4) is Required for the Maintenance of a Mammary Epithelial Phenotype [RNA-Seq] 3.96
DHX36 is the missing link to understand RNA G-quadruplex structures, mRNA stability, and translation [RNA-seq] 3.96
Generation and persistence of human tissue-resident memory T cells in lung transplantation 3.93
Human Treg IL-12 stimulation 3.91
Transcriptomic profiling of normal human cardiac fibroblast treated with halofuginone 3.9
Sirt6 Oncogene Mediates PI3K/Akt Signaling Activation in Diffuse Large B-Cell Lymphoma 3.89
TT-Seq captures the human transient transcriptome 3.85
hiPSCs unravel aberrant TGFβ signaling as an etiology of left ventricular non-compaction 3.84
RNA-seq and ChIP-seq analysis of BMI1 or RING1B-silenced prostate cancer cells C4-2 3.82
Effect of hyperfractionated irradiation (HFRT) of prostate primary basal cells (PrEPs) on the transcriptome 3.82
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) 3.8
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers 3.78
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers (RNA-Seq) 3.78
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes 3.76
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [d7+d14] 3.73
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 3.69
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells 3.68
Morphological and molecular characterization of human dermal lymphatic collectors 3.67
Potent antitumor activity of Cabozantinib, a c-MET and VEGFR2 Inhibitor, in a Colorectal Cancer Patient-derived Tumor Explant Model 3.55
Proliferation pause as an early blockade of human cellular reprogramming toward pluripotency [RNA-seq analysis] 3.53
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease 3.51
REST and Neural Gene Network Dysregulation in iPS Cell Models of Alzheimer’s Disease (RNA-seq data set) 3.51
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 3.51
Cancer avatars derived from genetically engineered pluripotent stem cells allow for longitudinal assessment of tumor development 3.49
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development 3.48
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 3.47
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia [RNA-seq] 3.45
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia 3.45
Transcriptome analyses of iPSC-derived neural stem/progenitor cells and cerebral organoids from monozygotic twins discordant for schizoaffective bipolar disorder 3.44
Allosteric Antagonist Modulation of TRPV2 by Piperlongumine Impairs Glioblastoma Progression 3.43
Mediator kinase inhibition further activates super-enhancer-associated genes in AML 3.42
Effect in HCT116 cells of 3hr cortistatin A treatment on gene expression. 3.42
RNA-seq of young and quiescent MRC-5 human fibroblasts 3.42
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 3.41
RNA expression analysis of neuroblastoma cell lines treated with epigenetic drugs 3.41
Gene expression in mature and immature human ES-derived beta cells, and sorted beta-cells from adult islets 3.39
HLA peptides derived from tumor antigens induced by inhibition of DNA methylation for development of drug-facilitated immunotherapy 3.38
Gene expression in skeletal muscle in older individuals subject to ten days of complete bed rest. 3.37
SF3B1 Degron knockdown RNA-seq 3.36
The MLL-AF9 and MLL-AF4 oncofusion proteins bind a distinct enhancer repertoire and target the RUNX1 program in MLLr AML 3.36
Splicing function of mitotic regulators links R-loop mediated DNA damage to tumor cell killing 3.35
Human CD4+CD103+ cutaneous resident memory T cells are found in the circulation of healthy subjects 3.35
Epigenome regulation during epidermal lineage commitment [RNA-seq] 3.35
The effect of insulin on mRNA transcription of human pluripotent stem cells 3.35
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells with PolyIC treatment 3.33
AZ1366: An inhibitor of tankyrase and the canonical Wnt pathway that limits the persistence of non-small cell lung cancer cells following EGFR inhibition 3.33
miRNAs affected by antagomiR-17 treatment 3.3
Enhancement of Arterial Specification in Human Pluripotent Stem Cell Cultures Promotes Definitive Hematoendothelial Program with Broad Myelolymphoid Potential 3.29
CDK4/6 inhibitor resistance in prostate cancer 3.28
RNA sequencing of human mammary epithelial cells 3.28
Transcriptional impact of MTHFD2 in Human Aortic Endothelial Cells 3.28
H1609088 Human RNA-Sequencing 3.26
Mutually Exclusive CBC-Containing Complexes Contribute to RNA Fate. 3.25
Chromatin landscape of human visceral and subcutaneous adipocytes 3.23
Transcriptomic analysis of human tonsillar TFH subsets 3.21
Contribution of synergism between PHF8 and HER2 signalling to breast cancer development and drug resistance  3.19
The Polycomb protein BMI1 induces an invasive gene expression signature in melanoma that promotes metastasis and chemoresistance. 3.19
Disease-associated mutation in SRSF2 misregulates splicing by altering RNA binding affinities 3.16
Effect on small molecule RBPJ inhibitor (RIN1) on gene expression in Jurkat cells compared to gamma secretase inhibition and siRNA knockdown of RBPJ 3.16
Comparison of expression profiles of APP-depleted prostate cancer cells (LNCaP) 3.15
Effect of from Human Umbilical Vein Endothelial Cells 3.13
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process 3.12
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process (RNA-seq) 3.12
4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells 3.11
Viral shRNA Knockdown of INS Promotor Activity in EndoC-βH1 Cells  3.11
SLIGRL-induced gene expression changes in NHEK cells 3.1
Global gene expression profiles of cardiomyocytes differentiated from human pluripotent stem cells (hiPSC-CMs) in 3D culture exposed to ethanol 3.09
Gene expression in PANC1 cells treated with Rakicidin 3.09
Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants 3.09
Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy [RNA-Seq] 3.03
Genomic Reorganization of Lamin-Associated Domains in Cardiac Myocytes is Associated with Differential Gene Expression and DNA Methylation in Human Dilated Cardiomyopathy 3.03
RNA sequencing based comparative analysis of human hepatic progenitor cells and their niche from alcoholic steatohepatitis livers 3.0
Nudt3 is a mRNA Decapping Enzyme That Modulates Cell Migration 3.0
Human TFIIH kinase CDK7 regulates transcription-associated epigenetic modification 2.97
Gene expression profiling study by RNA-seq in PDX model based diffuse type gastric cancers. 2.94
EWSR1 influences alternative splicing through direct and indirect mechanisms 2.88
Strand-specific Dual RNA-seq of Bronchial Epithelial cells Infected with Influenza A/H3N2 Viruses Reveals Splicing of Gene Segment 6 and Novel Host-Virus Interactions 2.84
NOTCH1 activation in breast cancer confers sensitivity to inhibition of SUMOylation 2.82
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation 2.79
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation [bulk RNA-Seq] 2.79
mRNA sequencing identifies differential gene expresssion profiles between ASCC3 knock-down cells and control cells 2.76
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 2.76
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets 2.76
Dual role of CSL (RBP-Jk) and NOTCH1 in cancer-associated fibroblast genome stability and expansion [RNA-seq] 2.75
Dual role of CSL (RBP-Jk) and NOTCH1 in CAF 2.75
Next Generation Sequencing of control (Untreated), PAN injured and Adriamycin injured human podocytes 2.75
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 2.75
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 2.75
Hematopoietic Stem and Progenitor Cells from Human Pluripotent Stem Cells via Transcription Factor Conversion of Hemogenic Endothelium 2.75
Single-nucleotide-resolution mapping of HBV promoters using CAGE 2.74
RNA transcriptome sequencing analysis of SGC-7901 cells transfected with ENST00000431060 shRNA or control shRNA 2.73
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (ChIP-seq & RNA-seq datasets) 2.71
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors 2.7
Krüppel-like Transcription Factor-10 (KLF10) Provides a Negative Feedback Mechanism to Suppress TGFβ-Induced Epithelial-to-Mesenchymal Transition [RNA-Seq] 2.7
Krüppel-like Transcription Factor-10 (KLF10) Provides a Negative Feedback Mechanism to Suppress TGFβ-Induced Epithelial-to-Mesenchymal Transition 2.7
RNA-Sequencing data of Varicella Zoster Virus (VZV)-infected human dermal fibroblasts (HDF) 2.68
Transcriptomic analysis of senescent cells upon PTBP1 knockdown and EXOC7 knockdown 2.65
Changes in RNA expression in human oral cavity carcinoma cells as a result of LDB1 reduction 2.64
High capacity of the endoplasmic reticulum to prevent secretion and aggregation of amyloidgenic proteins 2.64
DDX3X regulation of global translation is impaired by medulloblastoma-associated mutations 2.63
DDX3X regulation of global translation is impaired by medulloblastoma-associated mutations [RNA-Seq] 2.63
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 2.63
Ribosome profiling upon inhibition of eIF4A 2.61
CXCR4 regulates extra-medullary myeloma through epithelial-mesenchymal transition-like transcriptional activation 2.6
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution 2.57
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] 2.57
The long non-coding RNA MALAT1 contributes to the pathogenesis of multiple sclerosis through alternative splicing and backsplicing regulation 2.57
Gene expression changes caused by KRAS in MCF-10A 2.54
Transcriptome analysis of PRMT6 knock-out in NT2/D1 cells 2.54
Genomic location of PRMT6-dependent H3R2 methylation is decisive for the transcriptional outcome of associated genes 2.54
ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [12Z_1A_PI3K_RNA-seq] 2.51
Gene expression profiling of human MSC-educated macrophages vs. classical macrophages from bone marrow and blood 2.49
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 2.49
Transcriptome landscape of HeLa response upon triamcinolone acetonide 2.46
Gene expression profiles in NORAD knockout and PUMILIO overexpressing cells 2.44
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response [bulk RNA-seq] 2.43
Gene expression analysis of CD4+ and CD4- ILC1 subsets by RNAseq 2.38
HEK293 TFAM Knockout Expression Study 2.36
KDM1A confers invasive and metastatic attributes in lung adenocarcinoma by modulating a non-canonical Integrin ß3-KRAS signaling pathway 2.32
Expression level comparison under dividing and quiescent states in human primary fibroblasts 2.26
FBP2 inhibits sarcoma progression by restraining mitochondrial biogenesis 2.25
HMGA2 Promotes Long-Term Engraftment and Myelo-Erythroid Differentiation of Human Hematopoietic Stem and Progenitor Cells 2.24
Modeling Human Cancer-induced Cachexia (Human) 2.22
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity 2.19
ARID1A and ARID1B loss in HCT116 cells 2.18
Effects of a nutritional supplement in older individuals subject to ten days of complete bed rest. 2.18
Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells that Contribute to the Fibrous Cap 2.18
RNA-seq analyisis of PUM2 knockout cells 2.18
Integrating the Epigenome to Identify Novel Drivers of Hepatocellular Carcinoma 2.18
Gene Expression Profiling of WT and KDM3A Knocked out Cell 2.18
Genome-wide maps of chromatin state and Gene Expression Profiling in HCT116 cells 2.18
MicroRNA-125a-5p overexpression in human macrophages 2.16
SREBP1 drives Keratin 80-dependent cytoskeletal changes and invasive behavior in endocrine resistant ERα breast cancer 2.14
Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma 2.13
Transcriptome profiling of omental adipose tissues in human obesity by RNA-Seq 2.12
Transcriptome profiling of A2M treated A549 Cell Line Samples 2.11
Effect of PDZ domain binding Kinase inhibition using TOPK-32 (called PBKi) on C4-2 cell transcriptome 2.09
Thymine DNA Glycosylase as a novel target for melanoma: effect of TDG silencing on gene expression in SK-mel-28 melanoma cells 2.07
Binding to SMN2 pre-mRNA-Protein complex elicits specificity for small molecule splicing modifiers 2.07
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation I 2.06
Expression charcaterization of an internal protocol developed to differentiate RPE cells 2.06
Effect of PBK knockdown on C4-2 cell transcriptome 2.05
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 2.04
RNA-seq of cultured human kidney peritubular microvascular endothelial cells following exposure to cyclosporine A 2.02
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells 2.0
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq] 2.0
RNA-seq analysis upon ARID1B overexpression 1.99
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 1.99
scRNASeq analysis of cycling cardiomyocytes 1.97
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies 1.96
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies [RNA-Seq] 1.96
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 1.95
Global modulation of signaling pathways by SARM RAD140 in AR/ER+ breast cancer xenografts 1.95
mRNA expression profiling in MDA-MB-231 (LM1) cells with a tet-incible MBD2 or p66α knock down, or treated with MBD2-targeting small molecule ABA or APC 1.94
RNA-Sequencing approach for the identification of novel long non-coding RNA biomarkers in colorectal cancer 1.93
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues] 1.92
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies [RNA-seq data set 2] 1.9
Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B-cell Responses to Influenza Hemagglutinin 1.89
Evidence for rRNA 2'-O-methylation plasticity: control of intrinsic translational capabilities of human ribosomes 1.89
Capturing the biology of mild versus severe disease in a pluripotent stem cell-based model of Familial Dysautonomia 1.89
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes 1.88
RNA-seq of PC3 prostate cancer cell line xenografts in mice administered the ghrelin receptor antagonist [D-Lys3]-GHRP-6 or PBS for two weeks 1.87
Early response of human ovarian and fallopian tube surface epithelial cells to norepinephrine 1.86
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy 1.83
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 1.81
BRG1 governs Glucocorticoid Receptor interactions with chromatin and pioneer factors across the genome 1.81
CENPA-Bound Genes and Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cells 1.79
Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cell Lines 1.79
RNA binding protein CPEB1 remodels host and viral RNA landscapes [RNA-Seq] 1.74
Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency 1.73
Low cytosolic folate cycling is a hallmark of U251 glioblastoma cells reprogramming towards pluripotency [RNA-seq] 1.73
RNA-seq after siRNA targeting DDX24 applied to iHUVECs cell lines 1.72
MYC interacts with the G9a histone methyltransferase to drive transcriptional repression and tumorigenesis 1.71
Newly defined ABCB5+ dermal mesenchymal stem cells promote healing of chronic iron overload wounds via secretion of interleukin-1 receptor antagonist 1.71
Gene expression profiles in response to proanthocyanidins in pancreatic cancer cells 1.7
Evaluating and comparing the Transcriptome of (human) Hek 293 based cells, expressing either CHD3 or CHD4 1.67
Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology 1.66
Expression profiling of etoposide-induced senescent cells 1.66
Image based identification and targeting of cancer stem cells in pancreatic adenocarcinoma (PDAC) 1.66
Transcriptomic analysis to functionally map the intrinsically disordered domain of EWS/FLI [Experiment 1] 1.66
DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure 1.66
Iron response of HepG2 cells 1.65
Characterization of EZH2-deficient human embryonic stem cells [ChIP-seq and bulk RNA-seq] 1.62
Dilated cardiomyopathy vs Myocarditis 1.6
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 1.6
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] 1.6
BBBomics - Human Blood Brain Barrier Transcriptomics Hub 1.6
RNA-Seq analysis of prostate cancer cell line LNCaP treated with vehicle, androgen, androgen and IMTPPE, androgen and JJ-(+)-450, androgen and JJ-(-)450, androgen and enzalutamide 1.6
Convergent roles of ATF3 and CSL in chromatin control of CAF activation 1.57
Convergent roles of ATF3 and CSL in chromatin control of CAF activation [RNA-seq] 1.57
Transcription factors OVOL1 and OVOL2 induce the mesenchymal to epithelial transition in human cancer 1.57
RNA seq analysis of human macrophages after treatment of glimepiride versus empagliflozin. 1.56
JQ1 +/- Vemurafenib in BRAF mutant melanoma (A375) 1.55
Transcriptome of melanoma cell lines resistant to inhibition of the MAPK pathway. 1.53
Single-cell analysis of adult human ovary using 10X genomics 1.53
Physiologic expression of Sf3b1K700E causes impaired erythropoieses, aberrant splicing, and sensitivity to pharmacologic spliceosome modulation 1.5
Targeted reactivation of FMR1 transcription in FXS embryonic stem cells 1.5
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation 1.47
Global transcriptome analysis of WT versus HEB-/- hESCs 1.46
Oncogenic MYC induces a dependency on the spliceosome in human cancer 1.46
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase 1.42
RNA-seq analysis of PRMT5-regulated genes in irradiated/non-irradiated LNCaP cells 1.42
The bromodomain protein BRD4 regulates splicing during heat shock 1.41
Inactivation of CFTR by CRISPR/Cas9 alters transcriptional regulation of inflammatory pathways and other networks 1.4
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition 1.4
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] 1.4
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 1.39
Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 1.37
CAR T cell trogocytosis and cooperative killing regulate tumour antigen escape 1.37
Proximity-CLIP provides a snapshot of occupied cis-acting elements on RNA in different subcellular compartments on a transcriptome-wide scale 1.36
p63 controls the enhancer landscape during keratinocyte differentiation 1.36
The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas 1.34
Gene expression profile in breast cancer cells 1.33
Genome-wide profile of cJun and p27 and gene expression profile in breast cancer cells 1.33
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 1.32
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 1.32
Analysis of transcrptomes of Danon patient derived hiPSC-cardiomyocytes by RNA-deep Sequencing 1.29
Identification of transcripts altered upon LIN-41 knockdown in human embryonic stem cells 1.28
Role of COP1 on MAP kinase transcriptional output in gastrointestinal stromal tumor 1.27
Mapping of DHT-responsive or -independent AR-binding sites induced by activated Src in prostate cancer cell lines 1.25
Mapping of DHT-responsive or -independent AR-binding sites induced by activated Src in prostate cancer cell lines [RNA-seq] 1.25
RNAseq of ribosomal fractionation to assess the effect of CBFB on translation regulation 1.25
Gene Expression Analysis of HUVEC Seeded rBEL Contructs at Low and High Phases of Glucose Consumption 1.23
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 1.21
RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected uterine smooth muscle cells (USMC) 1.2
Exogenous rescue of KLHL9 in SF210 cell line 1.2
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 1.19
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 1.18
Human Treg NaCl stimulation 1.18
RNA sequencing of matched nephrectomy samples [RNA-seq] 1.17
Genome-wide maps of H3K36me3 in ccRCC and RNA-seq of matched nephrectomy samples 1.17
HMGA1 and FOXM1 synergistically regulate a common gene network modulating angiogenesis in breast cancer 1.15
The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC derived cardiomyocytes. 1.15
siRNA-mediated knockdown 1.14
Microvesicle-mediated delivery of miR-1343: impact on markers of fibrosis 1.13
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet 1.12
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 1.12
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 1.12
Translating transcriptome of cancer cells in situ in mesenchymal-rich tumor microenvironment 1.11
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 1.1
Epigenetic reprogramming of melanoma cells by vitamin C treatment 1.1
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu 1.08
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 2] 1.08
UPF1/SMG7-dependent MicroRNA-mediated Gene Regulation 1.08
RNA-sequencing of tamoxifen-resistant and -sensitive breast cancer cell lines. 1.06
NOTCH signaling is activated in and contributes to resistance in enzalutamide-resistant prostate cancer cells 1.05
Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma 1.03
Comparative total RNA and mRNA sequencing and systems analysis reveals nascent transcriptional response to early HIV-1 infection in a CD4+ T cell line 1.03
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 1.0
Ets homologous factor has critical roles in epithelial dysfunction in airway disease [RNA-seq] 0.99
Ets homologous factor has critical roles in epithelial dysfunction in airway disease 0.99
Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue 0.98
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [SLAM-Seq] 0.97
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HEK293 cells treated with or without TNF-alpha 0.97
Deletions in the ATAD3 gene cluster cause cerebellar developmental defects with mitochondrial DNA abnormalities owing to local cholesterol insufficiency 0.96
Global transcriptomic analyses of bronchial epithelial cells exposed to 5 ng/mL TGF-β1 and 10 nM Estrogen individually and in combination 0.93
Discovery and verification of liver cancer marker genes and variable scission based on second-generation sequencing data analysis 0.93
RNA isoform screens reveal the essentiality and tumor suppressor activity of ultraconserved poison exons 0.91
Interleukin-1β induces mitochondrial DAMP production to activate STING-dependent innate immune programs 0.91
RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood 0.9
RNA-seq analysis of control and CDK12-depleted ovarian cancer cells 0.89
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling 0.88
HNRNPM-regulated splicing dependencies in prostate cancer [RNA-Seq] 0.85
HNRNPM-regulated splicing dependencies in prostate cancer 0.85
Functional Significance of U2AF1 S34F Mutation in Lung Adenocarcinomas 0.83
Next Generation Sequencing (RNA-Sequencing) for the analysis of RUNX3 targets in H460, H460-ERT2-RUNX3 WT and H460-ERT2-RUNX3 MT(K94/171R mutation) 0.83
The cohesin complex prevents Myc-induced replication stress 0.82
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells 0.81
RNA-sequencing of pediatric idiopathic dilated cardiomyopathy patients and healthy controls 0.8
Functional significance of the HIV-1 Tat signature amino acid residues 0.78
Transcriptome response to 4h IL-1b stimulation of primary chondrocytes 0.77
Sodium butyrate ameliorates aSyn-induced transcription deregulation and DNA damage 0.77
YTHDF1 Amplifies Wnt/β-Catenin Signaling to Promote Intestinal Stemness 0.77
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics] 0.76
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 0.74
Identification of miRNA-mRNA regulatory network for Human Atrial Aging [mRNA] 0.74
Identification of miRNA-mRNA regulatory network for Human Atrial Aging 0.74
Role of FGFR1 in neuronal devlopment 0.74
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV] 0.74
Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing 0.72
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation 0.72
Identifying markers predicting successful graft outcome for clinical translation of hESC-based cell therapy for Parkinson’s disease 0.69
Oncogenic Antisense LncRNA P14AS Regulates Expression of ANRIL through AUF1 Binding 0.69
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene 0.68
TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. 0.66
Uridylation-mediated RNA quality control pathway in mammalian cytoplasm [RNA-Seq] 0.66
CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia 0.63
RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs 0.62
Effects of darunavir upon gene expression in kidney tubular cells after transduction with HIV or EGFP-control lentivirus 0.61
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling 0.6
Long-term in vitro expansion of epithelial stem cells enabled by pharmacological inhibition of PAK1-ROCK-Myosin II and TGF-β signaling (RNA-seq) 0.6
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [TAV] 0.59
RNA-seq analysis of control and ZC3H18-depleted ovarian cancer cells 0.57
Ex vivo Dynamics of Human Glioblastoma Cells in a Microvasculature-on-a-Chip System Correlates with Tumor Heterogeneity and Subtypes 0.57
Cap-specific terminal N6-methylation of RNA by an RNA polymerase II-associated methyltransferase. 0.54
An optimization system for isolating and sequencing of single human colon cancer cells 0.52
Epigenetic Control of Skeletal Development by the Histone Methyltransferase Ezh2 0.52
The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. [RNA-Seq] 0.5
The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. 0.5
A Novel Population of Human Cardiac Resident Mesenchymal Stem Cells 0.49
Cell cycle dynamics of human pluripotent stem cells primed for differentiation 0.47
Next Generation Sequencing Quantitative Analysis of Wild Type and AML1-ETO Related Fusion Circular RNA (F-CircAE) Knockdown Kasumi-1 Cells Transcriptomes 0.47
Dissecting the single-cell transcriptome network underlying gastric premalignant lesions and early gastric cancer [10x genomics] 0.44
O-glcnAc reprograms cellular energetics 0.43
Function and hormonal regulation of GATA3 in human first trimester placentation 0.42
Targets of CDK12 on ZR-75-30 breast cancer cells (RNA-seq) 0.42
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique 0.41
Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis 0.39
A Non-Canonical Nuclear Activity Triggered by Small RNAs and Argonaute Proteins in Human Cells 0.38
Hsa-miR-139-5p/HNRNPF axis modulates gene-transcripts balance in thyroid cancer cells 0.36
EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq] 0.35
Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells 0.35
High-throughput sequencing of the human hepatic progenitor cell niche in PSC and HCV. 0.34
Networks of cultured iPSC-derived neurons reveal the human synaptic activity-regulated adaptive gene program 0.33
Gene expression profile of calcified and normal tricuspid aortic valves by RNA sequencing. 0.31
Sex differences in transcriptomic profiles in aged kidney cells of renin lineage 0.31
Identification of downstream genes regulated by YAP1 through knockdown and overexpression of YAP1 in U251 cell with a stably expression of mutant APP 0.3
Transcriptional profiling of SF295 cells following MTF1 knockout by CRISPR/Cas9 0.29
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit 0.24
Functional TRIM24 degraders via conjugation of ineffectual bromodomain and VHL ligands [RNA-seq] 0.23
SQSTM1/p62-directed metabolic reprogramming is essential for normal neurodifferentiation 0.23
Characterizing the contrasting roles of JMJD3 and UTX histone demethylases in T cell acute lymphoblastic leukemia [GSKJ4_RNA-seq] 0.22
Identification of expressed and conserved human non-coding RNAs 0.21
Transcriptional landscape changes during human embryonic stem cell derivation 0.21
A toxicogenomics approach to screen chlorinated flame retardants tris(2-chloroethyl) phosphate and tris(2-chloroisopropyl) phosphate for potential health effects 0.21
Macrophages redirect phagocytosis by non-professional phagocytes and influence inflammation 0.2
Mutational landscape of aggressive natural killer-cell leukemia and drug profiling highlight JAK-STAT signaling as a therapeutic target in NK-cell malignancies 0.18
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 0.17
The ETS transcription factor ELF1 regulates a critical, broadly antiviral program distinct from the type I interferon response 0.17
The ETS transcription factor ELF1 regulates a critical, broadly antiviral program distinct from the type I interferon response 0.17
CRISPR-Cas9 based screen for p53-bound enhancers that function in oncogene-induced senescence 0.17
Dermal endothelial cells of type 2 diabetic patients 0.13
Functional genomic analysis of the haploinsufficient tumor suppressor, CUX1 0.13
Measuring the effect of MYC on transcription during the DNA double-strand break response by RNA-seq of newly synthesized transcripts 0.13
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 0.12
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 0.12
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm 0.11
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.1
Gene expression profiles in HMC3 cells after exposure to ketamine or its active metabolites: 2R6R-HNK and 2S6S-HNK 0.1
Azithromycin induces epidermal differentiation and multivesicular bodies in airway epithelia 0.1
Transcriptomics analysis of gene expression in normal and YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 or SRSF10 deficient human HeLa cells 0.08
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 0.05
The transition from proliferation to quiescence in glioblastoma stem-like cells requires Ca2+ signaling and mitochondria remodeling 0.05
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.05
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes 0.04
Acquisition of a hybrid E/M state is essential for tumorigenicity of basal breast cancer cells 0.04
SMYD2 specificly regulate BIX-01294 induced TP53 target genes revealed by RNA-Seq 0.04
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence 0.04
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence [RNA-seq] 0.04
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.03
RNA-Seq and expression data from human adipose tissue 0.03
Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases 0.03
High-resolution comparative analysis of great ape genomes 0.02
Diarrhea in lymphocytic colitis: ERK1/2-dependent ENaC dysregulation and claudin-4-, -5- and -8-related barrier defects 0.02


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