Gene Query: NFU1

Dataset Description Geneva Score
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of H1 and H1 after SNAI1 deletion at Day2 after human early hematopoietic differentiation . 53.87
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 28.6
Distinct regulation of alternative polyadenylation and gene expression by nuclear poly(A) polymerases 20.02
Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells 14.52
EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq] 14.52
Systematic discovery of endogenous human ribonucleoprotein complexes 12.01
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 11.82
RNA-seq data from human SGBS adipocytes differentiated with marine oxohexadecenoic acids 11.02
RNA-seq analysis of control and ZC3H18-depleted ovarian cancer cells 10.99
transcriptomic profiling of HEK293 cells upon individual knockdown of the splicing factors RBM17, U2SURP or CHERP 10.08
miRNAs affected by antagomiR-17 treatment 9.94
Identification of mRNAs with reduced ribosomal loading upon knock-down of translation factor DAP5 from hESCs. 9.12
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 9.09
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection 9.07
mRNA expression profiling in MDA-MB-231 (LM1) cells with a tet-incible MBD2 or p66α knock down, or treated with MBD2-targeting small molecule ABA or APC 8.83
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 8.72
Generating Patterned Kidney Organoids for Studying Development and Diseases 8.38
iRNA-seq: Computational method for genome wide assessment of acute transcriptional regulation from total RNA-seq data 8.33
Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods 8.13
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 8.05
Identification of transcription start sites for human A549 cell line using ReCappable-seq 8.04
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 7.75
HNF1A deficiency impairs β-cell fate, granule maturation and function 7.53
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 7.25
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 7.02
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 7.02
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 6.96
Discovery of naturally occurring ESR1 mutations during acquisition of resistance to endocrine therapy in widely used estrogen receptor positive breast cancer cell lines [RNA-Seq] 6.9
Discovery of naturally occurring ESR1 mutations during acquisition of resistance to endocrine therapy in widely used estrogen receptor positive breast cancer cell lines 6.9
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 6.56
12hr 5-FU treatment vs. DMSO in SJSA cells (from 'A kinase independent role for CDK19 in p53 response') 6.53
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 6.21
RNA sequencing of HepG2 cells treated with estradiol or estrogen receptor agonist 6.14
CROP-Seq in Primary Human T Cells 6.03
Regulation of mRNA half-life by an inhibitor of human decapping enzyme Dcp2 following transcription shutoff in HEK293T cells 5.98
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 5.98
ABCB5 is activated by MITF and b-catenin and is associated with melanoma differentiation 5.82
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites 5.82
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response 5.81
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells 5.81
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 5.77
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 5.7
Transcriptomic but not genomic variability confers phenotype of breast cancer stem cells 5.67
MAIT cell RNA sequencing 5.62
Bromodomain protein BRD4 is a transcriptional repressor of autophagy and lysosomal function 5.32
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 5.3
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 5.19
Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy 5.17
RNA-seq analysis of HT-29, MCF10A, and MDA-MB-436 cells 5.1
RNA sequencing based comparative analysis of human hepatic progenitor cells and their niche from alcoholic steatohepatitis livers 5.09
Long non-coding RNA TYKRIL controls pericyte function and survival in the cardiovascular and central nervous system through regulation of p53 activity and PDGFRß expression 5.06
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 4.97
Co-transcriptional loading of RNA export factors shapes the human transcriptome 4.97
RNAseq of HEK293 cells after Chtop knockdown 4.97
Loss of histone macroH2A1 in hepatocellular carcinoma cells promotes paracrine-mediated chemoresistance and CD4+CD25+ T regulatory cells activation 4.85
scRNASeq analysis of cycling cardiomyocytes 4.82
Dtx3L and Androgen Signaling in Prostate Cancer 4.76
Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training 4.66
Study functions of ADAR proteins using next generation sequencing of genome and transcriptome 4.59
IL-33 activates tumor stroma to promote intestinal polyposis 4.53
Transcriptome profiling of omental adipose tissues in human obesity by RNA-Seq 4.5
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene 4.48
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 4.27
Tracking distinct RNA populations using efficient and reversible covalent chemistry 4.25
Heterogeneous nuclear ribonucleoprotein C1/C2 links transcriptional and splicing actions of 1,25-dihydroxyvitamin D 4.24
Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA-Seq] 4.14
Gene expression profiling of leukemia cells following asparagine depletion 4.08
RNA-Seq Samples of siTFE3 in 8988T PDA Cell Line to Investigate Transcriptional Control of the Autophagy-Lysosome System 4.07
Expression by CD133+ cells isolated from the adult human exocrine pancreas 4.07
Transcriptomic analysis of senescent cells upon PTBP1 knockdown. 4.04
Genome-wide analysis of the Integrator complex (HTS) 4.01
Genome-wide analysis of the Integrator complex 4.01
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity 4.01
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 4.01
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 4.01
Post-transcriptional manipulation of TERC reverses molecular hallmarks of telomere disease 4.0
Gene expression changes after LOC550643 silencing 3.87
ZEB1 insufficiency causes corneal endothelial cell state transition and altered cellular processing 3.85
Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference [RNA-Seq] 3.8
Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference 3.8
Genome-wide Gene Expression Profiling in DLBCL Cell Lines Treated with CUDC-907 3.77
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] 3.76
Quantitative comparison between cellular mRNAs and exosomal mRNAs in human iPSC-derived motor neurons 3.75
Identification of renal resident macrophages across species 3.73
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia [RNA-seq] 3.73
CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia 3.73
Chromatin landscape of human visceral and subcutaneous adipocytes 3.7
Combined cistrome and transcriptome analysis of SKI in AML cells identifies SKI as a co-repressor for RUNX1 3.7
Transcriptome analysis of SKI knock-out in HL60 cells 3.7
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing 3.65
ARID1A regulates condensin II distribution and chromosomal partition [RNA-seq] 3.6
ARID1A regulates condensin II distribution and chromosomal partition 3.6
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells 3.54
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] 3.54
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells 3.54
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells (RNA-Seq) 3.54
MPTAC determines APP fragmentation via sensing sulfur amino acid catabolism 3.53
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α 3.5
CXCR4 is a host factor that regulates Plasmodium development in hepatocytes 3.48
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 3.46
RNA-seq analysis of control and CDK12-depleted ovarian cancer cells 3.44
Whole Transcriptome RNASeq Data for Cell-Sorted Antibody Secreting Cells (ASC) 3.42
RNA sequencing of CACO-2 cells incubated with Bifidobacteria breve grown on human milk oligosaccharides. 3.39
RNA-Sequencing of human dermal lymphatic endothelial cells (HDLEC) treated with siRNA targeting YAP/TAZ and YAP5SA 3.36
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 3.34
Translating transcriptome of cancer cells in situ in mesenchymal-rich tumor microenvironment 3.34
Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer 3.31
CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair 3.31
Tumors with TSC mutations are sensitive to CDK7 inhibition through NRF2 and glutathione depletion 3.28
To investigate the decay constants (half-lives) of transcript isoforms generated by alternative polyadenylation in proliferating and quiescent cells 3.26
Regulation of protein translation during mitosis 3.21
RNA-dependent RNA polymerase sequence specificities of capsnatching viruses are tailored to aid viral replication 3.2
Potent antitumor activity of Cabozantinib, a c-MET and VEGFR2 Inhibitor, in a Colorectal Cancer Patient-derived Tumor Explant Model 3.19
Rorc disruption in human FG pancreatic cancer cells 3.19
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process (RNA-seq) 3.18
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process 3.18
CRISPR adenine and cytosine base editors with reduced RNA off-target activities 3.17
CRISPR adenine and cytosine base editors with reduced RNA off-target activities [CBE] 3.17
Transciptome profiling of NoDice and RNaseIII null cells prior to and after polyIC treatment 3.17
A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks 3.11
RNAseq Study in CC-671 Treated Cal-51 Cells 3.09
single cell RNA-seq from GM12878 (ENCSR673UIY) 3.07
Mapping interactions for the TNIP2 hub protein 3.06
Distinct gene expression profile of Huh7 cell lines stably overexpressing CRABP1 or 2 3.02
Co-regulation of splicing by Rbfox1 and hnRNP M 3.02
Co-regulation of splicing by Rbfox1 and hnRNP M [hnRNPM k-d+Rbfox1 RNA-Seq] 3.02
Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes 3.02
Global analysis of enhancer targets: Mosaic-seq 3.02
IGF2BP3 controls cancer cell invasiveness by modulation RISC function 2.99
Transcriptome analysis of U87 cells upon LINC00152 knockdown 2.99
Integrating single-cell transcriptomic data across different conditions, technologies, and species 2.99
Genes directly regulated by NF-κB in human hepatocellular carcinoma HepG2 [RNA-seq] 2.98
Genes directly regulated by NF-κB in human hepatocellular carcinoma HepG2 2.98
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 2.97
Transcriptome analysis of PRMT6 knock-out in NT2/D1 cells 2.95
Genomic location of PRMT6-dependent H3R2 methylation is decisive for the transcriptional outcome of associated genes 2.95
Dynamic epigenetic remodeling underlies microRNA-mediated transdifferentiation of human adult fibroblasts into neuronal subtypes 2.93
mRNA expression profile of Lymphocytes 2.92
SLAM-seq for K562 endogenous mRNA decay 2.89
Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing 2.87
Genome-wide expression analysis of human hTert immortalized fibroblasts after donwregulation of MCM7 2.86
Inhibition of SF3B1 by molecules targeting the spliceosome in Rh18 cells 2.86
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions 2.86
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation [RNA-Seq] 2.85
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation 2.85
RNA-seq analysis of A498 cell line treated with siSETD2 or si-NC 2.83
Expression changes in melanoma cell lines under BRAFi treatment timepoints [RNA-Seq.CellLine.batch4] 2.82
Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer 2.8
Epigenetic reprogramming at estrogen-receptor binding sites alters the 3D chromatin landscape in endocrine resistant breast cancer [RNA-seq] 2.8
Browning of human adipocytes requires KLF11 and reprogramming of PPARγ super-enhancers 2.77
Seletive inhibition of CDK9 in DLBCL cell lines 2.75
Wnt addiction of genetically defined cancers reversed by PORCN inhibition 2.74
Single-cell RNA-seq reveals novel cell differentiation dynamics during human airway epithelium regeneration 2.73
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice 2.72
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] 2.72
Direct Isolation and Characterization of Human Nephron Progenitors. 2.7
Improving fibroblast characterization using single-cell RNA sequencing: an optimized tissue disaggregation and data processing pipeline 2.7
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 2.67
Transcriptomic analyssis following EHMT1/2 inhibition 2.66
U2AF1 mutations alter splice site recognition in hematological malignancies 2.65
Global mRNA expression profile in cardiac progenitor cells generated by ISX-9 2.65
Global expression profiles in cardiac progenitor cells generated by ISX-9 2.65
COMBINING BET AND MEK INHIBITORS SYNERGISTICALLY TARGETS NRAS MUTANT MELANOMA 2.64
SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression 2.64
Human MAIT cells exit peripheral tissues and re-circulate via lymph in steady state conditions 2.63
Gene expression profile in response to HIF-1α inhibition together with PPARα activation and the postnatal factors (T3, IGF-1 and dexamethasone) in hiPSC-CMs 2.63
Effects of NSUN2 deficiency on the mRNA 5-methylcytosine modification and gene expression profile in HEK293 cells (RNA-Seq) 2.63
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 2.63
MYT1 attenuates neuroblastoma cell differentiation by inhibiting retinoic acid signaling pathway 2.6
Single-cell analysis of human kidney organoids 2.6
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 2.59
TOP2B disturbed the quality of human oocytes with advanced maternal age 2.58
Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration 2.54
The lung-enriched p53 mutants V157F and R158L/P regulate a novel transcriptome in lung cancer 2.52
Hematopoietic Stem and Progenitor Cells from Human Pluripotent Stem Cells via Transcription Factor Conversion of Hemogenic Endothelium 2.51
Integrative Genomic Analysis Reveals Widespread Enhancer Regulation by p53 in Response to DNA Damage 2.51
Differential gene expressions in the heart of hypertrophic cardiomyopathy patients 2.5
Mitochondrial phosphoenolpyruvate carboxykinase (PCK2) regulates metabolic adaptation and glucose-independent tumor cell growth 2.5
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase 2.47
Isolation and sequencing of AGO-bound RNAs reveals characteristics of stem-loop processing in vivo 2.47
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (ChIP-seq & RNA-seq datasets) 2.45
RNA-seq of tumor cells following angiopellosis extravasation 2.43
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 2.42
AZ1366: An inhibitor of tankyrase and the canonical Wnt pathway that limits the persistence of non-small cell lung cancer cells following EGFR inhibition 2.42
FMRP facilitates the nuclear export of N6-methyladenosine-containing mRNAs 2.42
Integrated multi-omics approach reveals a role of ALDH1A1 in lipid metabolism in human colon cancer cells 2.42
Modeling and characterization of the dynamic gene regulatory networks underlying cancer drug resistance based on time-course RNA-seq data 2.4
Transcriptional profile of CAOV2 ovarian cancer cells with TAZ silencing 2.38
Patient-derived luminal breast cancer xenografts with progestins 2.37
RNAseq analysis of patient-derived luminal breast cancer xenografts treated with progestins 2.37
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 2.36
Iron response of HepG2 cells 2.35
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression 2.34
Epigenome Editing by a CRISPR/Cas9-Based Acetyltransferase Activates Genes from Promoters and Enhancers 2.33
Knockdown of ADNP in HCT116 colon cancer cells 2.33
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 2.29
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) 2.28
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 2.28
FBP2 inhibits sarcoma progression by restraining mitochondrial biogenesis 2.27
Epigenetic Inactivation of Cysteine Dioxygenase Type 1 Contributes to ROS-dependent Progression of Colorectal Cancer 2.26
Effect of selective glucocorticoid receptor modulation (SGRM) on gene expression in human prostate cancer cell lines 2.26
Oncolytic reactivation of KSHV as a therapeutic approach for primary effusion lymphoma: RNA-sequencing of PEL cell lines during KSHV reactivation 2.24
In situ CAPTURE of chromatin interactions by biotinylated dCas9 2.21
RNA-seq transcriptonal profiling in human K562 cells with or without dCas9 and sgRNAs 2.21
Transcriptome of EBV-infected gastric cancer cell lines 2.21
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 2.21
A comparison of gene expression between lesional and non-lesional derived keratinocytes of Hailey-Hailey disease patients. 2.21
The comparison of high-throughput single-cell RNA-seq methods 2.19
Transcriptional profiling of microglia; current state of the art and future perspectives 2.18
An optimization system for isolating and sequencing of single human colon cancer cells 2.18
Functional role of SLIT2 and ROBO1 in trophoblasts 2.18
Effect of ER stress on MUC1 kidney disease patient derived cells and and treatment by BRD4780 2.16
Single-nucleotide-resolution mapping of HBV promoters using CAGE 2.14
Evidence for rRNA 2'-O-methylation plasticity: control of intrinsic translational capabilities of human ribosomes 2.13
Reducing the structure bias of RNA-Seq reveals a large number of non-annotated non-coding RNA 2.12
The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas 2.1
POLR3G Dependent PolyA+ and smallRNA Transcriptomes in Human Pluripotent Stem Cells 2.1
Single-cell analysis of adult human ovary using 10X genomics 2.1
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 2.09
Image based identification and targeting of cancer stem cells in pancreatic adenocarcinoma (PDAC) 2.09
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates 2.09
Luminal lncRNAs Regulation by ERα-controlled Enhancers in a Ligand-independent Manner in Breast Cancer Cells 2.08
MicroRNA (miR)-211 loss promotes metabolic vulnerability and BRAF inhibitor sensitivity in melanoma 2.08
A peninsular structure coordinates asynchronous differentiation with morphogenesis to generate pancreatic islets [bulk vs buds] 2.08
Transcriptome of human white and brown adipose tissue biopsies 2.06
N6-methyladenine DNA Modification in Glioblastoma 2.04
N6-methyladenine DNA Modification in Glioblastoma [RNA-seq] 2.04
Transcriptomic analysis of human tonsillar TFH subsets 2.03
RNA sequencing to study transcriptomic changes in DLD-1 (colorectal adenocarcinoma) cells exposed to soft polyacrylamide matrices (~2 kPa and ~55 kPa) for short time scale of 90 minutes 2.03
Charaterization of genetic alterations and gene expression signatures found in BCR-ABL inhibitor-resistant KCL-22 subpopulations and single clones 2.02
Global transcriptional analysis of human extended pluripotent stem cells, human primed pluripotent stem cells, mouse extended pluripotent stem cells, and mouse embryonic stem cells by RNA-seq 2.01
Global transcriptional analysis and genome-wide analysis of chromatin state in extended pluripotent stem cells, primed pluripotent stem cells, and naïve pluripotent stem cells 2.01
RNA-Seq analysis of JIB-04 effects on global cellular transcription and HIV in 2D10 T cells 2.0
Gene expression in control and DOCK8 CRISPR KHYG1 NK cells 1.99
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers 1.97
Transcription factor p63 bookmarks genomic loci in epithelial cells and regulates a subset of target genes during epidermal differentiation through dynamic enhancers (RNA-Seq) 1.97
Binding to SMN2 pre-mRNA-Protein complex elicits specificity for small molecule splicing modifiers 1.96
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 1.92
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition 1.92
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] 1.92
Transcriptomic analysis of senescent cells upon PTBP1 knockdown and EXOC7 knockdown 1.91
A transcriptome-wide divergence in protein translation scales with LIN28B expression 1.9
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 1.9
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 1.87
A RUNX2-mediated Epigenetic Regulation of the Survival of p53 Defective Cancer Cells 1.87
Chromatin-informed inference of transcriptional programs in gynecologic cancers [RNA-Seq] 1.86
Chromatin-informed inference of transcriptional programs in gynecologic cancers 1.86
Profiling of protrusion-enriched RNAs from human breast cancer cell line MDA-MB-231 1.85
Knockout human reveal an essential role for Paternally Expressed 10 (PEG10) in JEG3 cell line development 1.84
Transcriptome profiling of HepG2 cells upon treatment of the menin-MLL inhibitor MI-503 or DMSO 1.82
Isolation and Functional Interrogation of Adult Human Prostate Epithelial Stem Cells at Single Cell Resolution 1.81
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid 1.81
Oncogenic MYC induces a dependency on the spliceosome in human cancer 1.81
Global Mapping of Human RNA-RNA Interactions 1.81
RNA sequence of mRNA in HUVEC cells after depleting EGFL6 1.8
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21 1.8
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21 (RNA-Seq) 1.8
MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells 1.78
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner 1.77
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner [Huh-7] 1.77
Identification of alternatively spliced transcripts in brain metastatic derivatives of MDA-MB-231 breast cancer cells in response to RBM47 expression 1.75
The identification of RBM47 binding sites and RBM47-dependent alternative splicing events in brain metastatic breast cancer cells 1.75
A cell-permeable stapled peptide inhibitor of the estrogen receptor/coactivator interaction 1.75
RNA sequencing of CACO-2 cells incubated with bifidobacteria grown on human milk oligosaccharides. 1.74
Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants 1.71
Real-time observation of light-controlled transcription in living cells 1.69
Early transcriptome profiling of microRNA-mediated neuronal reprogramming [RNA-seq timecourse] 1.68
High capacity of the endoplasmic reticulum to prevent secretion and aggregation of amyloidgenic proteins 1.67
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 1.67
Global analysis of ZNF217 chromatin occupancy in the breast cancer cell genome reveals an association with Eralpha 1.66
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [RNA-seq] 1.66
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo 1.66
A comprehensive single cell transcriptional landscape of human hematopoietic progenitors 1.66
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 1.66
Effect of ILF3 on translation during homeostasis and the antiviral response 1.63
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 1.61
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 1.61
WRN knockout effects upon gene expression in SW48 and OVK18 1.61
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 1.61
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 1.61
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes 1.6
Proteostasis by STUB1/HSP70 complex controls sensitivity to androgen receptor targeted therapy in advanced prostate cancer 1.55
Proteostasis by STUB1/HSP70 complex controls sensitivity to androgen receptor targeted therapy in advanced prostate cancer (RNA-Seq) 1.55
Functional role of CPPED1 in trophoblasts. 1.55
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 1.54
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) 1.53
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation 1.53
SNHG12 knockdown in Human Umbilical Vein Cells under ROS conditions. 1.52
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos 1.52
RNA-seq data of adipocytes co-cocultured with OVCAR5 in Boyden chamber (4d) 1.49
Genome models integrating chromatin contacts and nuclear lamin-genome interactions reveal implications of laminopathy-causing lamin mutations on genome architecture 1.49
Human SETMAR is a DNA sequence-specific histone-methylase with a broad effect on the transcriptome 1.47
Similarity of therapeutic networks induced by a multi-component herbal remedy in neurovascular unit cells 1.47
IRF2 is a master regulator of human keratinocyte stem cell fate [RNA-seq] 1.45
IRF2 is a master regulator of human keratinocyte stem cell fate 1.45
A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance 1.45
The long non-coding RNA MALAT1 contributes to the pathogenesis of multiple sclerosis through alternative splicing and backsplicing regulation 1.45
Valproic acid attenuates hyperglycemia induced complement and coagulation cascade gene expression 1.45
Effect of estrogen (E2) treatment on the C4-12 relative to the MCF7 cells 1.45
RNA-sequencing of healthy human skeletal myocytes 1.43
Smad5 acts as an intracellular pH messenger and maintains bioenergetic homoeostasis 1.4
PolyA-sequencing in IMR-32 neuroblastoma cells with shRNA mediated depletion of CDK12, CDK13 or GFP. 1.4
Rnase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs 1.4
Transcriptomics analysis of gene expression in normal and METTL3 or WTAP deficient Human HeLa cells 1.36
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] 1.34
BBBomics - Human Blood Brain Barrier Transcriptomics Hub 1.34
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer 1.33
Estrogen-independent molecular actions of mutant estrogen receptor alpha in endometrial cancer [RNA-seq] 1.33
APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa 1.32
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies [RNA-Seq] 1.32
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies 1.32
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 1.31
Mutational landscape of splicing genes and functional consequences across 33 cancer types 1.31
SETBP1-WT and SETBP1-G870S epigenetic landscapes 1.3
SETBP1-WT and SETBP1-G870S transcriptional profiles [RNA-Seq] 1.3
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [TAV] 1.3
The bromodomain protein BRD4 regulates splicing during heat shock 1.29
Gene expression profiles of isogenic single-cell derived clones of BRAF-mutated SK-MEL-5 melanoma cell lines 1.26
Gene expression profile of calcified and normal tricuspid aortic valves by RNA sequencing. 1.25
Differential expression analysis of RNA-seq data from melanocytes driven by tumor cell-derived exosomes 1.24
RNA-seq of MDA-MB-231 cells with TET1 knockout 1.24
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo [RNA-Seq] 1.21
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo 1.21
Gene expression signatures of innate lymphoid cells from human blood 1.21
Human Treg IL-12 stimulation 1.19
TT-Seq captures the human transient transcriptome 1.18
CRISPR activation of long non-coding RNAs transiently expressed during cortical neuron differentiation associated with Field, et al, Stem Cell Reports 2018 1.18
p53 activity results in DNA replication fork processivity 1.18
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 1.16
H19 regulates hepatic glucose production by epigenetic modification of Hnf4* 1.16
Identification of genes regulated by Long noncoding RNA H19 in hepatic cells 1.16
The transcriptome and chromatin accessbility landscape of mammalian germline 1.16
Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis 1.13
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes 1.13
Transcriptome-wide analysis of the role of HTLV-1 Tax PBM in T-Cells from infected humanized-mice (hu-Mice) 1.13
Mucosal Profiling of Pediatric-Onset Colitis and IBD Reveals Common Pathogenics and Therapeutic Pathways 1.12
Global loss of epigenetic and transcriptional fidility defines a subclass of cancer with immunotherapy resistance 1.12
A20 regulates canonical wnt-signaling through an interaction with RIPK4 1.12
Lysine benzoylation is a novel histone mark 1.11
Lysine benzoylation is a novel histone mark [RNA-seq] 1.11
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet 1.08
Non-coding and coding transcriptional profiles are significantly altered in pediatric Retinoblastoma tumors 1.08
RNA-seq of naive and primed ES cells (NHSM) 1.06
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells 1.06
Discovery of Drug Candidates that Inhibit and Eliminate Zika Virus Infection in Fetal and Adult Brain 1.04
Comparative whole-transcriptomic analysis between normal and AKAP-Lbc-depleted human embryonic stem cells 1.03
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 1.03
Dilated cardiomyopathy vs Myocarditis 1.02
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 1.02
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 1.01
4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells 1.0
Viral shRNA Knockdown of INS Promotor Activity in EndoC-βH1 Cells  1.0
RNAseq of human monocyte cell line (U937-Cas9) WT or IRF2KO 1.0
Role of NuRD subunits CHD3 and CHD4 in human melanoma cells (RNA-seq) 0.99
Role of NuRD subunits CHD3 and CHD4 in human melanoma cells 0.99
RNA-seq analysis upon ARID1B overexpression 0.99
Metabolism as an early predictor of DPSCs aging 0.97
Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD) 0.97
RNA-seq analysis identifies different transcriptomic types and developmental trajectories of primary melanomas 0.95
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 0.94
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) 0.92
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 0.91
RNA editing in nascent RNA affects pre-mRNA splicing 0.9
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis 0.9
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq] 0.9
Synaptic dysfunction in human neurons with Autism associated deletions in PTCHD1-AS 0.9
Gene expression in mature and immature human ES-derived beta cells, and sorted beta-cells from adult islets 0.9
Expression profiling of ILC transitional populations and Aiolos accessability and H3K27ac histone modifications in transfected MNK3 cells 0.9
RNA-Seq from human ILC transitional populations 0.9
Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans. 0.88
Defective transcription elongation in a subset of cancers confers immunotherapy resistance (human cell lines RNA-Seq) 0.87
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 0.86
Tissue-resident memory T cells mediate immune homeostasis in the human pancreas through the PD-1/PD-L1 pathway 0.86
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 0.84
CENPA-Bound Genes and Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cells 0.84
Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cell Lines 0.84
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 0.83
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] 0.83
Measure transcript integrity using RNA-seq data 0.82
DDX3X regulation of global translation is impaired by medulloblastoma-associated mutations 0.82
DDX3X regulation of global translation is impaired by medulloblastoma-associated mutations [RNA-Seq] 0.82
Effect of digoxin treatment on the gene and alternative splice expression in human pluripotent stem cells- derived mesenchymal stem cells 0.81
Hsa-miR-371a-5p and hsa-miR-518a-3p regulated genes in choriocarcinoma cells 0.81
Lipid catabolism inhibition sensitizes prostate cancer cells to antiandrogen blockade 0.78
Role of FGFR1 in neuronal devlopment 0.78
Unraveling cis-regulatory elements by mapping structural changes in mRNAs 0.76
KDM1A confers invasive and metastatic attributes in lung adenocarcinoma by modulating a non-canonical Integrin ß3-KRAS signaling pathway 0.75
The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC derived cardiomyocytes. 0.74
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 0.74
RNA-Seq of CD34+ Bone Marrow Progenitors from Healthy Donors 0.73
MBNL1-dependent modulation of gene expression in MDA-MB-231 breast cancer cells 0.72
Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts 0.72
Genome-wide profiling of cervical RNA-binding proteins identified HPV regulation of RNASEH2A expression by viral E7 and E2F1 0.72
RNASeq of mouse, human, and non-human primate primary dermal fibroblasts to poly(I:C) transfection 0.69
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation I 0.69
Functional Haploid Human Oocytes Generated from Polar Body Genomes (RNA-Seq) 0.69
Functional Haploid Human Oocytes Generated from Polar Body Genomes 0.69
Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis 0.68
Unique features and clinical importance of acute alloreactive immune responses 0.67
RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected uterine smooth muscle cells (USMC) 0.63
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) 0.62
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships 0.62
A Non-Canonical Nuclear Activity Triggered by Small RNAs and Argonaute Proteins in Human Cells 0.6
ARID1A is a critical regulator of luminal identity and therapeutic response in oestrogen receptor-positive breast cancer (RNA-Seq) 0.59
Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells that Contribute to the Fibrous Cap 0.59
Transcriptome sequencing of K-562 cells 0.58
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 0.54
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 0.54
Low carbohydrate diet study for non-alcoholic fatty liver disease patients 0.53
Differentiation of Induced Pluripotent Stem Cells towards Mesenchymal Stromal Cells is Hampered by Culture in 3D Hydrogels 0.53
Differentiation of Induced Pluripotent Stem Cells towards Mesenchymal Stromal Cells is Hampered by Culture in 3D Hydrogels [RNA-Seq] 0.53
RNA sequencing of 13 T-cell acute lymphoblastic leukemia patients (5 TCRAD-MYC translocated T-ALL_8TAL1-LMO2 T-ALL) 0.53
Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma 0.53
Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer 0.52
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu 0.51
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] 0.5
Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs 0.5
Modeling Human Cancer-induced Cachexia (Human) 0.48
Single Cell RNA-sequencing of cell types isolated by FACS from normal human prostates 0.48
Transcriptional profiling of JEG3 cells with HLA-G ablation via deletion of Enhancer L 0.48
Effects of a nutritional supplement in older individuals subject to ten days of complete bed rest. 0.47
RUVBL1/RUVBL2 ATPase Activity Drives PAQosome Maturation, DNA Replication and Radioresistance in Lung Cancer 0.46
Maternal-biased H3K27me3 correlates with paternal-specific gene expression in the human morula 0.46
Adenovirus Small E1A Employs the Lysine Acetylases p300/CBP and Tumor Suppressor Rb to Repress Select Host Genes and Promote Productive Virus Infection 0.46
Adenovirus Small E1A Employs the Lysine Acetylases p300/CBP and Tumor Suppressor Rb to Repress Select Host Genes and Promote Productive Virus Infection [RNA-seq] 0.46
Characterizing the contrasting roles of JMJD3 and UTX histone demethylases in T cell acute lymphoblastic leukemia [GSKJ4_RNA-seq] 0.45
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (TLR perturbation Bulk RNA-Seq) 0.45
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 0.45
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy 0.45
TGF-b-activated LncRNA LINC00115 is a critical regulator for glioma stem-like cell tumorigenicity 0.43
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 2] 0.42
RNA-sequencing of pediatric idiopathic dilated cardiomyopathy patients and healthy controls 0.42
Self-associated molecular patterns mediate cancer immune evasion by engagement of Siglec receptors 0.41
RNA Sequencing Analysis of villus tissues from unexplained recurrent spontaneous abortion patients and controls with induced abortions 0.4
Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients 0.4
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.39
Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome 0.38
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV] 0.36
Gene expression profiles of PD1-high, PD1-intermediate, and PD1-negative tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.35
Inhibition of ERG Activity in Patient Derived Prostate Cancer Xenografts using the Small Molecule Inhibitor YK-4-279 0.35
Functional separation of IL7Rα/KLRG1-defined CD8+ T cell populations in humans 0.31
RNA sequencing of matched nephrectomy samples [RNA-seq] 0.3
Genome-wide maps of H3K36me3 in ccRCC and RNA-seq of matched nephrectomy samples 0.3
Transcriptome of invasive mucinous adnocarcinoma of the lung and adjacent normal lung tissues from 6 patients based on RNA-seq method 0.29
Gene expression profiles of 4-1BB+PD-1-high, 4-1BB-PD-1-high, and PD-1-int tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.27
CRISPR-Cas9 based screen for p53-bound enhancers that function in oncogene-induced senescence 0.26
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.25
Genome-wide modelling of transcription kinetics reveals patterns of RNA processing delays 0.24
Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes 0.23
Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell RNA-seq 0.23
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence 0.22
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence [RNA-seq] 0.22
Evaluating and comparing the Transcriptome of (human) Hek 293 based cells, expressing either CHD3 or CHD4 0.22
Characterization of EZH2-deficient human embryonic stem cells [ChIP-seq and bulk RNA-seq] 0.21
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation 0.21
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 0.18
A MYC/GCN2/eIF2alpha negative feedback loop limits protein synthesis to prevent MYC-dependent apoptosis in colorectal cancer 0.18
Transcriptional analysis of ZIKV-infected Ifnar-/- and Ifnar+/- placentas and IFN-beta (IFN-b) or IFN-lambda (IFN-l) treated human mid-gestation chorionic villus explants 0.17
Analysis of transcriptional differences after IFN-beta (IFN-b) or IFN-lambda (IFN-l) treated human mid-gestation chorionic villus explants 0.17
Re-Wiring 3D Nuclear Architecture by a Single Transcription Factor during Somatic Cell Reprogramming 0.16
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics] 0.16
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 0.15
Identification of differentially spliced genes by wild type or S34F mutation of U2AF1 0.15
Transcriptome profiling of A2M treated A549 Cell Line Samples 0.15
Comprehensive comparative analysis of 5’ end RNA sequencing methods 0.13
Transcriptome analysis of CD8+ T cells from healthy controls and patients wth CD46 deficiency 0.13
Analysis of transcriptomes of healthy donor and CD46 deficient CD8 T cells 0.13
Human Treg NaCl stimulation 0.13
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 0.13
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 0.13
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome 0.13
Transcriptional landscape changes during human embryonic stem cell derivation 0.12
RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood 0.11
Networks of cultured iPSC-derived neurons reveal the human synaptic activity-regulated adaptive gene program 0.1
quanTIseq: quantifying immune contexture of human tumors 0.1
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.1
Transcriptome response to 4h IL-1b stimulation of primary chondrocytes 0.09
Dermal endothelial cells of type 2 diabetic patients 0.09
RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs 0.08
RNA-sequencing of mRNAs from control and CAP-D3 deficient Salmonella infected HT-29 cells 0.08
Dissecting the single-cell transcriptome network underlying gastric premalignant lesions and early gastric cancer [10x genomics] 0.07
Genomic expression analysis of K562 cells expressing shRNA targeting lncRNA-IIRX and control cells 0.07
Interleukin-1β induces mitochondrial DAMP production to activate STING-dependent innate immune programs 0.07
Transcriptome analysis in a radiosensitive and a radioresistant cell line after ionizing radiation 0.07
Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq 0.07
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 0.07
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 0.05
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 0.05
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 0.05
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma 0.04
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma [RNA-Seq] 0.04
Function and hormonal regulation of GATA3 in human first trimester placentation 0.03
RNA-Seq and expression data from human adipose tissue 0.03
Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases 0.03
The secretome of skin cancer cells activates the mTOR/MYC pathway in healthy keratinocytes and converts them into tumorigenic cells 0.02
MALT1 Inhibition Is Efficacious in Both Naïve and Ibrutinib-Resistant Chronic Lymphocytic Leukemia. 0.02
SNHG5 siRNA knock down in HCT116 cells 0.02
Discovering human diabetes-risk gene function with genetics and physiological assays 0.01
The cohesin complex prevents Myc-induced replication stress 0.01
Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue 0.01


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