Gene Query: PDLIM2

Dataset Description Geneva Score
Proteotranscriptomic profiling of potential E6AP targets in prostate cancer cells 43.45
Genome-wide analysis of herpes simplex virus type 1 (HSV-1) infected cells 29.84
Effect of OVO-like 1 knockdown on global transcript expression in differentiated BeWo trophoblast cells 29.58
SMN2 splicing modifiers improve motor function and longevity in mice with spinal muscular atrophy 28.0
An aspartyl protease defines a novel pathway for export of Toxoplasma proteins into the host cell 27.87
The Unfolded Protein Response Regulator, ATF6, Promotes Mesodermal Differentiation 27.63
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 27.13
Transcriptomic profiling of O-GlcNAcylated mRNA-protein complexes by using OG-CLAP in HeLa cells. 26.1
Effects of Freeze-Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression 24.55
RNA-sequencing of human liver tissue 24.51
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing 23.42
Alternative splicing of differentiated myeloid cell transcripts after infection by Anaplasma phagocytophilum impacts a selective group of cellular programs 23.0
Expression levels of genes of NKG2C+ NK cells after in vitro treatment 22.68
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA 21.55
Transcriptome sequencing of human coronary artery smooth muscle cell under treatment of nitrated fatty acid 21.13
PAK4 suppresses RELB to prevent senescence-like growth arrest in breast cancer 20.77
Analysis and expansion of the eosinophilic esophagitis transcriptome by RNA sequencing 19.95
Effect of Toxoplasma gondii efector TgIST on global transcriptome of human foreskin fibroblasts (HFFs) upon type I IFN activation 19.36
Stem and effector CD8 T-cells from human cancers 19.29
Transcriptomic Reprogramming of Prostate Cancer Cells Driven by Stroma-Derived SPINK1 19.26
Redifferentiation of expanded human islet β cells by inhibition of ARX 19.0
Transcriptomic profiling of HeLa cells infected with Salmonella Typhimurium 18.73
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 18.63
Induction of human SST and PV neurons by expressing a single transcription factor LHX6 18.47
Transcriptomic profiling of normal human cardiac fibroblast treated with halofuginone 18.25
Integrated analyses of early responses to radiation in glioblastoma identify new alterations in RNA processing and candidate targets to improve treatment outcomes 17.95
RNA-Seq profiling of day 7 and day 18 kidney organoids differentiated in two batches 17.09
Prostate Cancer Cell RNA-Seq (PC3E and GS689.Li) 17.04
Tricyclic Antidepressants Induce Inactivation of Hepatic Stellate Cell (HSC) Myofibroblasts 16.74
RNA profiling Analysis of the Serum Exosomes Derived from Active and Latent M.tuberculosis infectious Patients 16.58
IL-11 neutralising therapies for the treatment of nonalcoholic steatohepatitis 16.55
RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected EVT cells 16.44
Integrative Genomic Analysis Reveals Widespread Enhancer Regulation by p53 in Response to DNA Damage 16.3
Epigenetic mechanisms underlie the crosstalk between growth factors and a steroid hormone 16.3
Epigenetic mechanisms underlie the crosstalk between growth factors and a steroid hormone [IMR90_MCF7_RNA-Seq] 16.3
Dissection of estrogen receptor alpha signaling pathways in osteoblasts using RNA-sequencing 15.91
High throughput analysis of three human adipose cell lines PAZ6, SGBS and SW872 15.82
Generation of trichogenic adipose-derived stem cells by expression of three factors 15.68
RNA-seq data from human SGBS adipocytes differentiated with marine oxohexadecenoic acids 15.32
Gene Expression Profiling of SPOP Knocked Down Cell 15.18
Transcriptome-wide analysis of the role of HTLV-1 Tax PBM in T-Cells from infected humanized-mice (hu-Mice) 14.91
A pooled single-cell genetic screen identifies regulatory barriers in the continuum of the epithelial-to-mesenchymal transition 14.88
Next-generation sequencing analysis of transcriptom in gemcitabine resistant pancreatic cancer cells 14.71
Identifying lincRNA as prognostic biomarker for clear cell renal cell carcinoma 14.5
Understanding the Mechanistic Contribution of Herbal Extracts in Compound Kushen Injection with Transcriptome Analysis 14.47
Regulation of highly expressed hCINAP on translatome 14.43
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition [RNA-Seq] 14.42
Selective modulation of inflammatory Natural Killer (NK) cell phenotypes following histone H3K27 demethylase inhibition 14.42
RNA-seq analysis of Retinoic Acid and Non-treated Control hiPSCs 14.41
Ectoderm specification of H1 human embryonic stem cells 14.4
Alu RNA modulates the expression of cell cycle genes in human fibroblasts 14.04
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 13.99
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [BAA] 13.9
Selective Inhibition of the Second Bromodomain of BET Family Maintains Anti-Tumor Efficacy and Improves Tolerability (22RV1 RNA-seq) 13.54
Selective Inhibition of the Second Bromodomain of BET Family Maintains Anti-Tumor Efficacy and Improves Tolerability 13.54
RNAseq analysis of the human neutrophil transcriptome, with and without in vitro cytokine stimulation 13.45
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (mRNA-Seq) 13.44
STVI-120 Induction of differentiation in human epidermal stem cells followed by differential splicing analysis 13.15
Hydrogel scaffolds promote neural gene expression and structural reorganization in human astrocyte cultures 12.85
Universal alternative splicing of noncoding exons 12.85
Global transcriptomic analyses of bronchial epithelial cells exposed to 5 ng/mL TGF-β1 and 10 nM Estrogen individually and in combination 12.69
Transcriptome analysis of AGS cells infected with Helicobacter pylori P12 12.57
Loss of ANCO1 repression of AIB1/YAP drives breast cancer progression 12.51
RNA-seq of cells with TET1 knockout 12.12
Differential analysis of gene regulation at transcript resolution by RNA-Seq 12.08
Differential analysis of HOXA1 in adult cells at isoform resolution by RNA-Seq [Illumina] 12.08
A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (RNA-seq) 12.02
A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia 12.02
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of H1 and H1 after SNAI1 deletion at Day2 after human early hematopoietic differentiation . 11.95
Heterogeneous maintenance of human tissue resident memory T cells based on efflux capacities 11.82
Transcriptomic profile of human embryonic renal corpuscles 11.78
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [Toxin] 11.72
Transcriptional repression in hypoxia is mediated by the Sin3A histone deacetylase complex [RNA-seq] 11.67
Dermal fibroblasts play a central role in skin model protection against C. albicans invasion 11.41
Identification and Initial Functional Characterization of SENCR, a Long Non-Coding RNA Enriched in Human Vascular Cells 11.36
Irf9 function in immunity in mouse 11.12
Transcription profile analysis of wild type and Irf9-/- human monocytic THP1 cells in response to type I interferons 11.12
Genome-wide identification of cancer-specific alternative splicing in circRNA 11.09
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia revealed by RNA-sequencing. 11.03
Vitamin d receptor-mediated stromal reprogramming suppresses pancreatitis and enhances pancreatic cancer therapy 11.01
Mining the stiffness-sensitive transcriptome in human vascular smooth muscle cells identifies long non-coding RNA stiffness regulators 11.0
Comparing effects of perfusion and hydrostatic pressure on human chondrocytes using gene profiles 10.87
ASCL1 mediates neuronal differentiation of primary GBM stem cell cultures upon Notch signalling blockade [RNA-seq] 10.86
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 10.77
Single-nucleotide-resolution mapping of HBV promoters using CAGE 10.76
Transcriptome of invasive mucinous adnocarcinoma of the lung and adjacent normal lung tissues from 6 patients based on RNA-seq method 10.71
Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis 10.52
Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis [RNA-Seq] 10.52
Next Generation Sequencing of human SMA and healthy control Motor Neurons 10.41
MicroRNA targetome analysis during HCMV infection 10.27
Bone marrow-derived and dental pulp-derived human mesenchymal stem cell RNA-Seq 10.25
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo 10.25
Homolog-selective degradation as a strategy to probe the function of CDK6 in AML 10.21
Total RNA deep sequencing (ribosomal depleted) of human umbilical vein endothelial cells exposed to hypoxia (0.2%) for 12h and 24h or kept under normoxic conditions. 10.15
Endothelial gene expression analysis 10.15
Epigenomic profiling reveals the key function of histone H3K9 methylation during tumor transformation process 10.13
Epigenome regulation during epidermal lineage commitment [ATAC-seq, RNA-seq] 10.07
ZMYND8 reads the dual histone mark H3K4me1-H3K14ac to antagonize the expression of metastasis-linked genes 9.95
Interphase condensins regulate ligand-depedent enhancer activation 9.82
Interphase condensins regulate ligand-depedent enhancer activation (GRO-seq) 9.82
Glioblastoma stem cells infected by ZIKA virus 9.8
Global gene expression profiles of cardiac progenitors differentiated from human pluripotent stem cells in 3D culture under simulated microgravity 9.77
RNA-sequencing of mRNAs from control and CAP-D3 deficient Salmonella infected HT-29 cells 9.77
Total RNA-seq in ALL-SIL upon JQ1 inhibition 9.71
Transcription control by the ENL YEATS domain in acute leukemia 9.6
Transcription control by the ENL YEATS domain in acute leukemia [RNA-seq] 9.6
SIRT6 regulates redox homeostasis in human mesenchymal stem cells by the transactivation of NRF2 9.59
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 9.58
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq] 9.53
Transcriptome profiling of microRNA-mediated neuronal reprogramming with REST repression at day 7 9.43
Modeling Familial Cancer with iPSC Approaches 9.38
Expression analysis of Mebendazole treated THP-1 cells in three paired samples 9.37
RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21 9.28
RNA-sequencing of bulk CD19+ Thymic B cells from young (3 month - 4 year) and old (42 - 61 years) humans 9.28
RNA-sequencing of bulk CD19+ Thymic B cells from mice and humans 9.28
Analysis of the polyA+ RNA of LPS-treated human CD14+ monocytes 9.25
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 9.19
Gene expression profiling of iPSC-derived cardiomyocytes with BAG3 mutations 9.17
Differential RNA-seq analysis comparing APC-defective and APC-restored SW480 colorectal cancer cells 9.16
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 9.12
Differentially expressed (DE) genes analysis in synovial fluid mesenchymal stem cells (SF-MSCs), SF-MSC derived iPSCs and iPSC derived MSCs (iPSC-MSCs) 9.07
Activating PAX Gene Family Paralogs to Complement PAX5 Leukemia Driver Mutations 9.01
Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity 8.96
Inhibition of TNBC metastasis by Gpx1 8.85
hiPSCs unravel aberrant TGFβ signaling as an etiology of left ventricular non-compaction 8.85
circRNA-sequencing 8.84
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition 8.81
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] 8.81
Transcriptome profiling of influenza virus-infected human bronchial epithelial cells 8.76
Hit-and-run epigenetic editing prevents senescence entry in primary breast cells from healthy donors 8.72
Hit-and-run epigenetic editing prevents senescence entry in primary breast cells from healthy donors [RNA-seq] 8.72
Tissue-resident memory T cells mediate immune homeostasis in the human pancreas through the PD-1/PD-L1 pathway 8.7
Human RELA haploinsufficiency results in autosomal dominant chronic mucocutaneous ulceration: the transcriptional profile of RelA haploinsufficient patients 8.69
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 8.69
The histone variant H3.3 G34W substitution in giant cell tumor of the bone link chromatin and RNA processing [RNA-seq] 8.66
Gene expression signatures of innate lymphoid cells from human blood 8.58
A transcriptional regulatory network connects mitochondrial biogenesis and metabolic shift with stem cell commitment to hepatic differentiation 8.58
RNA-Seq and ATAC-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation 8.57
RNA-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation 8.57
8.56
Integrative analysis of mRNA and lncRNA profiles identified pathogenetic lncRNAs in esophageal squamous cell carcinoma 8.48
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells 8.42
Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [RNA-seq] 8.42
IL-1β induces the rapid secretion of the antimicrobial protein IL-26 from Th17 cells 8.32
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] 8.31
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [RNA-Seq2] 8.3
The identification of RBM47 binding sites and RBM47-dependent alternative splicing events in brain metastatic breast cancer cells 8.28
Identification of alternatively spliced transcripts in brain metastatic derivatives of MDA-MB-231 breast cancer cells in response to RBM47 expression 8.28
Neonatal and adult human testis defined at the single-cell level 8.22
The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas 8.16
X-Ray induced DNA-Hydroxymethylation changes 8.11
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia 8.09
ncRNA (non-coding RNA) signature in endothelial cells during hypoxia [RNA-seq] 8.09
Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function 8.07
FGF2 induces migration of human bone marrow stromal cells by increasing core-fucosylations on N-glycans of integrins 8.05
UPA-Seq: Prediction of functional lncRNAs using the sensitivities to UV-crosslinking 8.04
Splicing and epigenetic factors jointly regulate epidermal differentiation 7.99
Transcriptome profiling of HepG2 cells upon treatment of the menin-MLL inhibitor MI-503 or DMSO 7.95
Unraveling cis-regulatory elements by mapping structural changes in mRNAs 7.92
APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa 7.9
RNA-seq analysis of hPSC-derived brain pericyte-like cells, hPSC-derived neural crest stem cells, and primary human brain pericytes 7.89
The impact of stanniocalcin 1 on the transcriptome of human cord blood stem/progenitors 7.87
Identification of ZEB1-regulated gene expression changes in HCC827 human lung adenocarcinoma cells 7.85
Androgen receptor functions as transcriptional repressor of Cancer Associated Fibroblast (CAF) activation 7.85
Androgen receptor functions as transcriptional repressor of Cancer Associated Fibroblast (CAF) activation [RNA-seq] 7.85
Transcriptome analysis of virus infected tissues 7.82
Selective Inhibition of the Second Bromodomain of BET Family Maintains Anti-Tumor Efficacy and Improves Tolerability (LNCaP RNA-seq) 7.8
Human iPSC derived glomeruli facilitate accurate modelling of podocytopathy 7.61
miRNA-1343 attenuates pathways of fibrosis by targeting the TGF-beta receptors [RNA-seq] 7.58
Nuclear Actin Regulates Inducible Transcription by Enhancing RNA Polymerase II Clustering 7.56
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) 7.5
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation 7.5
The inhibitory effect of TIAM1 on TAZ transcriptional activity and TIAM1 differentially expressed genes 7.48
List of TIAM1 differentially expressed genes in SW620 cells [RNA-seq] 7.48
Coordination of neuron production in mouse and human cerebral cortex by the homolog of Drosophila Mastermind protein 7.43
Gene expression changes in THP1 cells at day 2 and 4 following shRNA knock-down of RUVBL2 7.37
RNA deep sequencing analysis of human brain microvascular endothelial cells (ECs) treated with glioma-conditioned medium (glioma-CM) 7.32
Global Transcriptome Analysis and Enhancer Landscape of Human Primary T Follicular Helper and T Effector Lymphocytes 7.31
Global Transcriptome Analysis and Enhancer Landscape of Human Primary T Follicular Helper and T Effector Lymphocytes (RNA-Seq) 7.31
scRNASeq analysis of cycling cardiomyocytes 7.23
Evolved Labels of Placental Invasion in Human and Bovine Endometrial Stroma 7.23
Telomere-Dependent and Telomere-Independent Roles of RAP1 in Regulating Human Stem Cell Homeostasis 7.22
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 7.22
RNA-seq analysis of AML cells in response to ASLAN003 7.19
RNA-seq analysis of the human fetal kidney. 7.18
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection 7.14
Immunological Imbalance in Fibrodysplasia Ossificans Progressiva Revealed by PBMC Transcriptome Analysis 7.14
IRF2 is a master regulator of human keratinocyte stem cell fate 7.14
IRF2 is a master regulator of human keratinocyte stem cell fate [RNA-seq] 7.14
RNA-seq of healthy CD34+ HSPCs after co-culture with myelodyplastic syndrome patient-derived mesenchymal stromal cells 7.12
The Role of Histone H3 Lysine 36 Methylation in Reprogramming of fibroblasts and on Induced Pluripotent stem Cell Generation 7.1
RNA-Sequencing of HepG2 cells treated with TGFBeta 7.07
mRNA Sequencing of Human PromoCells Using Random Primed mRNA-Sequencing Technique 6.92
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression 6.9
mRNA expression data from human parthenogenetic haploid ESCs (hPGES), normal ESCs (H9) and human fibroblast 6.88
Genomic analysis of human parthenogenetic haploid ESCs (hPGES), normal human ESCs(H9) and human forskin fibroblast 6.88
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing 6.85
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing [RNA-Seq] 6.85
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets (RNA-seq B-ALL) 6.83
Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 6.77
Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 6.77
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 6.77
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 6.77
Transcriptomes analysis for the regulation of Z36 induced autophagy in HeLa cell death 6.74
Tpl-2 and MEK small molecule inhibitors 6.68
Tpl-2 small molecule project 6.68
Coding mutations and loss-of-imprinting in human pluripotent cells derived by nuclear transfer and defined factors 6.63
Coding mutations and loss-of-imprinting in human pluripotent cells derived by nuclear transfer and defined factors [RNA-Seq] 6.63
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 6.62
RNA-seq analysis of BAP1-depleted uveal melanoma cells 6.61
NR2F2 study 6.61
Estrogen response in breast cancer cell line MCF-7 is dependent on NR2F2 [RNA-seq] 6.61
Nuclear Parkin Regulates Transcriptional Response during Hypoxia 6.59
Next Generation Sequencing Facilitates Quantitative Analysis of mesoderm posterior bHLH transcription factor 1(MESP1)+ and MESP1- cells' Transcriptomes 6.59
A transcriptome dataset revealing the molecular features of breast cancer stem cells 6.55
Expression level comparison under dividing and quiescent states in human primary fibroblasts 6.55
Gene expression profile of regenerated CD8αα T cells and CD8αβ T cells from LMP2 T-iPSCs 6.54
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response 6.5
Transcriptional profiles of normal human mature B cells 6.48
Simultaneous quantification of antibody-RNA conjugates and the transcriptome from fixed cells by RAID 6.47
Transcriptomic profiling of mesenchymal stem cells (MSC) differentiation into mesangial cells 6.42
Gene expression data from IMR90 control, IMR90 shRRM2 and shRRM2/shp16 6.41
Human iPSC-based Modeling of Late-Onset Disease using Progerin-induced Aging 6.41
Knock-down of Ror1 in MDA-MB-231 cell line decreases cell invasiveness 6.39
TGFβ-induced fibroblast activation requires persistent and targeted HDAC-mediated gene repression 6.36
Patterned human microvascular grafts enable rapid vascularization and increase perfusion in infarcted hearts 6.34
snRNAs as regulators of alternative splicing 6.34
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery 6.33
Arginine methylation controls cell proliferation by integrating E2F activity with the splicing machinery (RNA-seq data set) 6.33
Characterization of human ILC2 subsets 6.32
Integrated Systems Biology Analysis of KSHV Latent Infection Reveals Viral Induction and Reliance on Peroxisome Mediated Lipid Metabolism 6.31
Identification and validation of differentially expressed transcripts by RNA-Sequencing of formalin-fixed, paraffin-embedded (FFPE) lung tissue from patients with Idiopathic Pulmonary Fibrosis 6.3
Osteogenic programming of adipose-derived mesenchymal stem cells using a fungal metabolite that suppresses the Polycomb protein EZH2 6.3
POU2AF1 Functions in the Human Airway Epithelium to Regulate Expression of Host Defense Genes [RNA-Seq] 6.28
POU2AF1 Functions in the Human Airway Epithelium to Regulate Expression of Host Defense Genes 6.28
Transcriptomic insights into human decidual and peripheral blood CD8 T cells 6.27
RNAseq to determine gene expression changes following depletion of SETDB1 in THP-1 AML Cells 6.25
polyA RNA Sequencing Analysis of HTR-8/SVneo cells after lnc-SLC4A1-1 overexpression 6.23
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 6.23
GATA3 enhances the neurogenic potential of primary human astrocytes after traumatic injury [exp1] 6.21
Genome wide mapping of long noncoding (lnc) RNAs in hepatic stellate cells 6.17
Transcription factors OVOL1 and OVOL2 induce the mesenchymal to epithelial transition in human cancer 6.16
Illumina sequencing of vaginal epithelial cells from women using depot medroxyprogesterone acetate or non-hormonal contraception 6.16
RNAseq of IL-36 stimulated primary human keratinocytes 6.15
mRNAseq of Huntington's disease and control patient iPSC-derived brain microvascular endothelial cells 6.15
CSL 6.15
CSL RNA-Seq on HKC and SCC cell lines 6.15
RNAseq to determine whether bidirectional transcription occurs over transposable elements following depletion of SETDB1 in THP-1 AML Cells 6.1
Characterization and therapeautic application of mesenchymal stem cells with neuromesodermal origin from human pluripotent stem cells 6.09
Global Gene Expression Changes in Cholangiocytes Treated with TGF-beta 6.09
ATRX is necessary for cellular senescence and represses HRAS to drive cells from quiescence into senescence 6.05
ATRX is necessary for cellular senescence and represses HRAS to drive cells from quiescence into senescence [RNA-Seq] 6.05
Endometrial epithelial cell transcriptome response to co-culture with adipose stromal cells 6.02
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells 5.97
The conserved transcriptional landscapes in human spermatogenesis 5.97
RNA sequencing reveals transcriptional changes after Hippo signaling activation in podocytes 5.96
Transcriptional differences between skin from patients with atopic dermatitis and control skin obtained from the healthy margins of Mohs surgery patients 5.96
RNA-seq of human iPS derived macrophages with or without KLF1- transcription factor Activation 5.92
circRNA profile in hypopharyngeal cancer 5.87
Human iPSC-derived glomeruli provide an advanced model to interrogate podocyte biology and accurately recapitulate podocytopathy 5.87
Genome-wide Analysis of Human Constitutive Androstane Receptor (CAR) Transcriptome in Wild-type and CAR-knockout HepaRG cells 5.77
Prolyl hydroxylation regulates protein degradation, synthesis, and splicing in human induced pluripotent stem cell-derived cardiomyocytes 5.74
Genome-wide CRISPR-Cas9 screen identifies SLC1A3 as a key contributor to L-asparaginase Resistance in Solid tumors 5.72
Transcriptome analysis of the HepG2 cells expressing hepatic transcription factors 5.7
Convergent exaptation of Alu and B/ID SINEs for Staufen-mediated mRNA decay 5.62
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 5.61
Recovery and analysis of nascent RNA 5.54
The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains 5.54
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 5.48
Improved post thaw function and genetic changes for mesenchymal stromal cells cryopreserved using multicomponent osmolyte solutions 5.46
Spatially Constrained Tandem Bromodomain Inhibition Bolsters Sustained Repression of BRD4 Transcriptional Activity for TNBC Cell Growth 5.44
Transcriptomic analysis of senescent cells upon PTBP1 knockdown. 5.42
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 5.42
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 5.42
Identifying a novel candidate diagnostic and prognostic biomarker SPRR3 for oral squamous cell carcinoma via mRNA Sequencing and Bioinformatics 5.41
Detailed genomic and molecular characterization of Indian induced pluripotent stem cell lines 5.36
RNA-seq analysis of human KMT2A rearranged MV4;11 AML cell line treated with DOT1L and/or EZH2 inhibitor 5.36
Human lymph nodes maintain a unique subset of resident memory T cells with high functional potential important for protective immunity and immunotherapies 5.34
Transcriptome Profiling of Human Primary Monocytes 5.34
Epigenetic activation and memory at a TGFB2 enhancer in systemic sclerosis 5.25
Transcriptome analyses of human pancreatic islets and pseudoislets 5.22
The cohesin complex prevents Myc-induced replication stress 5.21
RNA sequencing of CACO-2 cells incubated with bifidobacteria grown on human milk oligosaccharides. 5.16
Transcriptomic analysis of cultured corneal endothelial cells as a validation for their use in cell-replacement therapy 5.16
Perivascular signals alter global genomic profile of glioblastoma and response to temozolomide in a gelatin hydrogel 5.13
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 5.04
Epidermal growth factor activates β-catenin via integrin-linked kinase to control proliferation of mesenchymal stromal cells. 5.0
SAMHD1 is recurrently mutated in T-cell prolymphocytic leukemia [RNA-seq] 4.9
Stem cell and neurogenic gene-expression profiles link prostate basal cells to aggressive prostate cancer 4.89
IRF1 regulates IFN dependent and independent gene expression 4.87
RNA-sequencing of human mammary epithelial cells (HMLEs) transduced in vitro with a shRNA against SOX4 or a scrambled shRNA in untreated and TGF-β-treated (16 hours) conditions 4.83
Gene expression profiling of human iPS cell-derived podocytes and sorted human adult podocytes 4.81
Conserved roles for murine mDUX and human DUX4 in activating cleavage stage genes and MERVL/HERVL retrotransposons [RNA-Seq] 4.76
Differential gene expression of static and intermittent compressive force treated human periodontal ligament cells 4.73
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells (Poly(I:C) and LPS) 4.67
Identification of the O-GlcNAc-regulated alternative splicing events by performing RNA sequencing on HeLa cells with altered O-GlcNAc level. 4.65
Microsatellite expansion RNA visualization, elimination, and reversal of molecular pathology by RNA-targeting Cas9 4.64
BACH2 in human plasma cell fate decision 4.63
Differential gene expression analysis between proliferating and quiescent human dermal fibroblasts 4.61
Acquired resistance to MEK-CDK4/6 inhibitor combinations in cutaneous melanoma 4.59
Cranial pericytes derived from neural crest cells reveal an inherent cell type-specific defect in Alzheimer's Disease 4.54
Microenvironmental-derived Regulation of HIF-Signaling Drives Transcriptional Heterogeneity in Glioblastoma Multiforme 4.5
Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF 4.49
IFN-γ Represses M2 Gene Expression in Human Macrophages by Suppressing and Disassembling MAF-binding Enhancers [RNA-seq] 4.49
Genome-Wide Transcriptional Regulation Mediated By Biochemically Distinct Forms of SWI/SNF 4.46
Combinatorial Regulation Mediated by Biochemically Distinct Forms of SWI/SNF [RNA-Seq] 4.46
Blocking expression of inhibitory receptor NKG2A overcomes tumor resistance to NK cells 4.44
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 4.41
High-efficiency RNA-based reprogramming of human primary fibroblasts 4.33
Gene activation precedes DNA demethylation in response to infection in human dendritic cells 4.33
Gene activation precedes DNA demethylation in response to infection in human dendritic cells 4.33
RNA-seq analysis of uveal melanoma cells treated with FR900359 4.32
Expression profiling of converted and control dermal BJ fibroblasts 4.25
p63 establishes epithelial enhancers de novo at critical craniofacial development genes 4.25
Comparative analysis of mesenchymal stem cells derived from amniotic membrane, umbilical cord and chorionic plate under serum-free condition 4.22
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 4.22
ETS1 is a genome-wide effector of RAS/ERK signaling in epithelial cells (RNA-Seq) 4.21
ETS1 is a genome-wide effector of RAS/ERK signaling in epithelial cells 4.21
RNA-Seq of PRMT1 overexpression ECA109 cells 4.15
Early transcriptome profiling of microRNA-mediated neuronal reprogramming [RNA-seq timecourse] 4.1
RNA-Seq of CD4+ T cells treated with AS1842856 or DMSO 4.04
Analysis of transcriptional regulation by Myt1 and Myt1l 4.01
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 3.98
RNA sequencing of mechanically strained NHEKs and control NHEKs 3.94
Identification and characterization of circular RNAs as a new class of putative biomarkers in human blood 3.94
Transcriptome analysis of human lung epithelial cells 3.93
RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood 3.93
A Novel Population of Human Cardiac Resident Mesenchymal Stem Cells 3.9
mRNA expression profile of Lymphocytes by high-throuput sequencing 3.89
Endothelial TGFb signaling drives vascular inflammation and atherosclerosis 3.89
Endothelial TGFb signaling drives vascular inflammation and atherosclerosis [bulk RNA-Seq] 3.89
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells 3.84
Transcriptomic analysis of senescent cells upon PTBP1 knockdown and EXOC7 knockdown 3.83
Epigenome regulation during epidermal lineage commitment [RNA-seq] 3.81
RNA-seq characterization of downstream effects of upregulating SMN2 via down-regulating PRC2 or blocking the PRC2:SMN-AS1 interaction with a mixmer oligonucleotide 3.78
RNA-sequencing of healthy human skeletal myocytes 3.75
Novel Transcriptional Activity and Extensive Allelic Imbalance in the Human MHC Region 3.7
Genome-wide expression analysis of human hTert immortalized fibroblasts after donwregulation of MCM7 3.69
Transcriptome of activated human and mouse MAIT cells 3.68
p53 activity results in DNA replication fork processivity 3.67
Xeno-free and Chemically Defined Human System for Culturing Human Epidermal Keratinocytes 3.62
DLX3-dependent p53 signaling network controls keratinocyte cell cycle and squamous tumor growth 3.62
DLX3 alters transcriptomic profile of adhesion, cell cycle, and cell death in Squamous Cell Carcinoma Cells 3.62
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 3.62
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 3.62
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and SMAD4 Y95 Mutation Transcriptomes 3.6
Neutrophils in systemic onset Juvenile Idiopathic Arthritis display sepsis-like features which can be reverted by IL-1 blockade 3.55
Targeting Chromatin Regulators Inhibits Leukemogenic Gene Expression in NPM1 Mutant Leukemia 3.54
Profiling of protrusion-enriched RNAs from human breast cancer cell line MDA-MB-231 3.48
Hydroxychloroquine inhibits responses to group A streptococcus in peripheral blood mononuclear cells 3.47
CHD1 regulates cell fate determination by activation of differentiation-induced genes 3.47
Mutational landscape of splicing genes and functional consequences across 33 cancer types 3.45
Acetylation of spliceosome protein PHF5A modulates stress responses and colorectal carcinogenesis through alternative splicing mediated upregulation of KDM3A 3.44
Aneuploidy-induced cellular stresses limit autophagic degradation. 3.43
Azithromycin induces epidermal differentiation and multivesicular bodies in airway epithelia 3.41
Targeted reactivation of FMR1 transcription in FXS embryonic stem cells 3.4
Hypoxic regulation of gene expression in HUVEC is dominated by EPAS1 3.38
Necroptosis inhibition protects from dopaminergic neuronal cell death in OPA1 mutant Parkinson’s disease patient neurons and MPTP treated mice 3.36
PER2 synchronizes mitotic expansion and decidual transformation of human endometrial stromal cells 3.33
BBBomics - Human Blood Brain Barrier Transcriptomics Hub 3.23
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] 3.23
Ets homologous factor has critical roles in epithelial dysfunction in airway disease 3.22
Ets homologous factor has critical roles in epithelial dysfunction in airway disease [RNA-seq] 3.22
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence 3.21
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence [RNA-seq] 3.21
Exploring ILF2 regulatory genes by next-generation sequencing 3.16
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos 3.14
Prostaglandin E2 inhibits pro-fibrotic function of human pulmonary fibroblasts by disrupting Ca2+-signaling 3.14
Next Generation Sequencing for Quantitative Analysis of transcriptome of follicular compared to non-follicular CD8 T cells from HIV+ Lymph nodes 3.1
Circular RNA expression signature of low-glucose-treated MIA PaCa-2 cells 3.06
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 3.03
Smoking Dysregulates the Human Airway Basal Cell Transcriptome at COPD-linked Risk Locus 19q13.2 3.02
Role of OSGIN1 in Mediating Smoking-induced Autophagy in the Human Airway Epithelium [RNA-Seq] 3.02
Role of OSGIN1 in Mediating Smoking-induced Autophagy in the Human Airway Epithelium 3.02
Human ES Cell-derived Hepatoblasts are an Optimal Lineage Stage for HCV Infection 3.01
Lentiviral CRISPR Epigenome Editing of Inflammatory Receptors as a Gene Therapy Strategy for Disc Degeneration 2.97
The flightless I protein is involved in the genome-wide mRNA post-transcriptional regulation in lung carcinoma cells 2.93
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 2.9
Single-Cell RNA Sequencing Reveals Metallothionein Heterogeneity during hESC Differentiation to Definitive Endoderm [RNA-Seq] 2.88
mRNA differential expression analysis in a human ex vivo model of chronic wounds 2.83
RNA-seq of exosomes identifies lncRNA profiles that distinguish early-stage esophageal squamous cell carcinoma (ESCC) from non-malignant esophagitis 2.8
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 2.76
DRB/GRO-Seq -/+ UV 2.75
Identification of atheroprone shear stress responsive regulatory elements in endothelial cells 2.72
Neurotrophic Tyrosine Kinase Receptor 1 is Epigenetically Regulated by IL-13 and Contributes to Allergic Inflammation 2.69
RNA-sequencing with micro-dissected boundary organoid into anterior, posterior, and boundary regions 2.63
Deep sequencing of transcript levels of human embryonic stem cell derived mesothelium (epithelial and mesenchymal forms) and mesothelium from neonatal mouse E15.5 of the heart, lung, liver and gut and ChIP-seq data of the mesenchymal form of mesothelium 2.61
MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells 2.59
Transcriptome Sequencing of Adipose-Derived Mesechymal Stromal Cells 2.58
CT Irradiation Induced Changes of Gene Expression within Peripheral Blood Cells 2.53
Single-cell RNA-seq reveals novel cell differentiation dynamics during human airway epithelium regeneration 2.47
RNA-Seq analysis of human neutrophils isolated by different protocols (Polymorphprep and negative selection) and incubated with and without in vitro cytokine stimulation 2.43
Mesenchymal stem/stromal cell engulfment reveals metastatic advantage in breast cancer 2.39
Integration of kinase and calcium signaling at the level of chromatin underlines inducible gene activation in T cells 2.39
c-Jun promotes cell migration and drives expression of the motility factor ENPP2 in soft tissue sarcomas 2.38
c-Jun promotes cell migration and drives expression of the motility factor ENPP2 in soft tissue sarcomas [RNA-Seq] 2.38
RNA-Sequencing data of Varicella Zoster Virus (VZV)-infected human dermal fibroblasts (HDF) 2.32
Zoledronic acid inhibits NFAT and IL-2 signaling pathways in regulatory T cells and diminishes their suppressive function in patients with metastatic cancer 2.28
H1609088 Human RNA-Sequencing 2.26
Long noncoding RNA signatures induced by TLR7 and type I IFN signaling in activated human plasmacytoid dendritic cells 2.22
RNASeq of 4SU labelled nascent RNA in MV4;11 cell treated with DMSO, I-BET, SGC0946 and combination of I-BET and SGC0946 2.19
PolyA+ RNA-seq in ALL-SIL upon TLX1 knockdown 2.17
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 2.14
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export 2.13
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription 2.09
Metabolism as an early predictor of DPSCs aging 2.04
RNAseq of quiescent (Q) and stress induced premature senescent (SIPS) fibroblasts treated with plant extract (1201) from Solidago vigaurea subspecies alpestris 2.02
Systems-level analyses reveal a convergent pathway for progression of diffuse astrocytoma and potential role for resveratrol in delaying high-grade transformation 2.01
SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES 2.0
SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES [RNA-seq] 2.0
Transcriptome changes due to nuclear penetration of cancer extracellular vesicles 2.0
HEK293 Heat-shock experiment 1.97
A high-throughput screening strategy identifies regulators of alternative splicing via interaction with RNA G-quadruplexes 1.96
Analysis of the senescent transcriptome upon expression of a ZFP36L1 phosphomutant 1.91
RNA-seq study reveals unique transcriptome expression in systemic lupus erythematosus patients with distinct autoantibody profile 1.88
RNA sequencing for human induced pluripotent stem cell cardiomyocyte differentiation 1.84
Deep RNA sequencing of the human placental transcriptome 1.82
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 1.82
Next-generation RNA sequencing to determine changes in gene expression during breast cancer progression 1.76
RNA-sequencing transcriptome profiling of normal human keratinocytes differentiation 1.71
The Regulation of IFN Type I Pathway Related Genes RSAD2 and ETV7 Specifically Indicate Antibody-Mediated Rejection After Kidney Transplantation 1.7
Identification of a Cell-of-Origin for Fibroblasts Comprising the Fibrotic Reticulum in Idiopathic Pulmonary Fibrosis 1.69
Pre-clinical evaluation of cysteamine bitartrate as a therapeutic agent for mitochondrial respiratory chain disease (human) 1.69
Genome-wide MAF1-dependent regulation of RNA polymerase III transcription 1.67
Genome-wide MAF1-dependent regulation of RNA polymerase III transcription [RNA-Seq] 1.67
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 1.65
CDK4/6 inhibitors target SMARCA4-determined cyclin D1 deficiency in hypercalcemic small cell carcinoma of the ovary (I) 1.65
Positively selected enhancer elements endow tumor cells with metastatic competence 1.64
Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome 1.61
C/EBPα overexpression overrides epigenetic reprogramming by RUNX1-ETO and RUNX1-EVI1 [RNA-seq] 1.52
C/EBPα overexpression overrides epigenetic reprogramming by RUNX1-ETO and RUNX1-EVI1 1.52
Human Induced Pluripotent Stem Cells Recapitulate Breast Cancer Patients’ Predilection to Doxorubicin-Induced Cardiotoxicity 1.45
Copper Regulation of HIF-1 Transcription Activity [RNA-seq] 1.45
Copper Regulation of HIF-1 Transcription Activity 1.45
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV] 1.38
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 1.33
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 1.33
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes 1.32
RNA-seq of human foreskin fibroblast cells lacking RB, p130, and p107 treated with doxorubicin. 1.24
Global transcriptome analysis in the MYCN-amplified neuroblastoma cell line IMR5-75 upon inducible MYCN-knockdown 1.24
Single Cell Sequencing Reveals Gene Expression Signatures Associated with Bone Marrow Stromal Cell Subpopulations and Time in Culture [NGS_bulk cell RNA-seq] 1.21
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas 1.19
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq] 1.19
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 1.18
Myeloid-derived suppressor cells facilitie invasion and metastasis of papillary thyroid cancer cells by repressing miR-486-3p 1.14
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites (RNA-seq) 1.11
Replicative senescence is associated with nuclear reorganization and DNA methylation at specific transcription factor binding sites 1.11
miRNAs affected by antagomiR-17 treatment 1.09
Interleukin-1β induces mitochondrial DAMP production to activate STING-dependent innate immune programs 1.04
Generating Patterned Kidney Organoids for Studying Development and Diseases [bulk RNA-Seq] 1.02
Mutant p63 disrupts the key specification switch from the multipotent cell state to stratified epithelia during epithelial differentiation/in ectodermal dysplasia disorders 1.0
Effect of ILF3 on translation during homeostasis and the antiviral response 0.99
RNA editing in nascent RNA affects pre-mRNA splicing 0.92
Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma 0.92
Oncogenic roles of ARID5B in T-ALL 0.9
RNA-seq analysis in knockdown Jurkat samples for each factor of TAL1 complex 0.9
Subcellular pathways shared by afflicted patients and mutant mice identify a new drug treatment for aortic aneurysm in Marfan syndrome 0.88
Gene expression patterns define the hepatocyte-like cells derived by different strategies 0.87
Gene expression patterns define the hepatocyte-like cells derived by different strategies [RNA-seq] 0.87
Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue 0.82
Time series total RNA sequencing of a differentiation of human embryonic stem cells towards trophoblast lineage 0.81
Next Generation Sequencing of Lung Primary Fibroblast Responding to Eosinophil-Degranulation Products 0.81
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 0.8
Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training 0.8
Effects of a nutritional supplement in older individuals subject to ten days of complete bed rest. 0.78
Re-Wiring 3D Nuclear Architecture by a Single Transcription Factor during Somatic Cell Reprogramming 0.74
Expression changes in MAPKi resistant M229 melanoma lines co-cultured with PD-1 overexpressing HEK293T cells [CellLine.FPKM.batch5] 0.69
Convergent roles of ATF3 and CSL in chromatin control of CAF activation 0.62
Convergent roles of ATF3 and CSL in chromatin control of CAF activation [RNA-seq] 0.62
Maturing an Enteric Nervous System in Human Intestinal Organoid-derived Tissue-Engineered Small Intestine 0.6
4sUDRB-seq: measuring transcription elongation and initiation genomewide 0.59
IL-10 dysregulation in acute mountain sickness revealed by transcriptome analysis 0.58
Aberrant splicing in B-cell acute lymphoblastic leukemia [B-ALL] 0.56
Mesothelioma xenografts in nude mice: PBS treated versus pirfenidone treated 0.56
Histone H3.1K27 methylation promotes NHEJ by antagonizing FANCD2 on Chromatin 0.54
The global transcriptome analysis in the time course of hESC-derived cardiac differentiation 0.43
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells 0.42
Measure transcript integrity using RNA-seq data 0.42
Discovering human diabetes-risk gene function with genetics and physiological assays 0.4
CRISPR-Cas9 based screen for p53-bound enhancers that function in oncogene-induced senescence 0.4
Longitudinal transcriptome profiling of post-treatment Lyme disease syndrome 0.34
RNA-Seq analysis of NKX2.2 knockdown in human pancreatic islets 0.33
NKX2.2 0.33
Epigenome regulation during epidermal lineage commitment 0.3
Gene Expression Analysis of HUVEC Seeded rBEL Contructs at Low and High Phases of Glucose Consumption 0.29
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition [RNA-Seq] 0.29
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition. 0.29
RNA-Sequencing of HUVEC treated with Tie2 activating antibody 0.29
Transcriptomics-based drug repurposing approach identifies novel drugs against sorafenib-resistant hepatocellular carcinoma 0.27
The effect of insulin on mRNA transcription of human pluripotent stem cells 0.27
RNA-Seq of human induced pluripotent stem cell-derived cardiomyocytes from a cardiomyopathy patient and familial control 0.21
iPSC-Derived Cholangiocytes 0.21
Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [RNA-Seq1] 0.17
Sex-specific gene expression differences are evident in human embryonic stem cells and during in vitro differentiation of human placental progenitor cells 0.16
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 0.15
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 0.15
Genome-wide transcriptome analysis of organotypic rafts derived from human papillomavirus type 16 infected primary keratinocytes [3D raft] 0.14
Low-dose decitabine priming endows CAR T cells with enhanced and persistent anti-tumor potential by epigenetic reprogramming 0.09
Wnt1 silences CC/CXC motif chemokine genes in dendritic cells and induces adaptive immune resistance in lung adenocarcinoma 0.06
RNA sequencing and pathway analysis identify important pathways involved in hypertrichosis and intellectual disability in patients with Wiedemann-Steiner syndrome 0.05


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