Gene Query: RBX1

Dataset Description Geneva Score
Cleavage Factor Im as a key regulator of 3’ UTR length 27.32
Systematic discovery of endogenous human ribonucleoprotein complexes 21.2
RNA sequencing, chromatin accesibility and ChIP seq analysis of BAP1 -/- human liver organoids 19.94
Rorc disruption in human FG pancreatic cancer cells 16.62
Identification of transcription start sites for human A549 cell line using ReCappable-seq 16.4
Gene target specificity of the Super Elongation Complex (SEC) family: How HIV-1 Tat employs selected SEC members to activate viral transcription 16.07
Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods 15.62
RNAseq to determine whether bidirectional transcription occurs over transposable elements following depletion of SETDB1 in THP-1 AML Cells 15.14
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response 15.12
Unique features and clinical importance of acute alloreactive immune responses 15.0
ABCB5 is activated by MITF and b-catenin and is associated with melanoma differentiation 14.31
Comprehensive comparative analysis of 5’ end RNA sequencing methods 14.13
Global analysis of enhancer targets: Mosaic-seq 14.11
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 13.97
HNF1A deficiency impairs β-cell fate, granule maturation and function 13.36
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 13.33
High-throughput sequencing of PROMPT-enriched samples. 12.82
In vitro differentiation of human embryonic stem cells into ovarian follicle-like cells 12.68
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites 12.57
RNA sequencing based comparative analysis of human hepatic progenitor cells and their niche from alcoholic steatohepatitis livers 12.56
Gene expression changes caused by KRAS in MCF-10A 12.55
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation 12.49
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 12.42
RNAseq to determine gene expression changes following depletion of SETDB1 in THP-1 AML Cells 12.42
Pericyte-like cells generated from human pluripotent stem cells support hematopoietic stem and progenitors ex vivo 12.29
Poly(ADP-ribosyl)ation dependent changes in CTCF-chromatin binding and gene expression in breast cells 12.23
CROP-Seq in Primary Human T Cells 11.92
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique 11.85
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 11.82
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 11.72
Loss of histone macroH2A1 in hepatocellular carcinoma cells promotes paracrine-mediated chemoresistance and CD4+CD25+ T regulatory cells activation 11.69
Activation of HOTTIP lncRNA perturbs HSC function leading to AML like disease 11.67
CRISPR adenine and cytosine base editors with reduced RNA off-target activities 11.56
CRISPR adenine and cytosine base editors with reduced RNA off-target activities [CBE] 11.56
IFN-g Regulates mTORC1, Cellular Metabolism and mRNA Translation to Potentiate Inflammatory Macrophage Activation [RNA-Seq] 11.53
IFN-g Regulates mTORC1, Cellular Metabolism and mRNA Translation to Potentiate Inflammatory Macrophage Activation 11.53
The translation termination factor GSPT1 is a phenotypically relevant off-target of heterobifunctional phthalimide degraders 11.35
RNA-seq in transgenic cells 11.34
Co-transcriptional loading of RNA export factors shapes the human transcriptome 11.22
RNAseq of HEK293 cells after Chtop knockdown 11.22
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection 11.19
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 11.16
ELF4 is a target of miR-124 and promotes neuroblastoma proliferation and undifferentiated state 10.99
Global Regulation of Alternative Internal Exon Usage by mRNA 3' End Formation Factors [RNA-Seq] 10.95
Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors 10.95
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 10.91
Complete deconvolution of cellular mixtures based on linearity of transcriptional signatures 10.82
Polysome-associated mRNA profiling of cancer cells in response to CXCL12 and IGF1 10.79
Enhancement of Arterial Specification in Human Pluripotent Stem Cell Cultures Promotes Definitive Hematoendothelial Program with Broad Myelolymphoid Potential 10.5
Effects of NSUN2 deficiency on the mRNA 5-methylcytosine modification and gene expression profile in HEK293 cells (RNA-Seq) 10.04
Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells 9.83
EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq] 9.83
Activation of Wnt/beta-catenin in Ewing sarcoma cells antagonizes EWS/ETS function and promotes phenotypic transition to more metastatic cell states 9.59
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 9.51
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 9.46
Whole Transcriptome RNASeq Data for Cell-Sorted Antibody Secreting Cells (ASC) 9.45
Effect on small molecule RBPJ inhibitor (RIN1) on gene expression in Jurkat cells compared to gamma secretase inhibition and siRNA knockdown of RBPJ 9.45
DHX36 is the missing link to understand RNA G-quadruplex structures, mRNA stability, and translation [RNA-seq] 9.39
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) 9.34
Identification of monocyte-like precursors of granulocytes as a mechanism for accumulation of PMN-MDSC in cancer 9.3
DART-seq: an antibody-free method for global m6A detection 9.24
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 9.1
EWSR1 influences alternative splicing through direct and indirect mechanisms 9.09
Low carbohydrate diet study for non-alcoholic fatty liver disease patients 9.02
Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3 8.91
RNA-sequencing of healthy human skeletal myocytes 8.87
Gene expression profiling of human CD19+ B cells and EBV transformed lymphoblastoid cell lines (LCLs) 8.85
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes 8.74
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] 8.74
Biochemical fractionation of HEK293 nuclei and RNA-seq of chromatin-associated and soluble-nuclear RNA 8.63
Human CD4+CD103+ cutaneous resident memory T cells are found in the circulation of healthy subjects 8.59
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 8.58
Combined inhibition of STAT3 and DNA repair in palbociclib-resistant ER-positive breast cancer 8.58
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 8.52
Expression data for KDM1B knockdown in Glioma-Initiating Cells (GICs) 8.45
Transcription elongation factors are in vivo-specific cancer dependencies in glioma 8.39
RNA-seq Profiles in Transcription elongation factors are in vivo-specific cancer dependencies in glioma 8.39
WNK1 kinase and the termination factor PCF11 connect nuclear mRNA export with transcription 8.24
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 8.05
Gene expression analysis of CD4+ and CD4- ILC1 subsets by RNAseq 8.01
The role of PHF19 in promoting H3K27me3 deposition in multiple myeloma 7.81
The role of PHF19 in promoting H3K27me3 deposition in multiple myeloma (RNA-Seq) 7.81
Primate transcript and protein expression levels evolve under compensatory selection pressures 7.77
RNA-Seq analysis and comparison of corneal epithelium in keratoconus and myopia patients 7.74
m6A-seq data analysis of control and PCIF1 knockdown transcriptome 7.72
Expression by CD133+ cells isolated from the adult human exocrine pancreas 7.7
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies [RNA-Seq] 7.66
Incomplete MyoD-induced transdifferentiation is mediated by chromatin remodeling deficiencies 7.66
Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD) 7.65
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 7.53
Extracellular matrix hydrogel derived from decellularized tissues enables endoderm organoids culture 7.48
PAK4 suppresses RELB to prevent senescence-like growth arrest in breast cancer 7.41
RNA-Guided Human Gene Activation by Cas9/CRISPR-Based Engineered Transcription Factors 7.41
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression 7.4
Single cell analysis of HSV-1 infection reveals anti-viral and developmental programs are activated in distinct sub-populations with opposite outcomes 7.38
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 7.34
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [longRNA] 7.33
Maintaining iron homeostasis is the key role of lysosomal acidity for cell proliferation 7.32
Single-cell analysis of human kidney organoids 7.32
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (human 3' mRNA-seq) 7.31
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution 7.31
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] 7.31
Identification of renal resident macrophages across species 7.3
Loss of the Chr16p11.2 candidate gene QPRT leads to aberrant neuronal differentiation 7.3
Isolation of highly enriched cardiac mesoderm from differentiating human embryonic stem cells 7.17
CD13 and ROR2 permit isolation of highly enriched cardiac mesoderm from differentiating human embryonic stem cells 7.17
SHQ1 regulation of RNA splicing is required for T-lymphoblastic leukemia cell survival 7.15
Regulation of protein translation during mitosis 7.1
RNA sequencing of primary human platelets and in vitro cell lines 7.1
Global gene expression profiles of cardiomyocytes differentiated from human pluripotent stem cells (hiPSC-CMs) in 3D culture exposed to ethanol 7.08
Transcriptomic profiling of HeLa cells infected with Salmonella Typhimurium 7.08
Next generation sequencing of small RNAs isolated from exosomes in human semen 6.91
The RNA hairpin binder TRIM71 modulates alternative splicing by repressing Mbnl1 [RNA-seq & Ribo-seq] 6.84
The RNA hairpin binder TRIM71 modulates alternative splicing by repressing MBNL1 6.84
Self-organized amniogenesis by human pluripotent stem cells in a biomimetic implantation-like niche 6.83
Designer epigenome modifiers enable robust and sustained gene silencing in clinically relevant human cells 6.82
Designer epigenome modifiers enable robust and sustained gene silencing in clinically relevant human cells [RNA-seq] 6.82
Patient-derived luminal breast cancer xenografts with progestins 6.76
RNAseq analysis of patient-derived luminal breast cancer xenografts treated with progestins 6.76
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (ChIP-seq & RNA-seq datasets) 6.76
A comprehensive single cell transcriptional landscape of human hematopoietic progenitors 6.76
Thymine DNA Glycosylase as a novel target for melanoma: effect of TDG silencing on gene expression in SK-mel-28 melanoma cells 6.76
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 6.67
RNA-seq, ChIP-seq and single cell RNA-seq of human skin Langerhans cells 6.64
Human serum and heparin-free platelet lysate as appropriate xeno-free alternatives for production of human MuStem cell batches 6.57
Epigenetic silencing of the tumor suppressor RASSF4 favors multiple myeloma progression 6.55
Tracking distinct RNA populations using efficient and reversible covalent chemistry 6.46
Landscape and variation of RNA secondary structure across the human transcriptome 6.45
Transcriptional impact of MTHFD2 in Human Aortic Endothelial Cells 6.44
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 6.41
Generating Patterned Kidney Organoids for Studying Development and Diseases 6.41
RNA sequencing of 13 T-cell acute lymphoblastic leukemia patients (5 TCRAD-MYC translocated T-ALL_8TAL1-LMO2 T-ALL) 6.37
RNA-seq of IL-4 stimulated human keratinocytes 6.35
Isolation and Transcriptome Analyses of Human Erythroid Progenitors: BFU-E and CFU-E 6.25
mRNA expression profile of Lymphocytes 6.22
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity 6.22
The SPOP-containing Complex Functions as an E3 Ligase for SETD2 to Regulate Gene-Specific H3K36me3-Coupled Alternative Splicing 6.2
RNA-Seq of polysome profiling fractions and whole cell lysates of UVB-irradiated N-TERT keratinocytes 6.08
Lyophilized human cells stored at room temperature preserve multiple RNA species at excellent quality for RNA sequencing 6.08
NR4A1 Inhibition Synergizes with Ibrutinib in Killing Mantle Cell Lymphoma Cells 6.05
β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer 6.01
Regulatory network controlling tumor-promoting inflammation in human cancers [RNA-seq] 5.95
Regulatory network controlling tumor-promoting inflammation in human cancers 5.95
RNA sequencing of CACO-2 cells incubated with Bifidobacteria breve grown on human milk oligosaccharides. 5.93
TT-Seq captures the human transient transcriptome 5.88
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 5.83
Metabolic reprogramming of Kaposi’s sarcoma associated herpes virus infected B-cells in hypoxia 5.82
Targeting FOXA1-mediated repression of TGF-β signaling suppresses castration-resistant prostate cancer progression [RNA-Seq] 5.79
Targeting FOXA1-mediated repression of TGF-β signaling suppresses castration-resistant prostate cancer progression 5.79
The ribosomal prolyl-hydroxylase OGFOD1 decreases during cardiac differentiation, modulates translation and spliceosomal processes 5.78
Human Adipocytes Regulate Gene Expression in Triple-negative Breast Cancer Assessed by NGS Sequencing 5.78
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 5.78
The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC derived cardiomyocytes. 5.78
Genes significantly down or Up-regulated upon RNF219 knockdown. [RNA-Seq] 5.75
The comparison of high-throughput single-cell RNA-seq methods 5.75
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 5.73
Elucidating the microRNA-203 specific biological processes in glioblastoma cells from comprehensive high-throughput RNA-sequencing transcriptome profiling 5.72
Hit-and-run' programing of CAR-T cells using mRNA nanocarriers 5.71
The stress granule transcriptome reveals principles of mRNA accumulation in stress granules. 5.68
Dynamics of MBD2 deposition across methylated DNA regions during malignant transformation of human mammary epithelial cells 5.65
Dynamics of MBD2 deposition across methylated DNA regions during malignant transformation of human mammary epithelial cells (2) 5.65
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 5.65
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 5.65
SERPINA3- a novel keratinocyte differentiation promotor mediates epidermal barrier repair response in psoriatic lesion 5.65
Transcriptome analysis of kidney organoids 5.64
SnapShot-Seq: a method for extracting genome-wide, in vivo mRNA dynamics from a single total RNA sample 5.61
Total RNA-seq in ALL-SIL upon TLX1 knockdown 5.58
E2F1 orchestrates transcriptomics and oxidative metabolism in Wharton’s jelly derived mesenchymal stem cells from growth-restricted neonates 5.57
RNA-seq of resting and activated CD4+ T cells +-JQ1 5.56
Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy 5.56
Identification of mRNAs with reduced ribosomal loading upon knock-down of translation factor DAP5 from hESCs. 5.55
Transcriptomic profiling of human coronary artery endothelial cells under laminar shear stress (LS), oscillatory shear stress (OS) and static culture (ST) 5.53
RNA-seq data for non-targeting siRNA and CDK11 siRNA transfection in SHhES8 cells 5.52
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation 5.48
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture 5.48
Transcriptome-wide profiling of poly(A)-tail length, translation efficiency and mRNA stability using TED-seq, mRNA-seq, Ribo-seq and PRO-seq in ER stress conditions 5.4
A transcriptional regulatory network connects mitochondrial biogenesis and metabolic shift with stem cell commitment to hepatic differentiation 5.36
Total RNA sequencing of WT intestinal orgaonids. 5.35
Oncogenic MYC induces a dependency on the spliceosome in human cancer 5.34
Gene expression profiling study by RNA-seq in PDX model based diffuse type gastric cancers. 5.31
Isolation and Functional Interrogation of Adult Human Prostate Epithelial Stem Cells at Single Cell Resolution 5.27
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation 5.24
Oncogenic changes and EMT in normal human bile duct epithelial cells are caused by parasite-derived materials and N-nitrosodimethylamine 5.23
Quiescent glioblastoma cells shift to an epithelial-mesenchymal transition-like gene program 5.23
High-throughput RNA sequencing of human preovulatory cumulus and mural granulosa cells (mRNA) 5.21
Small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genes 5.21
Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [UNSWCD] 5.16
mTORC1 balances cellular amino acid supply with demand for protein synthesis through post-transcriptional control of ATF4 5.15
Differential responses by human respiratory epithelial cell lines to respiratory syncytial virus reflect distinct patterns of infection control 5.15
Studying iPSCs from a hibernating mammal reveals molecular mechanisms of cold resistance in neural tissues 5.14
Exploring transcriptomic landscapes in red cell populations, in their extracellular vesicles and on single cell level 5.12
Expression changes in melanoma cell lines under BRAFi treatment timepoints [RNA-Seq.CellLine.batch4] 5.12
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells 5.07
ETV4 is necessary for estrogen signaling and growth in endometrial cancer cells [RNA-seq] 5.07
Long non-coding RNA TYKRIL controls pericyte function and survival in the cardiovascular and central nervous system through regulation of p53 activity and PDGFRß expression 5.03
Mapping interactions for the TNIP2 hub protein 5.02
Single-cell analysis reveals stochastic regulation of type I IFN production by plasmacytoid dendritic cells and identifies host-derived environmental cues as amplifier of type I IFN production 4.99
Ribosome profiling upon inhibition of eIF4A 4.99
Comparative gene expression profiling of MHH-CALL4 cells subject to pharmacological JAK2 inhibitor treatment (ruxolitinib or CHZ868) or shRNA-mediated JAK2 depletion in vitro 4.98
JAK2 is dispensable for maintenance of JAK2 mutant B-cell acute lymphoblastic leukemias 4.98
RNA-seq of PC3 prostate cancer cell line xenografts in mice administered the ghrelin receptor antagonist [D-Lys3]-GHRP-6 or PBS for two weeks 4.9
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 4.88
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 4.84
RNA-seq of HDAC2-disrupted 293FT cells by CRISPR-Cas9 4.84
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 4.79
Transcriptional profiling of microglia; current state of the art and future perspectives 4.78
Role of microRNAs in the interaction between Salmonella and the host cell 4.74
Expansion of adult human pancreatic tissue yields organoids harbouring progenitor cells with endocrine differentiation potential 4.72
CDK4/6 inhibitor resistance in prostate cancer 4.62
Differential gene expression analysis between proliferating and quiescent human dermal fibroblasts 4.62
The LIN28B/let-7 axis is a novel therapeutic pathway in Multiple Myeloma 4.58
Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during Epithelial-to-Mesenchymal Transition [ESRP KD] 4.57
Expression profile of HNF1A knockdown and overexpression in 22RV1 and LNCaP cells respectively 4.57
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 4.56
Lipid catabolism inhibition sensitizes prostate cancer cells to antiandrogen blockade 4.54
Targeting JNK Pathway Expands Human Hematopoietic Stem Cells 4.54
HEK293 Heat-shock experiment 4.53
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 4.52
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression 4.47
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 4.47
RNA editing in nascent RNA affects pre-mRNA splicing 4.46
mRNA gene expression profiling in a human AML cell line treated with small molecule inhibitors that impact different RNA polymerase transcription complexes, or their combination, in comparison to a global DNA-damaging anthracycline compound 4.41
AZ1366: An inhibitor of tankyrase and the canonical Wnt pathway that limits the persistence of non-small cell lung cancer cells following EGFR inhibition 4.36
SNHG5 siRNA knock down in HCT116 cells 4.34
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 4.28
Transcriptomics analysis of gene expression in normal and METTL3 or WTAP deficient Human HeLa cells 4.28
HMGA2 Promotes Long-Term Engraftment and Myelo-Erythroid Differentiation of Human Hematopoietic Stem and Progenitor Cells 4.22
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes 4.18
Differential expression of pancreatic cancer PANC1 cells treated with pilocarpine 4.16
Transcriptome analysis of SKI knock-out in HL60 cells 4.16
Combined cistrome and transcriptome analysis of SKI in AML cells identifies SKI as a co-repressor for RUNX1 4.16
RNA-Sequencing data of Varicella Zoster Virus (VZV)-infected human dermal fibroblasts (HDF) 4.15
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 4.1
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 4.1
LIN28A Over-expression RNAseq 4.07
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu 4.06
Effect of PRDM11 depletion in U2932 cells 4.04
Comparison of expression profiles of APP-depleted prostate cancer cells (LNCaP) 4.02
Ets homologous factor has critical roles in epithelial dysfunction in airway disease [RNA-seq] 3.98
Ets homologous factor has critical roles in epithelial dysfunction in airway disease 3.98
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 3.95
Synaptic dysfunction in human neurons with Autism associated deletions in PTCHD1-AS 3.89
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] 3.87
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion 3.87
Disease-associated mutation in SRSF2 misregulates splicing by altering RNA binding affinities 3.86
Regulation of poly(A) tail and translation during the somatic cell cycle 3.83
Knock-down of Ror1 in MDA-MB-231 cell line decreases cell invasiveness 3.83
CXCR4 is a host factor that regulates Plasmodium development in hepatocytes 3.81
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner 3.78
IGF2BP1 promotes SRF-dependent transcription in cancer in a m6A- and miRNA-dependent manner [Huh-7] 3.78
Genome-wide RNA deep sequencing of CAL-101 or AKTi primed human T cells in comparison to traditionally expanded T cells 3.76
Transcriptome landscape of HeLa response upon triamcinolone acetonide 3.76
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HET] 3.76
RNAseq of human monocyte cell line (U937-Cas9) WT or IRF2KO 3.75
Mutually Exclusive CBC-Containing Complexes Contribute to RNA Fate. 3.7
Rnase L reprograms translation by widespread mRNA turnover escaped by antiviral mRNAs 3.65
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [mutant MEF2C] 3.64
A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module 3.62
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] 3.58
BBBomics - Human Blood Brain Barrier Transcriptomics Hub 3.58
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 3.55
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] 3.55
Human Sandhoff Disease Cerebral Organoids Exhibit Enlarged Size, Increased Cellular Proliferation, and Impaired Differentiation 3.51
DHX36 resolves G-rich structures in mRNA untranslated region to allow their translation 3.5
lncRNA-PCAT1 knockdown effect on the gene expression of androgen independent LNCaP (LNCaP-AI) cell line 3.49
Prolyl hydroxylation regulates protein degradation, synthesis, and splicing in human induced pluripotent stem cell-derived cardiomyocytes 3.48
Effect of BB608 on Gene Expression in HNSCC Cell Line 3.48
Functional significance of the HIV-1 Tat signature amino acid residues 3.43
mRNA-sequencing of 293T-no dice transfected with miR-16, miR-214, or KSHV-miR-K6-5p 3.39
Genetic-to-epigenetic Therapy for Pancreatic Cancer 3.38
Total RNA profiles associated with DDX3 wild-type (WT) or R534H variant expression with or without sodium arsenite treatment [RNA-seq] 3.38
Profiles of ribosome-associated mRNAs regulated by expression of wild-type (WT) or R534H variant of DDX3 with or without Sodium Arsenite treatment 3.38
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins 3.37
Newly defined ABCB5+ dermal mesenchymal stem cells promote healing of chronic iron overload wounds via secretion of interleukin-1 receptor antagonist 3.36
Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors [Modifications - screen] 3.35
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 3.35
Cell cycle dynamics of human pluripotent stem cells primed for differentiation 3.31
Effect of PDZ domain binding Kinase inhibition using TOPK-32 (called PBKi) on C4-2 cell transcriptome 3.3
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 3.3
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability [RNA-seq] 3.28
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability 3.28
RNA-seq analysis of control and Myc-induced U2OS cells 3.28
SF3B1 Degron knockdown RNA-seq 3.26
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 3.25
Transcriptome sequencing of K-562 cells 3.25
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors 3.23
RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with pancreatic carcinoma 3.21
Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants 3.2
Comparative Transcriptomics of Triple Negative Breast Cancer Stem Cells and Differentiated Tumor Cells Identifies Teneurin-4 as a Potential Therapeutic Target 3.19
Generation of Brain Region-specific Organoids using a Miniaturized Spinning Bioreactor and Modelling ZIKV Exposure 3.18
A NIK-SIX signaling axis controls inflammation by targeted silencing of noncanonical NF-κB 3.18
Investigation about Monocytes in metastatic breast cancer patients under chemotherapy +/- Avastin 3.16
Transcriptome data from human endocrine cells recovered from mouse grafts with pre-engraftment controls 3.16
Effect of ILF3 on translation during homeostasis and the antiviral response 3.15
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 3.14
Real-time observation of light-controlled transcription in living cells 3.14
Identification of epigenetic interactions between miRNA and DNA methylation associated with polycystic ovarian syndrome 3.08
Transcriptome Profiling Reveals the key genes and pathways involved in polycystic ovary syndrome [RNA-seq] 3.08
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq) 3.03
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation 3.03
Transcriptional profile in human S. haematobium infection 3.02
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes [RNA-seq] 3.01
Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes 3.01
Transcriptome profile of ATP7B KO cells and WT cells treated with Copper (Cu) to study Autophagy as a pro-survival mechanism in Wilson disease 2.94
Global transcriptome analysis of HAP1 cells 2.84
Identification of renal resident macrophages across species [C1] 2.84
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition 2.81
Enhancement of direct reprogramming from fibroblasts to epithelial lineages by OVOL2-induced mesenchymal-to-epithelial transition [CAGE] 2.81
Contribution of synergism between PHF8 and HER2 signalling to breast cancer development and drug resistance  2.79
Modulation of gene transcription and epigenetics of colon carcinoma cells by bacterial membrane vesicles 2.76
The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas 2.74
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 2.71
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq SS] 2.64
Cajal bodies are linked to genome conformation 2.6
Cajal bodies are linked to genome conformation [RNA-Seq] 2.6
Gene expression profiling of papillary thyroid cancer from central and invasive regions 2.52
Low H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas 2.5
Ribosome profiling of A549 cells depleted of RPLP1 and RPLP2 and infected with DENV. 2.45
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 2.43
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 2.43
RNA sequencing of mechanically strained NHEKs and control NHEKs 2.43
Dissecting the single-cell transcriptome network underlying gastric premalignant lesions and early gastric cancer [10x genomics] 2.42
The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. [RNA-Seq] 2.41
The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. 2.41
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies [RNA-seq data set 2] 2.41
Gene expression profiles of 4-1BB+PD-1-high, 4-1BB-PD-1-high, and PD-1-int tumor-infiltrating CD8 T cells in hepatocellular carcinoma 2.41
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 2.4
ELAVL2-regulated transcriptional networks in human neurons link atlernative splicing, autism and human neocortical evolution 2.39
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 2.36
Transcriptome profiling of HepG2 cells upon treatment of the menin-MLL inhibitor MI-503 or DMSO 2.36
Gene expression profiling of iPSC-derived cardiomyocytes with BAG3 mutations 2.32
IRF1 regulates IFN dependent and independent gene expression 2.32
RNA-seq data 2.31
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 2.3
To identify transcripts that are differentially expressed in the MYCN amplified vs MYCN non-amplified cell lines using Next Generation Sequencing 2.29
Transcriptome profiling of Cryptosporidium parvum infected lung and intestinal organoids 2.29
RNA isoform screens reveal the essentiality and tumor suppressor activity of ultraconserved poison exons 2.28
Race-specific transcriptome and Long non-coding RNA of ADT-resistant African-American prostate cancer cell models. 2.28
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets 2.27
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle [RNA-seq] 2.26
O-GlcNAc transferase fine-tunes MYC-dependent transcription to promote cell cycle 2.26
Transciptome profiling of NoDice and RNaseIII null cells prior to and after polyIC treatment 2.24
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (TLR perturbation Bulk RNA-Seq) 2.22
transcriptome studies of BRD4 inhibitor BDF-1253 on renal clear carcinoma 786-O cells 2.19
ERK signaling regulates opposing functions of JUN family transcription factors in prostate cancer cell migration 2.19
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress (Total RNA) 2.15
Chromatin landscape of human visceral and subcutaneous adipocytes 2.15
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 2.15
Blocking expression of inhibitory receptor NKG2A overcomes tumor resistance to NK cells 2.1
Illumina Total RNA-seq in HeLa 2.09
A stably self-renewing adult blood-derived induced neural stem cell exhibiting patternability and epigenetic rejuvenation 2.07
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene 2.04
AUF-1 affected genes in human skin cells 2.03
Cell Type-Specific Chromatin Signatures Underline Regulatory DNA Elements in Human Induced Pluripotent Stem Cells and Somatic Cells 2.02
Transcriptome analysis of human immortilized astrocytes reprogrammed into dopaminergic neurons 2.01
FOXO1 is an oncogenic mediator in AML1-ETO leukemia 1.99
Expression analysis of the TAF1 syndrome 1.99
RNA-seq expression data from FL-HSPCs after HOXA7 knockdown 1.99
Epigenomes and transcriptomes of human monocytes before and after in vivo exposure to Bacillus Calmette-Guérin vaccine 1.98
Proximity-CLIP provides a snapshot of occupied cis-acting elements on RNA in different subcellular compartments on a transcriptome-wide scale 1.98
Characterization of human CDK12 and CDK13 in the regulation of RNA processing 1.95
A single-cell transcriptome atlas of the human pancreas 1.92
Mitochondrial phosphoenolpyruvate carboxykinase (PCK2) regulates metabolic adaptation and glucose-independent tumor cell growth 1.91
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 1.91
Targeting Glioblastoma Stem Cells through Disruption of the Circadian Clock 1.9
Targeting Glioblastoma Stem Cells through Disruption of the Circadian Clock [RNA-Seq] 1.9
PRMT5 Interacts with the BCL6 Oncoprotein and is Required for Germinal Center Formation and Lymphoma Cell Survival 1.87
Positively selected enhancer elements endow tumor cells with metastatic competence 1.8
Genome-wide Dose-dependent Inhibition of Histone Deacetylases Reveals Their Roles in Enhancer Remodeling and Suppression of Oncogenic Super-enhancers 1.8
Identification of downstream genes regulated by YAP1 through knockdown and overexpression of YAP1 in U251 cell with a stably expression of mutant APP 1.77
Peripheral whole blood mRNAs and lncRNAs expression analysis in eosinophilic asthmatics 1.77
Regulators of cellular heterogeneity in basal-like breast cancer influence symmetric versus asymmetric division rates (shRNA targeting) 1.77
DNMT1-associated long non-coding RNA regulate global gene expression and DNA methylation in colon cancer 1.74
Human cells contain natural double-stranded RNAs with potential regulatory capacity 1.72
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 1.72
TGF-b-activated LncRNA LINC00115 is a critical regulator for glioma stem-like cell tumorigenicity 1.7
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [BAV] 1.68
Functional Inflammatory Profiles Distinguish Myelin-Reactive T Cells from Patients with Multiple Sclerosis 1.67
Transcriptome profiling of H1-iCas9 cells grown on laminin and on MEFs 1.66
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HEK293 cells treated with or without TNF-alpha 1.66
Iron response of HepG2 cells 1.65
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 1.64
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 1.64
DDX54 regulates transcriptome dynamics during DNA damage response [RNA-seq2] 1.64
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (RNA-seq dataset) 1.62
RNA-Sequencing approach for the identification of novel long non-coding RNA biomarkers in colorectal cancer 1.61
eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants 1.59
RNAseq transcriptome analysis of White Blood Cells (WBCs) from individuals with and without trisomy 21 [stranded] 1.57
A non-catalytic function of carbonic anhydrase IX contributes to the glycolytic phenotype and pH regulation in human breast cancer cells 1.57
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes 1.56
An optimization system for isolating and sequencing of single human colon cancer cells 1.56
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation [bulk] 1.55
Identification of the RB loss-induced transcriptome in prostate cancer [RNA] 1.55
Identification of the RB loss-induced transcriptome and E2F1 cistrome in prostate cancer 1.55
miRNAs affected by antagomiR-17 treatment 1.51
DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats 1.49
Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity 1.47
Diffuse Large B Cell Lymphoma cell line with Acquired Resistance to PI3Kδ Inhibitor Idelalisib 1.46
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 1.44
miR-93 Targets in Human Endothelial Cells 1.42
Immunophenotyping and Transcriptomic Outcomes in PDX-Derived TNBC Tissue 1.37
RNAseq of ribosomal fractionation to assess the effect of CBFB on translation regulation 1.36
A monocyte gene expression signature in the early clinical course of Parkinson’s disease 1.35
Gene expression changes in HSV-1 infected HeLa cells with knockdown of B2M 1.35
Characterization of EZH2-deficient human embryonic stem cells [ChIP-seq and bulk RNA-seq] 1.29
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid 1.28
Gene Expression Profiling of WT and KDM3A Knocked out Cell 1.26
Genome-wide maps of chromatin state and Gene Expression Profiling in HCT116 cells 1.26
Dermal endothelial cells of type 2 diabetic patients 1.18
Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet 1.16
Similarity of therapeutic networks induced by a multi-component herbal remedy in neurovascular unit cells 1.15
Consequences of Ribosomal Protein Haploinsufficiency in Human Hematopoiesis 1.13
Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles 1.09
Unraveling cis-regulatory elements by mapping structural changes in mRNAs 1.07
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 1.07
Transcriptomic responses to Ivacaftor and prediction of Ivacaftor clinical responsiveness 1.06
Effect of BMP inhibition or stimulation of primary human keratinocytes 1.05
Single-cell ID-seq identifies BMP signaling as a driver of a late stage epidermal differentiation program. 1.05
The circadian transcriptional landscape in primary human mammary epithelial cells 1.05
Measuring the effect of MYC on transcription during the DNA double-strand break response by RNA-seq of newly synthesized transcripts 0.96
Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis 0.96
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 0.95
The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq2] 0.93
MicroRNA-28 replacement for non-Hodgkin lymphoma therapy 0.92
TALEN-based knockout of mir-141 and mir-200c in SK-BR-3 cells 0.9
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy 0.86
Gene expression profiles of PD1-high, PD1-intermediate, and PD1-negative tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.8
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 0.77
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 0.77
RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood exosomes of patients with colorectal carcinoma 0.76
ETS1 induction by the omental microenvironment promotes ovarian cancer metastasis 0.74
ETS1 induction by the omental microenvironment promotes ovarian cancer metastasis [RNA-Seq] 0.74
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm 0.73
Global transcriptome analysis of WT versus HEB-/- hESCs 0.73
TLR2 dimerization blockade allows generation of homeostatic intestinal macrophages under acute colitis challenge 0.71
Next Generation Sequencing and m6A sequencing Facilitates Quantitative Analysis of Wild Type and genetic FTO knockdown ccRCC cells Transcriptomes 0.7
Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell RNA-seq 0.7
Treatment of prostate cancer cells with S-adenosylmethionine leads to genomewide alterations of transcription profiles 0.69
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia 0.69
Molecular characterization of BRSK2 and BRSK1 kinases as negative regulators of the NRF2 transcription factor 0.68
Single-cell analysis of adult human ovary using 10X genomics 0.66
RNA-Seq analysis of proliferating 4N and 2N RPE1 cells derived from single cell clones following inhibition of Aurora B to induce polyploidization [tpo10] 0.66
Assessing placental maturity through histological and transcriptomic analyses in idiopathic spontaneous preterm birth 0.66
Comparison of single-cell transcriptomics quality between unfixed cells and cells that were fixed and mock stained according to the RAID procedure 0.64
Characterizing the contrasting roles of JMJD3 and UTX histone demethylases in T cell acute lymphoblastic leukemia [GSKJ4_RNA-seq] 0.61
Global transcriptional analysis and genome-wide analysis of chromatin state in extended pluripotent stem cells, primed pluripotent stem cells, and naïve pluripotent stem cells 0.57
Global transcriptional analysis of human extended pluripotent stem cells, human primed pluripotent stem cells, mouse extended pluripotent stem cells, and mouse embryonic stem cells by RNA-seq 0.57
Temporal comparison of transcriptomic alterations in human, mouse and rat primary B lymphocytes exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) 0.57
RNA Expression Profile of Calcified Bicuspid, Tricuspid and Normal Human Aortic Valves by RNA Sequencing [TAV] 0.57
Gene expression profile of calcified and normal tricuspid aortic valves by RNA sequencing. 0.57
Expression of MERTK based on Multiple Sclerosis (MS) risk haplotype 0.53
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates [RNA-seq] 0.53
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates 0.53
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation 0.5
Transcriptome analysis-identified long noncoding RNA CRNDE in maintaining endothelial cell proliferation, migration, and tube formation 0.49
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation 0.48
Metastasis in triple-negative breast cancer 0.43
Functional and genomic characterization of a xenograft model system for the study of metastasis in triple-negative breast cancer. 0.43
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 0.42
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export 0.4
Oncogenic Antisense LncRNA P14AS Regulates Expression of ANRIL through AUF1 Binding 0.4
RNA-seq analysis of PRMT5-regulated genes in irradiated/non-irradiated LNCaP cells 0.4
Ex vivo Dynamics of Human Glioblastoma Cells in a Microvasculature-on-a-Chip System Correlates with Tumor Heterogeneity and Subtypes 0.39
The bromodomain protein BRD4 regulates splicing during heat shock 0.39
Intrinsic Plasma Cell Differentiation Defects in BENTA Patient B cells 0.39
Global transcriptomic analyses of bronchial epithelial cells exposed to 5 ng/mL TGF-β1 and 10 nM Estrogen individually and in combination 0.38
Research resource: global identification of estrogen receptor β target genes in triple negative breast cancer cells 0.37
Transcriptomic analysis of cultured isogenic myotonic dystrophy type 1 myoblasts with and without the DMPK CTG repeat 0.36
Azithromycin induces epidermal differentiation and multivesicular bodies in airway epithelia 0.34
Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq 0.33
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.33
SQSTM1/p62-directed metabolic reprogramming is essential for normal neurodifferentiation 0.31
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 0.28
Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology 0.27
Network-based, cross-cohort discovery of transcriptional mechanisms presiding over maintenance of high-risk neuroblastoma subtype state 0.26
Functional genomic analysis of the haploinsufficient tumor suppressor, CUX1 0.2
HEK293 TFAM Knockout Expression Study 0.2
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq] 0.19
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis 0.19
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 0.19
EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression 0.18
EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression [RNA-seq] 0.18
RNA-seq expression data from EB-HSPC after AM580 treatment compated to DMSO-trated and FL-HSPCs 0.16
Transcriptional changes during naturally-acquired ZIKA Virus infection render dendritic cells highly conducive to viral replication 0.16
Whole transcriptome sequencing of the human thyroid primary cells with knock-down of the NRG1 gene 0.13
RNA-Seq analysis of JIB-04 effects on global cellular transcription and HIV in 2D10 T cells 0.12
EGR1-controlled transcriptome of T HESCs 0.1
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α 0.1
CD133hi, Notchhi, DP (double positive) and DN (double negative) in GBML8 and GBML20, both patient-derived glioblastoma tumorsphere cultures 0.1
Identification and mitigation of pervasive off-target activity in CRISPR-Cas9 screens for essential non-coding elements 0.09
Role of cervicovaginal microbiota in genital inflammation 0.08
The secretome of skin cancer cells activates the mTOR/MYC pathway in healthy keratinocytes and converts them into tumorigenic cells 0.06
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues] 0.05
Hyperactive mTOR and MNK1 phosphorylation of eIF4E confer tamoxifen resistance and estrogen independence through selective mRNA translation reprogramming 0.04
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes 0.04
RNA-seq analysis of control and CDK12-depleted ovarian cancer cells 0.04
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line 0.02
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line [RNA-Seq] 0.02
ETV7 and interferon response 0.01
Impact of ETV7 activity on interferon-stimulated gene expression in 293T cells treated with interferon alpha 0.01


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