Gene Query: RNF152

Dataset Description Geneva Score
UBE3A-mediated regulation of imprinted genes and epigenome-wide marks in human neurons 76.61
Genetic Tagging During Human Mesoderm Differentiation Reveals Tripotent Lateral Plate Mesodermal Progenitors 47.2
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [longRNA] 44.67
IL-33 activates tumor stroma to promote intestinal polyposis 42.73
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons 41.55
Transcripotome analysis of different locations of hair follicles (bulb, bulge) in androgenetic alopecia 40.63
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs [GRO-seq II] 38.08
RNA sequencing of ESC/iPSC-derived purified PAX6-GFP neural progenitors form control and Phelan-Mcdermid patients 35.96
Effect of hypoxia and TGFβ1 on gene expression in HPF fibroblast cells 33.93
The Molecular Dissection of the Oncogenic Role of ETS1 in the Mesenchymal Subtypes of Head and Neck Squamous Cell Carcinoma [RNA-seq knock-down] 33.73
Gene expression by high-throughput sequencing of T47D-MTVL human breast cancer cells upon H1.4 knock-down and multiple H1 variants 31.79
STVI-120 Induction of differentiation in human epidermal stem cells followed by differential splicing analysis 31.31
PGE2 mediated gene expression changes in human cervical stromal cells 29.51
Next Generation Sequencing Facilitates Quantitative Analysis of ALDH+ E-BCSC, CD24-CD44+ M-BCSC and Bulk tumor cell Transcriptomes from MC1 and Vari068 PDX models of TNBC 29.41
Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma 28.89
A comparison of gene expression between lesional and non-lesional derived keratinocytes of Hailey-Hailey disease patients. 27.8
Gene expression data from IMR90 control, IMR90 shRRM2 and shRRM2/shp16 27.51
Bone marrow-derived and dental pulp-derived human mesenchymal stem cell RNA-Seq 26.63
Statins modulate endothelial transcriptional profile by inhibiting EZH2 26.45
Essential Roles of SETD7 as Transcriptional Activator and Co-regulator of H3K36me in Cardiac Lineage Commitment 26.21
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) 25.59
Inhibitors of the histone methyltransferases EZH2/1 induce a potent antiviral state and suppress infection by diverse viral pathogens [RNA-Seq] 25.21
Inhibitors of the histone methyltransferases EZH2/1 induce a potent antiviral state and suppress infection by diverse viral pathogens 25.21
Genetic and Epigenetic Landscapes of Laterally Spreading Tumors of the Colorectum 24.72
Novel Non-catalytic Substrate-selective p38α-specific MAPK Inhibitors with Endothelial-Stabilizing and Anti-inflammatory Activity 24.32
Indoxyl sulfate stimulates angiogenesis by regulating reactive oxygen species production via CYP1B1 24.13
RNA-seq of UGP2 mutant human embryonic stem cells and in vitro differentiated neural stem cells 23.98
Differentiation enhances Zika virus infection in neuronal brain cells 23.74
Simultaneous quantification of antibody-RNA conjugates and the transcriptome from fixed cells by RAID 22.88
Next Generation Sequencing Facilitates Quantitative Analysis of Human Pluripotent Stem Cell-Derived Endocardial-like And Primary Cardiac Endothelial Cell Transcriptomes 22.74
Molecular mechanism underlying increased ischemic damage in the ALDH2*2 genetic polymorphism using a human iPSC model system 22.68
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 22.34
Genome-wide identification of cancer-specific alternative splicing in circRNA 21.83
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] 21.75
Verification and rectification of cell type-specific splicing of a Seckel syndrome-associated ATR mutation using iPS cell model 21.69
RNA-sequencing time course of Human Intestinal Epithelial Cells (HIECs) following knockdown of miR-30bcd using complementary locked nucleic acids 21.61
Role of FGFR1 in neuronal devlopment 20.25
Model systems of DUX4 expression recapitulate the transcriptional profile of FSHD cells 20.02
BRG1 governs Glucocorticoid Receptor interactions with chromatin and pioneer factors across the genome 19.95
Identification of differentially expressed genes between senescence and senescence bypass cells 19.49
Examining serotonergic neuron differentiation from human iPSCs 19.28
IRF2 is a master regulator of human keratinocyte stem cell fate 19.12
IRF2 is a master regulator of human keratinocyte stem cell fate [RNA-seq] 19.12
Next Generation Sequencing Facilitated Differential Transcriptome Study of melanoma cells transduced with Notch 1 Intracellular Domain (NICD) 19.1
Modeling the MYC-driven normal-to-tumour switch in breast cancer. 19.02
The effects of U1 snRNA mutation in chronic lymphocytic leukemia cell lines 18.98
Transcriptome response to 4h IL-1b stimulation of primary chondrocytes 18.91
Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis [d7+d14] 18.81
Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors 18.52
Androgen receptor functions as transcriptional repressor of Cancer Associated Fibroblast (CAF) activation [RNA-seq] 18.37
Androgen receptor functions as transcriptional repressor of Cancer Associated Fibroblast (CAF) activation 18.37
Argonaute proteins couple chromatin silencing to alternative splicing 18.33
Argonaute proteins couple chromatin silencing to alternative splicing (RNA IP-Seq) 18.33
Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates 17.72
A novel P300 inhibitor reverses DUX4-mediated global histone H3 hyperacetylation, target gene expression and cell death 17.63
Premature polyadenylation-mediated loss of stathmin-2 is a hallmark of TDP-43-dependent neurodegeneration 17.53
Global transcriptome analysis of HAP1 cells 16.97
Patient iPSC-derived neural stem cells display progressive enlargement of lysosomes and disruptions of glycosaminoglycan pathway and autophagy in concordance with clinical severity of Mucopolysaccharidosis I 16.94
POU2AF1 Functions in the Human Airway Epithelium to Regulate Expression of Host Defense Genes 16.71
POU2AF1 Functions in the Human Airway Epithelium to Regulate Expression of Host Defense Genes [RNA-Seq] 16.71
Human iPSC-derived cells and microengineered Organ-Chip enhance neural development. 16.69
Cranial pericytes derived from neural crest cells reveal an inherent cell type-specific defect in Alzheimer's Disease 16.5
Coordinated control of senescence by lncRNA UCA1 and a novel CAPERα/TBX3 co-repressor 16.37
Transcriptome analysis of kidney organoids 16.25
Retinoic acid suppresses MYB in adenoid cystic carcinoma [RNA-seq] 15.93
Retinoic acid suppresses MYB in adenoid cystic carcinoma 15.93
RNA-seq of cultured human kidney peritubular microvascular endothelial cells following exposure to cyclosporine A 15.83
Integrated Systems Biology Analysis of KSHV Latent Infection Reveals Viral Induction and Reliance on Peroxisome Mediated Lipid Metabolism 15.58
Global gene expression differences between blood- and lymphatic-specific human dermal microvascular endothelial cells 15.49
Development of an In Vitro Human Liver System for Interrogating Non-Alcoholic Steatohepatitis 14.68
Massive parallel sequencing uncovers actionable FGFR2-PPHLN1 fusion and ARAF mutations in intrahepatic cholangiocarcinoma 14.19
Transcriptomic and gene ontology profiling of the human corneal cell types 14.01
Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles 13.9
Transcriptome profiling of influenza virus-infected human bronchial epithelial cells 13.85
Transcriptome analysis of human reninomas as an approach to understanding juxtaglomerular cell biology 13.81
Leukodystrophy-associated POLR3A mutations down-regulate the RNA polymerase III transcript and important regulatory RNA BC200 13.8
Analysis of MGE Transcriptomes with or without Ctnnb1 knockout in human through RNA Sequencing 13.74
Expression profiles of the four human major ectodermal lineages 13.7
Genome models integrating chromatin contacts and nuclear lamin-genome interactions reveal implications of laminopathy-causing lamin mutations on genome architecture 13.66
Transcriptomic profiling of human coronary artery endothelial cells under laminar shear stress (LS), oscillatory shear stress (OS) and static culture (ST) 13.63
Single Cell RNA-sequencing of cell types isolated by FACS from normal human prostates 13.27
Differentially expressed genes during pancreatic bud differentiation in cellular aggregates 13.19
Gene expression analysis of human liver progenitor-like cells in culture 12.98
Transcriptional landscape of epithelial and immune cell populations revealed through FACS-seq of healthy human skin 12.86
RNA-seq of human foreskin fibroblast cells lacking RB and/or p130 after doxorubicin treatment 12.81
mRNA sequencing of the mouse and human Hep-Orgs, Chol-Orgs and primary hepatocytes 12.72
Molecular analysis of renal cell carcinoma with unclassfied histology [gene expression] 12.69
Molecular analysis of renal cell carcinoma with unclassfied histology 12.69
RNA-seq analysis of RALD iPSCs after in vitro differentiation 12.42
Loss of the Chr16p11.2 candidate gene QPRT leads to aberrant neuronal differentiation 12.34
Transcriptome sequencing of differentially expressed genes in mouse and human skin with and without NCSTN mutation 12.28
Transcriptome sequencing of differentially expressed genes in acne inversa (AI) patients with NCSTN mutation and healthy individuals 12.28
Universal alternative splicing of noncoding exons 12.23
Endothelial gene expression analysis 12.09
Total RNA deep sequencing (ribosomal depleted) of human umbilical vein endothelial cells exposed to hypoxia (0.2%) for 12h and 24h or kept under normoxic conditions. 12.09
Oncogenic MYC induces a dependency on the spliceosome in human cancer 12.05
Cis-Regulatory Circuits Regulating NEK6 Kinase Overexpression in Transformed B Cells Are Super-Enhancer-Independent (RNA-seq) 11.88
Cis-Regulatory Circuits Regulating NEK6 Kinase Overexpression in Transformed B Cells Are Super-Enhancer-Independent 11.88
A non-canonical role of YAP/TEAD is required for activation of estrogen-regulated enhancers in breast cancer [RNA-seq] 11.86
A non-canonical role of YAP/TEAD is required for activation of estrogen-regulated enhancers in breast cancer 11.86
Transcriptome-analysis of patient-derived normal and ulcerative colitis intestinal epithelial organoids 11.72
Mastermind-like 3 controls proliferation and differentiation in neuroblastoma (RNA-seq) 11.71
Mastermind-like 3 controls proliferation and differentiation in neuroblastoma 11.71
Differential analysis of gene regulation at transcript resolution by RNA-Seq 11.66
Differential analysis of HOXA1 in adult cells at isoform resolution by RNA-Seq [Illumina] 11.66
Changes in human endometrial gland transcriptome over the window of implantation 11.66
RNA-seq of stable and unstable section of human atherosclerotic plaques 11.24
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation 11.17
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation (RNA-Seq) 11.17
Landscapes of gene translation in hepatocellular carcinoma tumors revealed by ribosome profiling 11.16
Transcriptome analysis of H9 hESC derived cerebral organoids 11.11
Next Generation Sequencing of human SMA and healthy control Motor Neurons 11.11
mRNA expression data from ESCs derived by polar body transfer reconstructed embryos (PBTESCs) 11.06
Telomere-Dependent and Telomere-Independent Roles of RAP1 in Regulating Human Stem Cell Homeostasis 10.82
Transcriptome analysis of genetically matched human induced pluripotent stem cells disomic or trisomic for chromosome 21 10.77
Global gene expression profiles of cardiac progenitors differentiated from human pluripotent stem cells in 3D culture under simulated microgravity 10.61
Regionally distinct astrocyte interferon signaling promotes blood-brain barrier integrity and limits immunopathology during neurotropic viral infection 10.55
Quantitative profiling of the UGT transcriptome in human drug metabolizing tissues [Total RNA] 10.46
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells 10.35
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells [Endoderm RNA-seq and ChIP-seq data sets] 10.35
Overexpression of NFIB and YBX1 in MCF-7 cells 10.03
An Open-Label Pilot Study to Evaluate the Efficacy of Tofacitinib in Moderate to Severe Patch Type Alopecia Areata, Totalis and Universalis 9.92
Next Generation Sequencing Compares Effects of microRNA-9 perturbation in control and SZ hiPSC NPCs 9.76
The Role of Histone H3 Lysine 36 Methylation in Reprogramming of fibroblasts and on Induced Pluripotent stem Cell Generation 9.75
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells 9.57
Capturing the biology of mild versus severe disease in a pluripotent stem cell-based model of Familial Dysautonomia 9.53
Transcriptome profiling of a mouse model of alveolar soft part sarcoma 9.49
Effect of circPTPRM on the biological behaviors of hepatocellular carcinoma cells in vitro and its clinical significance. 9.4
The expression of genes encoding palmitoylated proteins in axonal and synaptic compartments is affected in CLN1/PPT1 transfected neuronal cells 9.39
RAID allows multiplexed quantification of intracellular (phospho-)proteins and transcriptomes from fixed single cells 9.27
Transcriptional impact of MTHFD2 in Human Aortic Endothelial Cells 9.23
Tumor hypoxia causes DNA hypermethylation by reducing TET activity 9.21
Tumor hypoxia causes DNA hypermethylation by reducing TET activity (RNA-Seq) 9.21
Fbxo32 mediated gene expression program underlies EMT and metastasis 9.2
Deep sequencing of transcript levels in pluripotent stem cells and their differentiated derivatives in all three germ layers 9.17
Entrectinib Resistance in a Neuroblastoma Xenograft Model 9.16
Overexpression of UGT2B17 in MEC1 and JVM2 leukemia cell lines 9.09
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) of BJ cells treated with Nutlin-3a, an MDM2 inhibitor, which induces p53. 9.07
RNAseq of quiescent (Q) and stress induced premature senescent (SIPS) fibroblasts treated with plant extract (1201) from Solidago vigaurea subspecies alpestris 9.07
mRNA and miRNA expression in primary human muscle cells treated with 1,25(OH)2D3 or vehicle 9.04
RNA expression in primary huamn muscle cells treated with 1,25(OH)2D3 or vehicle 9.04
Expression profiling by high throughput sequencing of tumors derived from human prostate epithelial cells transformed with the oncogenes N-Myc and myrAKT1. 9.02
Ultracentifugation and nanoscale deterministic lateral displacement (nanoDLD) of samples for exRNA analysis 8.97
iPSCs Reveal Protective Modifiers of the BMPR2 mutation in Pulmonary Arterial Hypertension 8.94
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [HCC1599_RNA-seq] 8.93
Human Pancreatic Islets Expressing HNF1A Variant Have Defective β cell Transcriptional Regulatory Networks 8.78
UBR7 is a novel E3 ubiquitin ligase for H2BK120 and acts as a tumor-suppressor in breast cancer [RNA-Seq] 8.74
UBR7 is a novel E3 ubiquitin ligase for H2BK120 and acts as a tumor-suppressor in breast cancer 8.74
BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq) 8.63
Mechanistic Model-Guided Study of Embryonic Morphogenesis 8.57
Generation of trichogenic adipose-derived stem cells by expression of three factors 8.52
RNA-sequencing in immortalized human mammary epithelial cells 8.49
Alternative splicing regulated by QKI and RBFOX1 promotes the mesenchymal cell state in breast cancer 8.49
RNA-sequencing (RNA-seq) in BxPC-3 and S2-007 cell lines 8.4
RNA-Seq and ChIP-Seq reveals SQSTM1/p62 as a key mediator of JunB suppression of NF-kB-dependent inflammation 8.37
JunB control of keratinocyte-mediated inflammation [RNA-seq] 8.37
The Genomic Landscape of Atypical Fibroxanthoma 8.37
Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors 8.31
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes [RNA-Seq] 8.27
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes 8.27
Downregulation of DDX5/DDX17 and REST 8.09
DNA Methylation Reprograms Metabolic Gene Expression in End-Stage Human Heart Failure 8.03
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 8.02
The effect of spontaneous acquisition of an extra chromosome 7 for engineered del(7q) on induced pluripotent stem cells (iPSCs) derived from patients with Shwachman Diamond Syndrome (SDS). 7.99
Subtle asymmetry of gene expression in embryonic and foetal human brains 7.98
circRNA profile in hypopharyngeal cancer 7.98
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 7.96
Divergent expression and metabolic functions of human glucuronosyltransferases through alternative splicing 7.92
Genome-wide RNA-sequencing (RNA-seq) of benign and malignant prostate cell lines without and with androgen (R1881) stimulation. 7.87
Transcriptomic analysis of senescent cells upon EXOC7 knockdown. 7.85
Slit2 modifies VEGF-induced angiogenic responses in rabbit skeletal muscle by inducing capillary sprouting and decreasing vascular permeability via reduced eNOS activity 7.83
Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples 7.83
Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency 7.81
Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency (RNA-Seq) 7.81
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 7.8
RNA-sequencing of human vascular endothelial cells after si-RNA mediated gene silencing of interleukin-6 (IL6) 7.8
Chromatin accessibility landscape upon induction of Msgn1, Pax3 and Myf5 in mesodermal cells and identification of conserved Pax3 binding sites and target genes during skeletal myogenesis 7.73
Dissecting the dynamics of signaling events in the BMP,WNT and NODAL cascade during self-organized fate patterning in human gastruloids 7.71
Discovery and verification of liver cancer marker genes and variable scission based on second-generation sequencing data analysis 7.7
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells with PolyIC treatment 7.68
Hit-and-run epigenetic editing prevents senescence entry in primary breast cells from healthy donors [RNA-seq] 7.65
Hit-and-run epigenetic editing prevents senescence entry in primary breast cells from healthy donors 7.65
Synectin Promotes Fibrogenesis by Regulating PDGFR Isoforms Through Distinct Mechanisms 7.58
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HOM] 7.52
RNA-seq of human foreskin fibroblast cells lacking RB, p130, and p107 treated with doxorubicin. 7.49
Single-Cell RNA Sequencing Reveals Metallothionein Heterogeneity during hESC Differentiation to Definitive Endoderm [RNA-Seq] 7.49
Novel Form of JARID2 is Required to Regulate Differentiation in Keratinocytes. 7.46
Transcription-dependent control of stem cell self-renewal and differentiation by the splicing factor U2AF1 7.44
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data 7.44
DJ-1 is dispensable for human stem cell homeostasis 7.41
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 7.39
FGF2 regulation of gene expression in stable inducible Neurons 7.38
RNA Sequencing of three pairs of gastric cancer 7.34
Comparative analysis of WT and ZEB1 KO cells in different stages during differentiation 7.3
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing 7.29
Exploiting drug addiction mechanisms to select against MAPKi resistant melanoma 7.29
MicroRNA (miR)-211 loss promotes metabolic vulnerability and BRAF inhibitor sensitivity in melanoma 7.25
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs 7.22
RNA-sequencing transcriptome profiling of normal human keratinocytes differentiation 7.18
Analyses of a panel of transcripts and construction of RNA networks in hepatocellular carcinoma 7.17
RNA sequence analysis of stable versus reversible EMT events and the resultant metastases 7.11
Gene expression profile difference among renal location in a stone former 7.09
Transcriptomic Profiling of Developing Human Paraxial Mesoderm from 4.5-5 Weeks of Gestation Human Embryos 7.06
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 7.04
a-synuclein accumulation in an iPSC derived model of early onset sporadic Parkinson’s Disease reveals novel drug targets 6.91
Gene expression analysis of human hepatocellular cancers 6.88
Global gene expression differences between blood- and lymphatic-specific endothelial colony forming cells 6.72
circ-ZNF609 regulates G1-S progression in Rhabdomyosarcoma 6.7
Reprogramming of human stem cells towards a rejuvenated and transformation-resisting state by recoding a single nucleotide 6.64
Short and long-term effects of CDK4/6 inhibition on early stage breast cancer 6.63
NGS based identification of GD2-positive tumor-specific phenotype for cancer diagnostics and therapy 6.58
RNA-seq characterization of downstream effects of upregulating SMN2 via down-regulating PRC2 or blocking the PRC2:SMN-AS1 interaction with a mixmer oligonucleotide 6.49
Runx1 stabilizes the mammary epithelial cell phenotype and prevents epithelial to mesenchymal transition 6.44
Reciprocal Reprogramming of Cancer Cells and Associated Mesenchymal Stem Cells in Gastric Cancer. 6.44
RNA Seq of HMVEC under hypoxia 6.41
Endothelial-AGO1-knockout (EC-AGO1-KO) mice and wild-type (WT) littermates 6.41
RNA-seq analysis of hPSC-derived brain pericyte-like cells, hPSC-derived neural crest stem cells, and primary human brain pericytes 6.4
Cerebellar differentiation in Ataxia-Telangiectasia 6.39
Integrating the Epigenome to Identify Novel Drivers of Hepatocellular Carcinoma 6.38
CASZ1 directly regulates expression of myogenic genes through regional epigenetic modifications to induce muscle and rhabdomyosarcoma cell differentiation 6.36
Genes encoding cognate receptors for IRI-related recipient cytokines are expressed in donor livers 6.33
CD90 Identifies Adventitial Mesenchymal Progenitor Cells in Adult Humans 6.31
Transcriptional differences between skin from patients with atopic dermatitis and control skin obtained from the healthy margins of Mohs surgery patients 6.3
Genome-wide transcriptional profiling of YAP target genes in human endothelial cells 6.24
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 6.16
Gene expression regulated by CSA and CSB in neuroblastoma cell line 6.14
RNA sequencing for human induced pluripotent stem cell cardiomyocyte differentiation 6.07
Molecular pathogenesis of human prostate basal cell hyperplasia reveals a keratinocyte metaplasia 6.07
Inhibition of Enhancer of Zeste Homologue 2 attenuates TGF-β dependent hepatic stellate cell activation and liver fibrosis 6.04
Appropriately Differentiated ARPE-19 Cells Regain a Native Phenotype and Similar Gene Expression Profile 5.97
RUNX2/CBFB modulates the response to MEK inhibitors through activation of receptor tyrosine kinases in KRAS mutant colorectal cancer 5.97
RNA sequencing for lncRNA, miRNA and mRNA expression analysis in human laryngeal cancer 5.97
Self-organized amniogenesis by human pluripotent stem cells in a biomimetic implantation-like niche 5.96
Race-specific transcriptome and Long non-coding RNA of ADT-resistant African-American prostate cancer cell models. 5.87
Expansion, in vivo-ex vivo cycling and genetic manipulation of primary human hepatocytes 5.87
RNA-seq of SOX5 overexpressing primary human neuronal progenitors 5.82
Gene expression analysis of a panel of human fibroblasts that generate an aligned (anisotropic) vs non-aligned extracellular matrix 5.76
Single-cell RNA-seq reveals novel cell differentiation dynamics during human airway epithelium regeneration 5.75
Molecular Mechanisms of Endothelial Hyperpermeability 5.73
RNA-Seq identifies condition-specific biological signatures of ischemia-reperfusion injury in the human kidney 5.68
The X-linked DDX3X RNA helicase dictates translation re-programming and metastasis in melanoma 5.68
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors 5.66
Generation of Patient-Matched Malignant and Normal Primary Cell Cultures from Clear Cell Renal Cell Carcinoma Patients 5.65
Unbiased evaluation of cell-free amniotic fluid transcriptome of term and preterm infants to detect fetal maturity 5.64
Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis [RNA-Seq] 5.64
Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis 5.64
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response 5.6
TCF21 and Aryl-hydrocarbon receptor gene cooperate to activate a pro-atherosclerotic gene expression program 5.57
Enhancer Activation Requires Trans-Recruitment of a Mega Transcription Factor Complex 5.51
Enhancer Activation Requires Trans-Recruitment of a Mega Transcription Factor Complex (Gro-seq) 5.51
Immunophenotyping and Transcriptomic Outcomes in PDX-Derived TNBC Tissue 5.51
Differential gene expression tools exhibit substandard performance for long non-coding RNA-sequencing data 5.5
RNA-sequencing 5.5
Parkinson’s Disease Genetic Risk in a Midbrain Neuronal Cell Line 5.47
Effect of SHP2 inhibition on hepatic stellate cell transcriptome. 5.42
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes 5.4
SLIGRL-induced gene expression changes in NHEK cells 5.36
RNA sequencing of heart samples of myotonic dystrophic (DM1) patients 5.35
Next Generation Sequencing Analysis of Colorectal Cancer Tissue Transcriptomes 5.26
PNET animal model: new insights (II) 5.25
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver 5.24
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq] 5.24
TRIM28-Regulated Transposon Repression Is Required for Human Germline Competency and Not Primed or Naive Human Pluripotency 5.21
FUS mutant human motoneurons transcriptome analysis reveals altered pathways and impairment of microRNA function 5.2
Transcriptomics profiles of patient-matched normal kidney and ccRCC pairs 5.2
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 5.14
mRNA sequencing of oropharyngeal cancer cell lines 5.12
The chromatin modifier CHD8 targets autism risk genes during human neurodevelopment  5.08
Antiviral innate immunity of hepatitis C virus-infected stem cell-derived hepatocytes 5.08
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells 5.07
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_human] 5.05
Epigenome-wide Effects of Vitamin-D on Bronchial Epithelial Cells using ATAC-Seq and RNA-seq 5.03
Exploring the RNA landscape of endothelial exosomes 4.99
Brain organoids reproducibly generate the cellular diversity of the human cerebral cortex 4.99
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG functional reactivation [human cells RNA-seq] 4.98
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG 4.98
The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling 4.97
The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling [RNA-seq] 4.97
Integrin signaling regulates YAP/TAZ to control skin homeostasis 4.93
Splicing and gene expression changes in human mammary epithelial MCF-10A cells expressing SR or SR-like proteins 4.9
Genome-wide chromatin analysis of Ewing sarcoma (RNA-seq) 4.87
Genome-wide chromatin analysis of Ewing sarcoma 4.87
Gene expression in mature and immature human ES-derived beta cells, and sorted beta-cells from adult islets 4.86
A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [SHSY5Y cells] 4.81
Combined Genome and Transcriptome Sequencing to Identify Allelic Selection in Epithelial Ovarian Cancer 4.8
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development 4.77
Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq] 4.77
Recapitulation of Human Neural Microenvironment Signatures in iPSC-Derived NPC 3D Differentiation 4.77
SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons 4.74
Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow 4.69
Patterned human microvascular grafts enable rapid vascularization and increase perfusion in infarcted hearts 4.69
Splicing and epigenetic factors jointly regulate epidermal differentiation 4.65
Long noncoding RNA LNMAT1 promotes lymphatic metastasis in bladder cancer 4.64
Global loss of epigenetic and transcriptional fidility defines a subclass of cancer with immunotherapy resistance 4.57
Single-cell expression profiling reveals new roles for G-protein-coupled receptors in the regulation of Th17 pathogenicity 4.57
Anaylsis of the effect of down-regulation of the EWS-FLI1 fusion protein in Ewing Sarcoma cells by RNA-seq. 4.54
Integrative vascular endothelial cell genomics identify AIDA as a coronary artery disease candidate gene 4.54
Integrative vascular endothelial cell genomics identify AIDA as a coronary artery disease candidate gene (RNAseq) 4.54
Transcriptomic analysis of healthy donor and Sickle Cell Disease (SCD) hematopoietic stem/progenitor cells 4.44
Gene expression and genome-wide location analysis of breast cancer cell-lines 4.4
Gene expression analysis of breast cancer cell-lines 4.4
Zika infected neural stem cells 4.36
Transcriptome analysis of Zika infected neural stem cells 4.36
The role of CFTR in islet function 4.36
Joint-specific DNA transcriptome signatures in rheumatoid arthritis [RNA-seq] 4.33
Human stem cell based models of neuronal migration provide insight into neurological disease pathogenesis and potential treatment 4.29
GRHL2 is a key lineage determining factor which collaborates with FOXA1 to establish a targetable collateral pathway in the setting of endocrine therapy-resistant breast cancer (RNA-Seq data set 2) 4.26
RNA-Seq of LRRK2 G2019S Parkinson’s iPSC-derived astrocytes 4.24
Comprehensive analysis of microRNA expression in regionalized human neural progenitor cells reveals microRNA-10 as a caudalizing factor 4.21
4sU-seq of HFF exposed to salt and heat stress 4.2
RNA-Seq Analysis in purified iPS cell-derived neuronal samples 4.17
Transcriptomic profiling of nasopharyngeal carcinoma (NPC) and normal control samples 4.15
Transcriptomic profiling of mRNA and miRNA from nasopharyngeal carcinoma (NPC) and normal control samples 4.15
Epigenome regulation during epidermal lineage commitment [RNA-seq] 4.13
Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [DNA Methylation] 4.09
Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [RNA-Seq] 4.09
RNA-Seq data for five HER2 over-expressed samples with twelve green fluorescent protein control samples using human mammary epithelial cells 4.05
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours 4.03
Compared performance of Affymetrix HTA arrays and Illumina RNAseq for the analysis of tumours [RNA-seq] 4.03
Identifying markers predicting successful graft outcome for clinical translation of hESC-based cell therapy for Parkinson’s disease 3.97
Defective transcription elongation in a subset of cancers confers immunotherapy resistance (human cell lines RNA-Seq) 3.95
Transcriptome sequencing wide functional analysis of human mesenchymal stem cells (Poly(I:C) and LPS) 3.94
Transcriptional dependencies in diffuse intrinsic pontine glioma 3.94
Analysis of gene expression in primary human foreskin keratinocytes +/- HPV16 E7 or PTPN14 knockout 3.9
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq] 3.9
UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells 3.9
Gene Expression Profile of human hepatocellular carcinoma by RNA sequencing 3.83
Necroptosis inhibition protects from dopaminergic neuronal cell death in OPA1 mutant Parkinson’s disease patient neurons and MPTP treated mice 3.82
Investigation about fibroblasts of different origins in culture 3.82
Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia [shRNA] 3.6
RNAseq of Breast cancer PDX samples 3.56
Characterization and transplantation of enteric neural crest cells from human induced pluripotent stem cells 3.54
RNA-seq of hiPSCs-derived NPCs from 3 pairs of dizygotic discordant twins for Congenital Zika syndrome 3.52
Epithelial-mesenchymal transition and acquired resistance to ALK inhibitors 3.49
Gene expression profiling study by RNA-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors 3.49
Next Generation Sequencing Facilitates Quantitative Analysis of UVB(20mJ/cm2 and 40mJ/cm2) exposed and untreated HaCaT keratinocytes Transcriptomes 3.49
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 3.48
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [RNA-seq] 3.47
Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma [RNA-Seq; normal samples] 3.46
Impact of library preparation on downstream analysis and interpretation of RNA-seq data: comparison between Illumina PolyA and NuGEN Ovation protocol 3.44
LINE-2 transposable elements are a source of functional human microRNAs and target sites 3.42
Gene expression analysis of human adenomas. 3.38
Next Generation Sequencing upon siRNA-mediated knockdown of DRAIC in MCF-7 cells. 3.34
Differential Gene Expression between MCF10A and MCF7 cells 3.33
In vitro modeling of human germ cell development using pluripotent stem cells 3.29
12hr 5-FU treatment vs. DMSO in SJSA cells (from 'A kinase independent role for CDK19 in p53 response') 3.27
Long non-coding RNA profiling of human lymphoid progenitors reveals transcriptional divergence of B cell and T cell lineages 3.24
Long non-coding RNA TYKRIL controls pericyte function and survival in the cardiovascular and central nervous system through regulation of p53 activity and PDGFRß expression 3.21
Diverse AR-V7 cistromes in castration-resistant prostate cancer are governed by HoxB13 3.12
FOXP2's impact on the primate transcriptome 3.05
RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways 3.03
Newly defined ABCB5+ dermal mesenchymal stem cells promote healing of chronic iron overload wounds via secretion of interleukin-1 receptor antagonist 3.01
Defective transcription elongation in a subset of cancers confers immunotherapy resistance (BGI12 RNA-Seq) 2.97
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 2.95
To identify transcripts that are differentially expressed in the MYCN amplified vs MYCN non-amplified cell lines using Next Generation Sequencing 2.92
Transcriptome analysis of SH-SY5Y cells after knockdown of circSLC45A4 2.85
Comprehensive RNA sequencing of healthy human endometrium at two time points of the menstrual cycle 2.84
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 2.8
Transcriptome analysis-identified long noncoding RNA CRNDE in maintaining endothelial cell proliferation, migration, and tube formation 2.76
Transcriptional response of human endocervical epithelial A2EN cells to infection with wild-type or CpoS-deficient Chlamydia trachomatis L2/434/Bu 2.74
Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma 2.74
RNA Missplicing in Fuchs Endothelial Corneal Dystrophy 2.72
Identification of metabolically distinct adipocyte progenitor cells in human adipose tissues 2.71
Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype 2.71
Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype [RNA-seq] 2.71
Cutaneous Immunoprofile of Three Spotted Fever Group Rickettsiosis 2.68
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples 2.68
Histone H3.1K27 methylation promotes NHEJ by antagonizing FANCD2 on Chromatin 2.6
MULTI-seq: Universal sample multiplexing for single-cell RNA sequencing using lipid-tagged indices 2.5
Genome-wide expression from the esophageal biopsies of subjects with and without eosinophilic esophagitis 2.48
Genome Wide Chromatin Mapping of accessibility (ATAC-seq) and H3K27ac histone modifications in CD56bright and CD56dim natural killer cells 2.46
Transcriptome of iPSC-derived Neural Cells with Heterozygous Knockout in CHD8 2.39
Induction of Cardiomyocyte Proliferation [pz-822_human] 2.38
Regulation of Cell Cycle to Stimulate Adult Cardiomyocyte Proliferation and Cardiac Regeneration 2.38
Single-Cell reconstruction of differentiation trajectory reveals essential dynamics in human cardiac lineage commitment 2.37
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence 2.37
Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence [RNA-seq] 2.37
Novel Atherogenic Pathways from the Differential Transcriptiome Analysis of Diabetic Epicardial Adipose Tissue 2.3
Networks of cultured iPSC-derived neurons reveal the human synaptic activity-regulated adaptive gene program 2.28
Dynamic reorganization of nuclear architecture during human cardiogenesis 2.24
Dynamic reorganization of nuclear architecture during human cardiogenesis [RNA-seq] 2.24
Transcriptome landscape of HeLa response upon triamcinolone acetonide 2.24
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas 2.21
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq] 2.21
Human pulmonary artery endothelial cells (hPAECs) with downregulated BMPR2 signaling demonstrate a unique gene expression signature after exposure to overexpression of AdAlox5 2.18
Transcriptome-wide response to synthetic chromatin protein PcTF 2.13
T47D xenografts treated with various combinations of ER- and PR-targeting therapies 2.1
Stage-specific regulation of the WNT/β-catenin pathway enhances differentiation of hESCs into hepatocytes 2.05
The ALK downregulated target gene HBP1 and repressor of MYCN activity as synergistic target for combined PI3K/HDAC inhibition [RNA-Seq] 2.02
The ALK downregulated target gene HBP1 and repressor of MYCN activity as synergistic target for combined PI3K/HDAC inhibition 2.02
PRRX2 and HEY2 double knock-down facilitates ASCL1-induced neuron conversion in human dermal fibroblasts. 2.02
The circadian transcriptional landscape in primary human mammary epithelial cells 2.01
Disruption of GRIN2B impairs differentiation in human neurons 1.9
Interphase condensins regulate ligand-depedent enhancer activation (GRO-seq) 1.89
Interphase condensins regulate ligand-depedent enhancer activation 1.89
BI Human Reference Epigenome Mapping Project 1.89
Systems-level analyses reveal a convergent pathway for progression of diffuse astrocytoma and potential role for resveratrol in delaying high-grade transformation 1.88
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing (Total RNA sequencing) 1.88
Xeno-free and Chemically Defined Human System for Culturing Human Epidermal Keratinocytes 1.88
Pre-clinical evaluation of cysteamine bitartrate as a therapeutic agent for mitochondrial respiratory chain disease (human) 1.86
Pre-clinical evaluation of cysteamine bitartrate as a therapeutic agent for mitochondrial respiratory chain disease 1.86
Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain 1.84
Study of dynamic transcriptome profiling in DNA damage-induced cellular senescence and transient cell-cycle arrest 1.78
Long non-coding RNA expression profile associated with malignant progression of oral submucous fibrosis 1.76
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma non-targeting shRNA negative control (SHC002V) with puromycin selection RNAseq 1.76
Identifying deer antler proliferation and mineralization genes using comparative RNA-seq 1.75
RNA sequencing of lesional and nonlesional skin from patients with atopic dermatitis 1.75
Gene expression of collecting duct carcinoma of the kidney 1.74
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 1.72
Genome-wide transcriptome analysis of organotypic rafts derived from human papillomavirus type 16 infected primary keratinocytes [3D raft] 1.65
RNA-Seq analysis of cSCC cells followed by siRNA-induced gene knockdown of C1s. 1.64
Expression data for hiPSC-derived RPE treated with 10mM Nicotinamide or vehicle 1.64
Analysis of human ES cell differentiation establishes that the dominant isoforms of the lncRNAs RMST and FIRRE are circular 1.61
Transcriptome-wide identification of transient RNA G-quadruplexes in human cells 1.59
Alagille_Nodder 1.59
RNA Seq of Alagille liver biopsies 1.59
RNA-Seq of the corpus callosum from 12 individuals 1.56
Fusion discovery in breast cancer cell line 1.51
The expression profiles of GBC liver metastasis 1.48
Evaluating pre-clinical models for studying NASH driven HCC. 1.42
RNA-Seq of SHEP TET21N cells upon Doxorubicin treatment 1.42
Molecular characterization of gene regulatory networks in primary human tracheal and bronchial epithelial cells. 1.4
Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes 1.39
RNA Sequencing Analysis of villus tissues from unexplained recurrent spontaneous abortion patients and controls with induced abortions 1.39
HLA peptides derived from tumor antigens induced by inhibition of DNA methylation for development of drug-facilitated immunotherapy 1.38
The NFkB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells 1.36
RNA-seq identifies novel lncRNAs involved in vascular smooth muscle cell proliferation 1.35
Identification of expressed and conserved human non-coding RNAs 1.33
Gene expression profile of CRC-derived HILEC 1.33
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas 1.29
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq] 1.29
Transcriptomic analysis to functionally map the intrinsically disordered domain of EWS/FLI [Experiment 1] 1.27
Vammin induces a highly efficient angiogenic response through VEGFR-2/NRP-1 and bypasses the regulatory function of VEGFR-1 1.25
Kidney compartment specific eQTL studies highlight causal genes and pathways for renal disease development 1.23
Gene expression profiles of active and restricted R/G-HIV+ primary human fetal astrocytes 1.18
Epigenome regulation during epidermal lineage commitment 1.16
Deep RNA sequencing of the human placental transcriptome 1.14
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma 1.14
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma [RNA-Seq] 1.14
Next Generation Sequencing Facilitates Comparisons of Control and Schizophrenia-Patient derived hiPSC-derived neurons 1.13
Transcriptomic Profiling of Posterior Polymorphous Corneal Dystrophy 1.13
Genome-wide profiling of cervical RNA-binding proteins identified HPV regulation of RNASEH2A expression by viral E7 and E2F1 1.11
Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis 1.09
The influence of PPFIA1 silencing to gene expression in breast carcinoma cell line and head and neck squamous cell carcinoma cell lines by RNA-sequencing in three dimensional collagen I 1.09
Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes 1.05
Ex vivo Dynamics of Human Glioblastoma Cells in a Microvasculature-on-a-Chip System Correlates with Tumor Heterogeneity and Subtypes 1.0
RNA expression profiles comparing primary and omental ovarian carcinoma samples 0.98
Illumina HiSeq Sequencing on Breast cancer PDX samples 0.98
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing 0.96
Differentially Expressed Genes for Atrial Fibrillation Identified using RNA Sequencing from Paired Human Left and Right Atrial Appendages. 0.91
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 0.85
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 0.85
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues] 0.84
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) in proliferation, quiescence, senescence and transformed states. 0.81
Genome-wide expression analysis of young, senescent and p38MAPK-inhibitited senescent human fibroblasts. 0.78
Zika virus infection reprograms global transcription of host cells to allow sustained infection 0.75
Bone marrow derived human B cells [normal proB] 0.74
Developing a Novel Two-Dimensional Culture System to Enrich Human Prostate Luminal Progenitors That Can Function as a Cell of Origin for Prostate Cancer 0.74
Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4 0.72
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy 0.7
RNA-Seq characterization of human H1-derived NPC differentiation timecourse 0.68
Genome-scale screens identify JNK/JUN signaling as a barrier for pluripotency exit and endoderm differentiation 0.65
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP 0.65
A single-cell transcriptome atlas of the human pancreas 0.61
Transcriptome sequencing identify a recurrent CRYL1-IFT88 chimeric transcript in hepatocellular carcinoma 0.55
A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism. 0.52
A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism: Liver RNA profiles of lean non-diabetic, obese non-diabetic as well as obese diabetic humans. 0.52
Transcriptomic Analysis of Endothelial Cells from Fibrovascular Membranes in Proliferative Diabetic Retinopathy 0.52
Effect of MDK expressing Melanoma cells conditioned media in Human LEC 0.5
Long noncoding RNA ROCR contributes to SOX9 expression and chondrogenic differentiation of human mesenchymal stem cells 0.45
RNA-seq of Human neck of femur (NOF) fracture hip and osteoarthritic (OA) cartilage 0.45
Hyper-excitability of Neurons generated from Patients with Bipolar Disorder 0.44
Pro-angiogenic Ginsenoside F1 and Rh1 Inhibit Vascular Leakage by Modulating NR4A1 0.4
Activity-dependent transcriptional changes in human neurons 0.39
Gene expression profiling of human iPS cell-derived podocytes and sorted human adult podocytes 0.38
LIN28A modulates splicing and gene expression programs in breast cancer cells [RNA-Seq] 0.37
LIN28A modulates splicing and gene expression programs in breast cancer cells 0.37
RNA-sequencing of the human milk fat layer during colostrum, transitional, and mature stages of lactation 0.36
Immune Checkpoint Regulation of Pulmonary Fibrosis [bulk RNA-seq] 0.36
ALS implicated protein TDP-43 sustains levels of STMN2 a mediator of motor neuron growth and repair 0.34
Transcriptomic profiling of sequential tumours from breast cancer patients provides a global view of metastatic expression changes following endocrine therapy 0.33
CRISPR-Cas9 based screen for p53-bound enhancers that function in oncogene-induced senescence 0.28
Osmostress induced changes of chromatin architecture and transcription in mammalian cells [RNA-Seq, HiC] 0.27
Osmostress induced changes of chromatin architecture and transcription in mammalian cells 0.27
BET bromodomain inhibition 0.25
Effect of BET bromodomain inhibition with JQ1 in stressed human derived iPS cardiomyocytes 0.25
MicroRNA Marker Based Prognostication of Oral Squamous Cell Carcinoma 0.22
The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions 0.22
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes] 0.18
Transcriptomes in healthy and CHB fetal hearts 0.16
Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_Stability] 0.15
The age and genomic integrity of neurons after cortical stroke in humans 0.13
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches 0.12
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [RNA-Seq] 0.12
RNA-sequencing of tamoxifen-resistant and -sensitive breast cancer cell lines. 0.09
Transcriptomic analysis of human iPS cells derived from fragile X syndrome patients during neural differentiation 0.09
SREBP1 drives Keratin 80-dependent cytoskeletal changes and invasive behavior in endocrine resistant ERα breast cancer 0.08
A genomic study of the contribution of DNA methylation to regulatory evolution in primates 0.08
Integrative analysis of mRNA and lncRNA profiles identified pathogenetic lncRNAs in esophageal squamous cell carcinoma 0.02
The transcriptome of Kawasaki Disease arteritis 0.01


Contact Us

For scientific and technical queries contact Butte Lab @UCSF


Cite GENEVA Tool

Manuscript in Preparation