Gene Query: SAAL1

Dataset Description Geneva Score
Hijacking of stress response machinery by oncogenes in acute leukaemia 14.67
Hijacking of stress response machinery by oncogenes in acute leukaemia [RNA-seq] 14.67
Response of HEK293 Freestyle cells to 36 h of culture in Zn(II)-depleted Freestyle medium 11.71
The regulartory role of ZCCHC24 in splicing machinery 11.54
Differential YAP expression in glioma cells induces cell competition and promotes tumorigenesis 11.09
Identification of mRNAs with reduced ribosomal loading upon knock-down of translation factor DAP5 from hESCs. 10.7
DART-seq: an antibody-free method for global m6A detection 10.36
Crizotinib v. DMSO in SW480 cells 9.41
Gene-Centric Functional Dissection of Human Genetic Variation Uncovers Regulators of Hematopoiesis 9.09
Development of a selective CDK9 degrader from a multi-targeted CDK inhibitor [RNA-seq] 8.59
Development of a selective CDK9 degrader from a multi-targeted CDK inhibitor 8.59
TRIM28 interacts with EZH2 and SWI/SNF to activate genes that promote mammosphere formation 8.56
Triplet nucleotide repeat-based siRNAs are highly toxic to cancer cells 8.53
A role for p53 in the adaptation to glutamine starvation through the expression of Slc1a3 8.2
Comprehensive comparative analysis of 5’ end RNA sequencing methods 7.86
The E3 ubiquitin ligase HectD1 suppresses EMT and metastasis by targeting the +TIP protein ACF7 for degradation 7.78
Regulation of mRNA half-life by an inhibitor of human decapping enzyme Dcp2 following transcription shutoff in HEK293T cells 7.74
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 7.71
Impact of ETV7 activity on interferon-stimulated gene expression in 293T cells treated with interferon alpha 7.65
ETV7 and interferon response 7.65
Epigenetic Therapy Increases Therapeutic Efficacy in Myeloproliferative Neoplasms Through Inhibition of Aberrant Inflammatory Signaling 7.54
The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin Remodeling Complexes 7.46
Effect of Hotair overexpression in human breast cancer cell lines 7.13
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection (RNA-sequencing) 6.86
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection 6.86
HMGA2 Promotes Long-Term Engraftment and Myelo-Erythroid Differentiation of Human Hematopoietic Stem and Progenitor Cells 6.82
Lysine benzoylation is a novel histone mark [RNA-seq] 6.64
Lysine benzoylation is a novel histone mark 6.64
Parkinson’s Disease Genetic Risk in a Midbrain Neuronal Cell Line 6.57
β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer 6.33
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 6.33
Transcriptomic analysis of trametinib-resistant HCT116 colorectal carcinoma cells compared to the parental control cells 6.28
Quantitative mass spectrometry-based proteomics reveals the dynamic protein landscape during initiation of human Th17 cell polarization 6.21
A549 cells and MSR-A549 cells 6.12
mRNA expression profile of A549 cells and MSR-A549 cells with or without JQ1 treatment 6.12
LSD1 pharmacological inhibition in SET-2 containing wild type and mutant LSD1 [RNA-Seq] 5.93
LSD1 pharmacological inhibition in SET-2 containing wild type and mutant LSD1 5.93
RNAseq of HEK293 cells after Chtop knockdown 5.73
Co-transcriptional loading of RNA export factors shapes the human transcriptome 5.73
The dynamics of cellular response to therapeutic perturbation using multiplexed quantification of the proteome and transcriptome at single-cell resolution 5.64
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 5.55
Gene expression profiles of isogenic single-cell derived clones of BRAF-mutated SK-MEL-5 melanoma cell lines 5.52
Differential roles of human PUS10 in miRNA processing and tRNA pseudouridylation 5.5
Next Generation Sequencing Facilitates Quantitative Analysis of HIV-1 Latency in Central Memory T Cells 5.49
Transcriptional profile of human STAT1-/- fibroblasts expressing IFI6 or empty control vector 5.4
scRNASeq analysis of cycling cardiomyocytes 5.32
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates 5.29
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential 5.28
Genome-wide analysis of the Integrator complex (HTS) 5.27
Genome-wide analysis of the Integrator complex 5.27
Transcriptomic analyssis following EHMT1/2 inhibition 5.22
Expression changes in melanoma cell lines under BRAFi treatment timepoints [RNA-Seq.CellLine.batch4] 5.1
In vitro differentiation of human low threshold mechanoreceptive (LTMR) neurons from embryonic stem cells 5.09
Gene expression analysis of ER+ and ER- breast cancer cell lines with acquired resistance to palbociclib 5.07
The landscape of alternative splicing in aggressive prostate cancers 5.05
Cancer avatars derived from genetically engineered pluripotent stem cells allow for longitudinal assessment of tumor development 5.05
Bromodomain protein BRD4 is a transcriptional repressor of autophagy and lysosomal function 4.99
Global gene expression profile of dasatinib-resistant RCH-ACV cells 4.97
RNA-seq analysis of HT-29, MCF10A, and MDA-MB-436 cells 4.86
Global gene expression profiling from LeuCAG3'tsRNA depleted- HeLa and HCT-116 cell lines through 50 base pair paired-end RNA-seq 4.74
Transcriptomic hallmarks of tumor plasticity and stromal interactions in brain metastasis [MultiDisease] 4.71
Generating Patterned Kidney Organoids for Studying Development and Diseases 4.68
Chemical Modulation of Glycolysis Regulates the KEAP1-NRF2 Pathway Through a Metabolite-Induced Posttranslational Modification 4.68
Aging Human Hematopoietic Stem Cells Manifest Profound Epigenetic Reprogramming of Enhancers That May Predispose to Leukemia (RNA-seq of KLF6 KO) 4.65
The long non-coding RNA MALAT1 contributes to the pathogenesis of multiple sclerosis through alternative splicing and backsplicing regulation 4.58
IGF2BP3 controls cancer cell invasiveness by modulation RISC function 4.55
Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development 4.42
RNA-seq of UGP2 mutant human embryonic stem cells and in vitro differentiated neural stem cells 4.4
Nrf2 regulated genes in A549 cells 4.35
Identification of Nrf2 regulated genes by RNA sequencing 4.35
Transcriptomic hallmarks of tumor plasticity and stromal interactions in brain metastasis 4.24
The impact of stanniocalcin 1 on the transcriptome of human cord blood stem/progenitors 4.14
Essential Roles of SETD7 as Transcriptional Activator and Co-regulator of H3K36me in Cardiac Lineage Commitment 4.14
RNAseq of PRMT4KD in human cord blood derived CD34+ cells 4.11
Ribosome queuing enables non-AUG translation to be resistant to multiple protein synthesis inhibitors 4.1
Profiling of protrusion-enriched RNAs from human breast cancer cell line MDA-MB-231 4.07
12hr 5-FU treatment vs. DMSO in SJSA cells (from 'A kinase independent role for CDK19 in p53 response') 4.06
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells 4.05
24hr CA treatment vs. DMSO in HCT116 cells (from 'Identification of CDK8 and CDK19 substrates in human cells using cortistatin A and quantitative phosphoproteomics') 4.04
The effect of Abl kinases on non-small cell carcinoma global transcriptome 4.01
Single-cell analysis of adult human ovary using 10X genomics 4.0
SMN2 splicing modifiers improve motor function and longevity in mice with spinal muscular atrophy 4.0
Transciptome profiling of NoDice and RNaseIII null cells prior to and after polyIC treatment 3.98
The X-linked DDX3X RNA helicase dictates translation re-programming and metastasis in melanoma 3.96
The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas 3.95
LSD1 mediates AKT activity in PIK3CA mutant colorectal cancer [RNA-Seq] 3.95
LSD1 mediates AKT activity in PIK3CA mutant colorectal cancer 3.95
Culture-induced recurrent epigenetic aberrations in human pluripotent stem cells [RNA-seq] 3.94
Culture-induced recurrent epigenetic aberrations in human pluripotent stem cells 3.94
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury [human iPS] 3.88
Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury 3.88
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 3.83
LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene 3.81
Single-Cell reconstruction of differentiation trajectory reveals essential dynamics in human cardiac lineage commitment 3.76
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 3.72
Leukodystrophy-associated POLR3A mutations down-regulate the RNA polymerase III transcript and important regulatory RNA BC200 3.69
Gene expression changes in human melanoma cell lines compared to primary melanocytes 3.66
Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD) 3.65
Comparative whole-transcriptomic analysis between normal and AKAP-Lbc-depleted human embryonic stem cells 3.65
Che-1 is targeted by c-Myc to sustain proliferation in pre-B-cell acute lymphoblastic leukemia 3.62
Che-1 is targeted by c-Myc to sustain proliferation in pre-B-cell acute lymphoblastic leukemia [RNA-seq] 3.62
N6-methyladenosine Recruits HNRNPG for Alternative Splicing Regulation 3.57
LINE-1 elements are derepressed in senescent cells and elicit a chronic Type-I Interferon response 3.57
DHX15 regulates CMTR1-dependent gene expression and cell proliferation 3.53
Gene expression profile in breast cancer cell lines using RNA sequencing 3.52
Reprogramming by de-bookmarking somatic transcriptional program via targeting the BET bromodomains 3.45
MBNL1-dependent modulation of gene expression in MDA-MB-231 breast cancer cells 3.43
Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts 3.43
Transcriptome analysis of genetically matched human induced pluripotent stem cells disomic or trisomic for chromosome 21 3.42
Small-molecule targeting of brachyury transcription factor addiction in chordoma 3.41
Dynamic incorporation of histone H3 variants into chromatin is essential for acquisition of aggressive traits and metastatic colonization 3.41
The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-PBS / R-2HG treatment 3.39
A novel lncRNA lncRNA-AK096729 promotes colorectal carcinogenesis and glucose metabolism by stabilizing and specifying the transcription modification pattern of c-Myc 3.38
Effect on small molecule RBPJ inhibitor (RIN1) on gene expression in Jurkat cells compared to gamma secretase inhibition and siRNA knockdown of RBPJ 3.38
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress (Total RNA) 3.37
Knockout of miR-221 and miR-222 reveals overlapping and specific function between paralogous miRNAs 3.37
Transcription control by the ENL YEATS domain in acute leukemia [RNA-seq] 3.36
Transcription control by the ENL YEATS domain in acute leukemia 3.36
Global transcriptional profiling changes upon knockdown of LKB1 in human glioblastoma cell lines 3.36
Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 3.36
m6A-seq data analysis of control and PCIF1 knockdown transcriptome 3.32
Isolation and Transcriptome Analyses of Human Erythroid Progenitors: BFU-E and CFU-E 3.31
Developmental stage specific chromosome architecture in human erythroid cells 3.31
Developmental stage specific chromosome architecture in human erythroid cells (RNA-seq) 3.31
Splicing towards noncoding isoforms in colorectal carcinoma is associated with tumor hypoxia and the DNA damage response 3.3
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 3.3
An Argonaute phosphorylation cycle promotes microRNA-mediated silencing [whole transcriptome RNA-seq] 3.28
RNA Sequencing Facilitates Quantitative Analysis of Transcriptomes of H1, H1 derived APLNR+ cells, CD31+CD34+ cells and CD43+ cells during human early hematopoietic differentiation 3.26
RNA-Seq comparative analysis of human neuroblastoma cells before and after their confrontation to the embryonic microenvironment 3.26
Genistein and bisphenol A exposure cause estrogen receptor 1 to bind thousands of binding sites in a cell type-specific manner 3.25
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) 3.22
Expression changes in melanoma cell lines pre MAPKi treatment vs. post-MAPKi resistance (RNA-seq_CellLine.batch2) 3.17
The RNA-binding protein RBM47 suppresses metastatic breast cancer progression 3.16
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] 3.16
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes 3.16
Bromodomain inhibition of the transcriptional coactivators CBP/EP300 as a therapeutic strategy to target the IRF4 network in multiple myeloma (RNA-Seq) 3.15
Bromodomain inhibition of the transcriptional coactivators CBP/EP300 as a therapeutic strategy to target the IRF4 network in multiple myeloma 3.15
RNA-sequencing of isogenic primary, pre-malignant immortalized, and Ras-transformed human mammary epithelial cells 3.11
The effect of doxycycline-induced expression of host-cell-factor 2 (HCF-2) proteins on the global gene expression in HEK-293 cells 3.11
Bromodomain-containing Protein 4 (BRD4) is Required for the Maintenance of a Mammary Epithelial Phenotype [RNA-Seq] 3.09
Bromodomain-containing Protein 4 (BRD4) is Required for the Maintenance of a Mammary Epithelial Phenotype 3.09
Effect of Influenza virus infection on lncRNA expression in A549 cells 3.09
Silencing p300 in MCF7 cells to study expression and alternative splicing 3.06
Knock-down of Ror1 in MDA-MB-231 cell line decreases cell invasiveness 3.04
Trans-differentiation of human adult peripheral blood T cells into neurons 3.03
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression 3.03
RUNX2/CBFB modulates the response to MEK inhibitors through activation of receptor tyrosine kinases in KRAS mutant colorectal cancer 3.03
PRRX2 and HEY2 double knock-down facilitates ASCL1-induced neuron conversion in human dermal fibroblasts. 3.01
Tristetraprolin disables prostate cancer maintenance by impairing proliferation and metabolic function 3.01
The cohesin complex prevents Myc-induced replication stress 2.99
Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling 2.97
Enhancement of Arterial Specification in Human Pluripotent Stem Cell Cultures Promotes Definitive Hematoendothelial Program with Broad Myelolymphoid Potential 2.96
Heterozygous p53-R280T mutation promotes proliferation of NPC cells through activating PI3K/Akt signaling pathway 2.94
The BCL6 RD2 domain governs commitment of activated B-cells to form germinal centers 2.89
Transcriptome-wide modulation of splicing by the exon junction complex 2.89
Transcriptomic analysis of T84 colon carcinoma cell line treated with trametinib, JQ1 or their combination 2.86
Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation 2.84
The Polycomb protein BMI1 induces an invasive gene expression signature in melanoma that promotes metastasis and chemoresistance. 2.83
Human Adult Sorted Live Cell Erythroblasts transduced with Sigma shRNA Clone TRCN0000005418 targeting RIOK3 with puromycin selection RNAseq 2.82
XPO1 inhibition antagonizes MCL via nuclear retention of IkB: Selinexor demonstrates antitumor activities in both ibr-sensitive and ibr-resistant tumor cells 2.82
Activation of the p53 transcriptional program sensitizes cancer cells to Cdk7 inhibitors 2.82
The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion 2.81
RNA-seq of resting and activated CD4+ T cells +-JQ1 2.81
Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. 2.8
Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. 2.8
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos 2.79
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation 2.79
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation [RNA-Seq] 2.79
Cajal bodies are linked to genome conformation [RNA-Seq] 2.77
Cajal bodies are linked to genome conformation 2.77
Transcription-dependent control of stem cell self-renewal and differentiation by the splicing factor U2AF1 2.77
Enriched EWSR1 and EWS-FLI1 RNA-seq of HNRNPH1-silenced TC32 Ewing sarcoma and 293T human embryonic kidney cells. 2.76
RNA-seq analysis of uveal melanoma cells treated with FR900359 2.75
Transcriptional profile of CAOV2 primary and CAOV2 recurrent cells 2.74
Mapping interactions for the TNIP2 hub protein 2.74
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer 2.71
Long Non-coding RNA PICSAR Promotes Growth of Cutaneous Squamous Cell Carcinoma by Regulating ERK1/2 Activity 2.7
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition [RNA-Seq] 2.7
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition. 2.7
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase 2.69
Genome-wide transcriptome analysis of NIPBL iPSC and commited cardiomyoctes 2.68
Transcriptome of iPSC-derived Neural Cells with Heterozygous Knockout in CHD8 2.64
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma [RNA-Seq] 2.63
Direct interaction of MYCN and p53 regulate transcriptional responses in neuroblastoma 2.63
RNA-seq of MDA-MB-231 cells with TET1 knockout 2.63
PRDM1 inhibits proliferation of human colon cancer organoids 2.59
Adaptive resistance of melanoma cells to RAF inhibition via reversible induction of a slowly-dividing de-differentiated state 2.59
Effect of ER stress on MUC1 kidney disease patient derived cells and and treatment by BRD4780 2.56
Next-generation RNA sequencing to determine changes in gene expression during breast cancer progression 2.56
RNA-Seq analysis of cSCC cells after siRNA-induced gene knockdown of lncRNA PRECSIT 2.53
3’ Uridylation Expands miRNA Target Repertoire 2.49
Activating PAX Gene Family Paralogs to Complement PAX5 Leukemia Driver Mutations 2.49
Expression profiling by high throughput sequencing of tumors derived from human prostate epithelial cells transformed with the oncogenes N-Myc and myrAKT1. 2.48
Translating transcriptome of cancer cells in situ in mesenchymal-rich tumor microenvironment 2.47
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 2.47
RNA Seq data: A375, A375R, A375DR vorinostat treated, and biopy samples from patients pre- and post- treated with Vorinostat 2.47
An acquired vulnerability of drug resistant melanoma with therapeutic potential 2.47
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression 2.45
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells 2.45
Dioxin and AHR impairs mesoderm gene expression and cardiac differentiation in human embryonic stem cells (RNA-Seq) 2.45
RNA-seq of three Ewing sarcoma cell lines (A673, SK-N-MC, RDES), transfected with either siControl or siMYBL2. 2.44
Cooperation of dominant oncogenes with regulatory variants shapes clinical outcomes in pediatric cancer 2.44
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 2.43
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 1] 2.41
ATF4 inhibition by p62 represses stromal metabolic reprogramming and tumorigenesis II 2.41
RNA-seq analysis of RALD iPSCs after in vitro differentiation 2.4
Genome-wide profiling of siRNA targeting EWS-FLI1 in TC32 Ewing sarcoma cell line 2.4
Vitamin d receptor-mediated stromal reprogramming suppresses pancreatitis and enhances pancreatic cancer therapy 2.4
Targeted reactivation of FMR1 transcription in FXS embryonic stem cells 2.38
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice [HCT116_RNA-seq] 2.38
ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice 2.38
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] 2.38
Transcriptome sequencing of K-562 cells 2.37
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 2.37
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells 2.35
In vitro modeling of human germ cell development using pluripotent stem cells 2.34
FUS KO mRNA sequencing and anti-FUS RNA immunoprecipitation sequencing 2.33
SETBP1-WT and SETBP1-G870S transcriptional profiles [RNA-Seq] 2.33
SETBP1-WT and SETBP1-G870S epigenetic landscapes 2.33
Seletive inhibition of CDK9 in DLBCL cell lines 2.31
Global analysis of pre-mRNA subcellular localization upon splicing inhibition by spliceostatin A 2.31
RNA sequencing for human induced pluripotent stem cell cardiomyocyte differentiation 2.31
Global Gene Expression analysis of CUTLL1 cell lines after treatment with Perhexiline 2.29
High-efficiency RNA-based reprogramming of human primary fibroblasts 2.28
Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization  2.28
RNA-Seq Analysis of Anacardic Acid Treated MCF7 and MDA-MB-231 Breast Cancer Cell Lines 2.27
Mediator kinase inhibition further activates super-enhancer-associated genes in AML 2.27
Effect in HCT116 cells of 3hr cortistatin A treatment on gene expression. 2.27
Identification of a LIF-responsive replication-competent human β cell 2.26
Small molecule inhibition of ERK dimerization prevents tumorigenesis by Ras-ERK pathway oncogenes 2.24
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo 2.24
Transcriptome analysis of total RNA in human osteosarcoma cell line U2OS before and after inhibition of zinc finger protein ZNF768 2.24
Next Generation Sequencing of human SMA and healthy control Motor Neurons 2.24
Locally transplanted human urine-induced nephron progenitor cells contribute to renal repair in mice kidney with diabetic nephropathy 2.24
Characterisation of HIF-dependent alternative isoforms in pancreatic cancer 2.23
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia revealed by RNA-sequencing. 2.23
Overexpression of Claspin and Timeless protects cancer cells from replication stress in a checkpoint-independent manner 2.22
ARID1A regulates condensin II distribution and chromosomal partition 2.22
ARID1A regulates condensin II distribution and chromosomal partition [RNA-seq] 2.22
Genome-wide discovery of human splicing branchpoints 2.22
Identification of Resistance Genes to BRAF Inhibitor in Melanoma by piggyBac Transposon Activation Mutagenesis Screen 2.21
A non-catalytic function of carbonic anhydrase IX contributes to the glycolytic phenotype and pH regulation in human breast cancer cells 2.21
The Genetic Landscape of Diamond-Blackfan Anemia 2.2
ELF4 is a target of miR-124 and promotes neuroblastoma proliferation and undifferentiated state 2.2
Cap-specific terminal N6-methylation of RNA by an RNA polymerase II-associated methyltransferase. 2.18
Treatment of SW480 colon cancer cell induced xenografts with AZD and DBZ 2.17
Genetic Tagging During Human Mesoderm Differentiation Reveals Tripotent Lateral Plate Mesodermal Progenitors 2.17
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis [RNA-seq] 2.17
MKL1 augments megakaryocyte maturation by enhancing the SRF regulatory axis 2.17
Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection 2.17
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 2.17
RNA-Seq of cKIT+ sorted cells from 53-137 day old fetal testes and ovaries and RNA-Seq of TRA-1-81+ H1 and UCLA1 hESCs. 2.15
cKIT+ sorted cells from 57-137 day old fetal testes and ovaries 2.15
Cis-SAGe fusion RNAs in transcription splicing factors knocking-down 293T cells 2.12
Polysome-associated mRNA profiling of cancer cells in response to CXCL12 and IGF1 2.11
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines 2.1
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 2.1
Stochastic genome - nuclear lamina contacts are linked to histone H3K9 dimethylation (RNA-seq data) 2.09
Stochastic genome - nuclear lamina contacts are linked to histone H3K9 dimethylation 2.09
AhR activity directs BRAF inhibitors resistance in metastastic melanoma 2.08
UBC9 knockdown in bladder cancer T24 cell lines 2.06
The RNA binding protein IGF2BP3 promotes hematopoietic progenitor cell proliferation by targeting leukemogenic pathways 2.05
RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins 2.03
Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of BET inhibitor JQ1 2.02
Homolog-selective degradation as a strategy to probe the function of CDK6 in AML 2.01
Controlling for gene expression changes in transcription factor protein networks. 2.0
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line 2.0
B-cell activating factor (BAFF) stimulation of Burkitt Lymphoma cell line [RNA-Seq] 2.0
RNA-Seq analysis of JIB-04 effects on global cellular transcription and HIV in 2D10 T cells 2.0
A map of gene expression in neutrophil-like cell lines 2.0
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 1.99
A Stable Transcription Factor Complex Nucleated by Dimeric AML1-ETO Controls Leukaemogenesis 1.99
Integrin signaling regulates YAP/TAZ to control skin homeostasis 1.98
Gene expression signatures of innate lymphoid cells from human blood 1.98
HIV-1 perturbs homeostatic ILCs, unmasks ILC1 plasticity, and boosts TCF7+ memory NK cells 1.97
RNA-seq of YB5 cells treated with Proscillaridin A 1.97
Bromodomain and extraterminal proteins foster the core transcriptional regulatory programs and confer vulnerability in liposarcoma (RNA-Seq) 1.97
Bromodomain and extraterminal proteins foster the core transcriptional regulatory programs and confer vulnerability in liposarcoma 1.97
Genome wide characterization of a STAT1-independent antiviral and immunoregulatory transcriptional program induced by IFNβ and TNFα reveals non-canonical STAT2 and IRF9 pathways 1.96
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (RNA-seq dataset) 1.94
RNA-seq of cells with TET1 knockout 1.91
mRNA-seq from Nutlin-3a, doxorubicin, and DMSO treated HCT116 p21-/- cells 1.88
Determination of tRNA aminoacylation levels by high throughput sequencing 1.88
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [RNA-Seq] 1.87
Direct identification of endogenous SMG6 targets and a preferred motif spanning SMG6 cleavage sites by parallel analysis of RNA ends in human cells 1.87
SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression 1.86
Single-Cell RNA Sequencing Reveals Metallothionein Heterogeneity during hESC Differentiation to Definitive Endoderm [RNA-Seq] 1.85
The acetyllysine reader BRD3R promotes human nuclear reprogramming and regulates mitosis 1.85
Targeting HuH7 cells with JumonjiC Lysine Demethylase Inhibitors (RNA-Seq) 1.84
Transcriptome Analysis of CircMRPS35 mediated mRNA expression profiles 1.82
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit 1.82
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 1.8
Human Cactin interacts with DHX8 and SRRM2 to assure efficient pre-mRNA splicing and sister chromatid cohesion. 1.78
SLIGRL-induced gene expression changes in NHEK cells 1.77
Image based identification and targeting of cancer stem cells in pancreatic adenocarcinoma (PDAC) 1.77
Effect of PRDM11 depletion in U2932 cells 1.72
mRNA profiles of JMJD3 overexpression- and JMJD3 knockout- HL-60 cells 1.72
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies [RNA-seq data set 2] 1.72
Tracking transcriptional changes in a species-specific manner during experimental hepatoblastoma progression in vivo 1.7
Next Generation Sequencing Facilitates Quantitative Analysis of transcriptomes of human cord blood CD34+ cells treated with HDAC5 inhibitor 1.7
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 1.69
A novel compound that blocks HIV-1 replication inhibits the splicing regulatory function of SRSF10 1.68
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation [bulk] 1.68
Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition 1.68
Smad5 acts as an intracellular pH messenger and maintains bioenergetic homoeostasis 1.67
Downregulation of LATS kinases alters p53 to promote cell migration 1.66
Comparison of single-cell transcriptomics quality between unfixed cells and cells that were fixed and mock stained according to the RAID procedure 1.65
Gene expression changes after LOC550643 silencing 1.63
HEK293 Heat-shock experiment 1.62
A TGFbeta-PRMT5-MEP50 Axis Regulates Cancer Cell Invasion through Histone H3 and H4 Arginine Methylation Coupled Transcriptional Activation and Repression 1.61
Ribosome profiling upon inhibition of eIF4A 1.61
Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain 1.61
PRMT5 Interacts with the BCL6 Oncoprotein and is Required for Germinal Center Formation and Lymphoma Cell Survival 1.6
Transcriptome-wide identification of CELF2 functional targets in T cells 1.59
FOXP3 protects conventional human T cells from premature restimulation-induced cell death 1.58
Differential expression analysis of RNA-seq data from melanocytes driven by tumor cell-derived exosomes 1.55
DDX3X regulation of global translation is impaired by medulloblastoma-associated mutations 1.54
DDX3X regulation of global translation is impaired by medulloblastoma-associated mutations [RNA-Seq] 1.54
Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes—GMUCT 2.0 1.54
Transcriptional responses of melanoma cells to BRAF inhibition 1.53
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 1.52
Transcriptome splicing analysis in K562 cells expressing rare and private spliceosomal mutations 1.51
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex (RNA-Seq I) 1.48
Recapitulating and Deciphering Tumor-stroma Microenvironment by Using a “LEGO” like 3D printed microfluidic device 1.47
Interleukin-1β induces mitochondrial DAMP production to activate STING-dependent innate immune programs 1.46
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 1.43
Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics 1.43
LEDGF and HDGF2, histone H3K36 methyl-binding proteins that assist RNA polymerase II transcription through nucleosomes 1.38
Transcriptional profiling of LS1034 cells treated with tepoxalin 1.37
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 1.37
RNAseq Study in CC-671 Treated Cal-51 Cells 1.36
Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid 1.36
RNA isoform screens reveal the essentiality and tumor suppressor activity of ultraconserved poison exons 1.36
An optimization system for isolating and sequencing of single human colon cancer cells 1.36
Evidence for rRNA 2'-O-methylation plasticity: control of intrinsic translational capabilities of human ribosomes 1.33
SLAM-seq for K562 endogenous mRNA decay 1.32
KLF4 as a rheostat of osteolysis and osteogenesis in prostate tumors in the bone 1.31
Inhibition of TAZ contributes radiation-induced senescence and growth arrest in glioma cells 1.29
Pseudouridylation of tRNA-derived fragments steers translation control in stem cells [Polysome-Seq] 1.28
A20 regulates canonical wnt-signaling through an interaction with RIPK4 1.25
β-Caryophyllene Enhances the Transcriptional Upregulation of SREBP-dependent Lipid Biosynthesis in Breast Cancer Cells 1.25
Human Embryoid Body Transcriptomes Reveal Maturation Differences Influenced by Size and Formation in Custom Microarrays 1.25
Nudt3 is a mRNA Decapping Enzyme That Modulates Cell Migration 1.25
Epigenetic reprogramming of melanoma cells by vitamin C treatment 1.24
Genome-wide profile of cJun and p27 and gene expression profile in breast cancer cells 1.21
Gene expression profile in breast cancer cells 1.21
The p30 isoform of CEBPA uncovers a silent enhancer to drive the expression of the tumor promotive factor CD73 in CEBPA mutant AML 1.21
PolyA+ RNA-seq in ALL-SIL upon TLX1 knockdown 1.21
CAR T cell trogocytosis and cooperative killing regulate tumour antigen escape 1.19
Mutant KRAS/BRAF Reprograms the Enhancer Landscape via GATA1 to Drive Chemoresistance 1.18
Oncogenic MYC induces a dependency on the spliceosome in human cancer 1.18
Role of COP1 on MAP kinase transcriptional output in melanoma 1.15
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo [RNA-seq] 1.15
The hematopoietic master transcription factor PU.1 requires its interaction with the SWI/SNF remodeler to access chromatin de novo 1.15
Isolation and sequencing of AGO-bound RNAs reveals characteristics of stem-loop processing in vivo 1.15
RNA-seq analysis of control and CDK12-depleted ovarian cancer cells 1.15
RNA-seq of HDAC2-disrupted 293FT cells by CRISPR-Cas9 1.11
Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma 1.11
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 1.1
Transcriptomic analysis of ERR alpha orphan nuclear receptor 1.1
Discovery of Drug Candidates that Inhibit and Eliminate Zika Virus Infection in Fetal and Adult Brain 1.09
Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq 1.08
High capacity of the endoplasmic reticulum to prevent secretion and aggregation of amyloidgenic proteins 1.07
Global transcriptome analysis in the MYCN-amplified neuroblastoma cell line IMR5-75 upon inducible MYCN-knockdown 1.06
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 1.04
Transcriptome-wide analysis links the short-term expression of the b isoforms of T-cell intracellular antigens to protective proteostasis-mediated survival and quiescence 1.02
Domain-focused CRISPR-screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells 1.01
Global host gene expression changes in KSHV+ PEL cells upon KSHV reactivation 1.0
CRISPR activation of long non-coding RNAs transiently expressed during cortical neuron differentiation associated with Field, et al, Stem Cell Reports 2018 0.99
Cell cycle dynamics of human pluripotent stem cells primed for differentiation 0.99
RNA-seq of HEK293T cells overexpressing TET1-FL or TET1-ALT 0.97
Human TFIIH kinase CDK7 regulates transcription-associated epigenetic modification 0.96
Global hypomethylation mediated changes regulate constitutive PD-L1 expression in melanoma 0.96
Global hypomethylation mediated changes regulate constitutive PD-L1 expression in melanoma [RNA-Seq] 0.96
RNA sequencing analysis of selumetinib-resistant CRC cells lines 0.96
The transcriptome and chromatin accessbility landscape of mammalian germline 0.95
Functional significance of the HIV-1 Tat signature amino acid residues 0.93
Gene expression changes due to PARP knockdown in human cells 0.91
Single-Cell Genotyping of Transcriptomes 0.91
RNA-seq of Single-Cell Genotyping of Transcriptomes 0.91
RNA sequence of mRNA in HUVEC cells after depleting EGFL6 0.91
The LRF/ZBTB7A transcription factor is a BCL11A-independent repressor of fetal hemoglobin 0.89
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation 0.88
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation [bulk RNA-Seq] 0.88
The Polycomb Repressor Complex 1 Drives Double-Negative Prostate Cancer Metastasis by Coordinating Stemness and Immune Suppression 0.87
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 0.86
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression 0.85
Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies 0.85
Comparative Analysis of Cas9 Activators Across Multiple Species 0.84
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) 0.83
Transcriptome analysis of V336Y mutant mitochondrial ribosomal protein in human HEK293 cell line 0.83
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HEK293 cells treated with or without TNF-alpha 0.81
6mer seed toxicity in tumour suppressive microRNAs 0.81
Human Treg IL-12 stimulation 0.79
single cell RNA-seq from GM12878 (ENCSR673UIY) 0.79
SQSTM1/p62-directed metabolic reprogramming is essential for normal neurodifferentiation 0.78
Analysis of human ES cell differentiation establishes that the dominant isoforms of the lncRNAs RMST and FIRRE are circular 0.77
Epigenome Editing by a CRISPR/Cas9-Based Acetyltransferase Activates Genes from Promoters and Enhancers 0.77
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures [RNA-Seq] 0.75
Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures 0.75
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 0.75
CD48-dependent protective autophagy in conventional human T cells promotes restimulation-induced cell death resistance 0.74
KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression 0.74
Transcriptome profiling of H1-iCas9 cells grown on laminin and on MEFs 0.71
miR-126 Orchestrates an Oncogenic Program in B-Cell Precursor Acute Lymphoblastic Leukemia 0.71
Systematic discovery of endogenous human ribonucleoprotein complexes 0.7
RNA-Seq analysis of Head and Neck Squamous cell carcinoma cell-lines 0.7
TALEN-based knockout of mir-141 and mir-200c in SK-BR-3 cells 0.7
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq) 0.69
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships 0.69
Treatment of prostate cancer cells with S-adenosylmethionine leads to genomewide alterations of transcription profiles 0.69
Transcriptomic analysis of iPSC and ESC challenged with atmospheric or physiological oxygen 0.68
Role of BET proteins in YAP/TAZ-dependent transcription [RNA-seq 2] 0.67
RNA-sequencing analysis of glucose and acetate regulated transcripts in glioblastoma cells 0.66
Ewing sarcoma resistance to SP-2509 is not mediated through KDM1A/LSD1 mutation II 0.63
Human Treg NaCl stimulation 0.61
Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells 0.61
GATA2 is Dispensable for Generation of Hemogenic Endothelium But Required for Endothelial-to-Hematopoietic Transition 0.61
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo 0.61
CRISPR Display: A modular method for locus-specific targeting of long noncoding RNAs and synthetic RNA devices in vivo [RNA-Seq] 0.61
Impact of library preparation on downstream analysis and interpretation of RNA-seq data: comparison between Illumina PolyA and NuGEN Ovation protocol 0.6
MYC interacts with the G9a histone methyltransferase to drive transcriptional repression and tumorigenesis 0.6
Derivation of kidney organoids from human pluripotent stem cells [RNA-Seq: Data Set 2] 0.59
Low MITF/AXL ratio predicts early resistance to multiple targeted drugs in melanoma 0.57
Single-cell analysis of human kidney organoids 0.57
Isolation and Functional Interrogation of Adult Human Prostate Epithelial Stem Cells at Single Cell Resolution 0.54
Acquired resistance to MEK-CDK4/6 inhibitor combinations in cutaneous melanoma 0.52
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells 0.51
Modulation of nonsense-mediated decay by rapamycin 0.5
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells [Endoderm RNA-seq and ChIP-seq data sets] 0.48
Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells 0.48
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration [RNA-seq2] 0.47
HBEC-shp53-PCHD7 0.47
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 0.46
Gene expression profiles in HMC3 cells after exposure to ketamine or its active metabolites: 2R6R-HNK and 2S6S-HNK 0.45
Role of FGFR1 in neuronal devlopment 0.45
RNA-seq expression data from FL-HSPCs after HOXA7 knockdown 0.44
The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq2] 0.44
transcriptomic profiling of HEK293 cells upon individual knockdown of the splicing factors RBM17, U2SURP or CHERP 0.43
eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants 0.43
RNA-seq data 0.42
Transcriptional landscape changes during human embryonic stem cell derivation 0.41
DNMT1-associated long non-coding RNA regulate global gene expression and DNA methylation in colon cancer 0.39
Transcriptome profiling (RNA-seq) of CREBBP+/+ and CREBBP+/- clones of U2932 DLBCL cell line 0.39
Transcriptional study of ARN8 cells treated with novel DHODH inhibitors 0.37
SMAD2/3 are redirected to novel sites in MCF10A MII after prolonged TGFβ stimulation 0.35
JUNB is a critical AP1 component for SMAD2/3 binding after TGFβ stimulation [RNA-seq] 0.35
Transcriptional Down-regulation of CCR5 in a Subset of HIV+ Controllers 0.35
Transcriptional Down-regulation of CCR5 in a Subset of HIV+ Controllers (RNA-Seq) 0.35
Gene expression in TAL1-driven T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment 0.34
T-cell ALL in response to TAL1-KD, UTX-KD, and GSKJ4 treatment 0.34
Generation and persistence of human tissue-resident memory T cells in lung transplantation 0.33
RNA sequencing of isogenic BRCA2 haploinsufficient vs. wild-type T-ALL cells 0.32
RNA-seq expression data from EB-HSPC after AM580 treatment compated to DMSO-trated and FL-HSPCs 0.32
Whole transcriptome profile of citrulline-specific B cells from patients with rheumatoid arthritis 0.32
Transcriptomics analysis of gene expression in normal and YTHDC1, SRSF1, SRSF3, SRSF7, SRSF9 or SRSF10 deficient human HeLa cells 0.31
Concomitant BCORL1 and BRAF mutations in vemurafenib-resistant melanoma cells 0.31
Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing 0.31
Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations [RNA-seq] 0.3
Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations 0.3
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 0.29
Identification of trans regulators of ADAR and A-to-I RNA editing using RNA-seq 0.28
Unbiased identification of trans regulators of ADAR and A-to-I RNA editing 0.28
Poly(ADP-ribose) polymerase 1 is necessary for coactivating hypoxia-inducible factor-1-dependent gene expression by Epstein-Barr virus latent membrane protein 1 0.27
A Non-Canonical Nuclear Activity Triggered by Small RNAs and Argonaute Proteins in Human Cells 0.21
KDM1A confers invasive and metastatic attributes in lung adenocarcinoma by modulating a non-canonical Integrin ß3-KRAS signaling pathway 0.19
MicroRNA-28 replacement for non-Hodgkin lymphoma therapy 0.18
Transcriptional profile in human S. haematobium infection 0.18
HSB-2 cells stably expressing LDB1 or mutant LDB1 proteins 0.18
CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia 0.18
Interactome (iCLIP) and Translatome ( Polysome profiling) of Musashi 2 (MSI2) targets in K562 0.17
Targeted differentiation of regional ventral neuroprogenitors and related neuronal subtypes from human pluripotent stem cells 0.17
Lung adenocarcinoma metastasis is suppressed by the alveolar lineage transcription factors GATA6 and HOPX. 0.17
Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors [Modifications - screen] 0.16
Sirt6 Oncogene Mediates PI3K/Akt Signaling Activation in Diffuse Large B-Cell Lymphoma 0.15
Human naïve pluripotent stem cells exhibit X chromosome dampening and X-inactivation (RNA-Seq) 0.15
A comprehensive single cell transcriptional landscape of human hematopoietic progenitors 0.13
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 0.12
Human Treg IFNg/IL-10 subpopulations 0.12
PolyA-sequencing in IMR-32 neuroblastoma cells with shRNA mediated depletion of CDK12, CDK13 or GFP. 0.12
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 0.12
Direct Isolation and Characterization of Human Nephron Progenitors. 0.12
RNA deep sequencing analysis of glioma stem cells(GSCs) and non-GSCs 0.11
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation 0.11
RNA-Seq of SHEP TET21N cells upon Doxorubicin treatment 0.1
GLIS3 Transcriptionally Activates WNT Genes to Promote Differentiation of Human Embryonic Stem Cells to Posterior Neural Progenitors 0.09
p53 activity results in DNA replication fork processivity 0.09
Global transcriptome analysis of WT versus HEB-/- hESCs 0.09
Oncogenic roles of ARID5B in T-ALL 0.07
RNA-seq analysis in knockdown Jurkat samples for each factor of TAL1 complex 0.07
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates 0.06
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates [RNA-seq] 0.06
The Small Molecule ISRIB Reverses the Effects of eIF2α Phosphorylation on Translation and Stress Granule Assembly 0.04
Zika virus infection reprograms global transcription of host cells to allow sustained infection 0.04
Function and hormonal regulation of GATA3 in human first trimester placentation 0.04
Effect of BB608 on Gene Expression in HNSCC Cell Line 0.03
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells 0.03
Widespread regulated alternative splicing of single codons accelerates proteome evolution 0.02
WNT signaling memory is required for ACTIVIN to function as a morphogen 0.01
Maternal-biased H3K27me3 correlates with paternal-specific gene expression in the human morula 0.01


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