Gene Query: TMEM11

Dataset Description Geneva Score
Effects of Cardiac Glycosides on RNA Expression in Prostate Cancer LNCaP-abl Cells 59.46
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 33.75
Prostate Cancer Cell RNA-Seq (PC3E and GS689.Li) 32.1
ADAR1 controls apoptosis of stressed cells by inhibiting Staufen-mediated mRNA decay 26.31
PolyA-sequencing in IMR-32 cells treated with THZ531 or DMSO 19.15
Gene expression profiling of neural crest progenitor cultures derived from human embryonic stem cells carrying nonsense mutations in the Polycomb gene ASXL1 [HET] 18.02
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression 17.96
m6A-seq data analysis of control and PCIF1 knockdown transcriptome 14.83
3’READS+, a sensitive and accurate method for 3’ end sequencing of polyadenylated RNA 14.69
Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells 13.59
DART-seq: an antibody-free method for global m6A detection 12.05
ABCB5 is activated by MITF and b-catenin and is associated with melanoma differentiation 12.02
Cleavage Factor Im as a key regulator of 3’ UTR length 10.6
Medial Ganglionic Eminence and Cortical Organoids Model Human Brain Development and Interneuron Migration 10.0
Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq 9.78
Mutant p53 controls tumor metabolism and metastasis by regulating PGC-1α 9.77
Polysome-associated mRNA profiling of cancer cells in response to CXCL12 and IGF1 9.53
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 9.46
HNF1A deficiency impairs β-cell fate, granule maturation and function 8.7
H3B-8800, a novel oral splicing modulator, induces lethality in spliceosome mutant cancers [Nalm-6] 8.44
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response 8.32
The SPOP-containing Complex Functions as an E3 Ligase for SETD2 to Regulate Gene-Specific H3K36me3-Coupled Alternative Splicing 8.24
Gene expression in control and DOCK8 CRISPR KHYG1 NK cells 8.2
An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates 8.01
High RNA polymerase II occupancy on herpes simplex virus 1 late genes early in infection suggests progression to elongation is a critical switch to trigger late viral gene expression 7.97
MOV10 Is a 5' to 3' RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3'UTRs 7.87
MOV10 Is a 5' to 3' RNA Helicase Contributing to UPF1 mRNA Target Degradation by Translocation along 3'UTRs (expression) 7.87
Sequencing Universal Human Reference RNA by Smart-seq and early barcoding library preparation methods 7.69
Transciptome profiling of NoDice and RNaseIII null cells prior to and after polyIC treatment 7.38
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia 7.1
Genes significantly down or Up-regulated upon RNF219 knockdown. [RNA-Seq] 6.95
Cell-to-cell variation in defective virus expression and effect on host response during influenza virus infection 6.94
Alternative splicing of differentiated myeloid cell transcripts after infection by Anaplasma phagocytophilum impacts a selective group of cellular programs 6.9
RNAseq of CCRF-CEM, a T-cell acute lymphoblastic leukemia cell line, after knockdown with 2 control hairpins and 6 hairpins targeting the PRC2 complex. 6.81
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (RNA-seq dataset) 6.81
NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation 6.73
Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of BET inhibitor JQ1 6.69
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells 6.66
Measuring the effect of MYC on transcription during the DNA double-strand break response by RNA-seq of newly synthesized transcripts 6.58
scRNASeq analysis of cycling cardiomyocytes 6.34
EWSR1 influences alternative splicing through direct and indirect mechanisms 6.33
Genome-wide analysis of YAP and TFCP2 down-regulated genes in liver cancer cells 6.26
Genome-wide analysis of YAP and TFCP2 occupancy and regulated expression in liver cancer cells 6.26
Impact of DNA MMR activity on antiviral gene expression in H441 cells infected with influenza A virus 6.08
Assessing the effect of SUPT4H1 RNAi on the transcription of a repeat-containing reporter construct 6.04
SETBP1-WT and SETBP1-G870S epigenetic landscapes 5.97
SETBP1-WT and SETBP1-G870S transcriptional profiles [RNA-Seq] 5.97
Poly(A)-ClickSeq resolves CF25-mediated alternative poly-adenylation, HeLa 5.91
Sequential regulatory loops as key gatekeepers for neuronal reprogramming in human cells 5.77
Sequential regulatory loops as key gatekeepers for neuronal reprogramming in human cells [RNA-seq] 5.77
GDF6-induced BMP signaling reawakens a neural crest identity in melanoma to prevent cell death and differentiation 5.67
Differential gene expression of human melanoma cells [RNA-seq] 5.67
miRNAs affected by antagomiR-17 treatment 5.66
Transcriptomic analysis of senescent cells upon PTBP1 knockdown and EXOC7 knockdown 5.66
mRNA expression in iPS cells generated by a synthetic self-replicative RNA 5.5
A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters 5.34
hnRNP C is a key regulator of protein synthesis in mitosis 5.3
BAF controls genome accessibility 5.28
Poly(ADP-ribosyl)ation dependent changes in CTCF-chromatin binding and gene expression in breast cells 5.28
Quantitative Analysis of p53 and/or TGFBR2 Knockdown Endothelial Transcriptomes after Irradiation 5.18
RNA-seq data corresponding to: AZD4573 is a highly selective CDK9 inhibitor that suppresses Mcl-1 and induces apoptosis in hematological cancer cells 5.17
RNA transcriptome analysis of IRF1 and IRF3 knockout in immortalized primary hepatocytes infected with hepatitis A virus 5.04
Human Adipocytes Regulate Gene Expression in Triple-negative Breast Cancer Assessed by NGS Sequencing 5.02
Disrupted prenatal RNA processing and myogenesis in congenital myotonic dystrophy 5.0
Recruiting Endogenous ADARs with Antisense Oligonucleotides to Reprogram the Transcriptome 4.97
CROP-Seq in Primary Human T Cells 4.95
High-throughput sequencing of PROMPT-enriched samples. 4.95
RNA-seq analysis of human cardiosphere cells with different tubule supportive potential 4.88
RNA-Seq of cKIT+ sorted cells from 16-16.5 week old fetal testes and ovaries and RNA-Seq of TRA-1-60+ H1 hESCs 4.86
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 4.82
Proteinase-Activated Receptor 4 (PAR4) mediates cell membrane blebbing in a Gaq/11, Gai independent, RhoA and ß-arrestin-dependent manner. 4.77
MEF2C phosphorylation is required for chemotherapy resistance in acute myeloid leukemia [inhibitor MRT199665] 4.73
Impact of dieldrin on transcription in Jurkat T cells 4.69
COMBINING BET AND MEK INHIBITORS SYNERGISTICALLY TARGETS NRAS MUTANT MELANOMA 4.67
Effects of NSUN2 deficiency on the mRNA 5-methylcytosine modification and gene expression profile in HEK293 cells (RNA-Seq) 4.65
YTHDF1 Amplifies Wnt/β-Catenin Signaling to Promote Intestinal Stemness 4.64
Generating Patterned Kidney Organoids for Studying Development and Diseases 4.51
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (human 3' mRNA-seq) 4.47
Pre-mRNA Splicing is Facilitated by an Optimal RNA Polymerase II Elongation Rate 4.46
RNAseq Study in CC-671 Treated Cal-51 Cells 4.44
Unique features and clinical importance of acute alloreactive immune responses 4.44
Co-regulation of splicing by Rbfox1 and hnRNP M [hnRNPM k-d+Rbfox1 RNA-Seq] 4.4
Co-regulation of splicing by Rbfox1 and hnRNP M 4.4
Transcriptomic analysis of human tonsillar TFH subsets 4.36
RNAseq of CD8+ and CD8- MAIT cells in human peripheral blood 4.33
Unbiased evaluation of cell-free amniotic fluid transcriptome of term and preterm infants to detect fetal maturity 4.32
Human serum and heparin-free platelet lysate as appropriate xeno-free alternatives for production of human MuStem cell batches 4.29
Gene expression and 4sUDRB-seq for NF90/NF110 of human scramble and KD HeLa cells. 4.22
Effect of PRDM11 depletion in U2932 cells 4.17
RNA-seq analysis to identify the genes regulated by p53-SET interplay 4.16
Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability? 4.15
The effect of Foxc1 deficiency on undifferentiated and differentiated human primary keratinocytes 4.13
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process 4.13
Cockayne syndrome A and B proteins regulate the transcription arrest upon genotoxic stress through a ubiquitin/proteasome degradation process (RNA-seq) 4.13
snRNAs as regulators of alternative splicing 4.12
The evolution of N6-methyladenosine in primates 4.05
Interaction with WDR5 recruits MYC to a small cohort of genes required for tumor onset and maintenance 4.01
A rare subpopulation of melanoma cells with low expression of metastasis suppressor NME1 has a neural crest-like phenotype and is highly metastatic in vivo 3.99
Comprehensive comparative analysis of 5’ end RNA sequencing methods 3.96
RNA-seq analysis of uveal melanoma cells treated with FR900359 3.94
Analysis of HPV16 E2 host gene expression using TERT immortalized keratinocytes (NOKs) cell lines and RNA-sequencing 3.86
A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance 3.84
Single-cell RNA Sequencing Resolves Spatiotemporal Development of Pre-thymic Lymphoid Progenitors and Thymus Organogenesis in Human Embryos 3.83
Nickel induced transcriptional changes persist post exposure through epigenetic reprograming (ChIP-seq & RNA-seq datasets) 3.79
Sequencing of messenger RNAs with N6-methyladenosine modifications in acute myeloid leukemia (AML) with and without forced expression of FTO 3.76
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection (RNA-sequencing) 3.73
Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection 3.73
LncRNA-GAS5 negative regulation of YAP-target genes expression 3.71
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development [set 1] 3.7
Gene expression profiling by RNA-seq in hTert-HME1 cell line treated with control or BRCA2 siRNAs and grown with or without EGF (epithelial growth factor) 3.66
Food-derived Compounds Apigenin and Luteolin Modulate mRNA Splicing of Introns with Weak Splice Sites 3.64
Super-Enhancers Promote Transcriptional Dysregulation in Nasopharyngeal Carcinoma 3.61
Super-Enhancers Promote Transcriptional Dysregulation in Nasopharyngeal Carcinoma [RNA-seq] 3.61
Silencing p300 in MCF7 cells to study expression and alternative splicing 3.59
Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity 3.55
Global analysis of enhancer targets: Mosaic-seq 3.55
Reversible LSD1 Inhibition with HCI-2509 induces the p53 gene expression signature in high-risk neuroblastoma cells 3.55
Hypoxic regulation of transcription in HUVEC is mediated by EPAS1 3.53
Genes significantly down or Up-regulated upon RNF219 knockdown 3.51
Nascent RNA Sequencing after NMYC activation in SH-EP MYCNER cells 3.46
Transcriptomic analyssis following EHMT1/2 inhibition 3.45
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 3.44
Peptidomimetic blockade of MYB in acute myeloid leukemia 3.41
Peptidomimetic blockade of MYB in acute myeloid leukemia [RNA-seq] 3.41
High-throughput sequencing of pluripotent cells 3.4
Propargite, an environmental chemical, interacts with GWAS identified diabetes genes to impact human pancreatic β-cell death 3.4
A novel lncRNA lncRNA-AK096729 promotes colorectal carcinogenesis and glucose metabolism by stabilizing and specifying the transcription modification pattern of c-Myc 3.38
RNA sequence of mRNA in HUVEC cells after depleting EGFL6 3.37
Ex-vivo Human Hematopoietic Stem Cell Expansion Requires Coordination of Cellular Reprogramming with Mitochondrial Remodeling and P53 Activation 3.35
KRASG12C inhibition produces a driver-limited state revealing collateral dependencies 3.32
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes 3.32
Identification of renal resident macrophages across species [C1] 3.27
Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells 3.26
Transcriptional profiling of microglia; current state of the art and future perspectives 3.25
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 3.25
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 3.21
Acquired resistance to MEK-CDK4/6 inhibitor combinations in cutaneous melanoma 3.19
Gene expression analysis of the impact of TDP-43 knockout in human cells. 3.16
RNA-Seq of polysome profiling fractions and whole cell lysates of UVB-irradiated N-TERT keratinocytes 3.13
Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 3.11
Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 3.11
TWIST1-induced microRNA-424 drives an intermediate epithelial-to-mesenchymal transition that opposes metastasis 3.09
High-Throughput Kinetic Analysis of Fractional Killing 3.06
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability 3.06
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability [RNA-seq] 3.06
Gene expression profiling of patient's DCIS-IDC tandem lesions by RNA sequencing analysis 3.06
Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation 3.04
Detection of internal N7-methylguanosine (m7G) RNA modifications by mutational profiling sequencing 3.03
Histone Demethylase-Assisted Somatic Cell Nuclear Transfer Facilitates Derivation of Human Pluripotent Stem Cells 3.01
LSD1 mediates AKT activity in PIK3CA mutant colorectal cancer [RNA-Seq] 2.99
LSD1 mediates AKT activity in PIK3CA mutant colorectal cancer 2.99
Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 2.98
Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 [RNA-seq] 2.98
The comparison of high-throughput single-cell RNA-seq methods 2.97
The ribosomal prolyl-hydroxylase OGFOD1 decreases during cardiac differentiation, modulates translation and spliceosomal processes 2.93
RNA-Sequencing of human dermal lymphatic endothelial cells (HDLEC) treated with siRNA targeting YAP/TAZ and YAP5SA 2.92
m6A-dependent regulation of messenger RNA stability 2.9
Oncogenic MYC induces a dependency on the spliceosome in human cancer 2.88
Effect of drugs on transcriptomic profiles 2.85
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 2.83
RNA-seq analysis of control and Myc-induced U2OS cells 2.83
Transcriptomic analysis of cultured corneal endothelial cells as a validation for their use in cell-replacement therapy 2.83
Identification of renal resident macrophages across species 2.83
Gene expression profiles of 4-1BB+PD-1-high, 4-1BB-PD-1-high, and PD-1-int tumor-infiltrating CD8 T cells in hepatocellular carcinoma 2.82
Transcriptome splicing analysis in K562 cells expressing rare and private spliceosomal mutations 2.79
Divergent effects of eRF3 and Upf1 on the expression of uORF carrying mRNAs and ribosome protein genes 2.79
A transcriptional regulatory network connects mitochondrial biogenesis and metabolic shift with stem cell commitment to hepatic differentiation 2.73
Major roles of cyclobutane pyrimidine dimers, nucleotide excision repair and ATR in the alternative splicing response to UV irradiation 2.73
RNA-sequencing time course of Human Intestinal Epithelial Cells (HIECs) following knockdown of miR-30bcd using complementary locked nucleic acids 2.7
Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer 2.7
A549 cell transcriptome responses to infection with H7N9 influenza virus 2.69
Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity 2.67
Effect in HCT116 cells of 3hr cortistatin A treatment on gene expression. 2.66
Mediator kinase inhibition further activates super-enhancer-associated genes in AML 2.66
CD73 knockdown effect in pancreatic cancer cell lines 2.66
Functional Inflammatory Profiles Distinguish Myelin-Reactive T Cells from Patients with Multiple Sclerosis 2.65
β-catenin/Tcf7l2 dependent transcriptional regulation of GLUT1 gene expression by Zic family proteins in colon cancer 2.61
Global loss of epigenetic and transcriptional fidility defines a subclass of cancer with immunotherapy resistance 2.6
CXCR4 is a host factor that regulates Plasmodium development in hepatocytes 2.59
Pseudotime Ordering of Single Human Beta-Cells Reveals States of Insulin Production and Unfolded Protein Response 2.57
Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer 2.56
Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (RNA-seq) 2.56
Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD) 2.56
Sensitivity and engineered resistance of myeloid leukemia cells to BRD9 inhibition (RNA-seq) 2.55
Sensitivity and engineered resistance of myeloid leukemia cells to BRD9 inhibition 2.55
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes [RNA-Seq] 2.55
DNA breaks and chromatin structural changes enhance the transcription of Autoimmune Regulator target genes 2.55
Single-cell RNA sequencing-based CRISPRi screening resolves molecular drivers of early human endoderm development 2.55
Regulation of highly expressed hCINAP on translatome 2.54
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (ALK) 2.53
Heterozygous p53-R280T mutation promotes proliferation of NPC cells through activating PI3K/Akt signaling pathway 2.52
Exercise-induced transcriptome changes in skeletal muscle adapted to aerobic training 2.52
Effect of FGF13 depletion on the H460 cell line 2.5
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration 2.49
Distinct regulation of alternative polyadenylation and gene expression by nuclear poly(A) polymerases 2.49
Next-generation sequencing of human dermal fibroblasts transdifferentiated towards the otic lineage 2.47
Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on PANC1 cells treated with CoCl2) 2.46
Transcriptomics analysis of gene expression in normal and METTL3 or WTAP deficient Human HeLa cells 2.45
Gene target specificity of the Super Elongation Complex (SEC) family: How HIV-1 Tat employs selected SEC members to activate viral transcription 2.44
RNA-sequencing and MeDIP-sequencing of shSRC-1 and shNT tamoxifen treated LY2 cells 2.39
RNA-sequencing of shSRC-1 and shNT tamoxifen treated LY2 cells 2.39
Microenvironmental-derived Regulation of HIF-Signaling Drives Transcriptional Heterogeneity in Glioblastoma Multiforme 2.39
DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats 2.38
The effects of chemokines CCL2/7 on MDA-MB-231-FOXC1 cells 2.37
Investigsting the role of NF-ĸB p50 S80 phosphorylation in regulating TNFα-induced transcription in HEK293T cells 2.35
Silencing SPIB in attached and floating state of H1703 lung cancer cells 2.31
Protein kinase A-mediated phosphorylation regulates STAT3 activation and oncogenic EZH2 activity 2.31
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 2.3
BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq] 2.3
HEK293 Heat-shock experiment 2.3
RNA expression in primary huamn muscle cells treated with 1,25(OH)2D3 or vehicle 2.29
mRNA and miRNA expression in primary human muscle cells treated with 1,25(OH)2D3 or vehicle 2.29
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex 2.28
Defective transcription elongation in a subset of cancers confers immunotherapy resistance (human cell lines RNA-Seq) 2.27
Functional role of CPPED1 in trophoblasts. 2.26
RNA-Seq in two Ewing sarcoma cell lines: A673 and SKNMC 2.25
Generation and persistence of human tissue-resident memory T cells in lung transplantation 2.25
Polysome profiling RNAseq of cells transfected with an oligonucleotide targeting the ES6S region of the 40S subunit 2.24
Human HAP1 cells before and after nutrient deprivation 2.23
Transcriptomic profiling of human HAP1 cells before and after nutrient deprivation 2.23
Gene expression changes in HSV-1 infected HeLa cells with knockdown of B2M 2.22
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21 (RNA-Seq) 2.22
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21 2.22
PolyA-sequencing in Kelly and Kelly E9R neuroblastoma cells treated with THZ531 or DMSO 2.21
Neonatal and adult human testis defined at the single-cell level 2.21
To investigate the decay constants (half-lives) of transcript isoforms generated by alternative polyadenylation in proliferating and quiescent cells 2.19
FMRP-associated MOV10 facilitates and antagonizes miRNA-mediated regulation 2.17
Direct identification of endogenous SMG6 targets and a preferred motif spanning SMG6 cleavage sites by parallel analysis of RNA ends in human cells 2.16
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 2.16
Single-cell transcription profiling in KS1 patient iPSCs and NPCs 2.13
Small-molecule targeting of brachyury transcription factor addiction in chordoma [rnaseq_sgrna] 2.13
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC) 2.11
SEUSS: A scalable screening platform to assess transcriptomic and fitness effects of transcription factor overexpression 2.1
Polyol pathway links glucose metabolism to the aggressiveness of cancer cells 2.1
Stem and effector CD8 T-cells from human cancers 2.09
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 2.09
RNA-seq after siRNA targeting DDX24 applied to iHUVECs cell lines 2.09
Nickel exposure induces persistent mesenchymal phenotype in human lung epithelial cells through epigenetic activation of ZEB1 2.08
Dnmt3a and Dnmt3b associate with enhancers to regulate human epidermal stem cell homeostasis 2.07
Transcriptome analysis of human immortilized astrocytes reprogrammed into dopaminergic neurons 2.06
HMGA2 Promotes Long-Term Engraftment and Myelo-Erythroid Differentiation of Human Hematopoietic Stem and Progenitor Cells 2.05
ARID1A is a critical regulator of luminal identity and therapeutic response in oestrogen receptor-positive breast cancer (RNA-Seq) 2.05
RNA-seq of human foreskin fibroblast cells lacking RB, p130, and p107 treated with doxorubicin. 2.02
A transcriptome-wide divergence in protein translation scales with LIN28B expression 2.02
Transcriptome sequencing after MAGOHB knockdown in MAGOH-deleted or non-deleted cancer cells 2.01
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 1.99
ERK potentiates transactivation and oncogenic function of ERG by phosphorylation induced dissociation of PRC2 complex 1.96
Definition of Natural Killer cell heterogeneity in humans and mice by high-throughput single-cell RNA sequencing 1.96
PRRX2 and HEY2 double knock-down facilitates ASCL1-induced neuron conversion in human dermal fibroblasts. 1.94
Translocation of dense granule effectors across the parasitophorous vacuole membrane in Toxoplasma-infected cells requires the activity of ROP17, a rhoptry protein kinase 1.94
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT, U0126, CYHX, ActD, EGF, FGF, or IGF and labelled with 4SU 1.94
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT and labelled with 4SU 1.94
mRNA Sequencing of Human PromoCells Using 3'-directed Digital Gene Expression (3'-DGE) Technique 1.93
Identification of transcription start sites for human A549 cell line using ReCappable-seq 1.9
Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells 1.89
mRNA gene expression profiling in a human AML cell line treated with small molecule inhibitors that impact different RNA polymerase transcription complexes, or their combination, in comparison to a global DNA-damaging anthracycline compound 1.89
B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis 1.88
Genome-wide expression analysis of human hTert immortalized fibroblasts after donwregulation of MCM7 1.88
RNA Missplicing in Fuchs Endothelial Corneal Dystrophy 1.87
Integration of genome-wide DNA methylome and transcriptome of human intestinal fibroblasts reveals novel candidate gene signatures in Crohn’s disease-associated fibrosis 1.86
Comparative Analysis of Cas9 Activators Across Multiple Species 1.85
The RNA exosome nuclease complex regulates human embryonic stem cell differentiation [RNA-Seq rescue_SS] 1.82
High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq 1.81
CDK12 catalytic activity is rate-limiting for RNAPII processivity on core DNA replication genes and G1/S progression (3' RNA) 1.8
Transcriptome-wide identification of splicing defects upon XAB2 knockdown 1.78
CRISPR adenine and cytosine base editors with reduced RNA off-target activities 1.75
CRISPR adenine and cytosine base editors with reduced RNA off-target activities [CBE] 1.75
The m 6 A-methylase complex recruits TREX and regulates mRNA export. 1.74
RNA-seq analysis of BAP1-depleted uveal melanoma cells 1.72
RC3H1 posttranscriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-kB pathway 1.72
RC3H1 posttranscriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-kB pathway [RNA-Seq] 1.72
Similarity of therapeutic networks induced by a multi-component herbal remedy in neurovascular unit cells 1.7
Defining the Transcriptional Landscape during Cytomegalovirus Latency with Single-Cell RNA Sequencing 1.7
Simultaneous and systematic analysis of cellular and viral gene expression during Enterovirus 71-induced host shutoff 1.7
Treatment of prostate cancer cells with S-adenosylmethionine leads to genomewide alterations of transcription profiles 1.67
Transcriptional response to the HSP70 inhibitor MAL3-101 in parental rhabdomyosarcoma cells and isogenic acquired-resistance lines. 1.67
Single-cell analysis of adult human ovary using 10X genomics 1.67
Gene-Centric Functional Dissection of Human Genetic Variation Uncovers Regulators of Hematopoiesis 1.65
Translating transcriptome of cancer cells in situ in mesenchymal-rich tumor microenvironment 1.63
RNA-seq of naive and primed ES cells 1.6
HOXC6 affects the malignant phenotype of esophageal squamous cell carcinoma cells 1.6
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm 1.6
Neurotrophic Tyrosine Kinase Receptor 1 is Epigenetically Regulated by IL-13 and Contributes to Allergic Inflammation 1.59
The Molecular Dissection of the Oncogenic Role of ETS1 in the Mesenchymal Subtypes of Head and Neck Squamous Cell Carcinoma [RNA-seq Cell lines] 1.59
In Vitro and In Vivo Modulation of Alternative Splicing by the Biguanide Metformin. 1.58
ENCODE Cold Spring Harbor Labs Long RNA-seq 1.57
Gene expression in skeletal muscle in older individuals subject to ten days of complete bed rest. 1.56
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 1.53
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 1.53
MBNL1-dependent modulation of gene expression in MDA-MB-231 breast cancer cells 1.51
Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts 1.51
Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cells 1.51
TT-Seq captures the human transient transcriptome 1.49
Single-Cell Transcriptome Analysis of Lineage Diversity and Microenvironment in High-Grade Glioma 1.48
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis [Quant-Seq] 1.41
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis 1.41
KDM1A confers invasive and metastatic attributes in lung adenocarcinoma by modulating a non-canonical Integrin ß3-KRAS signaling pathway 1.41
RNASEQ Analysis of sh-TRC and sh-MIR100HG in the triplex negative breast cancer 1.4
TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. 1.4
Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq) 1.38
Ribosome profiling upon inhibition of eIF4A 1.38
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition. 1.38
Cooptation of tandem DNA repeats for the control of epithelial-to-mesenchymal transition [RNA-Seq] 1.38
Activin/Smad2-induced H3K27me3 reduction is crucial to initiate mesendoderm differentiation of ES Cells 1.34
ChIPseq and RNAseq analysis of T47D cells with/without silencing TRPS1/CHD4 1.33
Dissecting cell composition and cell-cell interaction network of normal human heart tissue by single-cell sequencing 1.33
FBXW7 modulates stress response by post-translational modification of HSF1 1.33
Transriptional profiling upon heat shock and recovery in cells deficient for FBXW7 and their wild type counterpart. 1.33
RNA-seq analysis upon ARID1B overexpression 1.3
polyA RNA Sequencing Analysis of HTR-8/SVneo cells after lnc-SLC4A1-1 overexpression 1.3
Gene expression profile of HGC27 gastric cancer cell p53 KO and KD 1.3
Wide-scale analysis of alternative polyadenylation (APA) associated with proliferation and transformation using 3'-Seq 1.3
Binding to SMN2 pre-mRNA-Protein complex elicits specificity for small molecule splicing modifiers 1.29
MARS Seq data from human cortical organoids 1.29
The bromodomain protein BRD4 regulates splicing during heat shock 1.29
Evidence for rRNA 2'-O-methylation plasticity: control of intrinsic translational capabilities of human ribosomes 1.28
Gene expression signatures of innate lymphoid cells from human blood 1.27
BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq] 1.27
BBBomics - Human Blood Brain Barrier Transcriptomics Hub 1.27
Effect of nuclear IL-33 on gene expression 1.27
Single-cell survey of human lymphatics unveils marked endothelial cell heterogeneity and mechanisms of homing for neutrophils 1.25
Investigation about Monocytes in metastatic breast cancer patients under chemotherapy +/- Avastin 1.22
single cell RNA-seq from GM12878 (ENCSR673UIY) 1.22
Gene expression analysis in U251 and U87 cells transduced with NANEP5 vector. 1.21
Selective Inhibition of the Second Bromodomain of BET Family Maintains Anti-Tumor Efficacy and Improves Tolerability 1.2
Selective Inhibition of the Second Bromodomain of BET Family Maintains Anti-Tumor Efficacy and Improves Tolerability (22RV1 RNA-seq) 1.2
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 1.19
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 1.19
Transcriptome-wide modulation of splicing by the exon junction complex 1.15
Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression [NALM6 RNA-Seq] 1.14
Human Treg NaCl stimulation 1.12
The cohesin complex prevents Myc-induced replication stress 1.12
RNAseq of ribosomal fractionation to assess the effect of CBFB on translation regulation 1.11
Structural basis for human respiratory syncytial virus NS1-mediated modulation of host responses 1.09
Genome-wide analysis of the Integrator complex 1.09
Genome-wide analysis of the Integrator complex (HTS) 1.09
The Wnt/β-catenin-signaling pathway is modulated by androgen ablation therapy for advanced clinical prostate cancer and contributes to androgen independent cell growth 1.08
Effect of Ro 08-2750 treatment on gene expression of human leukemia cell lines MOLM13 and K562 1.07
Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs 1.07
Functional significance of the HIV-1 Tat signature amino acid residues 1.07
Transcriptome analysis of human embryonic stem cells (hESCs) upon siRNA-mediated knockdown of hESC-essential genes 1.02
RNA editing in nascent RNA affects pre-mRNA splicing 1.02
Development of a selective CDK9 degrader from a multi-targeted CDK inhibitor [RNA-seq] 1.01
Development of a selective CDK9 degrader from a multi-targeted CDK inhibitor 1.01
Human Treg IL-12 stimulation 1.01
Effect of ILF3 on translation during homeostasis and the antiviral response 1.0
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis 1.0
KAP1 regulates ERVs in differentiated human cells and contributes to innate immune control 0.99
The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders 0.97
The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders [lnc-Nr2f1 overexpression] 0.97
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7 0.97
Histone deacetylase inhibition enhances antimicrobial peptide but not inflammatory cytokine expression upon bacterial challenge 0.95
Expression data for KDM1B knockdown in Glioma-Initiating Cells (GICs) 0.95
Genome wide association study of bone size yields eleven loci that also affect height, bone density, osteoarthritis and fractures 0.95
RNA-seq and Hi-C sequencing of neutrophil-like cells migrated through large or small pores 0.93
Migration through a small pore disrupts inactive chromatin organisation in neutrophil-like cells [RNA-seq] 0.93
Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [TMCC2] 0.89
Regulation of poly(A) tail and translation during the somatic cell cycle 0.89
Investigation into human Tra2 protein-dependent splicing in MDA-MB-231 cells using iCLIP and RNA-seq 0.88
SNHG5 siRNA knock down in HCT116 cells 0.88
Exploring ILF2 regulatory genes by next-generation sequencing 0.86
Interleukin-1β induces mitochondrial DAMP production to activate STING-dependent innate immune programs 0.85
An integrative network biology analysis identifies miR-508-3p as the determinant and a prognosis biomarker of the mesenchymal subtype ovarian cancer 0.85
Deletions in the ATAD3 gene cluster cause cerebellar developmental defects with mitochondrial DNA abnormalities owing to local cholesterol insufficiency 0.85
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection) 0.84
JUNB is a critical AP1 component for SMAD2/3 binding after TGFβ stimulation [RNA-seq] 0.82
SMAD2/3 are redirected to novel sites in MCF10A MII after prolonged TGFβ stimulation 0.82
Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HEK293 cells treated with or without TNF-alpha 0.81
Single-cell RNA-Seq Investigation of Foveal and Peripheral Expression in the Human Retina 0.8
Sorted MDMs with RFP+GFP+ or RFP+GFP- Mtb 0.8
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) 0.8
Transcriptomic analysis of senescent cells upon PTBP1 knockdown. 0.79
RNA-seq analysis in Cornea epithelial cells (CECs), skin epithelial cells (SECs), LSCs after knocking down PAX6 (3-D shPAX6 LSCs) and SESCs transduced with PAX6(3-D PAX6+ SESCs) upon 3-D differentiation 0.79
Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy 0.79
Transcriptome sequencing of K-562 cells 0.79
Tissue-specific RNA-seq in human evoked inflammation identifies novel blood and adipose lincRNA signatures of cardio-metabolic diseases 0.77
RNA-Seq and expression data from human adipose tissue 0.77
Transcriptomic analysis to functionally map the intrinsically disordered domain of EWS/FLI [Experiment 1] 0.75
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq] 0.75
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 0.75
Analysis of gene expression, motif and pattern of m6A modified region and m6A enrichment level in Ocular melanoma and Melanocyte cell lines. Gene expressin analysis of METTL3 knock down in PIG1, ALKBH5 knock down and HINT2 over expression in OCM1. 0.74
RNA-sequencing of mRNAs from control and CAP-D3 deficient Salmonella infected HT-29 cells 0.74
Modeling Human Cancer-induced Cachexia (Human) 0.72
Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B-cell Responses to Influenza Hemagglutinin 0.71
mRNA differential expression analysis in a human ex vivo model of chronic wounds 0.71
Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis 0.7
Next generation sequencing of the transcriptome in MCF-7 cells with/without SRA knockdown 0.69
Small-molecule targeting of brachyury transcription factor addiction in chordoma [rnaseq_compound] 0.69
High-resolution comparative analysis of great ape genomes 0.69
RNA-seq of IL-4 stimulated human keratinocytes 0.68
Genome-wide maps of WT and over-expressing CenH3/CENP-A in Human HeLa S3 cells 0.67
Pomalidomide inhibits PD-L1 induction to promote anti-tumor immunity 0.66
Expression levels of genes of NKG2C+ NK cells after in vitro treatment 0.66
Anaylsis of the effect of down-regulation of the EWS-FLI1 fusion protein in Ewing Sarcoma cells by RNA-seq. 0.65
Effect of low-dose sorafenib and alkylating agents in inflammation and angiogenesis in breast cancer 0.65
PolyA-sequencing in IMR-32 neuroblastoma cells with shRNA mediated depletion of CDK12, CDK13 or GFP. 0.65
RNA-Seq data of NCI-H82 cells expressing a Dox-On pRB (pTripZ RB1) grown in the presence or absence of DOX and then treated with vehicle or AZD2811. 0.59
SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF 0.59
Single-cell Transcriptomic Atlas of the Human Retina Identifies Cell Types Associated with Age-Related Macular Degeneration [Microfluidics] 0.59
A stably self-renewing adult blood-derived induced neural stem cell exhibiting patternability and epigenetic rejuvenation 0.59
Determining mRNA half-lives on a transcriptome-wide scale 0.59
ETS1 is a genome-wide effector of RAS/ERK signaling in epithelial cells (RNA-Seq) 0.58
ETS1 is a genome-wide effector of RAS/ERK signaling in epithelial cells 0.58
pSILAC mass spectrometry reveals ZFP91 as novel IMiD dependent substrate of the CRL4CRBN ligase 0.57
Exploring transcriptomic landscapes in red cell populations, in their extracellular vesicles and on single cell level 0.57
Ambient O2 pressure induces NF-kB1/RelA related inflammatory response in human lung epithelial cells in vitro 0.56
Paclitaxel plus Cirmtuzumab Achieves Greater Clearance of Patient-derived Xenografts By Targeting ROR1+ Breast Cancer Stem Cells 0.55
Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing 0.54
Gene expression analysis upon mtDNA depletion 0.54
Gene expression analysis upon mtDNA depletion [RNA-seq] 0.54
Hyperactive mTOR and MNK1 phosphorylation of eIF4E confer tamoxifen resistance and estrogen independence through selective mRNA translation reprogramming 0.53
Combined cistrome and transcriptome analysis of SKI in AML cells identifies SKI as a co-repressor for RUNX1 0.53
Transcriptome analysis of SKI knock-out in HL60 cells 0.53
Disease modelling of core pre-mRNA splicing factor haploinsufficiency 0.52
Drug combination of 17-AAG and Belinostat on MDA-MB-231 breast cancer cells 0.52
Profiling of protrusion-enriched RNAs from human breast cancer cell line MDA-MB-231 0.52
RNA-sequencing with micro-dissected boundary organoid into anterior, posterior, and boundary regions 0.51
Transcriptome of human ILC2s; primary vs IL-1b-primed 0.5
An atlas of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2 0.49
RNA-Seq of cKIT+ sorted cells from 53-137 day old fetal testes and ovaries and RNA-Seq of TRA-1-81+ H1 and UCLA1 hESCs. 0.48
cKIT+ sorted cells from 57-137 day old fetal testes and ovaries 0.48
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.48
m6A level and isoform characterization sequencing (m6A-LAIC-seq) reveal the census and complexity of the m6A epitranscriptome 0.48
Chromatin remodeling mediated by ARID1A is indispensable for normal hematopoiesis in mice (human RNA-Seq) 0.46
Histone demethylase LSD1 is required for germinal center formation and BCL6 driven lymphomagenesis 0.45
Transcriptional changes in lymphoma cells induced by LSD1 depletion 0.45
Vitamin C Promotes Apoptosis in Breast Cancer Cells by Increasing TRAIL Expression 0.44
Identification of biomarkers for amyotrophic lateral sclerosis by comprehensive analysis of exosomal mRNAs in human cerebrospinal fluid. 0.43
Single Cell RNASeq profiling of stromal vascular fraction from Subcutaneous and visceral adipose tissue 0.43
Comparative Transcriptomic Analysis of Hematopoietic System Across Species by Microwell-Seq 0.42
A cell-permeable stapled peptide inhibitor of the estrogen receptor/coactivator interaction 0.42
Hsa-miR-139-5p/HNRNPF axis modulates gene-transcripts balance in thyroid cancer cells 0.41
CRISPR-Cas9 based screen for p53-bound enhancers that function in oncogene-induced senescence 0.41
Homolog-selective degradation as a strategy to probe the function of CDK6 in AML 0.39
Transcriptome of diurnal human blood neutrophils 0.38
Methylation DNA mediated KLF4 binding activity in glioblastoma cells 0.37
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 0.37
Highly-motile versus unsorted MDA-MB-231 breast cancer cells 0.37
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (TLR perturbation Bulk RNA-Seq) 0.35
Microvesicle-mediated delivery of miR-1343: impact on markers of fibrosis 0.35
RNA-Seq of PRMT1 overexpression ECA109 cells 0.35
Maternal-biased H3K27me3 correlates with paternal-specific gene expression in the human morula 0.34
Human MAIT cells exit peripheral tissues and re-circulate via lymph in steady state conditions 0.34
Transcription factors and stress response gene alterations in human keratinocytes following Solar Simulated Ultra Violet Radiation 0.33
Human Treg IFNg/IL-10 subpopulations 0.33
An intramolecular salt bridge linking TDP43’s RNA recognition motifs dictates RNA binding, protein stability and TDP43-dependent neurodegeneration 0.32
SLAM-seq for K562 endogenous mRNA decay 0.31
Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells 0.31
Time series single-cell transcriptomic analysis of AEC2 directed differentiation 0.3
transcriptome studies of BRD4 inhibitor BDF-1253 on renal clear carcinoma 786-O cells 0.29
Gene expression profiles of PD1-high, PD1-intermediate, and PD1-negative tumor-infiltrating CD8 T cells in hepatocellular carcinoma 0.29
Function and hormonal regulation of GATA3 in human first trimester placentation 0.28
The secretome of skin cancer cells activates the mTOR/MYC pathway in healthy keratinocytes and converts them into tumorigenic cells 0.28
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 0.28
Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2 0.28
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells 0.27
The MEF2B Regulatory Network - RNA-seq data 0.27
The MEF2B Regulatory Network 0.27
m6A/m-Seq of human B-lymphocyte cell lines from healthy controls and major depressive disorder patients 0.23
The role of m6A/m-RNA methylation in stress response regulation 0.23
Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome 0.22
SREBP1 drives Keratin 80-dependent cytoskeletal changes and invasive behavior in endocrine resistant ERα breast cancer 0.21
DLX3-dependent p53 signaling network controls keratinocyte cell cycle and squamous tumor growth 0.2
DLX3 alters transcriptomic profile of adhesion, cell cycle, and cell death in Squamous Cell Carcinoma Cells 0.2
Effects of darunavir upon gene expression in kidney tubular cells after transduction with HIV or EGFP-control lentivirus 0.2
Effects of a nutritional supplement in older individuals subject to ten days of complete bed rest. 0.19
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 0.19
Exploiting Prmt5-orchestrated intron detention signatures to treat splicing-addicted malignant glioma tumors 0.19
RNA sequencing reveals transcriptional changes after Hippo signaling activation in podocytes 0.18
Platelet Transcriptome Profiling in HIV and ABCC4 as a Biomarker of Platelet Activity 0.18
The circadian transcriptional landscape in primary human mammary epithelial cells 0.16
TALEN-based knockout of mir-141 and mir-200c in SK-BR-3 cells 0.16
UPF1/SMG7-dependent MicroRNA-mediated Gene Regulation 0.16
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling (mRNA) 0.16
Virus-like vesicles of Kaposi’s Sarcoma-Associated Herpesvirus activate lytic replication through triggering differentiation signaling 0.16
Differentiation of Induced Pluripotent Stem Cells towards Mesenchymal Stromal Cells is Hampered by Culture in 3D Hydrogels [RNA-Seq] 0.15
Differentiation of Induced Pluripotent Stem Cells towards Mesenchymal Stromal Cells is Hampered by Culture in 3D Hydrogels 0.15
Metabolism as an early predictor of DPSCs aging 0.15
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates 0.14
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates [RNA-seq] 0.14
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq) 0.14
Profiling of escape kinetics of viruses subjected to RNAi 0.11
Identification of a unique gene expression signature in mercury and 2,3,7,8-tetrachlorodibenzo-p-dioxin co-exposed cells 0.1
Transcriptome analysis in a radiosensitive and a radioresistant cell line after ionizing radiation 0.1
Identification of a LIF-responsive replication-competent human β cell 0.09
Global gene expression profile of human peripheral blood-derived endothelial colony-forming cells is similar to coronary artery and umbilical vein endothelial cells 0.08
RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets 0.08
A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex (RNA-Seq I) 0.08
Oxaliplatin resistance is enhanced by saracatinib via upregulation of ABCG1 and Wnt/β-catenin signaling in hepatocellular carcinoma 0.06
Transcriptomic analysis of the effect of histone H4 K31R mutation in U2OS cells 0.06
Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs 0.05
DNMT1-associated long non-coding RNA regulate global gene expression and DNA methylation in colon cancer 0.04
Estrogen response in breast cancer cell line MCF-7 is dependent on NR2F2 [RNA-seq] 0.04
NR2F2 study 0.04
4sUDRB-seq: measuring transcription elongation and initiation genomewide 0.04
Neutrophils RNAseq from Generalised Pustular Psoriasis patients and healthy individuals 0.03
Evaluating and comparing the Transcriptome of (human) Hek 293 based cells, expressing either CHD3 or CHD4 0.03
Comparative gene expression profiling of human primary endotheliocytes cultivated on polyurethane-based electrospun 3D matrices and natural decellularized vein 0.03
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export 0.02
Targeting Spt5-Pol II small-molecule inhibitors uncouple distinct activities and reveal additional regulatory roles 0.01


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