Gene Query: TPT1

Dataset Description Geneva Score
Efficient and quantitative high-throughput tRNA sequencing 121.65
Identification of miRNA signatures during the differentiation of hESCs into retinal pigment epithelial cells 91.35
Effects of Cardiac Glycosides on RNA Expression in Prostate Cancer LNCaP-abl Cells 75.87
Genome-wide MAF1-dependent regulation of RNA polymerase III transcription [RNA-Seq] 69.54
Genome-wide MAF1-dependent regulation of RNA polymerase III transcription 69.54
Virus Mimicry in the Tumor Microenvironment Activates RIG-I Through Unshielding of Endogenous RNA in Exosomes [RNA-Seq] 49.75
Circular RNA expression signature of low-glucose-treated MIA PaCa-2 cells 49.07
Role of microRNAs in the interaction between Salmonella and the host cell 42.03
A radiolabeling-free, qPCR-based method for locus-specific pseudouridine detection 37.15
Apoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs 24.67
Wide-spread disruption of transcription termination in HSV-1 infection: Next-generation sequencing of translational activityd by ribosome profiling 23.6
Recovery and analysis of nascent RNA 20.97
The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains 20.97
RIG-I and MDA5 fRIP during KSHV lytic reactivation 20.37
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq) 19.64
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages 19.64
LINC00520 is Induced by Src, STAT3, and PI3K and Plays a Functional Role in Breast Cancer 18.79
The stress granule transcriptome reveals principles of mRNA accumulation in stress granules. 17.86
Evaluation of the effectiveness of semen collection and sperm purification methods for spermatozoa transcript profiling 16.94
Characterization of the Merkel cell carcinoma miRNome 16.93
Comparison of microRNA Profiling Platforms 16.63
Comparison of microRNA Profiling Platforms (HTS) 16.63
Evaluation of RNA amplification and RNA-Seq library preparation protocols for spermatozoa RNA profiling 15.9
Characterization of transcriptomics landscape in HUVEC cells exposed to oxidative stress 15.77
Cellular recruitment by podocyte-derived pro-migratory factors in assembly of the human renal filter 13.78
A Brain Penetrant Mutant IDH1 Inhibitor Provides In Vivo Survival Benefit 13.53
Transcriptomic insights into human decidual and peripheral blood CD8 T cells 13.52
Global analysis of enhancer targets: Mosaic-seq 13.48
Ribo_seq (aka ribosome profiling) analysis of control and Myc-induced U2OS cells 12.74
Transcriptomic profiling of O-GlcNAcylated mRNA-protein complexes by using OG-CLAP in HeLa cells. 12.71
Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq 12.63
Subclonal cooperation drives metastasis through modulating local and systemic immune microenvironments 12.49
High-throughput RNA sequencing on circular RNA profiles of human bladder cancer tissues and normal bladder tissues 12.48
Low-Cell-Number, Single-Tube Amplification (STA) of RNAs Revealed miRNA Changes from Pluripotency to Endothelium 12.43
Differential expression of long non‑coding RNA and mRNA in children with Henoch‑Schönlein purpura nephritis 12.32
Ribosomal footprinting of CN34-Parental and CN34-LM1a 12.3
Detection of internal N7-methylguanosine (m7G) RNA modifications by mutational profiling sequencing 11.63
3’ Uridylation Expands miRNA Target Repertoire 11.14
Ribosomal footprinting of MDA-Parental and MDA-LM2 10.84
Human co-transcriptional splicing kinetics and coordination revealed by direct nascent RNA sequencing 10.83
Transcriptomic profiling of HeLa cells infected with Salmonella Typhimurium 10.52
Codon usage optimization in pluripotent embryonic stem cells [RNA-seq] 10.21
Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24 10.16
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs [GRO-seq II] 10.14
The mRNA expression analysis of psoriasis skin lesion mesenchymal stem cell 10.06
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing 9.71
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing [RNA-Seq] 9.71
Large-scale profiling of intracellular signalling pathway activation reveals major distinctions between airway smooth muscle cells of asthmatics and non-asthmatics. 9.58
Transcriptomics analysis of human jejunal enteroendocrine cells after vertical sleeve gastrectomy 9.39
Transcriptomics analysis of enteroendocrine cells following vertical sleeve gastrectomy 9.39
Characterization of sperm lncRNA and its differently expression in the sperm of asthenozoospermic patients 9.03
RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program 9.01
RUNX1 mutations lead to a myeloid differentiation block by altering the RUNX1 transcriptional program (RNA-Seq) 9.01
CROP-Seq in Primary Human T Cells 8.85
Argonaute proteins couple chromatin silencing to alternative splicing (RNA IP-Seq) 8.83
Argonaute proteins couple chromatin silencing to alternative splicing 8.83
Ultracentifugation and nanoscale deterministic lateral displacement (nanoDLD) of samples for exRNA analysis 8.53
Cellular gene expression during Hepatitis C Virus replication revealed by Ribosome profiling 8.48
The transcriptomic landscape of MAIT cell development in the thymus (C006 RNAseq data set) 8.43
The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion 8.33
ENPP1 Mutation Causes Recessive Cole Disease by Altering Melanogenesis 8.24
Pain-driven transcriptome changes in synovium of knee osteoarthritis patients 7.98
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (human 3' mRNA-seq) 7.94
Profiling in vivo Bone Lesion (IVBL) and Orthotopic tumors by Next Generation Sequencing 7.79
Human neutrophil genome during PMA- and E. coli encounter-induced activation 7.78
RNA-seq profiling of the human neutrophil genome during PMA- and E. coli encounter-induced activation 7.78
Expression profile and potential functions of circulating long noncoding RNAs in acute ischemic stroke in the Southern Chinese Han population 7.49
EIF1AX-A113 splice and RAS mutations cooperate to drive thyroid tumorigenesis through ATF4 and c-MYC 7.45
Arginine citrullination at the C-terminal domain controls RNA Polymerase II transcription 7.35
T47D RNA-seq and ChrRNA-seq data 7.35
RNA-seq of SOX5 overexpressing primary human neuronal progenitors 7.35
Differences in miRNA Detection Levels are Technology and Sequence Dependent [NGS] 7.24
Differences in miRNA Detection Levels are Technology and Sequence Dependent 7.24
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing 6.85
Determination of tRNA aminoacylation levels by high throughput sequencing 6.78
RNA-Seq of over-expression and knockdown of the lncRNA SLNCR1 in melanoma cells 6.74
circRNA profile in hypopharyngeal cancer 6.68
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 1: RNA-seq) 6.67
Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions 6.54
mTORC1 balances cellular amino acid supply with demand for protein synthesis through post-transcriptional control of ATF4 6.51
Exploring the RNA landscape of endothelial exosomes 6.39
METTL3 and WTAP 6.17
Base-resolution mapping reveals distinct classes of N1-methyladenosine methylome in nuclear- and mitochondrial-encoded transcripts 6.09
Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles 6.02
An improved method for circular RNA purification that efficiently removes linear RNAs containing G-quadruplexes or structured 3’ ends 5.97
Genome-wide maps of H3K36me3 in ccRCC and RNA-seq of matched nephrectomy samples 5.79
RNA sequencing of matched nephrectomy samples [RNA-seq] 5.79
Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma 5.75
RNA-dependent RNA polymerase sequence specificities of capsnatching viruses are tailored to aid viral replication 5.67
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq] 5.52
Role of XRN2 ribonucleolytic activity in RNA metabolism 5.51
RNA-seq analysis of melanoma and carcinoma cells expressing FOXQ1 5.49
Co-transcriptional loading of RNA export factors shapes the human transcriptome 5.46
RNAseq of HEK293 cells after Chtop knockdown 5.46
circRNA-sequencing 5.17
MicroRNA-mediated suppression of the TGF-β pathway confers transmissible and reversible CDK4/6 inhibitor resistance (RNA-Seq) 5.13
MicroRNA-mediated suppression of the TGF-β pathway confers transmissible and reversible CDK4/6 inhibitor resistance 5.13
Transcriptomic Analysis Of circRNAs/miRNAs/mRNAs upon Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection 5.09
Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing 5.07
Influenza Vaccination Primes Human Myeloid Cell Cytokine Secretion and Natural Killer Cell Function 5.05
Profiling and bioinformatics analyses reveal differential expression of circular RNA in tongue cancer revealed by high-throughput sequencing 4.98
Genome-wide discovery of human splicing branchpoints [RNAse] 4.93
mRNA expression in iPS cells generated by a synthetic self-replicative RNA 4.89
NET-CAGE Characterizes the Dynamics and Topology of Human Transcribed Cis-regulatory Elements 4.81
Trans-differentiation of human adult peripheral blood T cells into neurons 4.79
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid 4.61
Clonally expanded CD8 T cells patrol Alzheimer's cerebrospinal fluid [TEMRA] 4.61
RNA polymerase in pre-B-ALL cell lines 4.58
Differential expression of genes in HCMV-infected fibroblasts regulated by the purinergic receptor P2Y2. 4.53
Alteration of the microRNA network during the progression of Alzheimer’s disease 4.47
Thyroid State Regulates Gene Expression in Human Whole Blood Cells 4.44
Role of cervicovaginal microbiota in genital inflammation 4.32
RNA-seq analysis of umbilical cord blood cells upon knockdown of NAP1L3 4.28
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP 4.19
MicroRNA Marker Based Prognostication of Oral Squamous Cell Carcinoma 3.99
Comprehensive RNA-Seq profiling in PBMCs of ALS patients and healthy controls 3.96
RNA-Seq profiling in PBMCs and spinal cord from ALS patients and healthy controls 3.96
Transcriptional Targeting Of Oncogene Addiction In Medullary Thyroid Cancer 3.92
Transcriptional Targeting Of Oncogene Addiction In Medullary Thyroid Cancer [RNA-Seq] 3.92
RNA-Seq with and without RNase treatment in PCa cell lines 3.88
Next generation sequencing identifies discrete classes of box C/D snoRNAs featuring different ends and RNA binding protein dependency 3.86
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing 3.78
Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines 3.69
Genome-wide discovery of human splicing branchpoints 3.67
MYC dependent mRNA translation shapes gene expression and cell biology 3.59
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [adult tissues] 3.55
Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing (Total RNA sequencing) 3.54
Next Generation Sequencing of Transcriptomes of Cutaneous Melanocytes and Metastatic Melanoma Cell Lines (mRNA-Seq) 3.52
Next Generation Sequencing of Transcriptomes of Cutaneous Melanocytes and Metastatic Melanoma Cell Lines 3.52
Loss of Function Mutations in ETS2 Repressor Factor (ERF) Reveal a Balance Between Positive and Negative ETS Factors Controlling Prostate Oncogenesis [22PC RNA-seq] 3.47
Molecular Pathology of adverse local tissue reaction caused by metal-on-metal implants 3.45
To investigate the decay constants (half-lives) of transcript isoforms generated by alternative polyadenylation in proliferating and quiescent cells 3.43
Identification of renal resident macrophages across species 3.37
Mitochondrial dsRNA triggers antiviral signalling in humans 3.27
Radiation enhances melanoma response to immunotherapeutic and synergizes with benzodiazepines to promote improved anti-tumor activity 3.25
RNA sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining 3.24
CD95/Fas ligand mRNA is toxic to cells 3.22
RNA m5C Methylation in breast cancer using MeRIP-Seq 3.22
MLL-AF4 Spreading Identifies Binding Sites that Are Distinct from Super-Enhancers and that Govern Sensitivity to DOT1L Inhibition in Leukemia. 3.21
Sensing self and nonself circular RNAs 3.17
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq) 3.12
RNAseq in Alzheimer's Disease patients 3.09
TOP2B disturbed the quality of human oocytes with advanced maternal age 3.09
Global response to chemotherapy-induced apoptosis 3.08
Dynamic gene expression in T-ALL following treatment and release of gamma-secretase inhibition [GRO-Seq] 3.06
Transcriptome of diurnal human blood neutrophils 3.06
CDK4/6 inhibitors target SMARCA4-determined cyclin D1 deficiency in hypercalcemic small cell carcinoma of the ovary (I) 3.05
Reassessment of Exosome Composition 3.02
Identification of transcription start sites for human A549 cell line using ReCappable-seq 3.01
Mitochondrial hypoxic stress induces RNA editing by APOBEC3G in lymphocytes 2.97
Sorted MDMs with RFP+GFP+ or RFP+GFP- Mtb 2.93
Gene expression and 4sUDRB-seq for NF90/NF110 of human scramble and KD HeLa cells. 2.76
RNA profiling Analysis of the Serum Exosomes Derived from Active and Latent M.tuberculosis infectious Patients 2.75
Ribosome queuing enables non-AUG translation to be resistant to multiple protein synthesis inhibitors 2.74
RNA transcriptome analysis during HSV-1 infection 2.68
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) of BJ cells treated with Nutlin-3a, an MDM2 inhibitor, which induces p53. 2.68
Human serum and heparin-free platelet lysate as appropriate xeno-free alternatives for production of human MuStem cell batches 2.65
NRDE2 negatively regulates nuclear exosome functions 2.63
Nascent RNA Sequencing after NMYC activation in SH-EP MYCNER cells 2.6
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues 2.58
mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues (sequencing) 2.58
Identification of renal resident macrophages across species [C1] 2.55
Transcription elongation regulates genome 3D structure 2.46
Landscape and variation of RNA secondary structure across the human transcriptome 2.42
Sex differences in transcriptomic profiles in aged kidney cells of renin lineage 2.36
An optimization system for isolating and sequencing of single human colon cancer cells 2.36
ADAR1-editing in HeLa, p150-KO and ADAR1-KO transcriptomes 2.34
ADAR1-editing of cellular and measles virus-derived duplex RNA 2.34
Systematic discovery of endogenous human ribonucleoprotein complexes 2.33
High-resolution comparative analysis of great ape genomes 2.32
Genome-wide view of the impact of Spt5-Pol II inhibitors (SPIs) on mRNA levels [RNA-Seq 24h] 2.31
RNA-sequencing of Wnt-dependent and Wnt-independent of Glioblastoma stem cell cultures 2.3
Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 2.25
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation 2.25
H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT] 2.25
Prediction of bacterial infection outcome using single cell RNA-seq analysis of human immune cells [sorted population Bulk RNA-seq] 2.2
Genome-wide identification of cancer-specific alternative splicing in circRNA 2.14
Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence 2.12
Measure transcript integrity using RNA-seq data 2.07
A compendium of promoter-centered long-range chromatin interactions in diverse human tissues and cell types 2.05
Myc activation coordinates gene transcription and protein translation responses 2.04
HITS-CLIP analysis uncovers a link between the Kaposi's sarcoma associated herpesvirus ORF57 protein and host pre-mRNA metabolism 2.03
Genome wide mapping of polyadenylation sites in proliferating and contact-inhibited cells and cells with knockdown of cleavage and polyadenylation factors 2.03
Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses (Experiment 2: scRNA-seq) 2.0
Canonical poly(A) polymerase activity promotes the decay of a wide variety of mammalian nuclear RNAs 1.99
Kidney compartment specific eQTL studies highlight causal genes and pathways for renal disease development 1.98
Comparative transcriptomic analysis of human and Drosophila extracellular vesicles reveals extensive conservation 1.94
Integrating single-cell transcriptomic data across different conditions, technologies, and species 1.92
ETS family proteins bind glucocorticoid receptor: relevance for treatment of Ewing sarcoma 1.9
FUS mutant human motoneurons transcriptome analysis reveals altered pathways and impairment of microRNA function 1.83
Novel Targeting of Transcription and Metabolism in Glioblastoma 1.82
Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells 1.79
Transcriptomic responses to Ivacaftor and prediction of Ivacaftor clinical responsiveness 1.73
Opposing Effects of Cyclooxygenase-2 (COX-2) on Estrogen Receptor β (ERβ) Response to 5α-reductase Inhibition in Prostate Epithelial Cells 1.7
Widespread Transcription beyond mRNA 3’ Ends Yields Abundant Regulatory RNAs 1.67
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability 1.66
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq] 1.66
Transcriptome analysis of human immortilized astrocytes reprogrammed into dopaminergic neurons 1.66
Cooperation of GRSF1 and the mitochondrial degradosome (hSuv3-PNPase complex) in degradation of mitochondrial RNA 1.64
Determining mRNA half-lives on a transcriptome-wide scale 1.63
Single-cell RNA-seq reveals differentiation of bona fide human pDCs and cDC1s in cultures of cord blood CD34+ progenitors, and a newly identified terminal differentiation step of cDC1s 1.61
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer 1.58
Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide 1.57
Non-transmissible measles virus vector with segmented RNA genome establishes different types of iPSCs from hematopoietic cells 1.53
Distinct regulation of alternative polyadenylation and gene expression by nuclear poly(A) polymerases 1.5
Landscapes of gene translation in hepatocellular carcinoma tumors revealed by ribosome profiling 1.49
Sequencing of freshly produced RNA following exposure of cells to DNA damage-inducing UV mimetic 4-hydroxyaminoquinolone (4-NQO) 1.47
Nm-seq finds thousands of modified 2’-O-methylation sites in mRNA with base precision 1.44
Codon usage optimization in pluripotent embryonic stem cells [tRNA sequencing] 1.39
mRNA sequencing of the mouse and human Hep-Orgs, Chol-Orgs and primary hepatocytes 1.38
Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes 1.37
Transcriptome analysis of fetal Klinefelter testis tissue samples compared to controls 1.36
DHX15 regulates CMTR1-dependent gene expression and cell proliferation 1.36
Next Generation Sequencing of isolated EGFR+ and HLA-G+ first trimester human trophoblasts 1.36
LncRNA-dependent mechanisms of androgen receptor-regulated gene activation programs 1.36
Tracing transcriptome profiles of human oocyte cultured by growth hormone or not in vitro by single cell RNA-seq 1.34
Human bone marrow resident natural killer cells have a unique transcriptional profile and resemble resident memory CD8+ T cells 1.3
Transcriptome profile of ATP7B KO cells and WT cells treated with Copper (Cu) to study Autophagy as a pro-survival mechanism in Wilson disease 1.3
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer 1.28
Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling 1.26
Neutrophils in systemic onset Juvenile Idiopathic Arthritis display sepsis-like features which can be reverted by IL-1 blockade 1.25
Microprocessor mediates transcription termination in long noncoding microRNA genes 1.18
RNA-seq of exosomes identifies lncRNA profiles that distinguish early-stage esophageal squamous cell carcinoma (ESCC) from non-malignant esophagitis 1.18
circRNA-sequencing 1.16
Hypoxic regulation of transcription in HUVEC is mediated by EPAS1 1.16
Targeting EZH2 in MYCN-amplified Neuroblastoma [RNA-seq] 1.16
Targeting EZH2 in MYCN-amplified Neuroblastoma 1.16
Global Transcriptional analysis of human spinal cord and neocortical neuroepithelial stem (NES) cells 1.16
Next generation sequencing of small RNAs isolated from exosomes in human semen 1.11
Metabolism as an early predictor of DPSCs aging 1.08
Club cells surviving influenza A virus infection induce temporary non-specific anti-viral immunity 1.07
Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation 1.05
Transcriptome-wide identification of transient RNA G-quadruplexes in human cells 1.03
Extracellular matrix hydrogel derived from decellularized tissues enables endoderm organoids culture 1.02
Proximity-CLIP provides a snapshot of occupied cis-acting elements on RNA in different subcellular compartments on a transcriptome-wide scale 1.01
C19ORF66 broadly escapes viral-induced endonuclease cleavage and restricts Kaposi’s Sarcoma Associated Herpesvirus (KSHV) 0.99
Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes 0.99
Selective roles of vertebrate PCF11 in premature and full-length transcript termination (chromatin-bound RNA-seq) 0.98
WNK1 kinase and the termination factor PCF11 connect nuclear mRNA export with transcription 0.95
IL-21/type I interferon interplay regulates neutrophil-dependent innate immune responses to Staphylococcus aureus 0.92
Identification of Atrial Fibrillation associated genes and functional non-coding variants 0.92
Comparative Analysis of the Transcriptome of Latent Autoimmune Diabetes (LADA) Patients from Eastern China 0.91
RNA-seq data of small cell carcinoma of the bladder (SCCB) /urothelial carcinoma (Non-SCCB) clinical samples, and bladder-PARCB cell lines 0.89
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq] 0.89
Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification 0.89
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction [III] 0.88
High-throughput sequencing of pluripotent cells 0.88
Enhancer activation during EGF response 0.86
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells 0.85
Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor [human RNA-seq] 0.84
Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor. 0.84
A single-cell transcriptome atlas of the human pancreas 0.83
Capturing the Interactome of Newly Transcribed RNA 0.82
Capturing the Interactome of Newly Transcribed RNA (RICK) 0.82
Antiviral and anti-inflammatory properties of novel anti-HIV candidate ABX464 promotes specifics RNA splicing while preserving cellular RNA integrity. 0.81
Human iPSC-based Modeling of Late-Onset Disease using Progerin-induced Aging 0.8
RNA-sequencing of highly pure synovial tissue macrophages reveals two distinct osteoarthritis subgroups that indicate different disease mechanisms. 0.8
Epigenome-wide analysis of DNA methylation in lung tissue shows concordance with blood studies and identifies tobacco smoke-inducible enhancers 0.79
Limiting cholesterol biosynthetic flux engages type I IFN signaling in a STING-dependent manner 0.79
nELAVL HITS-CLIP in Alzheimer's Disease patients 0.78
Profiling of circular RNAs in gastric cancer tissues and adjacent normal tissues 0.78
GIST cell cycle dysregulation is required for progression to high-risk disease but not for resistance to kinase inhibitors 0.77
MLL-AF4 binds directly to a BCL-2 specific enhancer and impacts H3K27 acetylation 0.73
RNA-seq melanoma 0.73
LINE-2 transposable elements are a source of functional human microRNAs and target sites 0.72
Comparative Transcriptomics of Triple Negative Breast Cancer Stem Cells and Differentiated Tumor Cells Identifies Teneurin-4 as a Potential Therapeutic Target 0.72
Transcriptome analysis of peripheral blood monocytes 0.72
Next Generation Sequencing Facilitates Quantitative Analysis of human patient derived primary Glioblastoma (GBM) cancer cell Transcriptomes 0.72
Highly-motile versus unsorted MDA-MB-231 breast cancer cells 0.7
Compare of gene expression between p16INK4A positive and negative regions of colon cancer from five patients 0.7
Differential Protein Occupancy Profiling of the mRNA Transcriptome 0.69
ZNF599 and DNMT3A coordinately control nuclear envelope organization by repression of SUN4 expression 0.69
Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection) 0.69
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer [RNA-Seq] 0.68
An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer 0.68
Gene Expression Profiling of SPOP Knocked Down Cell 0.68
UMI-count modeling and differential expression analysis for single-cell RNA sequencing 0.68
Diverse AR-V7 cistromes in castration-resistant prostate cancer are governed by HoxB13 0.67
The age and genomic integrity of neurons after cortical stroke in humans 0.65
MYT1 attenuates neuroblastoma cell differentiation by inhibiting retinoic acid signaling pathway 0.65
Induction of human hemogenesis in adult fibroblasts by defined factors and hematopoietic co-culture 0.65
Presence of NAD+-capped RNA in human cells: function and removal by the DXO deNADing Protein 0.65
Exogenous rescue of KLHL9 in SF210 cell line 0.64
The human blood-nerve barrier transcriptome 0.64
Platelet Transcriptome Profiling in HIV and ABCC4 as a Biomarker of Platelet Activity 0.63
Comprehensive Transcriptome Analysis of Cerebral Cavernous Malformation Across Multiple Species and Genotypes 0.63
A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development [BM low-input mRNA-seq] 0.62
RNA-seq of IL-4 stimulated human keratinocytes 0.61
Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis 0.61
Simultaneous profiling of sexually transmitted bacterial pathogens, microbiome, and concordant host response in cervical samples using whole transcriptome sequencing analysis 0.61
The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions 0.6
RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown 0.59
Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-thioguanisine 0.59
Profiling of escape kinetics of viruses subjected to RNAi 0.59
Control of prostate tumour growth by the long non-coding RNA GHSROS 0.58
RNA-Seq analysis of breast cancer cells after shikonin treatment 0.58
hMTR4 plays a central role in creating balanced nuclear RNA pools for degradation and export 0.57
Expansion of adult human pancreatic tissue yields organoids harbouring progenitor cells with endocrine differentiation potential 0.57
PTBP1 excludes UPF1 to protect long 3'UTRs from nonsense-mediated mRNA decay 0.57
12hr 5-FU treatment vs. DMSO in SJSA cells (from 'A kinase independent role for CDK19 in p53 response') 0.56
Identification of ZEB1-regulated gene expression changes in HCC827 human lung adenocarcinoma cells 0.55
Comparison of 7 small cell lung cancer PDX models, cultured ex vivo, for response to LSD1 inhibitor RG6016/ORY1001 0.54
Role of COP1 on MAP kinase transcriptional output in gastrointestinal stromal tumor 0.54
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity 0.53
Aortic Valve Tissue: Stenosis vs. Sclerosis 0.53
RNA-sequencing with micro-dissected boundary organoid into anterior, posterior, and boundary regions 0.52
Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma 0.52
DHX36 resolves G-rich structures in mRNA untranslated region to allow their translation [ChrRNA-seq] 0.52
Allelic expression mapping across cell lineages reveal repressor disruption among disease SNPs 0.52
Genetic regulation of human adipose microRNA expression and its consequences for metabolic traits 0.52
Subcellular RNA fractions of HSV-1 infected primary human fibroblasts 0.52
Comparative analysis of kidney organoid and adult human kidney single cell and single nucleus transcriptomes 0.51
Differential gene expression profiles in imatinib-resistant cell lines 0.51
JAK/STAT inhibition in macrophages promotes therapeutic resistance by inducing expression of protumorigenic factors 0.5
Transcriptomic characterization of a human in vitro model of arrhythmogenic cardiomyopathy under topological and mechanical stimuli 0.5
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) [RNA-seq] 0.48
Biomarkers of Cavernous Angioma with Symptomatic Hemorrhage (CASH) 0.48
Transcriptome analysis of kidney organoids 0.48
Browning of human adipocytes requires KLF11 and reprogramming of PPARγ super-enhancers 0.48
mRNA expression profile of Lymphocytes by high-throuput sequencing 0.47
Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment - 5' RNA sequencing and TCR sequencing 0.47
Function of HNRNPC in breast cancer cells by controlling the dsRNA-induced interferon response 0.47
Transcriptomic analysis of human tonsillar TFH subsets 0.47
Transcriptome analysis of immature and matured human oocytes from patients of young and advanced maternal age 0.47
Identification of microRNA-668 and microRNA-489 targets by RISC immunoprecipitation 0.46
Differential responses of human fetal brain neural stem cells to Zika virus infection 0.46
Functional Importance of eRNAs for Estrogen-dependent Gene Transcriptional Activation 0.46
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons [RNA-Seq] 0.46
Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons 0.46
The impact of stanniocalcin 1 on the transcriptome of human cord blood stem/progenitors 0.45
Flura-seq identifies organ-specific adaptations in metastasis-initiating cells 0.44
Comparison of small cell lung cancer PDX model FHSC04 for response to LSD1 inhibitor RG6016/ORY1001 0.44
circNFIB suppresses lymphatic metastasis of pancreatic cancer 0.44
RNA sequencing of human pancreatic cancer cell lines 0.43
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution 0.43
Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution [III] 0.43
A large panel of isogenic APP and PSEN1 mutant human iPSC neurons reveals shared endosomal abnormalities mediated by APP b-CTFs, not Ab [ribosome profiling] 0.43
Peripheral whole blood mRNAs and lncRNAs expression analysis in eosinophilic asthmatics 0.42
Single cell transcriptomics reveals new insights on the dynamical function of transcription factors during blood stem and progenitor cell formation 0.39
Single-cell RNAseq analysis of the empty and i8TF cell lines after 3 days of BL-CFC culture 0.39
RNA sequencing of prostate cancers reveal insights on the prognostic significance of visibility on multi-parametric MRI 0.37
RNA helicase A is necessary for KIF1Bβ tumor suppression in neuroblastoma 0.37
Monitoring Nivolumab binding as a method to clarify the residual therapeutic effects and to characterize the immune profile in antibody bound T cells in previously treated non-small cell lung cancer patients 0.37
Transcriptomic analysis of the HOTAIR-regulated genes 0.37
Human primary macrophages derived in vitro from circulating monocytes comprise adherent and non-adherent subsets with differential expression of Siglec-1 and CD4 and permissiveness to HIV-1 infection 0.36
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia 0.36
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [scRNA-seq] 0.36
High-throughput RNA sequencing on circular RNA profiles of human triple-negative breast cancer and adjacent normal tissues 0.35
Conversion of Human Fibroblasts to Stably Self-Renewing Neural Stem Cells with a Single Zinc-Finger Transcription Factor 0.35
Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remodeling by TALE- and CRISPR/Cas9-Based Transcription Factors 0.35
Transcriptome analysis of reticulated platelets reveals a prothrombotic profile 0.35
Transcriptome analysis of reticulated platelets reveals a prothrombotic profile [mRNA-Seq] 0.35
Transcriptome of U251 cells overexpression complement component 7 0.34
RNA-sequencing of tamoxifen-resistant and -sensitive breast cancer cell lines. 0.34
Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency 0.34
Transcriptome-wide discovery of microRNA binding sites in human brain by Ago2 HITS-CLIP [Ago2-miRNA-target mRNA complexes] 0.34
Integrated high-throughput screen to identify novel treatment leads for pediatric acute myeloid leukemia (AML) 0.34
ZEB1 insufficiency causes corneal endothelial cell state transition and altered cellular processing 0.33
CHCHD10 gene KO effect in iPSC drived motor neurons 0.33
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain [RNA-Seq] 0.33
Deciphering H3K4me3 Broad Domains Associated With Gene Regulatory Networks and Conserved Epigenomic Landscapes in the Human Brain 0.33
Programmable RNA N6-methyladenosine editing by CRISPR-Cas9 conjugates 0.32
Modeling Familial Cancer with iPSC Approaches 0.32
Enhancer Activation Requires Trans-Recruitment of a Mega Transcription Factor Complex 0.32
Enhancer Activation Requires Trans-Recruitment of a Mega Transcription Factor Complex (Gro-seq) 0.32
Transposon-based construction of strand-specific RNA-seq libraries 0.31
Apolipoprotein E4 Expression Causes Gain of Toxic Function in Isogenic Human Induced Pluripotent Stem Cell-Derived Endothelial Cells 0.31
An integrative analysis of non-coding regulatory DNA variations associated with autism 0.31
Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs 0.31
miR-155 plays a crucial role in ALS and is an immune therapeutic target [RNA-Seq] 0.3
Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice 0.3
Human Cactin interacts with DHX8 and SRRM2 to assure efficient pre-mRNA splicing and sister chromatid cohesion. 0.3
High-throughput sequencing of PROMPT-enriched samples. 0.3
RNA-Seq following PCR-based sorting reveals rare cell transcriptional signatures 0.3
GATA2 promotes hematopoietic development and represses cardiac differentiation of human mesoderm 0.3
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 4) 0.29
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates 0.29
Differential gene expression by suppression of either SOX2 or TP63 in KYSE70 human esophageal squamous carcinoma cell line. 0.29
Global Mapping of Human RNA-RNA Interactions 0.28
Analysis of active enhancers and direct androgen receptor target genes in VCaP prostate cancer cells 0.28
HEXIM1 is induced by DHODH inhibition to suppress melanoma [Gro-Seq] 0.28
HEXIM1 is induced by DHODH inhibition to suppress melanoma 0.28
MiR-CLIP capture of a miRNA targetome uncovers a lincRNA H19-miR-106a interaction 0.27
SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons 0.27
Expansion, in vivo-ex vivo cycling and genetic manipulation of primary human hepatocytes 0.27
Circular RNA profiling reveals the different distribution/characteristic and possible transport mechanism among the subcellular fractions 0.27
IL-10 dysregulation in acute mountain sickness revealed by transcriptome analysis 0.27
Widespread backtracking by RNA pol II is a major effector of gene activation, 5’ pause release, termination and transcription elongation rate 0.26
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug 0.25
Neuronal deletion of Gtf2i, associated with Williams syndrome, causes behavioural and myelin alterations rescuable by a remyelinating drug [human] 0.25
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.24
Integrative classification of human coding and non-coding genes based on RNA metabolism profiles 0.24
single cell RNA-seq from GM12878 (ENCSR673UIY) 0.23
RNA-seq and small RNA-seq from WT and ADAR1 knockdown H9 lines and their differentiation to specific types of neurons 0.23
RNASeq of mouse, human, and non-human primate primary dermal fibroblasts to poly(I:C) transfection 0.22
Transcriptome sequencing after MAGOHB knockdown in MAGOH-deleted or non-deleted cancer cells 0.22
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes (RNA-Seq) 0.22
Membrane Metallo-Endopeptidase (Neprilysin) Regulates Inflammatory Response and Insulin Signaling in White Preadipocytes 0.22
Effect of ILF3 depletion in HeLa cells on RNA steady state levels 0.21
RNA-seq profile of expanded human ST2-transduced Tregs cultured with IL-2 and TCR in the presence or absence of IL-33 0.21
Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors [Modifications - screen] 0.21
YTHDF1 Amplifies Wnt/β-Catenin Signaling to Promote Intestinal Stemness 0.2
Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the TBX2 Subfamily of Tumor Suppressor Genes 0.2
Identifying markers predicting successful graft outcome for clinical translation of hESC-based cell therapy for Parkinson’s disease 0.2
Transcriptomics profiling of Alzheimer’s disease reveal novel molecular targets 0.19
Dilated cardiomyopathy vs Myocarditis 0.19
MicroRNAs reinforce repression of PRC2 transcriptional targets independently and through a feed-forward regulatory network with PRC2 [RNA-seq] 0.19
MicroRNAs reinforce repression of PRC2 transcriptional targets independently and through a feed-forward regulatory network 0.19
Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 0.18
Human CD11b+ macrophages - Aging of hematopoietic stem cells is driven by regional specialization of marrow macrophages 0.18
Short-term effect of Boost versus Radical doses of Intraoperative electron Radiotherapy in breast cancer tumor bed using high-throughput approaches 0.18
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT, U0126, CYHX, ActD, EGF, FGF, or IGF and labelled with 4SU 0.18
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT and labelled with 4SU 0.18
Cutaneous Immunoprofile of Three Spotted Fever Group Rickettsiosis 0.17
Targets mediated microRNA arm-imbalance promotes gastric cancer progression [lncRNA] 0.17
RNA sequencing, chromatin accesibility and ChIP seq analysis of BAP1 -/- human liver organoids 0.16
Genome-wide DNA accessibility maps and differential gene expression using ChIP-seq, ATAC-seq and RNA-seq for the human secondary fibroblast cell line hiF-T and whole worms with and without knockdown of FACT complex 0.16
4sUDRB-seq: measuring transcription elongation and initiation genomewide 0.16
In vitro modeling of human germ cell development using pluripotent stem cells 0.16
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells [GRO-seq] 0.16
TNFα Signaling Exposes Latent Estrogen Receptor Binding Sites in Breast Cancer Cells 0.16
Ribosome profiling upon inhibition of eIF4A 0.15
Gene expression profiles of BxPC-3, MiaPaCa-2 and PANC-1 cell lines treated with DMSO and THZ1 respectively 0.15
System-wide profiling of RNA-binding proteins uncovers key regulators of virus infection 0.14
RNA-seq of human foreskin fibroblast cells lacking RB and/or p130 after doxorubicin treatment 0.14
Impact of Escherichia coli K12 and O18 on human platelets: effects on platelet activation, spliced platelet RNAs and proteins 0.14
Human Tfh cell RNA bulk sequencing 0.14
hMTR4 plays a central role in creating balanced nuclear RNA pools for degradation and export II 0.13
Transcriptome analysis upon C6orf203 silencing 0.13
C9/ALS Human Embryonic Stem Cells and C9/ALS Induced Pluripotent Stem Cells 0.13
Transcriptional changes during naturally-acquired ZIKA Virus infection render dendritic cells highly conducive to viral replication 0.13
Replication defective viral products exploit a cellular pro-survival mechanism to establish persistent infections 0.13
single cell RNA-seq from Purkinje cell (ENCSR888LYA) 0.12
Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA] 0.12
Global unleashing of transcription elongation waves in response to genotoxic stress restricts somatic mutation rate 0.12
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas [Human RNA-Seq] 0.12
H3.3K27M cooperates with p53 loss and Pdgfra gain in mouse embryonic neural progenitor cells to induce invasive high-grade gliomas 0.12
Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation 0.12
Defective structural RNA processing in relapsing-remitting multiple sclerosis 0.12
Transcriptomic Analysis of Endothelial Cells from Fibrovascular Membranes in Proliferative Diabetic Retinopathy 0.12
Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons 0.12
Solid phase chemistry to covalently and reversibly capture thiolated RNA 0.12
Profiling of lung tumor-infiltrating CD8 T cells according to their expression status of CD39 0.11
Retroviral Replicating Vectors Deliver Cytosine Deaminase Leading to Targeted 5-FU-Mediated Cytotoxicity in Multiple Human Cancer Types 0.11
Metastasis in triple-negative breast cancer 0.11
Functional and genomic characterization of a xenograft model system for the study of metastasis in triple-negative breast cancer. 0.11
Chromatin accessibility landscape upon induction of Msgn1, Pax3 and Myf5 in mesodermal cells and identification of conserved Pax3 binding sites and target genes during skeletal myogenesis 0.11
Loss of EGFR-DDEF1 signaling in metastatic and unresectable hepatoblastoma 0.11
Novel Transcriptional Activity and Extensive Allelic Imbalance in the Human MHC Region 0.11
The Small Molecule ISRIB Reverses the Effects of eIF2α Phosphorylation on Translation and Stress Granule Assembly 0.1
Transcriptome landscape of HeLa response upon triamcinolone acetonide 0.1
The pause-initiation limit restricts transcription activation in human cells 0.1
Gene expression of collecting duct carcinoma of the kidney 0.09
RNA-Seq analysis of human colorectal cancer with liver metastasis 0.09
Finding missing proteins from epigenetically manipulated human cells 0.09
RNA-seq of SCLC PDX models treated with EP 0.09
Global analyses of the effect of different cellular contexts on microRNA targeting 0.08
Global analyses of the effect of different cellular contexts on microRNA targeting (RNA-Seq) 0.08
Identification and validation of differentially expressed transcripts by RNA-Sequencing of formalin-fixed, paraffin-embedded (FFPE) lung tissue from patients with Idiopathic Pulmonary Fibrosis 0.08
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) in proliferation, quiescence, senescence and transformed states. 0.08
Interphase condensins regulate ligand-depedent enhancer activation (GRO-seq) 0.08
Interphase condensins regulate ligand-depedent enhancer activation 0.08
Expression analysis of the TAF1 syndrome 0.08
Longitudinal transcriptome profiling of post-treatment Lyme disease syndrome 0.08
Total RNAseq of human putamen and caudate nucleus tissues in healthy control and Bipolar Disorder individuals 0.08
Human pulmonary artery endothelial cells (hPAECs) with downregulated BMPR2 signaling demonstrate a unique gene expression signature after exposure to overexpression of AdAlox5 0.08
RNA-seq analysis of SLIRP knockdown with 1nM DHT in LNCaP cells 0.08
Structure and degradation of circular RNAs regulate PKR activation in innate immunity 0.08
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates 0.07
Genome-wide mapping of DROSHA cleavage sites on primary microRNAs and novel substrates [RNA-seq] 0.07
Antioxidant metabolism in activated CD8+ T cells regulates stem-like human memory T cell formation and anti-tumor immunity 0.06
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG 0.06
Stable oxidative cytosine modifications accumulate in cardiac mesenchymal cells from Type2 diabetes patients: rescue by alpha-ketoglutarate and TET-TDG functional reactivation [human cells RNA-seq] 0.06
Gene expression activation in CLL mediated by MSCs contact 0.05
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes 0.05
Targeting Spt5-Pol II small-molecule inhibitors uncouple distinct activities and reveal additional regulatory roles 0.04
RNAseq analysis of ruxolitinib treated breast cancers 0.03
Identification of the networks that regulate human monocytic myeloid-derived suppressor cell differentiation into inflammatory macrophages 0.03
siRNA-mediated knockdown 0.03
Illumina HiSeq Sequencing on Breast cancer PDX samples 0.03
tRNA modification landscape selectively controls mitochondrial translation efficiency in MERRF 0.03
RNA sequencing of prostate cancer and normal tissue from African Americans and European Americans 0.03
The mRNA export receptor NXF1 coordinates transcriptional dynamics, alternative polyadenylation and mRNA export 0.03
Transcriptomic profiling of cleavage-resistant RIPK1 induced autoinflammation syndrome patients 0.03
Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course 0.02
Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains 0.02
Triple vectors expand AAV transfer capacity in the retina 0.02
Comparative Analysis of Cas9 Activators Across Multiple Species 0.02
Regulators of cellular heterogeneity in basal-like breast cancer influence symmetric versus asymmetric division rates (shRNA targeting) 0.02
m6A/m-Seq of human B-lymphocyte cell lines from healthy controls and major depressive disorder patients 0.01
The role of m6A/m-RNA methylation in stress response regulation 0.01
Urinary sediment transcriptomic and longitudinal data to investigate renal function decline in type 1 diabetes 0.01
Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2 0.01
RNA-seq analysis of gene expression patterns during hESC neural differentiation 0.01
hESC neural differentiation 0.01
Expression of long non-coding RNAs in autoimmunity and linkage to enhancer function and autoimmune disease risk genetic variants 0.01
Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells 0.01
Transcriptomic profiling of sequential tumours from breast cancer patients provides a global view of metastatic expression changes following endocrine therapy 0.01
Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell RNA-seq 0.0
RNA sequencing with KSHV infection and enrichment for circular RNAs 0.0


Contact Us

For scientific and technical queries contact Butte Lab @UCSF


Cite GENEVA Tool

Manuscript in Preparation